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ONTOLOGY REPORT - ANNOTATIONS

Term:transcription elongation by RNA polymerase I
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Accession:GO:0006362 term browser browse the term
Definition:The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase I specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase I.
Synonyms:exact_synonym: RNA elongation from Pol I promoter;   transcription elongation from RNA polymerase I promoter
 related_synonym: RNA polymerase I transcription elongation factor activity;   transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript
 alt_id: GO:0001183


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transcription elongation by RNA polymerase I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23562818) Ensembl
MGI		 PMID:23562818 GO_REF:0000107 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (PMID:23562818) MGI PMID:23562818 NCBI chr 2:127,257,290...127,294,144
Ensembl chr 2:127,257,290...127,294,166 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23562818) Ensembl
MGI		 PMID:23562818 GO_REF:0000107 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23562818) Ensembl
MGI		 PMID:23562818 GO_REF:0000107 NCBI chr 6:158,168,350...158,199,344
Ensembl chr 6:158,168,350...158,199,344 		JBrowse link
G POLR1D RNA polymerase I and III subunit D involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:27,620,743...27,667,411
Ensembl chr13:27,620,742...27,744,237 		JBrowse link
G POLR1E RNA polymerase I subunit E involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:37,485,948...37,503,697
Ensembl chr 9:37,485,948...37,503,697 		JBrowse link
G POLR1F RNA polymerase I subunit F involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:19,695,461...19,709,037
Ensembl chr 7:19,695,461...19,709,037 		JBrowse link
G POLR2E RNA polymerase II, I and III subunit E involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:1,086,574...1,095,375
Ensembl chr19:1,086,574...1,095,380 		JBrowse link
G UBTF upstream binding transcription factor acts_upstream_of_or_within ISO (PMID:23562818) MGI PMID:23562818 NCBI chr17:44,205,040...44,221,304
Ensembl chr17:44,205,033...44,221,626 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19669
    metabolic process 12467
      organic substance metabolic process 11970
        macromolecule metabolic process 10249
          macromolecule biosynthetic process 8230
            RNA biosynthetic process 3702
              DNA-templated transcription elongation 146
                transcription elongation by RNA polymerase I 9
                  negative regulation of transcription elongation by RNA polymerase I 0
                  positive regulation of transcription elongation by RNA polymerase I 0
                  regulation of transcription elongation by RNA polymerase I + 0
Path 2
Term Annotations click to browse term
  biological_process 19669
    metabolic process 12467
      organic substance metabolic process 11970
        organic cyclic compound metabolic process 7071
          nucleobase-containing compound metabolic process 6541
            nucleic acid metabolic process 5937
              RNA metabolic process 5334
                RNA biosynthetic process 3702
                  DNA-templated transcription 3675
                    transcription by RNA polymerase I 77
                      nucleolar large rRNA transcription by RNA polymerase I 26
                        transcription elongation by RNA polymerase I 9
                          negative regulation of transcription elongation by RNA polymerase I 0
                          positive regulation of transcription elongation by RNA polymerase I 0
                          regulation of transcription elongation by RNA polymerase I + 0
paths to the root