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synaptic vesicle transport along microtubule - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic vesicle transport along microtubule
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Accession:GO:0099517 term browser browse the term
Definition:The directed movement of synaptic vesicles along microtubules within a cell, powered by molecular motors.

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show annotations for term's descendants           Sort by:
anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in IBA
ISO 		GO_REF:0000033
(PMID:21998198) 		GO_Central
RGD		 PMID:21998198 GO_REF:0000033 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 involved_in ISO (PMID:21998198) RGD PMID:21998198 NCBI chr 1:135,412,580...135,445,191
Ensembl chr 1:135,412,580...135,445,191 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:21998198) 		GO_Central
Ensembl
RGD		 PMID:21998198 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21998198) 		UniProt
RGD		 PMID:21998198 GO_REF:0000024 NCBI chr15:3,246,616...3,264,846
Ensembl chr15:3,246,926...3,264,844 		JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21998198)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21998198 GO_REF:0000024 GO_REF:0000107 NCBI chr16:69,217,526...69,237,372
Ensembl chr16:69,217,633...69,235,431 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 involved_in ISO (PMID:21998198) RGD PMID:21998198 NCBI chr18:39,462,728...39,531,622
Ensembl chr18:39,462,765...39,531,622 		JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 involved_in ISO
IEA 		(PMID:21998198)
GO_REF:0000107 		RGD
Ensembl		 PMID:21998198 GO_REF:0000107 NCBI chr 1:133,818,825...133,859,269
Ensembl chr 1:133,818,825...133,859,322 		JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21998198) 		UniProt
RGD		 PMID:21998198 GO_REF:0000024 NCBI chr 7:1,931,985...1,935,614
Ensembl chr 7:1,340,934...1,351,558 		JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21998198) 		UniProt
Ensembl
RGD		 PMID:21998198 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:243,024,611...243,031,749
Ensembl chr 1:243,024,614...243,031,653 		JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 involved_in ISO
IEA 		(PMID:21998198)
GO_REF:0000107 		RGD
Ensembl		 PMID:21998198 GO_REF:0000107 NCBI chr 1:79,155,873...79,158,247
Ensembl chr 1:79,155,693...79,158,505 		JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in ISO
IEA 		(PMID:21998198)
GO_REF:0000107 		RGD
Ensembl		 PMID:21998198 GO_REF:0000107 NCBI chr14:74,043,025...74,044,325
Ensembl chr14:74,043,015...74,044,531 		JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21998198) 		UniProt
RGD		 PMID:21998198 GO_REF:0000024 NCBI chr17:26,171,965...26,197,276
Ensembl chr17:26,172,018...26,197,251 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21998198) 		UniProt
Ensembl
RGD		 PMID:21998198 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in ISS
IEA
ISO
IBA 		GO_REF:0000024
GO_REF:0000107
(PMID:21998198)
GO_REF:0000033 		UniProt
Ensembl
RGD
GO_Central		 PMID:21998198 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661 		JBrowse link
G Kif1a kinesin family member 1A involved_in ISO (PMID:7539720) RGD PMID:7539720 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Kif1b kinesin family member 1B involved_in ISS
ISO 		GO_REF:0000024
(PMID:11389829) 		UniProt
RGD		 PMID:11389829 GO_REF:0000024 NCBI chr 5:159,607,697...159,742,778
Ensembl chr 5:159,561,271...159,742,778 		JBrowse link
G Madd MAP-kinase activating death domain involved_in ISO (PMID:18849981) RGD PMID:18849981 NCBI chr 3:77,114,330...77,157,865
Ensembl chr 3:77,114,314...77,157,701 		JBrowse link
G Snapin SNAP-associated protein involved_in ISS
ISO 		GO_REF:0000024
(PMID:21998198) 		UniProt
RGD		 PMID:21998198 GO_REF:0000024 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231 		JBrowse link
G Trim46 tripartite motif-containing 46 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:26671463) 		GO_Central
Ensembl
RGD		 PMID:26671463 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141 		JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 involved_in IMP PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr 1:202,399,416...202,405,110
Ensembl chr 1:202,399,419...202,405,089 		JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:167,458,640...167,543,556
Ensembl chr 4:167,473,177...167,540,993 		JBrowse link
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      synaptic vesicle transport 54
        synaptic vesicle cytoskeletal transport 22
          synaptic vesicle transport along microtubule 22
            anterograde synaptic vesicle transport + 22
            retrograde synaptic vesicle transport 0
Path 2
Term Annotations click to browse term
  biological_process 20543
    localization 5729
      establishment of localization 5079
        establishment of localization in cell 2163
          intracellular transport 1403
            cytoskeleton-dependent intracellular transport 209
              transport along microtubule 188
                organelle transport along microtubule 89
                  vesicle transport along microtubule 53
                    synaptic vesicle transport along microtubule 22
                      anterograde synaptic vesicle transport + 22
                      retrograde synaptic vesicle transport 0
paths to the root