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ONTOLOGY REPORT - ANNOTATIONS

Term:vesicle transport along microtubule
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Accession:GO:0047496 term browser browse the term
Definition:The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.
Synonyms:exact_synonym: microtubule-based vesicle localization


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vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bicdl1 BICD family like cargo adaptor 1 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:40,878,190...41,001,152
Ensembl chr12:40,876,884...40,966,130 		JBrowse link
G Bicdl2 BICD family like cargo adaptor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:12,691,610...12,700,049
Ensembl chr10:12,691,610...12,700,049 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:22261744) RGD PMID:22261744 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO
IDA
IEA		 (PMID:24561039)
PMID:14985359
GO_REF:0000107		 RGD
Ensembl		 PMID:24561039 PMID:14985359 GO_REF:0000107, RGD:8553555 NCBI chr 4:33,852,597...34,166,159
Ensembl chr 4:33,852,927...34,166,149 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:17,232,735...17,330,574
Ensembl chr10:17,227,181...17,330,571 		JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:15242649)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:15242649 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126 		JBrowse link
G Htt huntingtin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15242649)
(PMID:20515468)		 Ensembl
RGD		 PMID:15242649 PMID:20515468 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Kif5b kinesin family member 5B involved_in
acts_upstream_of_or_within		 ISO
IDA		 (PMID:28426968)
MGI:109596 (PMID:17360972)
PMID:14985359		 RGD PMID:17360972 PMID:28426968 PMID:14985359 RGD:8553555 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
G Kifc1 kinesin family member C1 acts_upstream_of_or_within ISO MGI:1098268 (PMID:17360972) RGD PMID:17360972 NCBI chr20:4,998,832...5,017,107
Ensembl chr20:4,999,047...5,017,105 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:109520|MGI:1932915 (PMID:16107726)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:16107726 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:839,788...883,946
Ensembl chr10:839,788...883,869 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:109520|MGI:1914453 (PMID:16107726)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:16107726 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1914453|MGI:1932915 (PMID:16107726)		 GO_Central
RGD		 PMID:16107726 GO_REF:0000033 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Prkcz protein kinase C, zeta IMP Slc10a1/Ntcp-containing early endosomes RGD PMID:16734659 RGD:1642664 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367 		JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in IMP
ISO		 PMID:21303926
(PMID:21303926)		 RGD PMID:21303926 PMID:21303926 RGD:8554665 NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2386261 (PMID:17190838)		 Ensembl
RGD		 PMID:17190838 GO_REF:0000107 NCBI chr 3:104,168,549...104,230,107
Ensembl chr 3:104,170,013...104,230,056 		JBrowse link
G Trak1 trafficking kinesin protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:120,984,445...121,139,357
Ensembl chr 8:120,984,431...121,139,367 		JBrowse link
G Trak2 trafficking kinesin protein 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:60,348,531...60,414,036
Ensembl chr 9:60,350,012...60,413,996 		JBrowse link
G Vamp7 vesicle-associated membrane protein 7 involved_in IDA PMID:22705394 UniProt PMID:22705394 RGD:10047362 NCBI chr12:16,728,486...16,764,261
Ensembl chr12:16,728,524...16,764,097 		JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Kif1b kinesin family member 1B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:159,607,697...159,742,778
Ensembl chr 5:159,561,271...159,742,778 		JBrowse link
G Kif1c kinesin family member 1C involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:55,414,412...55,444,587
Ensembl chr10:55,415,900...55,443,545 		JBrowse link
G Sybu syntabulin IMP RGD PMID:17611281 RGD:13217407 NCBI chr 7:75,847,000...75,948,919
Ensembl chr 7:75,847,003...75,948,828 		JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in ISO
IBA		 (MGI:5437407|PMID:21998198)
GO_REF:0000033		 RGD
GO_Central		 PMID:21998198 GO_REF:0000033 MGI:5437407 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 involved_in ISO (MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:5437407 NCBI chr 1:135,412,580...135,445,191
Ensembl chr 1:135,412,580...135,445,191 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in ISO
IBA		 (MGI:5437407|PMID:21998198)
GO_REF:0000033		 RGD
GO_Central		 PMID:21998198 GO_REF:0000033 MGI:5437407 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5437407|PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr15:3,246,616...3,264,846
Ensembl chr15:3,246,926...3,264,844 		JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5437407|PMID:21998198)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21998198 GO_REF:0000024 GO_REF:0000107 MGI:5437407 NCBI chr16:69,217,526...69,237,372
Ensembl chr16:69,217,633...69,235,431 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 involved_in ISO (MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:5437407 NCBI chr18:39,462,728...39,531,622
Ensembl chr18:39,462,765...39,531,622 		JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 involved_in ISO (MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:5437407 NCBI chr 1:133,818,825...133,859,269
Ensembl chr 1:133,818,825...133,859,322 		JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 involved_in ISO
ISS		 (MGI:5437407|PMID:21998198)
GO_REF:0000024		 RGD
UniProt		 PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr 7:1,347,495...1,351,103
Ensembl chr 7:1,340,934...1,351,558 		JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5437407|PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr 1:243,024,611...243,031,749
Ensembl chr 1:243,024,614...243,031,653 		JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 involved_in ISO (MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:5437407 NCBI chr 1:79,155,873...79,158,247
Ensembl chr 1:79,155,693...79,158,505 		JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in ISO (MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:5437407 NCBI chr14:74,043,025...74,044,325
Ensembl chr14:74,043,015...74,044,531 		JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5437407|PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr17:26,171,965...26,197,276
Ensembl chr17:26,172,018...26,197,251 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5437407|PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(MGI:5437407|PMID:21998198)		 UniProt
TreeGrafter
GO_Central
RGD		 PMID:21998198 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5437407 NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661 		JBrowse link
G Kif1a kinesin family member 1A involved_in ISO (PMID:7539720) RGD PMID:7539720 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Madd MAP-kinase activating death domain involved_in ISO (PMID:18849981) RGD PMID:18849981 NCBI chr 3:77,114,330...77,157,865
Ensembl chr 3:77,114,314...77,157,701 		JBrowse link
G Snapin SNAP-associated protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:5437407|PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231 		JBrowse link
G Trim46 tripartite motif-containing 46 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:26671463)
GO_REF:0000118
GO_REF:0000033		 Ensembl
RGD
TreeGrafter
GO_Central		 PMID:26671463 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141 		JBrowse link
G Trim54 tripartite motif-containing 54 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 6:25,239,340...25,258,511
Ensembl chr 6:25,239,340...25,258,511 		JBrowse link
minus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kifc1 kinesin family member C1 acts_upstream_of_or_within ISO (PMID:17360972) RGD PMID:17360972 NCBI chr20:4,998,832...5,017,107
Ensembl chr20:4,999,047...5,017,105 		JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 involved_in IMP PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr 1:202,399,416...202,405,110
Ensembl chr 1:202,399,419...202,405,089 		JBrowse link
plus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in ISO
IBA		 (PMID:20100911)
GO_REF:0000033		 RGD
GO_Central		 PMID:20100911 GO_REF:0000033 NCBI chr 8:123,412,105...123,479,315
Ensembl chr 8:123,412,112...123,479,021 		JBrowse link
G Kif13a kinesin family member 13A involved_in ISO (MGI:5142383|PMID:11106728) RGD PMID:11106728 MGI:5142383 NCBI chr17:17,766,597...17,948,517
Ensembl chr17:17,766,597...17,943,615 		JBrowse link
G Kif5b kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:17360972)		 Ensembl
RGD		 PMID:17360972 GO_REF:0000107 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Trim46 tripartite motif-containing 46 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141 		JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:167,458,640...167,543,556
Ensembl chr 4:167,473,177...167,540,993 		JBrowse link
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809 		JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stk11 serine/threonine kinase 11 involved_in ISO
IBA
IMP		 (PMID:24643070)
GO_REF:0000033
(MGI:5604606|PMID:24643070)		 RGD
GO_Central		 PMID:24643070 PMID:24643070 GO_REF:0000033 MGI:5604606, RGD:30309925 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315 		JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Kif1b kinesin family member 1B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:159,607,697...159,742,778
Ensembl chr 5:159,561,271...159,742,778 		JBrowse link
G Kif1c kinesin family member 1C involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:55,414,412...55,444,587
Ensembl chr10:55,415,900...55,443,545 		JBrowse link
G Kif5a kinesin family member 5A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Kif5b kinesin family member 5B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    localization 5719
      organelle localization 648
        establishment of organelle localization 495
          organelle transport along microtubule 87
            vesicle transport along microtubule 49
              anterograde neuronal dense core vesicle transport + 7
              minus-end-directed vesicle transport along microtubule 1
              negative regulation of vesicle transport along microtubule + 1
              plus-end-directed vesicle transport along microtubule + 3
              positive regulation of vesicle transport along microtubule + 5
              regulation of vesicle transport along microtubule + 6
              retrograde neuronal dense core vesicle transport + 6
              synaptic vesicle transport along microtubule + 22
Path 2
Term Annotations click to browse term
  biological_process 20292
    cellular process 18769
      cellular localization 3745
        establishment of localization in cell 2182
          intracellular transport 1443
            cytoskeleton-dependent intracellular transport 219
              transport along microtubule 188
                organelle transport along microtubule 87
                  vesicle transport along microtubule 49
                    anterograde neuronal dense core vesicle transport + 7
                    minus-end-directed vesicle transport along microtubule 1
                    negative regulation of vesicle transport along microtubule + 1
                    plus-end-directed vesicle transport along microtubule + 3
                    positive regulation of vesicle transport along microtubule + 5
                    regulation of vesicle transport along microtubule + 6
                    retrograde neuronal dense core vesicle transport + 6
                    synaptic vesicle transport along microtubule + 22
paths to the root