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protein transport along microtubule - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:protein transport along microtubule
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Accession:GO:0098840 term browser browse the term
Definition:The directed movement of a protein along a microtubule, mediated by motor proteins.
Synonyms:exact_synonym: microtubule-based protein transport

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show annotations for term's descendants           Sort by:
protein transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO
IEA		 (PMID:28860385)
GO_REF:0000107		 RGD
Ensembl		 PMID:28860385 GO_REF:0000107 NCBI chr12:6,440,959...6,464,582
Ensembl chr12:1,643,251...1,666,685 		JBrowse link
G Clip3 CAP-GLY domain containing linker protein 3 involved_in ISO
IEA
ISS		 (PMID:20052288)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20052288 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:94,674,492...94,690,643
Ensembl chr 1:85,547,206...85,563,184 		JBrowse link
G Kif1a kinesin family member 1A IDA RGD PMID:19338388 RGD:12914798 NCBI chr 9:101,010,447...101,094,891
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
anterograde axonal protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO UniProtKB:Q9QYR6 (PMID:26609151) RGD PMID:26609151 NCBI chr 1:153,864,545...155,916,238
Ensembl chr 1:144,451,472...146,499,475 		JBrowse link
G Hspb1 heat shock protein family B (small) member 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23728742)		 UniProt
Ensembl
RGD		 PMID:23728742 GO_REF:0000024 GO_REF:0000107 NCBI chr12:26,430,640...26,432,301
Ensembl chr12:20,794,028...20,795,743 		JBrowse link
G Kif5a kinesin family member 5A involved_in IMP PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Kif5b kinesin family member 5B involved_in IMP PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chr17:56,185,386...56,222,990
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
G Kif5c kinesin family member 5C involved_in IMP PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chr 3:54,441,266...54,591,630
Ensembl chr 3:34,032,105...34,182,413 		JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO UniProtKB:Q91XM9 (PMID:26609151) RGD PMID:26609151 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in IMP
ISO
IEA		 PMID:21775604
(PMID:28259553)
GO_REF:0000107		 RGD
Ensembl		 PMID:28259553 PMID:21775604 GO_REF:0000107, RGD:13673858 NCBI chr10:14,422,936...14,463,387
Ensembl chr10:13,918,400...13,958,273 		JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in IMP PMID:21775604 UniProt PMID:21775604 RGD:13673858 NCBI chr18:63,597,554...63,794,124
Ensembl chr18:63,600,937...63,757,180 		JBrowse link
anterograde axonal transport of neurotransmitter receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neto1 neuropilin and tolloid like 1 involved_in ISO
IEA		 (PMID:28680963)
GO_REF:0000107		 RGD
Ensembl		 PMID:28680963 GO_REF:0000107 NCBI chr18:79,635,633...79,753,913
Ensembl chr18:79,635,633...79,749,030 		JBrowse link
axo-dendritic protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo5a myosin VA IMP RGD PMID:24637809 RGD:11532780 NCBI chr 8:84,692,524...84,860,564
Ensembl chr 8:75,812,412...75,975,918 		JBrowse link
intramanchette transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep131 centrosomal protein 131 acts_upstream_of_or_within ISO
IEA		 MGI:3870375 (PMID:24415959)
GO_REF:0000107		 RGD
Ensembl		 PMID:24415959 GO_REF:0000107 NCBI chr10:105,844,433...105,868,811
Ensembl chr10:105,346,015...105,370,380 		JBrowse link
G Spag17 sperm associated antigen 17 involved_in ISO
IEA		 (PMID:29690537)
GO_REF:0000107		 RGD
Ensembl		 PMID:29690537 GO_REF:0000107 NCBI chr 2:187,264,004...187,511,061
Ensembl chr 2:187,264,009...187,510,501 		JBrowse link
positive regulation of axo-dendritic protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif3a kinesin family member 3a IMP RGD PMID:20694152 RGD:11060126 NCBI chr10:38,226,388...38,263,062
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
retrograde axonal protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO UniProtKB:Q9QYR6 (PMID:26609151) RGD PMID:26609151 NCBI chr 1:153,864,545...155,916,238
Ensembl chr 1:144,451,472...146,499,475 		JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO UniProtKB:Q91XM9 (PMID:26609151) RGD PMID:26609151 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      microtubule-based process 1092
        microtubule-based protein transport 16
          protein transport along microtubule 16
            axo-dendritic protein transport + 11
            intramanchette transport 2
            protein transport along microtubule to cell tip 0
            protein transport along microtubule to kinetochore 0
            protein transport along microtubule to spindle pole body + 0
Path 2
Term Annotations click to browse term
  biological_process 20567
    localization 5739
      macromolecule localization 3200
        cellular macromolecule localization 2734
          protein localization 2722
            establishment of protein localization 1808
              protein transport 1501
                intracellular protein transport 699
                  protein transport along microtubule 16
                    axo-dendritic protein transport + 11
                    intramanchette transport 2
                    protein transport along microtubule to cell tip 0
                    protein transport along microtubule to kinetochore 0
                    protein transport along microtubule to spindle pole body + 0
paths to the root