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Gene: Clip3 (CAP-GLY domain containing linker protein 3) Rattus norvegicus
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Symbol: Clip3
Name: CAP-GLY domain containing linker protein 3
Description: Predicted to have ganglioside binding activity and microtubule binding activity. Predicted to be involved in several processes, including negative regulation of microtubule polymerization; peptidyl-L-cysteine S-palmitoylation; and positive regulation of transport. Predicted to localize to several cellular components, including the endosome; membrane raft; and trans-Golgi network membrane. Orthologous to human CLIP3 (CAP-Gly domain containing linker protein 3); INTERACTS WITH bisphenol A; C60 fullerene; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CAP-Gly domain-containing linker protein 3; LOC308493; RGD1306245; similar to CLIP-170-related protein
Orthologs:
Homo sapiens (human) : CLIP3 (CAP-Gly domain containing linker protein 3)  HGNC  Alliance
Mus musculus (house mouse) : Clip3 (CAP-GLY domain containing linker protein 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clip3 (CAP-Gly domain containing linker protein 3)
Pan paniscus (bonobo/pygmy chimpanzee) : CLIP3 (CAP-Gly domain containing linker protein 3)
Canis lupus familiaris (dog) : CLIP3 (CAP-Gly domain containing linker protein 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clip3 (CAP-Gly domain containing linker protein 3)
Sus scrofa (pig) : CLIP3 (CAP-Gly domain containing linker protein 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0188,750,453 - 88,766,453 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0192,100,103 - 92,116,122 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4185,238,779 - 85,253,538 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1185,316,889 - 85,331,362 (+)NCBI
Celera179,921,058 - 79,935,799 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clip3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306245
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.