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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of mRNA splicing, via spliceosome
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Accession:GO:0048026 term browser browse the term
Definition:Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.
Synonyms:exact_synonym: positive regulation of nuclear mRNA splicing, via spliceosome;   up regulation of nuclear mRNA splicing, via spliceosome;   upregulation of nuclear mRNA splicing, via spliceosome
 narrow_synonym: activation of nuclear mRNA splicing via U2-type spliceosome;   activation of nuclear mRNA splicing, via spliceosome;   positive regulation of nuclear mRNA splicing via U2-type spliceosome;   stimulation of nuclear mRNA splicing via U2-type spliceosome;   stimulation of nuclear mRNA splicing, via spliceosome;   up regulation of nuclear mRNA splicing via U2-type spliceosome;   upregulation of nuclear mRNA splicing via U2-type spliceosome
 broad_synonym: positive regulation of pre-mRNA splicing
 alt_id: GO:0035057

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positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf3 CUGBP Elav-like family member 3 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chrNW_004955589:700,965...715,684
Ensembl chrNW_004955589:701,767...713,179 		JBrowse link
G Celf4 CUGBP Elav-like family member 4 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chrNW_004955402:23,607,160...23,898,495
Ensembl chrNW_004955402:23,617,421...23,898,347 		JBrowse link
G Dazap1 DAZ associated protein 1 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955495:6,499,553...6,516,227
Ensembl chrNW_004955495:6,497,890...6,524,462 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within ISO (PMID:18480465) MGI PMID:18480465 NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873 		JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955477:1,294,479...1,302,433
Ensembl chrNW_004955477:1,294,472...1,302,505 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984 		JBrowse link
G Lmntd2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955476:11,487,918...11,493,281
Ensembl chrNW_004955476:11,489,481...11,493,923 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:23793891) CAFA PMID:23793891 NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor involved_in ISO (PMID:28221134) UniProt PMID:28221134 NCBI chrNW_004955414:19,499,577...19,607,075
Ensembl chrNW_004955414:19,499,406...19,607,075 		JBrowse link
G Obi1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955404:28,759,640...28,803,257
Ensembl chrNW_004955404:28,758,918...28,804,972 		JBrowse link
G Prdx6 peroxiredoxin 6 involved_in ISO (PMID:16186110) UniProt PMID:16186110 NCBI chrNW_004955406:13,717,267...13,728,216
Ensembl chrNW_004955406:13,717,267...13,728,216 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 acts_upstream_of_or_within ISO (PMID:18480465) MGI PMID:18480465 NCBI chrNW_004955511:5,546,212...5,552,368
Ensembl chrNW_004955511:5,545,989...5,557,792 		JBrowse link
G Sf3b4 splicing factor 3b subunit 4 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955413:826,190...830,502
Ensembl chrNW_004955413:826,190...832,496 		JBrowse link
G Slc39a5 solute carrier family 39 member 5 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955458:3,843,492...3,849,794
Ensembl chrNW_004955458:3,843,112...3,849,794 		JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955559:1,618,246...1,634,144
Ensembl chrNW_004955559:1,614,039...1,634,142 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:12840015) UniProt PMID:12840015 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:20123736) UniProt PMID:20123736 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886 		JBrowse link
G Tra2a transformer 2 alpha homolog acts_upstream_of_or_within ISO (PMID:22194695) MGI PMID:22194695 NCBI chrNW_004955410:25,759,649...25,784,128
Ensembl chrNW_004955410:25,759,649...25,784,128 		JBrowse link
G Tra2b transformer 2 beta homolog involved_in
acts_upstream_of_or_within		 ISO (PMID:15009664)
(PMID:22194695)		 UniProt
MGI		 PMID:15009664 PMID:22194695 NCBI chrNW_004955420:21,707,618...21,728,186
Ensembl chrNW_004955420:21,707,618...21,728,186 		JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chrNW_004955451:15,978,571...15,980,352 JBrowse link
G Exosc10 exosome component 10 acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176 		JBrowse link
G Upf3a UPF3A regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chrNW_004955404:25,556...36,730 JBrowse link
G Upf3b UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chrNW_004955534:176,553...193,033
Ensembl chrNW_004955534:176,522...193,319 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12362
    metabolic process 7488
      primary metabolic process 6455
        RNA processing 583
          mRNA processing 280
            mRNA splicing, via spliceosome 219
              positive regulation of mRNA splicing, via spliceosome 24
                positive regulation of mRNA cis splicing, via spliceosome 5
Path 2
Term Annotations click to browse term
  biological_process 12362
    metabolic process 7488
      primary metabolic process 6455
        nucleobase-containing compound metabolic process 3737
          nucleic acid metabolic process 3370
            RNA metabolic process 2899
              RNA biosynthetic process 2744
                RNA processing 583
                  RNA splicing 276
                    RNA splicing, via transesterification reactions 219
                      RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 219
                        mRNA splicing, via spliceosome 219
                          regulation of mRNA splicing, via spliceosome 93
                            positive regulation of mRNA splicing, via spliceosome 24
                              positive regulation of mRNA cis splicing, via spliceosome 5
paths to the root