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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA splicing, via transesterification reactions
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Accession:GO:0000375 term browser browse the term
Definition:Splicing of RNA via a series of two transesterification reactions.
Comment:Note that nuclear mRNA, Group I, Group II, and Group III introns are all spliced by a series of two transesterification reactions that occur within the RNA itself, or between two RNAs in trans splicing. Some of these require one or more proteins to stabilize the catalytic conformation, while others are autocatalytic. Note that tRNA introns are spliced by a different catalytic mechanism.
Synonyms:related_synonym: RNA splicing factor activity, transesterification mechanism;   pre-mRNA splicing factor activity;   spliceosomal catalysis
 alt_id: GO:0000385;   GO:0031202


show annotations for term's descendants           Sort by:
RNA splicing, via transesterification reactions term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbr1 debranching RNA lariats 1 involved_in ISO (PMID:10982890) RGD PMID:10982890 NCBI chr 8:100,139,039...100,150,768
Ensembl chr 8:100,139,034...100,151,030 		JBrowse link
G Scaf11 SR-related CTD-associated factor 11 involved_in ISO (PMID:9447963) RGD PMID:9447963 NCBI chr 7:127,571,678...127,624,089
Ensembl chr 7:127,574,463...127,624,101 		JBrowse link
G Slu7 SLU7 homolog, splicing factor involved_in ISS
ISO		 PMID:15181151
(PMID:10197984)		 RGD PMID:10197984 PMID:15181151 RGD:1304333 NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:9774382)
(MGI:1315084|PMID:9774382)		 RGD PMID:9774382 MGI:1315084 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768 		JBrowse link
G Wdr83 WD repeat domain 83 involved_in ISO (PMID:11991638) RGD PMID:11991638 NCBI chr19:23,076,948...23,082,569
Ensembl chr19:23,077,010...23,082,563 		JBrowse link
alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001435.1 involved_in IEA GO_REF:0000002
GO_REF:0000118		 InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 Ensembl chr 1:43,640,876...43,641,875 JBrowse link
G AABR07056845.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:37,066,520...37,067,514 JBrowse link
G Cdk13 cyclin-dependent kinase 13 involved_in ISO (MGI:3699439|PMID:17261272) RGD PMID:17261272 MGI:3699439 NCBI chr17:47,251,145...47,344,675
Ensembl chr17:47,251,163...47,341,721 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:19720736) RGD PMID:19720736 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786 		JBrowse link
G Ddx17 DEAD-box helicase 17 involved_in ISO
IBA		 (PMID:24275493), (PMID:24910439)
GO_REF:0000033
(MGI:5883203|PMID:24910439)		 RGD
GO_Central		 PMID:24275493 PMID:24910439 GO_REF:0000033 MGI:5883203 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO
IBA		 (PMID:24275493), (PMID:24910439)
GO_REF:0000033
(MGI:5883203|PMID:24910439)		 RGD
GO_Central		 PMID:24275493 PMID:24910439 GO_REF:0000033 MGI:5883203 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:28221134) RGD PMID:28221134 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within ISO MGI:1924661 (PMID:26371508) RGD PMID:26371508 NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062 		JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1917326 (PMID:26371508)		 Ensembl
RGD		 PMID:26371508 GO_REF:0000107 NCBI chr19:34,034,559...34,041,726
Ensembl chr19:34,034,559...34,041,726 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 acts_upstream_of_or_within ISO (PMID:15798186) RGD PMID:15798186 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609 		JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M involved_in ISO (PMID:19874820) RGD PMID:19874820 NCBI chr 7:14,438,703...14,476,781
Ensembl chr 7:14,438,688...14,476,762 		JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 acts_upstream_of_or_within ISO MGI:3052922 (PMID:19075228), (PMID:19720736) RGD PMID:19075228 PMID:19720736 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in ISO
IBA
ISS		 (PMID:23512658)
GO_REF:0000033
(MGI:5477858|PMID:23512658)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23512658 GO_REF:0000024 GO_REF:0000033 MGI:5477858 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087 		JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531 		JBrowse link
G Rbm17 RNA binding motif protein 17 involved_in ISO
IBA		 (PMID:17589525)
GO_REF:0000033		 RGD
GO_Central		 PMID:17589525 GO_REF:0000033 NCBI chr17:66,937,140...66,954,034
Ensembl chr17:66,937,140...66,954,014 		JBrowse link
G Rsrc1 arginine and serine rich coiled-coil 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
(PMID:15798186)
GO_REF:0000033
GO_REF:0000118		 InterPro
RGD
GO_Central
TreeGrafter		 PMID:15798186 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:151,226,821...151,632,771
Ensembl chr 2:151,231,156...151,632,765 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO
IBA		 (PMID:19874820)
GO_REF:0000033		 RGD
GO_Central		 PMID:19874820 GO_REF:0000033 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Sfswap splicing factor SWAP involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:8940107)		 Ensembl
RGD		 PMID:8940107 GO_REF:0000107 NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884 		JBrowse link
G Slu7 SLU7 homolog, splicing factor involved_in ISO
ISS		 (PMID:15728250)
PMID:15181151		 RGD PMID:15728250 PMID:15181151 RGD:1304333 NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349 		JBrowse link
G Smptb polypyrimidine tract-binding protein IDA RGD PMID:12578833 RGD:1299129 NCBI chr  X:16,609,016...16,610,898
Ensembl chr  X:16,606,597...16,610,874 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in IMP
IBA
ISO		 GO_REF:0000033
(PMID:8940107)		 GO_Central
RGD		 PMID:8940107 PMID:23462647 GO_REF:0000033, RGD:11038736 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22767602)		 UniProt
RGD		 PMID:22767602 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860 		JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499 		JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in ISO (PMID:33230114) RGD PMID:33230114 NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828 		JBrowse link
generation of catalytic spliceosome for first transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xab2 XPA binding protein 2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692 		JBrowse link
G Yju2 YJU2 splicing factor involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:789,603...799,505
Ensembl chr 9:789,606...799,496 		JBrowse link
G Yju2l1 YJU2 splicing factor like 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr16:21,108,807...21,109,887
Ensembl chr16:21,108,942...21,109,883 		JBrowse link
generation of catalytic spliceosome for second transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000118
GO_REF:0000033		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188 		JBrowse link
G Prpf18 pre-mRNA processing factor 18 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979 		JBrowse link
mRNA 3'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188 		JBrowse link
G Slu7 SLU7 homolog, splicing factor involved_in ISO
ISS		 (PMID:15728250)
PMID:15181151		 RGD PMID:15728250 PMID:15181151 RGD:1304333 NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349 		JBrowse link
mRNA 5'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000066758 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:14,995,412...14,996,454 JBrowse link
G LOC120099250 U1 small nuclear ribonucleoprotein C-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr  X:135,673,708...135,678,865 JBrowse link
G Prpf39 pre-mRNA processing factor 39 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:83,088,981...83,113,826
Ensembl chr 6:83,088,986...83,113,825 		JBrowse link
G Psip1 PC4 and SRSF1 interacting protein 1 involved_in ISO
IEA
ISS		 (PMID:9885563)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:9885563 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:97,847,010...97,879,280
Ensembl chr 5:97,847,015...97,879,257 		JBrowse link
G Sfswap splicing factor SWAP involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:8940107)
GO_REF:0000118
GO_REF:0000033		 Ensembl
RGD
TreeGrafter
GO_Central		 PMID:8940107 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884 		JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:8940107), (PMID:9885563) RGD PMID:8940107 PMID:9885563 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336 		JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778 		JBrowse link
mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3h9orf78 similar to human chromosome 9 open reading frame 78 involved_in ISO (PMID:35241646) RGD PMID:35241646 NCBI chr 3:14,264,262...14,272,552
Ensembl chr 3:14,264,083...14,272,764 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829 		JBrowse link
G Clns1a chloride nucleotide-sensitive channel 1A involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661 		JBrowse link
G Cwc15 CWC15 spliceosome-associated protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:11,305,401...11,316,326
Ensembl chr 8:11,305,424...11,316,325 		JBrowse link
G Dcps decapping enzyme, scavenger involved_in ISS
ISO		 GO_REF:0000024
(PMID:18426921)		 UniProt
RGD		 PMID:18426921 GO_REF:0000024 NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389 		JBrowse link
G ENSRNOG00000068015 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr  X:133,878,251...133,878,959 JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:18426921)		 UniProt
Ensembl
InterPro
RGD		 PMID:18426921 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885 		JBrowse link
G Prpf40a pre-mRNA processing factor 40 homolog A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886 		JBrowse link
G Prpf40b pre-mRNA processing factor 40 homolog B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:130,392,611...130,454,053
Ensembl chr 7:130,432,112...130,454,052 		JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625 		JBrowse link
G Rbm17 RNA binding motif protein 17 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr17:66,937,140...66,954,034
Ensembl chr17:66,937,140...66,954,014 		JBrowse link
G Rbm22 RNA binding motif protein 22 involved_in ISO
ISS		 (PMID:22246180)
GO_REF:0000024		 RGD
UniProt		 PMID:22246180 GO_REF:0000024 NCBI chr18:54,013,374...54,024,182
Ensembl chr18:54,013,351...54,024,569 		JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136 		JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:34365507)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:34365507 GO_REF:0000024 GO_REF:0000107 NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140 		JBrowse link
G Sf3a1 splicing factor 3A subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144 		JBrowse link
G Wbp4 WW domain binding protein 4 involved_in ISO
IEA
ISS		 (PMID:19592703)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19592703 GO_REF:0000024 GO_REF:0000107 NCBI chr15:54,862,700...54,890,668
Ensembl chr15:54,862,843...54,890,647 		JBrowse link
mRNA splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:11158314)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:11158314 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426 		JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:11158314)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:11158314 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333 		JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:11158314) RGD PMID:11158314 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786 		JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322 		JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041 		JBrowse link
G Khdc4 KH domain containing 4, pre-mRNA splicing factor involved_in ISO (PMID:19641227) RGD PMID:19641227 NCBI chr 2:174,149,059...174,177,816
Ensembl chr 2:174,149,141...174,177,504 		JBrowse link
G Luc7l LUC7-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:15,273,340...15,307,131
Ensembl chr10:15,273,348...15,303,112 		JBrowse link
G Luc7l2 LUC7-like 2 pre-mRNA splicing factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:67,287,593...67,347,986
Ensembl chr 4:67,287,640...67,347,964 		JBrowse link
G Luc7l3 LUC7-like 3 pre-mRNA splicing factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,240,050...79,276,555
Ensembl chr10:79,240,563...79,276,538 		JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 acts_upstream_of_or_within ISO MGI:3052922 (PMID:14671308), (PMID:16717059) RGD PMID:14671308 PMID:16717059 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368 		JBrowse link
G Nol3 nucleolar protein 3 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:10196175)		 UniProt
Ensembl
RGD		 PMID:10196175 GO_REF:0000024 GO_REF:0000107 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250 		JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4124189 (PMID:10829067), (PMID:22802532)		 Ensembl
RGD		 PMID:10829067 PMID:22802532 GO_REF:0000107 NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506 		JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531 		JBrowse link
G Rbmx RNA binding motif protein, X-linked IMP RGD PMID:19282290 RGD:2316827 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743 		JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859 		JBrowse link
G Setx senataxin involved_in ISO (PMID:19515850) RGD PMID:19515850 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:9774382) RGD PMID:9774382 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12549914)		 UniProt
RGD		 PMID:12549914 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20167602)		 UniProt
RGD		 PMID:20167602 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028 		JBrowse link
mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07026797.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr17:733,746...735,096 JBrowse link
G AABR07037800.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:29,333,112...29,334,044 JBrowse link
G AABR07042226.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G AABR07048397.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:246,755,907...246,757,455 JBrowse link
G AC109707.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr14:43,128,814...43,130,403 JBrowse link
G AC126899.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr19:40,146,975...40,147,500 JBrowse link
G Aqr aquarius intron-binding spliceosomal factor involved_in ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 3:100,874,987...100,945,026
Ensembl chr 3:100,874,987...100,945,044 		JBrowse link
G Bcas2 BCAS2, pre-mRNA processing factor involved_in ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 2:190,692,503...190,700,386
Ensembl chr 2:190,692,461...190,700,389 		JBrowse link
G Bud13 BUD13 homolog involved_in ISO
IEA
IBA
ISS		 (PMID:29360106)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
TreeGrafter
GO_Central
Ensembl
UniProt		 PMID:29360106 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:46,575,124...46,590,964
Ensembl chr 8:46,575,115...46,590,958 		JBrowse link
G Bud31 BUD31 homolog involved_in ISO
IBA
IEA		 (PMID:28076346)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:28076346 GO_REF:0000033 GO_REF:0000118 NCBI chr12:9,462,838...9,470,387
Ensembl chr12:9,462,441...9,470,509 		JBrowse link
G C3h9orf78 similar to human chromosome 9 open reading frame 78 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:14,264,262...14,272,552
Ensembl chr 3:14,264,083...14,272,764 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:28062851) RGD PMID:28062851 NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829 		JBrowse link
G Casc3 CASC3 exon junction complex subunit involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29301961)		 UniProt
Ensembl
RGD		 PMID:29301961 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,769,014...83,788,966
Ensembl chr10:83,769,001...83,788,966 		JBrowse link
G Cdc40 cell division cycle 40 involved_in ISO
IBA		 (PMID:28076346), (PMID:33220177)
GO_REF:0000033		 RGD
GO_Central		 PMID:28076346 PMID:33220177 GO_REF:0000033 NCBI chr20:44,273,080...44,325,605
Ensembl chr20:44,273,089...44,325,358 		JBrowse link
G Cdc5l cell division cycle 5-like involved_in ISO
IBA
IEA
ISS		 (PMID:28076346)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl
InterPro
UniProt		 PMID:28076346 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:15,564,949...15,603,453
Ensembl chr 9:15,564,767...15,603,450 		JBrowse link
G Cenatac centrosomal AT-AC splicing factor involved_in ISO (PMID:34009673) RGD PMID:34009673 NCBI chr 8:44,735,968...44,742,859
Ensembl chr 8:44,735,972...44,742,837 		JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 involved_in ISO
IBA
ISS		 (PMID:28076346)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:28076346 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302
Ensembl chr 6:133,337,039...133,354,302 		JBrowse link
G Cwc15 CWC15 spliceosome-associated protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:28076346)		 UniProt
RGD		 PMID:28076346 GO_REF:0000024 NCBI chr 8:11,305,401...11,316,326
Ensembl chr 8:11,305,424...11,316,325 		JBrowse link
G Cwc22 CWC22 spliceosome associated protein involved_in ISO
IBA		 (PMID:29360106)
GO_REF:0000033		 RGD
GO_Central		 PMID:29360106 GO_REF:0000033 NCBI chr 3:62,815,230...62,864,269
Ensembl chr 3:62,802,045...62,864,228 		JBrowse link
G Cwc25 CWC25 spliceosome-associated protein homolog involved_in ISO
IBA		 (PMID:29301961)
GO_REF:0000033		 RGD
GO_Central		 PMID:29301961 GO_REF:0000033 NCBI chr10:82,735,698...82,760,373
Ensembl chr10:82,736,995...82,760,354 		JBrowse link
G Cwf19l1 CWF19 like cell cycle control factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:242,997,720...243,020,989
Ensembl chr 1:242,997,726...243,020,961 		JBrowse link
G Cwf19l2 CWF19 like cell cycle control factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:290,148...356,636
Ensembl chr 6:281,685...356,604 		JBrowse link
G Dbr1 debranching RNA lariats 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:10982890)		 GO_Central
RGD		 PMID:10982890 GO_REF:0000033 NCBI chr 8:100,139,039...100,150,768
Ensembl chr 8:100,139,034...100,151,030 		JBrowse link
G Ddx23 DEAD-box helicase 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:129,797,620...129,814,909
Ensembl chr 7:129,797,614...129,814,949 		JBrowse link
G Ddx39a DExD-box helicase 39A involved_in ISO
IEA
IBA		 UniProtKB:Q07478 (PMID:15047853)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:15047853 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:24,418,743...24,427,422
Ensembl chr19:24,418,114...24,426,954 		JBrowse link
G Ddx39b DExD-box helicase 39B involved_in ISO
IBA
IEA		 UniProtKB:Q07478 (PMID:15047853)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:15047853 GO_REF:0000033 GO_REF:0000118 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G Ddx41 DEAD-box helicase 41 involved_in ISO
IBA		 (PMID:25920683)
GO_REF:0000033		 RGD
GO_Central		 PMID:25920683 GO_REF:0000033 NCBI chr17:9,102,926...9,108,415
Ensembl chr17:9,103,010...9,108,415 		JBrowse link
G Ddx41l1 DEAD-box helicase 41 like 1 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033
GO_REF:0000118		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:107,185,923...107,187,961
Ensembl chr 6:107,186,096...107,187,961 		JBrowse link
G Ddx46 DEAD-box helicase 46 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:32494006), (PMID:34822310), (PMID:36797247)		 UniProt
GO_Central
RGD		 PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000024 GO_REF:0000033 NCBI chr17:8,942,070...8,988,440
Ensembl chr17:8,944,454...8,988,439 		JBrowse link
G Dhx16 DEAH-box helicase 16 involved_in ISO (PMID:20423332), (PMID:25296192), (PMID:29360106) RGD PMID:20423332 PMID:25296192 PMID:29360106 NCBI chr20:2,862,000...2,874,991
Ensembl chr20:2,862,000...2,874,948 		JBrowse link
G Dhx38 DEAH-box helicase 38 involved_in ISO
IBA		 (PMID:9524131)
GO_REF:0000033		 RGD
GO_Central		 PMID:9524131 GO_REF:0000033 NCBI chr19:37,512,893...37,530,135
Ensembl chr19:37,512,891...37,530,140 		JBrowse link
G Dhx8 DEAH-box helicase 8 involved_in ISO (PMID:28076346) RGD PMID:28076346 NCBI chr10:86,667,641...86,704,198
Ensembl chr10:86,667,834...86,705,137 		JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 involved_in ISO
IBA		 (PMID:28076346)
GO_REF:0000033		 RGD
GO_Central		 PMID:28076346 GO_REF:0000033 NCBI chr10:87,804,893...87,852,181
Ensembl chr10:87,804,892...87,846,079 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:29301961)		 UniProt
GO_Central
RGD		 PMID:29301961 GO_REF:0000024 GO_REF:0000033 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057 		JBrowse link
G ENSRNOG00000063783 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 2:167,764,388...167,766,354 JBrowse link
G ENSRNOG00000063892 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 1:26,757,597...26,758,813 JBrowse link
G ENSRNOG00000064122 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 4:144,511,368...144,511,634 JBrowse link
G ENSRNOG00000065450 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr18:73,476,936...73,477,748 JBrowse link
G ENSRNOG00000068896 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 7:58,714,468...58,715,548 JBrowse link
G ENSRNOG00000069332 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 2:89,339,501...89,339,701 JBrowse link
G ENSRNOG00000069815 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 4:30,933,948...30,935,941 JBrowse link
G Ess2 ess-2 splicing factor homolog involved_in ISO (PMID:34694367) RGD PMID:34694367 NCBI chr11:83,075,893...83,085,849
Ensembl chr11:83,075,925...83,084,846 		JBrowse link
G Fra10ac1 FRA10A associated CGG repeat 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:34694367)		 UniProt
Ensembl
RGD		 PMID:34694367 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:235,969,071...236,001,074
Ensembl chr 1:235,969,112...236,001,210 		JBrowse link
G Gcfc2 GC-rich sequence DNA-binding factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:114,481,613...114,519,268
Ensembl chr 4:114,481,607...114,519,962 		JBrowse link
G Gpkow G patch domain and KOW motifs involved_in ISO
IBA		 (PMID:25296192)
GO_REF:0000033		 RGD
GO_Central		 PMID:25296192 GO_REF:0000033 NCBI chr  X:14,791,601...14,806,384
Ensembl chr  X:14,791,610...14,806,384 		JBrowse link
G Hars2 histidyl-tRNA synthetase 2, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,398,790...28,408,075
Ensembl chr18:28,398,795...28,414,747 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:6,507,728...6,510,385
Ensembl chr17:6,507,275...6,509,375 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609 		JBrowse link
G Hnrnpa1-ps20 heterogeneous nuclear ribonucleoprotein A1, pseudogene 20 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:34,673,369...34,674,656
Ensembl chr 3:34,673,373...34,674,332 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(PMID:26321680)		 UniProt
GO_Central
TreeGrafter
Ensembl
RGD		 PMID:26321680 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249 		JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:60,578,574...60,588,755
Ensembl chr 3:60,578,673...60,588,306 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO
ISS		 (PMID:25719671)
GO_REF:0000024		 RGD
UniProt		 PMID:25719671 GO_REF:0000024 NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183 		JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 involved_in ISO (PMID:32494006), (PMID:34822310), (PMID:36797247) RGD PMID:32494006 PMID:34822310 PMID:36797247 NCBI chr  X:134,935,426...134,949,607
Ensembl chr  X:134,935,426...134,949,607 		JBrowse link
G Ik IK cytokine involved_in ISO
IBA
IEA
ISS		 (PMID:28781166)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:28781166 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr18:28,358,004...28,372,809
Ensembl chr18:28,357,977...28,378,832 		JBrowse link
G Isy1 ISY1 splicing factor homolog involved_in ISO
ISS		 (PMID:29301961)
GO_REF:0000024		 RGD
UniProt		 PMID:29301961 GO_REF:0000024 NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188 		JBrowse link
G LOC100911361 heterogeneous nuclear ribonucleoprotein A3-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:78,217,733...78,219,237
Ensembl chr10:78,217,761...78,218,895 		JBrowse link
G LOC100912568 probable ATP-dependent RNA helicase DDX41-like involved_in IEA GO_REF:0000002
GO_REF:0000118		 InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:107,230,038...107,231,786
Ensembl chr 6:107,226,563...107,244,212 		JBrowse link
G LOC108350566 heterogeneous nuclear ribonucleoproteins A2/B1 pseudogene involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:118,679,416...118,680,923
Ensembl chr 3:118,679,472...118,680,908
Ensembl chr 3:118,679,472...118,680,908 		JBrowse link
G LOC120096281 heterogeneous nuclear ribonucleoprotein A3-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:65,940,732...65,942,250
Ensembl chr13:65,941,100...65,942,227 		JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO
IBA		 (PMID:28781166)
GO_REF:0000033		 RGD
GO_Central		 PMID:28781166 GO_REF:0000033 NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266 		JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:28781166)
GO_REF:0000033
(PMID:10369684), (PMID:10523320)		 RGD
GO_Central		 PMID:10369684 PMID:10523320 PMID:28781166 GO_REF:0000033 NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269 		JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO (PMID:28781166) RGD PMID:28781166 NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926 		JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO
IBA		 (PMID:28781166)
GO_REF:0000033		 RGD
GO_Central		 PMID:28781166 GO_REF:0000033 NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165
Ensembl chr 4:104,652,477...104,654,165 		JBrowse link
G Lsm5l1 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:1,339,769...1,340,198
Ensembl chr16:1,339,784...1,340,056 		JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO
IBA		 (PMID:28781166)
GO_REF:0000033		 RGD
GO_Central		 PMID:28781166 GO_REF:0000033 NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484
Ensembl chr19:42,114,032...42,116,484 		JBrowse link
G Lsm6l1 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484 		JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119 		JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated involved_in ISO
IBA		 (PMID:28781166)
GO_REF:0000033		 RGD
GO_Central		 PMID:28781166 GO_REF:0000033 NCBI chr 4:47,306,259...47,312,125
Ensembl chr 4:47,306,295...47,314,293 		JBrowse link
G Magohb mago homolog B, exon junction complex subunit involved_in ISO (PMID:28502770) RGD PMID:28502770 NCBI chr 4:165,034,131...165,041,977
Ensembl chr 4:165,034,122...165,041,967 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:25719671) RGD PMID:25719671 NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in
NOT|involved_in		 ISO (PMID:25719671), (PMID:26321680)
(MGI:5621227|PMID:25569111)
(MGI:6095345|PMID:28637692)		 RGD PMID:25569111 PMID:25719671 PMID:26321680 PMID:28637692 MGI:5621227 MGI:6095345 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Mfap1a microfibrillar-associated protein 1A involved_in ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 3:108,440,163...108,456,744
Ensembl chr 3:108,438,845...108,456,750 		JBrowse link
G Mfap1al1 microfibrillar-associated protein 1A like 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:53,338,138...53,343,973
Ensembl chr10:53,338,210...53,343,981 		JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885 		JBrowse link
G Nhp2 NHP2 ribonucleoprotein involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:35,877,057...35,880,399
Ensembl chr10:35,877,054...35,882,545 		JBrowse link
G Nova1 NOVA alternative splicing regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:2386947 (PMID:10719891)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:10719891 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:63,780,105...63,905,567
Ensembl chr 6:63,783,489...63,906,289 		JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021 		JBrowse link
G Paxbp1 PAX3 and PAX7 binding protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:30,272,037...30,301,504
Ensembl chr11:30,272,037...30,301,648 		JBrowse link
G Phf5a PHD finger protein 5A involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:12234937), (PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000002		 UniProt
GO_Central
TreeGrafter
RGD
InterPro		 PMID:12234937 PMID:27720643 PMID:29360106 PMID:32494006 PMID:34822310 More... GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:113,378,469...113,385,035
Ensembl chr 7:113,378,471...113,385,460 		JBrowse link
G Plrg1 pleiotropic regulator 1 involved_in ISO
IBA
IEA
ISS		 (PMID:28076346)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl
InterPro
UniProt		 PMID:28076346 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:168,408,139...168,424,470
Ensembl chr 2:168,408,124...168,424,522 		JBrowse link
G Ppie peptidylprolyl isomerase E involved_in ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 5:135,406,172...135,419,332
Ensembl chr 5:135,406,176...135,419,235 		JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 involved_in ISO (PMID:28076346), (PMID:33220177) RGD PMID:28076346 PMID:33220177 NCBI chr20:7,302,292...7,322,349
Ensembl chr20:7,302,621...7,322,354 		JBrowse link
G Ppp1r8 protein phosphatase 1, regulatory subunit 8 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:145,031,632...145,048,753
Ensembl chr 5:145,031,498...145,048,752 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO
IBA
IEA
ISS		 (PMID:20176811)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000002
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
InterPro
UniProt		 PMID:20176811 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Prpf3 pre-mRNA processing factor 3 involved_in ISO
IBA		 (PMID:28781166)
GO_REF:0000033		 RGD
GO_Central		 PMID:28781166 GO_REF:0000033 NCBI chr 2:183,379,041...183,403,526
Ensembl chr 2:183,378,718...183,403,489 		JBrowse link
G Prpf31 pre-mRNA processing factor 31 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:28781166)
GO_REF:0000033
(PMID:11867543)		 RGD
GO_Central		 PMID:11867543 PMID:28781166 GO_REF:0000033 NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873 		JBrowse link
G Prpf38a pre-mRNA processing factor 38A involved_in ISO (PMID:26673105), (PMID:28781166) RGD PMID:26673105 PMID:28781166 NCBI chr 5:123,312,461...123,324,160
Ensembl chr 5:123,311,482...123,323,972 		JBrowse link
G Prpf38b pre-mRNA processing factor 38B involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:196,553,224...196,562,271
Ensembl chr 2:196,553,225...196,562,250 		JBrowse link
G Prpf4 pre-mRNA splicing tri-snRNP complex factor 4 involved_in ISO
IBA		 (PMID:28781166)
GO_REF:0000033		 RGD
GO_Central		 PMID:28781166 GO_REF:0000033 NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919 		JBrowse link
G Prpf40a pre-mRNA processing factor 40 homolog A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886 		JBrowse link
G Prpf40b pre-mRNA processing factor 40 homolog B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:130,392,611...130,454,053
Ensembl chr 7:130,432,112...130,454,052 		JBrowse link
G Prpf6 pre-mRNA processing factor 6 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:21549338), (PMID:28781166)		 UniProt
GO_Central
RGD		 PMID:21549338 PMID:28781166 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 involved_in ISO (PMID:28781166), (PMID:29301961) RGD PMID:28781166 PMID:29301961 NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606 		JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in IBA
ISO		 GO_REF:0000033
(PMID:31794640)		 GO_Central
RGD		 PMID:31794640 GO_REF:0000033 NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665 		JBrowse link
G Rbm19 RNA binding motif protein 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:36,365,775...36,451,033
Ensembl chr12:36,365,772...36,450,993 		JBrowse link
G Rbm41 RNA binding motif protein 41 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:103,605,732...103,660,381
Ensembl chr  X:103,608,585...103,660,381 		JBrowse link
G Rbm44 RNA binding motif protein 44 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:91,731,153...91,756,783
Ensembl chr 9:91,731,115...91,756,772 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020 		JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430 		JBrowse link
G Rbm6 RNA binding motif protein 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:108,452,687...108,552,783
Ensembl chr 8:108,452,687...108,552,771 		JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISS
ISO		 GO_REF:0000024
(PMID:29301961)		 UniProt
RGD		 PMID:29301961 GO_REF:0000024 NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959 		JBrowse link
G Rbmx2 RNA binding motif protein, X-linked 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000002
(PMID:29360106)		 UniProt
GO_Central
TreeGrafter
InterPro
RGD		 PMID:29360106 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:127,888,514...127,896,239
Ensembl chr  X:127,888,438...127,896,869 		JBrowse link
G Rnf113a1 ring finger protein 113A1 involved_in ISO (PMID:29360106) RGD PMID:29360106 NCBI chr  X:116,427,941...116,429,164
Ensembl chr  X:116,427,684...116,433,762 		JBrowse link
G Rnpc3 RNA-binding region (RNP1, RRM) containing 3 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:201,432,769...201,457,015
Ensembl chr 2:201,432,684...201,456,747 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858 		JBrowse link
G Rnps1-ps5 RNA binding protein with serine rich domain 1, pseudogene 5 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:24,630,410...24,632,144
Ensembl chr 5:24,630,135...24,631,316 		JBrowse link
G Rsrc1 arginine and serine rich coiled-coil 1 involved_in ISO
ISS		 (PMID:15798186)
GO_REF:0000024		 RGD
UniProt		 PMID:15798186 GO_REF:0000024 NCBI chr 2:151,226,821...151,632,771
Ensembl chr 2:151,231,156...151,632,765 		JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136 		JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO
IBA		 (PMID:15314151)
GO_REF:0000033		 RGD
GO_Central		 PMID:15314151 GO_REF:0000033 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
G Sf1 splicing factor 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330 		JBrowse link
G Sf3a1 splicing factor 3A subunit 1 involved_in ISO (PMID:10882114), (PMID:29360106), (PMID:32494006), (PMID:36797247) RGD PMID:10882114 PMID:29360106 PMID:32494006 PMID:36797247 NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144 		JBrowse link
G Sf3a2 splicing factor 3A subunit 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)		 UniProt
RGD		 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000024 NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530 		JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 involved_in ISO
IBA		 (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000033		 RGD
GO_Central		 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000033 NCBI chr 5:136,967,713...136,987,345
Ensembl chr 5:136,967,691...136,987,361 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:11252167)
(PMID:23211737)
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)		 RGD PMID:11252167 PMID:23211737 PMID:27720643 PMID:28781166 PMID:29360106 More... NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300 		JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 involved_in ISO
IBA		 (PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000033		 RGD
GO_Central		 PMID:27720643 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000033 NCBI chr 1:202,570,423...202,590,774
Ensembl chr 1:202,570,423...202,590,759 		JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 involved_in ISO
IBA		 (PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000033		 RGD
GO_Central		 PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 More... GO_REF:0000033 NCBI chr19:38,782,749...38,820,271
Ensembl chr19:38,783,040...38,820,245 		JBrowse link
G Sf3b4 splicing factor 3B subunit 4 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:36797247)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:27720643 PMID:29360106 PMID:32494006 PMID:36797247 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:183,732,791...183,737,545
Ensembl chr 2:183,732,754...183,737,959 		JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 involved_in ISO
IBA		 (PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000033		 RGD
GO_Central		 PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 More... GO_REF:0000033 NCBI chr 1:7,357,040...7,357,752
Ensembl chr 1:7,350,731...7,357,839 		JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:27720643), (PMID:32494006), (PMID:34822310)
(PMID:23211737)
GO_REF:0000033		 RGD
GO_Central		 PMID:23211737 PMID:27720643 PMID:32494006 PMID:34822310 GO_REF:0000033 NCBI chr 6:27,826,044...27,835,086
Ensembl chr 6:27,826,029...27,835,156 		JBrowse link
G Slc4a1ap solute carrier family 4 member 1 adaptor protein involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 6:24,905,941...24,933,651
Ensembl chr 6:24,905,941...24,933,815 		JBrowse link
G Slu7 SLU7 homolog, splicing factor involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349 		JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
GO_REF:0000107
(PMID:28781166)		 UniProt
InterPro
Ensembl
RGD		 PMID:28781166 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:55,856,691...55,875,262
Ensembl chr 5:55,856,246...55,875,300 		JBrowse link
G Snip1 Smad nuclear interacting protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29360106)		 UniProt
RGD		 PMID:29360106 GO_REF:0000024 NCBI chr 5:137,328,371...137,335,846
Ensembl chr 5:137,328,371...137,335,845 		JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29301961), (PMID:8670905)		 UniProt
RGD		 PMID:8670905 PMID:29301961 GO_REF:0000024 NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182 		JBrowse link
G Snrnp25 small nuclear ribonucleoprotein U11/U12 subunit 25 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,420,482...15,423,806
Ensembl chr10:15,420,486...15,423,804 		JBrowse link
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:32,112,032...32,119,829
Ensembl chr12:32,110,993...32,122,660 		JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 involved_in ISO
IBA
ISS		 (PMID:9531537)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:9531537 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:95,856,038...95,876,434
Ensembl chr 1:95,856,036...95,876,392 		JBrowse link
G Snrpa small nuclear ribonucleoprotein polypeptide A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:82,481,770...82,490,540
Ensembl chr 1:82,481,770...82,490,538 		JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' involved_in ISO
IBA		 (PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
GO_REF:0000033		 RGD
GO_Central		 PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247 GO_REF:0000033 NCBI chr 1:119,641,402...119,654,653
Ensembl chr 1:119,638,481...119,654,653 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)		 UniProt
TreeGrafter
GO_Central
RGD		 PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339 		JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 involved_in ISO
IBA		 (PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
GO_REF:0000033		 RGD
GO_Central		 PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247 GO_REF:0000033 NCBI chr 3:130,399,239...130,408,821
Ensembl chr 3:130,399,248...130,408,812 		JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C involved_in ISO (PMID:8972845) RGD PMID:8972845 NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide involved_in ISO (PMID:28076346), (PMID:32494006), (PMID:36797247) RGD PMID:28076346 PMID:32494006 PMID:36797247 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide involved_in ISO (PMID:28076346), (PMID:32494006), (PMID:36797247) RGD PMID:28076346 PMID:32494006 PMID:36797247 NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide involved_in ISO (PMID:28076346), (PMID:32494006), (PMID:36797247) RGD PMID:28076346 PMID:32494006 PMID:36797247 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E involved_in ISO (PMID:28076346), (PMID:32494006), (PMID:36797247) RGD PMID:28076346 PMID:32494006 PMID:36797247 NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F involved_in ISO
IBA		 (PMID:28076346), (PMID:32494006), (PMID:36797247)
GO_REF:0000033		 RGD
GO_Central		 PMID:28076346 PMID:32494006 PMID:36797247 GO_REF:0000033 NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G involved_in ISO
IBA		 (PMID:28076346), (PMID:32494006), (PMID:36797247)
GO_REF:0000033		 RGD
GO_Central		 PMID:28076346 PMID:32494006 PMID:36797247 GO_REF:0000033 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 		JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118 		JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634 		JBrowse link
G Snrpn-ps4 small nuclear ribonucleoprotein polypeptide N, pseudogene 4 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:93,649,679...93,650,898
Ensembl chr 5:93,650,062...93,650,771 		JBrowse link
G Snrpnl1 small nuclear ribonucleoprotein polypeptide N like 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:56,372,096...56,373,049
Ensembl chr17:56,372,109...56,373,411 		JBrowse link
G Snrpnl2 small nuclear ribonucleoprotein polypeptide N like 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr15:73,193,647...73,194,285
Ensembl chr15:73,193,647...73,195,245 		JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 involved_in ISO
IBA
ISS		 (PMID:28781166)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:28781166 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872 		JBrowse link
G Snu13l1 small nuclear ribonucleoprotein 13 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:150,624,087...150,624,525
Ensembl chr  X:150,624,087...150,624,473 		JBrowse link
G Snurf-ps2 SNRPN upstream open reading frame, pseudogene 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:56,372,096...56,373,411
Ensembl chr 5:93,649,665...93,649,877
Ensembl chr17:93,649,665...93,649,877 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:15194481), (PMID:28076346) RGD PMID:15194481 PMID:28076346 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536 		JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 involved_in ISO (PMID:28076346) RGD PMID:28076346 NCBI chr10:12,815,471...12,848,750
Ensembl chr10:12,815,471...12,848,751 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO
IBA		 (PMID:9774382)
GO_REF:0000033		 RGD
GO_Central		 PMID:9774382 GO_REF:0000033 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768 		JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778 		JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:102,052,158...102,055,365
Ensembl chr10:102,052,314...102,055,338 		JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:7,091,928...7,101,860
Ensembl chr20:7,091,910...7,101,078 		JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:100,605,165...100,610,192
Ensembl chr 6:100,605,456...100,610,177 		JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:14,811,775...14,818,968
Ensembl chr 6:14,811,808...14,818,965 		JBrowse link
G Srsf8 serine and arginine rich splicing factor 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:45,695,314...45,741,153
Ensembl chr  X:45,695,313...45,741,134 		JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499 		JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor involved_in ISO
ISS		 (PMID:28076346)
GO_REF:0000024		 RGD
UniProt		 PMID:28076346 GO_REF:0000024 NCBI chr 5:147,156,492...147,164,416
Ensembl chr 5:147,156,480...147,164,414 		JBrowse link
G Tra2a transformer 2 alpha involved_in ISO (PMID:9546399) RGD PMID:9546399 NCBI chr 4:78,220,838...78,239,737
Ensembl chr 4:78,220,883...78,239,712 		JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of		 ISO
IEA
ISS		 (PMID:9546399)
MGI:2176173|MGI:4450919 (PMID:22194695)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:9546399 PMID:22194695 GO_REF:0000024 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249 		JBrowse link
G Txnl4a thioredoxin-like 4A involved_in ISO (PMID:28781166) RGD PMID:28781166 NCBI chr18:73,659,107...73,674,893
Ensembl chr18:73,659,107...73,674,893 		JBrowse link
G Txnl4b thioredoxin-like 4B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:37,530,157...37,539,827
Ensembl chr19:37,530,152...37,538,521 		JBrowse link
G U2af1 U2 small nuclear RNA auxiliary factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:9,742,904...9,753,840
Ensembl chr20:9,742,905...9,753,832 		JBrowse link
G U2af1l4 U2 small nuclear RNA auxiliary factor 1-like 4 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033
GO_REF:0000118		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:85,816,268...85,818,462
Ensembl chr 1:85,815,101...85,818,462 		JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:1824937) RGD PMID:1824937 NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492 		JBrowse link
G Ubl5 ubiquitin-like 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,181,504...19,185,224
Ensembl chr 8:19,181,615...19,185,217 		JBrowse link
G Usp39 ubiquitin specific peptidase 39 involved_in ISO (PMID:11350945) RGD PMID:11350945 NCBI chr 4:104,373,948...104,406,359
Ensembl chr 4:104,373,955...104,406,359 		JBrowse link
G Usp49 ubiquitin specific peptidase 49 involved_in ISO (PMID:23824326) RGD PMID:23824326 NCBI chr 9:13,305,640...13,366,132
Ensembl chr 9:13,308,178...13,366,132 		JBrowse link
G Wbp4 WW domain binding protein 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
(PMID:28781166)		 UniProt
InterPro
RGD		 PMID:28781166 GO_REF:0000002 GO_REF:0000024 NCBI chr15:54,862,700...54,890,668
Ensembl chr15:54,862,843...54,890,647 		JBrowse link
G Wdr55 WD repeat domain 55 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr18:28,375,366...28,378,834 JBrowse link
G Wdr83 WD repeat domain 83 involved_in ISO
IBA
IEA		 (PMID:11991638)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:11991638 GO_REF:0000033 GO_REF:0000107 NCBI chr19:23,076,948...23,082,569
Ensembl chr19:23,077,010...23,082,563 		JBrowse link
G Xab2 XPA binding protein 2 involved_in ISO
IBA
ISS		 (PMID:28076346)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:28076346 GO_REF:0000024 GO_REF:0000033 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692 		JBrowse link
G Yju2b YJU2 splicing factor homolog B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:23,894,587...23,906,084
Ensembl chr19:23,894,649...23,906,077 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter
RGD		 PMID:10564280 GO_REF:0000033 GO_REF:0000118, RGD:634512 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028 		JBrowse link
G Zcrb1 zinc finger CCHC-type and RNA binding motif containing 1 involved_in IEA GO_REF:0000002
GO_REF:0000118		 InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 7:124,525,227...124,538,564
Ensembl chr 7:124,524,870...124,571,261 		JBrowse link
G Zmat2 zinc finger, matrin type 2 involved_in ISO
IBA		 (PMID:28781166)
GO_REF:0000033		 RGD
GO_Central		 PMID:28781166 GO_REF:0000033 NCBI chr18:28,409,606...28,414,241
Ensembl chr18:28,398,795...28,414,747 		JBrowse link
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 involved_in ISO
IBA
IGI		 (PMID:9237760)
GO_REF:0000033		 RGD
GO_Central		 PMID:9237760 PMID:33691379 GO_REF:0000033, RGD:151232289 NCBI chr  X:30,547,424...30,571,613
Ensembl chr  X:30,547,536...30,570,125 		JBrowse link
G Zrsr2-ps1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2, pseudogene 1 involved_in ISO
IBA		 (MGI:6192413|PMID:29617656)
GO_REF:0000033		 RGD
GO_Central		 PMID:29617656 GO_REF:0000033 MGI:6192413 NCBI chr14:96,972,651...96,978,364
Ensembl chr14:96,972,580...96,978,891 		JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:28,102,112...28,147,001
Ensembl chr15:28,102,112...28,147,001 		JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326 		JBrowse link
G C1qbp complement C1q binding protein involved_in ISO
ISS
IEA
IBA		 (PMID:10022843)
GO_REF:0000024
GO_REF:0000107
GO_REF:0000033		 RGD
UniProt
Ensembl
GO_Central		 PMID:10022843 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21470964)		 Ensembl
RGD		 PMID:21470964 GO_REF:0000107 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420 		JBrowse link
G ENSRNOG00000066561 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 9:2,780,475...2,782,261 JBrowse link
G ENSRNOG00000070131 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 9:3,021,140...3,022,924 JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18480465)		 Ensembl
RGD		 PMID:18480465 GO_REF:0000107 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23636947)		 Ensembl
RGD		 PMID:23636947 GO_REF:0000107 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:22570490 RGD:9999428 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553 		JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220 		JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO (PMID:16376875) RGD PMID:16376875 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 		JBrowse link
G Pcbp4 poly(rC) binding protein 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23636947)		 GO_Central
RGD		 PMID:23636947 GO_REF:0000033 NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:15009664)
(PMID:23636947)
(MGI:6271441|PMID:17679093)
GO_REF:0000024		 RGD
UniProt		 PMID:15009664 PMID:17679093 PMID:23636947 GO_REF:0000024 MGI:6271441 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397 		JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 5:74,313,367...74,399,439
Ensembl chr 5:74,315,101...74,399,791 		JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23636947)		 Ensembl
RGD		 PMID:23636947 GO_REF:0000107 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
ISO
IDA		 PMID:35394688
(PMID:24960161), (PMID:34732726)
(MGI:5817050|PMID:27630136), (MGI:6162809|PMID:29895960), (MGI:6472247|PMID:33110103)
PMID:25573899
PMID:23307558		 RGD PMID:24960161 PMID:27630136 PMID:29895960 PMID:33110103 PMID:34732726 More... MGI:5817050 MGI:6162809 MGI:6472247, RGD:152025505, RGD:152025519, RGD:152025504, RGD:152025509 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060 		JBrowse link
G Rbm42 RNA binding motif protein 42 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:85,898,618...85,908,569
Ensembl chr 1:85,898,625...85,908,573 		JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS		 (PMID:12665594)
GO_REF:0000024		 RGD
UniProt		 PMID:12665594 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858 		JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038
Ensembl chr10:31,943,230...31,950,038 		JBrowse link
G Sfswap splicing factor SWAP involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:11684676)
(MGI:3688015|PMID:11684676)		 RGD PMID:11684676 MGI:3688015 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768 		JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 5:144,060,981...144,090,798
Ensembl chr 5:144,061,463...144,089,229 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860 		JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 6:14,811,775...14,818,968
Ensembl chr 6:14,811,808...14,818,965 		JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 involved_in ISO
ISS		 (PMID:15009664)
GO_REF:0000024		 RGD
UniProt		 PMID:15009664 GO_REF:0000024 NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499 		JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492 		JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr10:85,246,751...85,248,842
Ensembl chr10:85,246,764...85,427,327 		JBrowse link
G Exosc10 exosome component 10 acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345 		JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr  X:116,335,308...116,353,332
Ensembl chr  X:116,335,308...116,353,236 		JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818 		JBrowse link
G Dazap1 DAZ associated protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23636947)		 GO_Central
RGD		 PMID:23636947 GO_REF:0000033 NCBI chr 7:9,423,673...9,448,116
Ensembl chr 7:9,424,178...9,538,818 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within ISO (PMID:18480465) RGD PMID:18480465 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057 		JBrowse link
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533 		JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23636947)		 Ensembl
RGD		 PMID:23636947 GO_REF:0000107 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259 		JBrowse link
G Lmntd2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:196,315,112...196,320,880
Ensembl chr 1:196,315,115...196,319,156 		JBrowse link
G LOC108352643 SRA stem-loop-interacting RNA-binding protein, mitochondrial pseudogene involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr13:53,919,275...53,919,609
Ensembl chr13:53,919,301...53,919,609
Ensembl chr13:53,919,301...53,919,609 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089 		JBrowse link
G Ncl nucleolin involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor involved_in ISO
ISS		 (PMID:28221134)
GO_REF:0000024		 RGD
UniProt		 PMID:28221134 GO_REF:0000024 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Obi1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr15:81,269,413...81,308,734
Ensembl chr15:81,269,416...81,308,734 		JBrowse link
G Prdx6 peroxiredoxin 6 involved_in ISO UniProtKB:Q8IWL8 (PMID:16186110) RGD PMID:16186110 NCBI chr13:73,528,746...73,539,295
Ensembl chr13:73,528,210...73,539,355 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18480465)		 Ensembl
RGD		 PMID:18480465 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Rbm3 RNA binding motif protein 3 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:14,348,909...14,352,387
Ensembl chr  X:14,348,910...14,353,580 		JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743 		JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA
IBA
IEA		 PMID:19282290
GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 PMID:19282290 GO_REF:0000033 GO_REF:0000118, RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859 		JBrowse link
G Rbmxl1b Rbmx like 1B involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:43,956,275...43,957,957
Ensembl chr 4:43,956,281...43,957,944 		JBrowse link
G Rbmxl2 Rbmx like 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:161,116,768...161,118,249
Ensembl chr 1:161,116,833...161,117,993 		JBrowse link
G Rbmy1j RNA binding motif protein, Y-linked, family 1, member J involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:415,160...425,460
Ensembl chr  Y:415,178...425,426 		JBrowse link
G Sf3b4 splicing factor 3B subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:23636947)
GO_REF:0000118
GO_REF:0000033		 Ensembl
RGD
TreeGrafter
GO_Central		 PMID:23636947 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:183,732,791...183,737,545
Ensembl chr 2:183,732,754...183,737,959 		JBrowse link
G Slc39a5 solute carrier family 39 member 5 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 7:822,873...830,865
Ensembl chr 7:824,818...830,242 		JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:107,088,760...107,097,791
Ensembl chr 6:107,088,403...107,097,791 		JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:95,856,038...95,876,434
Ensembl chr 1:95,856,036...95,876,392 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:12840015) RGD PMID:12840015 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20123736)		 UniProt
RGD		 PMID:20123736 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Tra2a transformer 2 alpha involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:22194695)		 GO_Central
RGD		 PMID:22194695 GO_REF:0000033 NCBI chr 4:78,220,838...78,239,737
Ensembl chr 4:78,220,883...78,239,712 		JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:15009664)
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033
MGI:2176173|MGI:4450919 (PMID:22194695)		 UniProt
RGD
Ensembl
TreeGrafter
GO_Central		 PMID:15009664 PMID:22194695 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249 		JBrowse link
G Tra2b-ps3 transformer 2 beta, pseudogene 3 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:109,634,622...109,636,026
Ensembl chr 3:109,634,101...109,635,593 		JBrowse link
G Zfp64 zinc finger protein 64 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 3:157,666,819...157,695,774
Ensembl chr 3:157,633,211...157,695,809 		JBrowse link
regulation of alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arb2a ARB2 cotranscriptional regulator A involved_in ISO (MGI:6113784|PMID:29311329) RGD PMID:29311329 MGI:6113784 NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162 		JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:32109384)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:32109384 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426 		JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333 		JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO
IBA		 (PMID:11158314)
GO_REF:0000033		 RGD
GO_Central		 PMID:11158314 GO_REF:0000033 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:11158314)
(PMID:19720736)		 RGD PMID:11158314 PMID:19720736 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786 		JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in ISO
IBA		 (PMID:11158314)
GO_REF:0000033		 RGD
GO_Central		 PMID:11158314 GO_REF:0000033 NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322 		JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in ISO
IBA		 (PMID:14761971)
GO_REF:0000033		 RGD
GO_Central		 PMID:14761971 GO_REF:0000033 NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041 		JBrowse link
G Ddx17 DEAD-box helicase 17 involved_in ISO (PMID:23022728)
(MGI:5819339|PMID:23022728)		 RGD PMID:23022728 MGI:5819339 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:21343338), (PMID:23022728)
(MGI:5819339|PMID:23022728)		 RGD PMID:21343338 PMID:23022728 MGI:5819339 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IDA PMID:22767602 UniProt PMID:22767602 RGD:8554210 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057 		JBrowse link
G Fblim1 filamin binding LIM protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:153,883,945...153,915,524
Ensembl chr 5:153,883,960...153,913,757 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISO
IEA
ISS		 (PMID:18653529)
GO_REF:0000118
(MGI:5009520|PMID:18653529)
GO_REF:0000024		 RGD
TreeGrafter
UniProt		 PMID:18653529 GO_REF:0000024 GO_REF:0000118 MGI:5009520 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:25689357) RGD PMID:25689357 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L involved_in ISO
IEA
ISS		 (PMID:25623890)
GO_REF:0000107
(MGI:5441689|PMID:22523384)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22523384 PMID:25623890 GO_REF:0000024 GO_REF:0000107 MGI:5441689 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO		 GO_REF:0000107
GO_REF:0000118
(PMID:22325991)		 Ensembl
TreeGrafter
RGD		 PMID:22325991 GO_REF:0000107 GO_REF:0000118 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISS
IBA
IDA
ISO		 GO_REF:0000024
GO_REF:0000033
PMID:15345239
(PMID:24514149)		 UniProt
GO_Central
RGD		 PMID:24514149 PMID:15345239 GO_REF:0000024 GO_REF:0000033, RGD:1358238 NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180 		JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530 		JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in IDA
IBA
IEA		 PMID:15345239
GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 PMID:15345239 GO_REF:0000033 GO_REF:0000118, RGD:1358238 NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460 		JBrowse link
G Magoh mago homolog, exon junction complex subunit involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22203037)		 UniProt
Ensembl
RGD		 PMID:22203037 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:122,639,268...122,646,650
Ensembl chr 5:122,639,308...122,646,617 		JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in IMP PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368 		JBrowse link
G Mbnl2 muscleblind-like splicing regulator 2 involved_in
acts_upstream_of_or_within		 IMP
ISO		 PMID:31283468
(PMID:19720736)		 RGD PMID:19720736 PMID:31283468 RGD:243049249 NCBI chr15:97,385,278...97,542,924
Ensembl chr15:97,385,244...97,542,937 		JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 PMID:9525963
(PMID:9525963)		 RGD PMID:9525963 PMID:9525963 RGD:8553451 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Nova1 NOVA alternative splicing regulator 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
(MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540)		 UniProt
TreeGrafter
GO_Central
Ensembl
RGD		 PMID:14615540 PMID:17065982 PMID:27223325 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5789071 MGI:6716952 MGI:6718240 NCBI chr 6:63,780,105...63,905,567
Ensembl chr 6:63,783,489...63,906,289 		JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in ISO
IBA		 (PMID:32197073)
GO_REF:0000033
(MGI:3587155|PMID:16041372), (MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540)		 RGD
GO_Central		 PMID:14615540 PMID:16041372 PMID:17065982 PMID:27223325 PMID:32197073 GO_REF:0000033 MGI:3587155 MGI:5789071 MGI:6716952 MGI:6718240 NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021 		JBrowse link
G Nsrp1 nuclear speckle splicing regulatory protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:21296756)		 UniProt
Ensembl
InterPro
RGD		 PMID:21296756 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr10:61,880,807...61,914,471
Ensembl chr10:61,880,825...61,914,471 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO
ISS		 (PMID:16260624), (PMID:21518792)
GO_REF:0000024		 RGD
UniProt		 PMID:16260624 PMID:21518792 GO_REF:0000024 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397 		JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033
GO_REF:0000118		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531 		JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23300487)		 GO_Central
RGD		 PMID:23300487 GO_REF:0000033 NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659 		JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA
IMP		 (MGI:3770484|PMID:17715393), (MGI:5284784|PMID:17101796)
MGI:1926224|MGI:4838182 (PMID:22357600)
GO_REF:0000118
GO_REF:0000033
PMID:37548402
Cacna1c
Fxr1, Mef2a, Mtmr3
Atp2b1, Mef2a
Mcl1
GO_REF:0000107
GO_REF:0000002		 RGD
TreeGrafter
GO_Central
Ensembl
InterPro		 PMID:17101796 PMID:17715393 PMID:22357600 PMID:37548402 PMID:28993448 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3770484 MGI:5284784, RGD:401901235, RGD:329848961, RGD:329845874, RGD:329845873, RGD:329845872 NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691 		JBrowse link
G Rbfox3 RNA binding fox-1 homolog 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,720,355...104,157,277
Ensembl chr10:103,720,636...104,156,935 		JBrowse link
G Rbm11 RNA binding motif protein 11 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21984414)
GO_REF:0000033		 RGD
GO_Central		 PMID:21984414 GO_REF:0000033 NCBI chr11:14,234,851...14,244,092
Ensembl chr11:14,234,890...14,244,090 		JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in ISO
IBA		 (PMID:26575292)
GO_REF:0000033
(MGI:6158801|PMID:25468569)		 RGD
GO_Central		 PMID:25468569 PMID:26575292 GO_REF:0000033 MGI:6158801 NCBI chr 2:194,945,974...194,954,498
Ensembl chr 2:194,945,974...194,954,703 		JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO
IBA		 (PMID:16129689)
GO_REF:0000033		 RGD
GO_Central		 PMID:16129689 GO_REF:0000033 NCBI chr 8:107,543,613...107,546,678
Ensembl chr 8:107,525,898...107,551,696 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
IDA		 PMID:33805770
PMID:27289039		 UniProt PMID:33805770 PMID:27289039 RGD:152995553, RGD:152995577 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA
IEA
IDA		 (PMID:26844700), (PMID:26990106), (PMID:29104163)
GO_REF:0000033
GO_REF:0000118
PMID:27289039
(MGI:6148527|PMID:25313962)		 RGD
GO_Central
TreeGrafter		 PMID:25313962 PMID:26844700 PMID:26990106 PMID:29104163 PMID:27289039 GO_REF:0000033 GO_REF:0000118 MGI:6148527, RGD:152995577 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rbm25 RNA binding motif protein 25 involved_in ISO
IBA		 (PMID:18663000)
GO_REF:0000033		 RGD
GO_Central		 PMID:18663000 GO_REF:0000033 NCBI chr 6:103,271,775...103,319,090
Ensembl chr 6:103,271,801...103,317,854 		JBrowse link
G Rbm25l1 RNA binding motif protein 25-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:10,267,026...10,270,510
Ensembl chr10:10,267,260...10,269,710 		JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:12628928), (PMID:16260624), (PMID:16777844), (PMID:16934801), (PMID:21518792)
MGI:5467987|MGI:5467988 (PMID:23129807)		 RGD PMID:12628928 PMID:16260624 PMID:16777844 PMID:16934801 PMID:21518792 More... NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:31358901) RGD PMID:31358901 NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431 		JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in ISO
IEA
ISS		 (PMID:18840686), (PMID:18951082)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18840686 PMID:18951082 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430 		JBrowse link
G Rbm7 RNA binding motif protein 7 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 8:48,831,894...48,838,399
Ensembl chr 8:48,831,894...48,838,411 		JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISS
ISO		 GO_REF:0000024
(PMID:22203037)		 UniProt
RGD		 PMID:22203037 GO_REF:0000024 NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959 		JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in ISO (PMID:12165565), (PMID:12761049) RGD PMID:12165565 PMID:12761049 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743 		JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859 		JBrowse link
G Rbpms RNA binding protein, mRNA processing factor involved_in IMP PMID:37548402 UniProt PMID:37548402 RGD:401901235 NCBI chr16:58,239,370...58,395,424
Ensembl chr16:58,239,474...58,395,426 		JBrowse link
G Rbpms2 RNA binding protein, mRNA processing factor 2 involved_in IDA PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr 8:66,153,169...66,184,278
Ensembl chr 8:66,153,593...66,184,268 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:6201823|PMID:21884984)		 UniProt
RGD		 PMID:21884984 GO_REF:0000024 MGI:6201823 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS		 (PMID:22203037)
GO_REF:0000024		 RGD
UniProt		 PMID:22203037 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858 		JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:20966198), (PMID:22203037) RGD PMID:20966198 PMID:22203037 NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038
Ensembl chr10:31,943,230...31,950,038 		JBrowse link
G Sf3a1 splicing factor 3A subunit 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144 		JBrowse link
G Smndc1 survival motor neuron domain containing 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:252,389,675...252,400,749
Ensembl chr 1:252,389,673...252,401,616 		JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:55,856,691...55,875,262
Ensembl chr 5:55,856,246...55,875,300 		JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:29961578)
MGI:1856676 (PMID:23055939)
(MGI:6201863|PMID:25727884)		 RGD PMID:23055939 PMID:25727884 PMID:29961578 MGI:6201863 NCBI chr12:39,998,975...40,158,897
Ensembl chr12:39,999,488...40,155,725 		JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778 		JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 acts_upstream_of_or_within ISO (PMID:21470964) RGD PMID:21470964 NCBI chr10:102,052,158...102,055,365
Ensembl chr10:102,052,314...102,055,338 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:23132731)
(PMID:24440982)		 UniProt
RGD		 PMID:23132731 PMID:24440982 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS		 (PMID:20932480)
GO_REF:0000024		 RGD
UniProt		 PMID:20932480 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in ISO (PMID:14966131), (PMID:17580305)
(MGI:6827199|PMID:11514562), (MGI:6827311|PMID:10938105)		 RGD PMID:10938105 PMID:11514562 PMID:14966131 PMID:17580305 MGI:6827199 MGI:6827311 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586 		JBrowse link
G Tra2b transformer 2 beta involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12165565), (PMID:12761049), (PMID:25689357)		 UniProt
Ensembl
RGD		 PMID:12165565 PMID:12761049 PMID:25689357 GO_REF:0000024 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249 		JBrowse link
G Wtap WT1 associated protein involved_in ISO
IBA		 (PMID:24407421)
GO_REF:0000033		 RGD
GO_Central		 PMID:24407421 GO_REF:0000033 NCBI chr 1:47,665,965...47,691,067
Ensembl chr 1:47,665,965...47,691,065 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:29799838)
GO_REF:0000118
GO_REF:0000033		 Ensembl
RGD
TreeGrafter
GO_Central		 PMID:29799838 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO
ISS
IEA		 (PMID:24514149)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:24514149 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539 		JBrowse link
regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Hnrnpk-ps1 heterogeneous nuclear ribonucleoprotein K, pseudogene 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr14:91,756,628...91,758,358
Ensembl chr14:91,756,837...91,758,227 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in ISO
IEA
ISS		 (PMID:19574390)
GO_REF:0000107
(MGI:4940413|PMID:21300889)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19574390 PMID:21300889 GO_REF:0000024 GO_REF:0000107 MGI:4940413 NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182 		JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISO (MGI:5302133|PMID:22196734) RGD PMID:22196734 MGI:5302133 NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180 		JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in ISO (MGI:5302133|PMID:22196734) RGD PMID:22196734 MGI:5302133 NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530 		JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in ISO (MGI:5302133|PMID:22196734) RGD PMID:22196734 MGI:5302133 NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460 		JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO
ISS		 (PMID:32017898)
(MGI:6400674|PMID:32017896)
GO_REF:0000024		 RGD
UniProt		 PMID:32017896 PMID:32017898 GO_REF:0000024 MGI:6400674 NCBI chr 2:215,997,641...216,012,833
Ensembl chr 2:215,997,649...216,012,865 		JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220 		JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in
NOT|involved_in		 ISO (PMID:28525753)
(MGI:6114846|PMID:29262316)		 RGD PMID:28525753 PMID:29262316 MGI:6114846 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(MGI:6108922|PMID:29021242), (MGI:6504661|PMID:33397958), (MGI:6514532|PMID:33378678), (MGI:7485690|PMID:36627242)
(PMID:27029405), (PMID:31331967)
(PMID:34428287)
GO_REF:0000107		 UniProt
TreeGrafter
GO_Central
RGD
Ensembl		 PMID:27029405 PMID:29021242 PMID:31331967 PMID:33378678 PMID:33397958 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:6108922 MGI:6504661 MGI:6514532 MGI:7485690 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO (PMID:26604136), (PMID:27496873), (PMID:30948719), (PMID:32840935)
(PMID:33188278)		 RGD PMID:26604136 PMID:27496873 PMID:30948719 PMID:32840935 PMID:33188278 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060 		JBrowse link
G Rbm39 RNA binding motif protein 39 involved_in ISO (PMID:15694343), (PMID:28302793), (PMID:28437394) RGD PMID:15694343 PMID:28302793 PMID:28437394 NCBI chr 3:144,662,998...144,696,222
Ensembl chr 3:144,663,001...144,696,213 		JBrowse link
G Sf1 splicing factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330 		JBrowse link
G Son SON DNA and RNA binding protein involved_in ISO
IBA		 (PMID:21504830)
GO_REF:0000033		 RGD
GO_Central		 PMID:21504830 GO_REF:0000033 NCBI chr11:30,850,890...30,923,167
Ensembl chr11:30,892,005...30,923,167 		JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:147,559,515...147,591,895
Ensembl chr 5:147,559,514...147,591,849 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:26876937) RGD PMID:26876937 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768 		JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 involved_in ISO (PMID:26876937), (PMID:32440474) RGD PMID:26876937 PMID:32440474 NCBI chr20:7,091,928...7,101,860
Ensembl chr20:7,091,910...7,101,078 		JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in ISO (PMID:11106748), (PMID:7488725) RGD PMID:7488725 PMID:11106748 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO
ISS		 (PMID:26876937), (PMID:28984244)
GO_REF:0000024		 RGD
UniProt		 PMID:26876937 PMID:28984244 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028 		JBrowse link
spliceosomal complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crnkl1 crooked neck pre-mRNA splicing factor 1 involved_in ISO
IBA
IEA
ISS		 (PMID:12084575)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:12084575 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302
Ensembl chr 6:133,337,039...133,354,302 		JBrowse link
G Ddx39b DExD-box helicase 39B involved_in ISO
IEA		 (PMID:18593880)
GO_REF:0000107		 RGD
Ensembl		 PMID:18593880 GO_REF:0000107 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G ENSRNOG00000068450 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 4:20,872,522...20,874,013 JBrowse link
G ENSRNOG00000069795 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 4:21,024,128...21,025,619 JBrowse link
G Gcfc2 GC-rich sequence DNA-binding factor 2 involved_in ISO (PMID:24304693) RGD PMID:24304693 NCBI chr 4:114,481,613...114,519,268
Ensembl chr 4:114,481,607...114,519,962 		JBrowse link
G Gemin2 gem (nuclear organelle) associated protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153 		JBrowse link
G Gemin6 gem (nuclear organelle) associated protein 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612 		JBrowse link
G LOC102548514 crooked neck-like protein 1-like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 6:1,140,615...1,142,918 JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO
IEA		 (PMID:16332694)
GO_REF:0000107		 RGD
Ensembl		 PMID:16332694 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18951082)		 UniProt
Ensembl
RGD		 PMID:18951082 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430 		JBrowse link
G Rsrp1 arginine and serine rich protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:34042961)		 UniProt
RGD		 PMID:34042961 GO_REF:0000024 NCBI chr 5:147,147,774...147,151,523
Ensembl chr 5:147,147,784...147,151,523 		JBrowse link
G Scaf11 SR-related CTD-associated factor 11 involved_in ISO
IBA		 (PMID:9447963)
GO_REF:0000033		 RGD
GO_Central		 PMID:9447963 GO_REF:0000033 NCBI chr 7:127,571,678...127,624,089
Ensembl chr 7:127,574,463...127,624,101 		JBrowse link
G Sf3a2 splicing factor 3A subunit 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300 		JBrowse link
G Smn1 survival of motor neuron 1, telomeric involved_in ISO (PMID:9845364) RGD PMID:9845364 NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060 		JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:6,645,809...6,682,448
Ensembl chr20:6,645,809...6,682,134 		JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO
IBA		 (PMID:9472028)
GO_REF:0000033
(MGI:1195449|PMID:9446799)		 RGD
GO_Central		 PMID:9446799 PMID:9472028 GO_REF:0000033 MGI:1195449 NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990 		JBrowse link
G Srpk3 SRSF protein kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:151,510,452...151,515,208
Ensembl chr  X:151,510,539...151,515,198 		JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492 		JBrowse link
G Usp39 ubiquitin specific peptidase 39 involved_in ISO (PMID:11350945) RGD PMID:11350945 NCBI chr 4:104,373,948...104,406,359
Ensembl chr 4:104,373,955...104,406,359 		JBrowse link
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 involved_in ISO (PMID:21041408) RGD PMID:21041408 NCBI chr  X:30,547,424...30,571,613
Ensembl chr  X:30,547,536...30,570,125 		JBrowse link
spliceosomal complex disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx8 DEAH-box helicase 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:86,667,641...86,704,198
Ensembl chr10:86,667,834...86,705,137 		JBrowse link
G Dnajc17 DnaJ heat shock protein family (Hsp40) member C17 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:106,162,197...106,195,771
Ensembl chr 3:106,162,197...106,195,751 		JBrowse link
G ENSRNOG00000069569 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 6:99,317,218...99,319,223 JBrowse link
G Tfip11 tuftelin interacting protein 11 involved_in ISO
IEA
IBA
ISS		 (PMID:19103666)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000002
(MGI:5545993|PMID:19857462)
GO_REF:0000024		 RGD
TreeGrafter
GO_Central
InterPro
UniProt		 PMID:19103666 PMID:19857462 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5545993 NCBI chr12:44,299,619...44,311,851
Ensembl chr12:44,299,622...44,311,855 		JBrowse link
spliceosomal snRNP assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G Clns1a chloride nucleotide-sensitive channel 1A involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000002
(PMID:18984161)		 UniProt
GO_Central
TreeGrafter
InterPro
RGD		 PMID:18984161 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661 		JBrowse link
G Coil coilin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:73,789,077...73,810,378
Ensembl chr10:73,789,488...73,810,393 		JBrowse link
G Ddx20 DEAD-box helicase 20 involved_in ISO
IBA		 (PMID:12067652), (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr 2:193,158,761...193,168,484
Ensembl chr 2:193,158,823...193,166,774 		JBrowse link
G ENSRNOG00000063060 involved_in IEA GO_REF:0000002
GO_REF:0000118		 InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 Ensembl chr 6:84,273,587...84,274,496 JBrowse link
G ENSRNOG00000063288 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr14:32,635,911...32,636,620 JBrowse link
G ENSRNOG00000063333 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:93,293,758...93,294,114 JBrowse link
G ENSRNOG00000063412 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr  X:133,163,165...133,163,784 JBrowse link
G ENSRNOG00000064062 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr19:33,454,456...33,455,388 JBrowse link
G ENSRNOG00000066758 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:14,995,412...14,996,454 JBrowse link
G ENSRNOG00000068015 involved_in IEA GO_REF:0000002
GO_REF:0000118		 InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 Ensembl chr  X:133,878,251...133,878,959 JBrowse link
G ENSRNOG00000068876 involved_in IEA GO_REF:0000002
GO_REF:0000118		 InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 Ensembl chr 9:112,301,511...112,302,585 JBrowse link
G Gemin2 gem (nuclear organelle) associated protein 2 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:12067652), (PMID:18984161), (PMID:31799625)		 UniProt
GO_Central
RGD		 PMID:12067652 PMID:18984161 PMID:31799625 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153 		JBrowse link
G Gemin4 gem (nuclear organelle) associated protein 4 involved_in ISO
IBA		 (PMID:12067652), (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr10:61,062,420...61,073,529
Ensembl chr10:61,066,425...61,073,431
Ensembl chr10:61,066,425...61,073,431 		JBrowse link
G Gemin5 gem (nuclear organelle) associated protein 5 involved_in ISO
IBA		 (PMID:12067652), (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr10:42,295,729...42,342,902
Ensembl chr10:42,297,515...42,342,892 		JBrowse link
G Gemin6 gem (nuclear organelle) associated protein 6 involved_in ISO
IBA		 (PMID:12067652), (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612 		JBrowse link
G Gemin7 gem (nuclear organelle) associated protein 7 involved_in ISO
IBA		 (PMID:12067652), (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr 1:79,215,054...79,228,769
Ensembl chr 1:79,214,919...79,224,994 		JBrowse link
G Gemin7l1 gem (nuclear organelle) associated protein 7-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:78,269,910...78,270,681
Ensembl chr 4:78,269,888...78,270,669 		JBrowse link
G Gemin8 gem (nuclear organelle) associated protein 8 involved_in ISO
IBA		 (PMID:12067652), (PMID:16434402), (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:12067652 PMID:16434402 PMID:18984161 GO_REF:0000033 NCBI chr  X:28,259,806...28,278,641
Ensembl chr  X:28,259,793...28,278,663 		JBrowse link
G Glod4 glyoxalase domain containing 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:61,077,535...61,095,876
Ensembl chr10:61,066,421...61,095,898 		JBrowse link
G LOC108350623 small nuclear ribonucleoprotein F-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:155,116,497...155,116,945 JBrowse link
G LOC108352309 small nuclear ribonucleoprotein F-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:33,533,614...33,533,927
Ensembl chr11:33,533,512...33,533,871 		JBrowse link
G LOC120099250 U1 small nuclear ribonucleoprotein C-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr  X:135,673,708...135,678,865 JBrowse link
G LOC120100604 small nuclear ribonucleoprotein G-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:186,400,521...186,402,953
Ensembl chr 2:186,400,857...186,401,087 		JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in ISO (PMID:17709427) RGD PMID:17709427 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296 		JBrowse link
G Prmt7 protein arginine methyltransferase 7 involved_in ISO
IEA
ISS		 (PMID:17709427)
GO_REF:0000104
GO_REF:0000024		 RGD
UniProt		 PMID:17709427 GO_REF:0000024 GO_REF:0000104 NCBI chr19:34,110,724...34,161,531
Ensembl chr19:34,110,747...34,162,577 		JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in ISS
ISO		 GO_REF:0000024
(PMID:12077342)		 UniProt
RGD		 PMID:12077342 GO_REF:0000024 NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625 		JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in
NOT|involved_in		 ISO (PMID:14749385), (PMID:15314151)
(PMID:15314151)		 RGD PMID:14749385 PMID:15314151 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
G Smn1 survival of motor neuron 1, telomeric involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:12067652), (PMID:18984161)		 UniProt
GO_Central
RGD		 PMID:12067652 PMID:18984161 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 involved_in ISO
ISS		 (PMID:18984161)
GO_REF:0000024		 RGD
UniProt		 PMID:18984161 GO_REF:0000024 NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339 		JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C involved_in ISO
IEA		 (PMID:8972845)
GO_REF:0000104		 RGD
UniProt		 PMID:8972845 GO_REF:0000104 NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide involved_in ISO
IBA		 (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:18984161 GO_REF:0000033 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide involved_in ISO
IBA		 (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:18984161 GO_REF:0000033 NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide involved_in ISO
IBA		 (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:18984161 GO_REF:0000033 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978 		JBrowse link
G Snrpd3l1 small nuclear ribonucleoprotein D3 polypeptide like 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:12,396,026...12,396,454
Ensembl chr19:12,396,026...12,396,454 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E involved_in ISO
IBA		 (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:18984161 GO_REF:0000033 NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310 		JBrowse link
G Snrpepl2 small nuclear ribonucleoprotein polypeptide E like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F involved_in ISO (PMID:18984161) RGD PMID:18984161 NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G involved_in ISO
IEA		 (PMID:18984161)
GO_REF:0000104		 RGD
UniProt		 PMID:18984161 GO_REF:0000104 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 		JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118 		JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(PMID:12067652), (PMID:18984161)		 UniProt
TreeGrafter
GO_Central
RGD		 PMID:12067652 PMID:18984161 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828 		JBrowse link
G Tdrd6 tudor domain containing 6 involved_in ISO (MGI:5904379|PMID:28263986) RGD PMID:28263986 MGI:5904379 NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344 		JBrowse link
G Tssc4 tumor suppressing subtransferable candidate 4 involved_in ISO
ISS		 (PMID:35188580)
GO_REF:0000024		 RGD
UniProt		 PMID:35188580 GO_REF:0000024 NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980 		JBrowse link
G Zfp341 zinc finger protein 341 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249 		JBrowse link
spliceosomal tri-snRNP complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aar2 AAR2 splicing factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:145,057,368...145,079,838
Ensembl chr 3:145,057,458...145,080,166 		JBrowse link
G Linc00176 long intergenic non-protein coding RNA 176 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:168,771,350...168,775,133
Ensembl chr 3:168,704,299...168,774,991 		JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:10523320) RGD PMID:10523320 NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20595234)		 UniProt
Ensembl
RGD		 PMID:20595234 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Prpf3 pre-mRNA processing factor 3 involved_in ISO (PMID:20595234) RGD PMID:20595234 NCBI chr 2:183,379,041...183,403,526
Ensembl chr 2:183,378,718...183,403,489 		JBrowse link
G Prpf31 pre-mRNA processing factor 31 acts_upstream_of_or_within
involved_in		 ISO (PMID:11867543)
(PMID:15257298), (PMID:20118938)		 RGD PMID:11867543 PMID:15257298 PMID:20118938 NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873 		JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:20118938)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20118938 GO_REF:0000024 GO_REF:0000107 NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625 		JBrowse link
G Prpf6 pre-mRNA processing factor 6 involved_in IEA
ISO
ISS
IBA		 GO_REF:0000107
(PMID:15257298), (PMID:20118938)
GO_REF:0000024
GO_REF:0000118
GO_REF:0000033		 Ensembl
RGD
UniProt
TreeGrafter
GO_Central		 PMID:15257298 PMID:20118938 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 involved_in ISO
IBA		 (PMID:20595234)
GO_REF:0000033		 RGD
GO_Central		 PMID:20595234 GO_REF:0000033 NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606 		JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO (PMID:12032085), (PMID:20595234) RGD PMID:12032085 PMID:20595234 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
G Tssc4 tumor suppressing subtransferable candidate 4 involved_in ISO
IEA
ISS		 (PMID:34131137)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:34131137 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980 		JBrowse link
G Usp4 ubiquitin specific peptidase 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20595234)		 UniProt
RGD		 PMID:20595234 GO_REF:0000024 NCBI chr 8:109,035,402...109,079,382
Ensembl chr 8:109,036,099...109,080,427 		JBrowse link
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 involved_in ISO
IBA
IEA		 (PMID:35241646)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:35241646 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182 		JBrowse link
U2-type prespliceosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx42 DEAD-box helicase 42 involved_in ISO (PMID:36797247) RGD PMID:36797247 NCBI chr10:91,148,926...91,180,940
Ensembl chr10:91,148,254...91,180,939 		JBrowse link
G Ddx46 DEAD-box helicase 46 involved_in ISS
ISO		 GO_REF:0000024
(PMID:36797247)		 UniProt
RGD		 PMID:36797247 GO_REF:0000024 NCBI chr17:8,942,070...8,988,440
Ensembl chr17:8,944,454...8,988,439 		JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 involved_in ISO (PMID:32494006), (PMID:34822310) RGD PMID:32494006 PMID:34822310 NCBI chr  X:134,935,426...134,949,607
Ensembl chr  X:134,935,426...134,949,607 		JBrowse link
G Sf3a1 splicing factor 3A subunit 1 involved_in ISO (PMID:10882114), (PMID:11533230) RGD PMID:10882114 PMID:11533230 NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144 		JBrowse link
G Sf3a2 splicing factor 3A subunit 2 involved_in ISO
ISS		 (PMID:11533230)
GO_REF:0000024		 RGD
UniProt		 PMID:11533230 GO_REF:0000024 NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530 		JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 involved_in ISO (PMID:11533230) RGD PMID:11533230 NCBI chr 5:136,967,713...136,987,345
Ensembl chr 5:136,967,691...136,987,361 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    metabolic process 11720
      organic substance metabolic process 11221
        organic substance biosynthetic process 8290
          macromolecule biosynthetic process 7370
            gene expression 6922
              RNA processing 1017
                RNA splicing 467
                  RNA splicing, via transesterification reactions 351
                    RNA splicing, via transesterification reactions with bulged adenosine as nucleophile + 351
                    RNA splicing, via transesterification reactions with guanosine as nucleophile + 0
Path 2
Term Annotations click to browse term
  biological_process 20292
    cellular process 18769
      cellular metabolic process 10279
        cellular aromatic compound metabolic process 5937
          nucleobase-containing compound metabolic process 5696
            nucleic acid metabolic process 5103
              RNA metabolic process 4506
                RNA processing 1017
                  RNA splicing 467
                    RNA splicing, via transesterification reactions 351
                      RNA splicing, via transesterification reactions with bulged adenosine as nucleophile + 351
                      RNA splicing, via transesterification reactions with guanosine as nucleophile + 0
paths to the root