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ONTOLOGY REPORT - ANNOTATIONS

Term:neural crest formation
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Accession:GO:0014029 term browser browse the term
Definition:The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.


show annotations for term's descendants           Sort by:
neural crest formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRD chordin involved_in ISO (PMID:17685487) MGI PMID:17685487 NCBI chr 3:184,380,054...184,390,739
Ensembl chr 3:184,380,054...184,390,736 		JBrowse link
G KBTBD8 kelch repeat and BTB domain containing 8 involved_in IMP (PMID:26399832) UniProt PMID:26399832 NCBI chr 3:66,998,307...67,011,210
Ensembl chr 3:66,998,307...67,011,210 		JBrowse link
G KLHL12 kelch like family member 12 involved_in IMP (PMID:27716508) UniProt PMID:27716508 NCBI chr 1:202,891,120...202,928,599
Ensembl chr 1:202,891,116...202,928,636 		JBrowse link
G LRP6 LDL receptor related protein 6 involved_in IDA (PMID:11029007) BHF-UCL PMID:11029007 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044 		JBrowse link
G NOLC1 nucleolar and coiled-body phosphoprotein 1 involved_in IMP (PMID:26399832) UniProt PMID:26399832 NCBI chr10:102,152,389...102,163,870
Ensembl chr10:102,152,176...102,163,871 		JBrowse link
G PDCD6 programmed cell death 6 involved_in IMP (PMID:27716508) UniProt PMID:27716508 NCBI chr 5:271,646...314,974
Ensembl chr 5:271,621...314,974 		JBrowse link
G PEF1 penta-EF-hand domain containing 1 involved_in IMP (PMID:27716508) UniProt PMID:27716508 NCBI chr 1:31,629,866...31,644,876
Ensembl chr 1:31,629,866...31,644,896 		JBrowse link
G POLR1B RNA polymerase I subunit B involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:112,542,036...112,579,818
Ensembl chr 2:112,541,915...112,579,818 		JBrowse link
G TCOF1 treacle ribosome biogenesis factor 1 involved_in IMP (PMID:26399832) UniProt PMID:26399832 NCBI chr 5:150,357,697...150,400,293
Ensembl chr 5:150,357,629...150,400,308 		JBrowse link
negative regulation of neural crest formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FUZ fuzzy planar cell polarity protein involved_in ISS UniProt GO_REF:0000024 NCBI chr19:49,806,866...49,813,553
Ensembl chr19:49,806,866...49,817,376 		JBrowse link
neural crest cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,230,516...12,297,194
Ensembl chr 6:12,290,361...12,297,194 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20130188) Ensembl
MGI		 PMID:20130188 GO_REF:0000107 NCBI chr 8:41,261,962...41,309,473
Ensembl chr 8:41,261,962...41,309,473 		JBrowse link
G WNT8A Wnt family member 8A involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 5:138,077,367...138,092,365
Ensembl chr 5:138,083,990...138,092,365 		JBrowse link
neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSC goosecoid homeobox involved_in IMP (PMID:24290375) UniProt PMID:24290375 NCBI chr14:94,768,223...94,770,113
Ensembl chr14:94,768,223...94,770,113 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
regulation of neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A NOT|involved_in ISO (PMID:15073157) BHF-UCL PMID:15073157 NCBI chr10:86,755,763...86,932,844
Ensembl chr10:86,755,786...86,932,825 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19715
    developmental process 7682
      anatomical structure formation involved in morphogenesis 1475
        neural crest formation 17
          negative regulation of neural crest formation + 1
          neural crest cell fate commitment + 7
          positive regulation of neural crest formation + 0
          regulation of neural crest formation + 2
Path 2
Term Annotations click to browse term
  biological_process 19715
    developmental process 7682
      anatomical structure development 7083
        multicellular organism development 5689
          embryo development 1400
            embryo development ending in birth or egg hatching 905
              chordate embryonic development 882
                neural crest formation 17
                  negative regulation of neural crest formation + 1
                  neural crest cell fate commitment + 7
                  positive regulation of neural crest formation + 0
                  regulation of neural crest formation + 2
paths to the root