D20Yum61 Marker Search Result - Rat Genome Database

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Marker: D20Yum61

Symbol: D20Yum61
Previously known as: UniSTS:526110; 
RGD ID: 2303211
Expected Size: 166 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2204,099,411 - 4,099,577 (-)MAPPERmRatBN7.2
Rnor_6.0204,413,628 - 4,413,793NCBIRnor6.0
Rnor_5.0206,492,984 - 6,493,149UniSTSRnor5.0
RGSC_v3.4204,200,675 - 4,200,840UniSTSRGSC3.4
Celera203,930,624 - 3,930,789UniSTS
Cytogenetic Map20p12UniSTS
Is Marker For: Genes:   Fkbpl   Atf6b   Whr1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines
2. An informative set of SSLP markers and genomic profiles in the rat MHC, the RT1 complex. Takagi Y, etal., Immunogenetics. 2008 Dec 24.


 
Forward Primer AATGCAATCCAGATCCTTGC
Reverse Primer CAAGAGGATCTCAGCCTGGT
 
GenBank Nucleotide BX883044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474121.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61472Aia1Adjuvant induced arthritis QTL 1180.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)2026463954597031Rat
2306850Pia40Pristane induced arthritis QTL 400.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)2015279595304575Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20153065546530655Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20289259726381954Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126123605Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600972Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20152784246527842Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124159021Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125159026Rat
61448Ciaa1CIA Autoantibody QTL 1300.001blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)2026463954597031Rat

1 to 10 of 24 rows


Database
Acc Id
Source(s)
NCBI Gene 361800 UniSTS
  406168 UniSTS
  406169 UniSTS