Genes in Region
41288091 RT1-O1l1 RT1 class Ib, locus O1 like 1 20 2624073 2658023 Rat 1595920 RT1-S2 RT1 class Ib, locus S2 20 2650233 2651654 Rat 1595735 Rps2-ps1 ribosomal protein S2, pseudogene 1 20 2653958 2654686 Rat 3501 RT1-O1 RT1 class Ib, locus O1 20 2655116 2657520 Rat 1598370 RT1-N3 RT1 class Ib, locus N3 20 2659132 2665536 Rat 735037 RT1-S3 RT1 class Ib, locus S3 20 2670654 2675411 Rat 1598233 RT1-T24-4 RT1 class I, locus T24, gene 4 20 2684515 2747878 Rat 727839 LOC360231 MHC class I RT1.O type 149 processed pseudogene 20 2684559 2743176 Rat 1594425 2361ex4-5 class I gene fragment 2361 20 2693975 2694324 Rat 1594426 Rpl41-ps1 ribosomal protein L41, pseudogene 1 20 2704456 2704840 Rat 41100225 LOC120098968 uncharacterized LOC120098968 20 2708198 2732345 Rat 1624211 RT1-T24-3 RT1 class I, locus T24, gene 3 20 2718210 2730604 Rat 1594427 2331ex4-5 class I gene fragment 2331 20 2724234 2724758 Rat 1303033 RT1-T24-2 RT1 class I, locus T24, gene 2 20 2734415 2738899 Rat 1594428 2310ex4-5 class I gene fragment 2310 20 2745391 2745740 Rat 1359499 RT1-T24-1 RT1 class I, locus T24, gene 1 20 2761495 2774871 Rat 1303051 Gnl1 G protein nucleolar 1 20 2783130 2792115 Rat 1303270 Prr3 proline rich 3 20 2792868 2799865 Rat 620286 Abcf1 ATP binding cassette subfamily F member 1 20 2802519 2815433 Rat 2325510 Mir877 microRNA 877 20 2811476 2811560 Rat 620079 Ppp1r10 protein phosphatase 1, regulatory subunit 10 20 2822995 2838125 Rat 1302998 Mrps18b mitochondrial ribosomal protein S18B 20 2838174 2844260 Rat 1303066 Atat1 alpha tubulin acetyltransferase 1 20 2844595 2857809 Rat 1302996 C20h6orf136 similar to human chromosome 6 open reading frame 136 20 2857840 2861952 Rat 1302963 Dhx16 DEAH-box helicase 16 20 2862000 2874991 Rat 1309543 Ppp1r18 protein phosphatase 1, regulatory subunit 18 20 2877567 2887526 Rat 7489035 Mir6328 microRNA 6328 20 2885300 2885396 Rat 1302966 Nrm nurim 20 2888321 2892804 Rat 1559468 Mdc1 mediator of DNA damage checkpoint 1 20 2893693 2912394 Rat 628596 Tubb5 tubulin, beta 5 class I 20 2912779 2916928 Rat 70991 Flot1 flotillin 1 20 2917864 2927993 Rat 1303321 Ier3 immediate early response 3 20 2928378 2929582 Rat 7678499 LOC102553505 uncharacterized LOC102553505 20 2962029 2972097 Rat 2313830 Cb707485 hypothetical LOC100310783 20 3021390 3024364 Rat 2252 Ddr1 discoidin domain receptor tyrosine kinase 1 20 3042494 3064442 Rat 1303309 Gtf2h4 general transcription factor 2H subunit 4 20 3071328 3076990 Rat 1303122 Vars2 valyl-tRNA synthetase 2, mitochondrial 20 3077132 3087994 Rat 1303180 Sfta2 surfactant associated 2 20 3093569 3094299 Rat 1303125 Mucl3 mucin like 3 20 3100652 3108569 Rat 1302953 CB741658 CB741658 gene 20 3119050 3122302 Rat 41289706 LOC120098824 uncharacterized LOC120098824 20 3150755 3162973 Rat 2324335 Mt2-ps1 metallothionein 2, pseudogene 1 20 3159037 3159409 Rat 1562885 C20h6orf15 similar to human chromosome 6 open reading frame 15 20 3172330 3173886 Rat 41360741 LOC120098827 uncharacterized LOC120098827 20 3178887 3183700 Rat 1598543 Cdsn corneodesmosin 20 3179432 3184252 Rat 1594430 Rpl22-ps1 ribosomal protein L22, pseudogene 1 20 3190148 3190745 Rat 1591981 Psors1c2 psoriasis susceptibility 1 candidate 2 20 3202178 3203599 Rat 1302992 Cchcr1 coiled-coil alpha-helical rod protein 1 20 3205675 3218437 Rat 1302974 Tcf19 transcription factor 19 20 3218756 3222861 Rat 1359491 Pou5f1 POU class 5 homeobox 1 20 3223128 3227891 Rat 1359403 RT1-CE16 RT1 class I, locus CE16 20 3257109 3260747 Rat 11357632 LOC108353253 uncharacterized LOC108353253 20 3260697 3290136 Rat 1594403 Cdk2ap1-ps8 Cdk2ap1-ps8 pseudogene 20 3267905 3268051 Rat 1359630 RT1-CE15 RT1 class I, locus CE15 20 3275575 3279074 Rat 41066463 LOC120098828 uncharacterized LOC120098828 20 3279075 3280604 Rat 1594404 LOC224733l-9 LOC224733l-9 pseudogene 20 3282495 3282800 Rat 1594405 Cdk2ap1-ps7 Cdk2ap1-ps7 pseudogene 20 3289606 3289752 Rat 1359342 RT1-CE14 RT1 class I, locus CE14 20 3296654 3300795 Rat 1359196 RT1-CE13 RT1 class I, locus CE13 20 3314830 3318106 Rat 41203922 LOC120098829 uncharacterized LOC120098829 20 3318051 3324485 Rat 1594406 Cdk2ap1-ps6 Cdk2ap1-ps6 pseudogene 20 3326166 3327363 Rat 1594407 Vps52-ps7 VPS52 subunit of GARP complex, pseudogene 7 20 3330746 3331375 Rat 1594408 Vps52-ps6 VPS52 subunit of GARP complex, pseudogene 6 20 3331461 3331539 Rat 1594409 Vps52-ps5 VPS52 subunit of GARP complex, pseudogene 5 20 3331728 3332881 Rat 1359103 RT1-CE12 RT1 class I, locus CE12 20 3338907 3342547 Rat 1359483 RT1-CE11 RT1 class I, locus CE11 20 3355393 3358520 Rat 41049112 LOC120098832 uncharacterized LOC120098832 20 3358829 3382786 Rat 1594410 LOC224733l-8 LOC224733l-8 pseudogene 20 3361930 3362233 Rat 1594411 Cdk2ap1-ps5 Cdk2ap1-ps5 pseudogene 20 3369047 3369193 Rat 1359292 RT1-CE10 RT1 class I, locus CE10 20 3377284 3380301 Rat 1594412 LOC224733l-7 LOC224733l-7 pseudogene 20 3383163 3383468 Rat 1595868 RT1-CE5 RT1 class I, locus CE5 20 3403418 3479476 Rat 1594413 RT1-CE9-ps1 RT1 class I, locus CE9, pseudogene 1 20 3403655 3406844 Rat 1594414 RT1-CE8-ps1 RT1 class I, locus CE8, pseudogene 1 20 3418265 3421623 Rat 1594415 LOC224733l-6 LOC224733l-6 pseudogene 20 3423642 3423957 Rat 1594416 Cdk2ap1-ps4 Cdk2ap1-ps4 pseudogene 20 3428927 3430126 Rat 1598234 RT1-CE4 RT1 class I, locus CE4 20 3431509 3504535 Rat 1595786 RT1-CE7 RT1 class I, locus CE7 20 3434205 3437152 Rat 41176734 LOC120098833 uncharacterized LOC120098833 20 3437373 3439343 Rat 1594417 LOC224733l-5 LOC224733l-5 pseudogene 20 3439723 3440020 Rat 1303017 RT1-CE6 RT1 class I, locus CE6 20 3460979 3461929 Rat 1594418 Vps52-ps4 VPS52 subunit of GARP complex, pseudogene 4 20 3468035 3469175 Rat 1594419 LOC224733l-4 LOC224733l-4 pseudogene 20 3482894 3483196 Rat 1594420 Cdk2ap1-ps3 Cdk2ap1-ps3 pseudogene 20 3493095 3493240 Rat 1594421 LOC224733l-3 LOC224733l-3 pseudogene 20 3507974 3508279 Rat 1598231 RT1-CE3 RT1 class I, locus CE3 20 3516647 3520938 Rat 1594422 Cdk2ap1-ps2 Cdk2ap1-ps2 pseudogene 20 3533509 3534644 Rat 1598235 RT1-CE2 RT1 class I, locus CE2 20 3538452 3541841 Rat 70923 Ddx39b DExD-box helicase 39B 20 3547702 3585064 Rat 1594423 Vps52-ps3 VPS52 subunit of GARP complex, pseudogene 3 20 3548481 3548940 Rat 1595869 RT1-CE1 RT1 class I, locus1 20 3555779 3559487 Rat 41374192 Snord83 Small nucleolar RNA SNORD83 20 3578766 3578840 Rat 41079206 LOC120099056 small nucleolar RNA SNORD83 20 3583971 3584049 Rat 1303186 Atp6v1g2 ATPase H+ transporting V1 subunit G2 20 3587681 3591309 Rat 1303310 Nfkbil1 NFKB inhibitor like 1 20 3589974 3608348 Rat 3020 Lta lymphotoxin alpha 20 3618853 3621324 Rat 3876 Tnf tumor necrosis factor 20 3622011 3624629 Rat 1303162 Ltb lymphotoxin beta 20 3627536 3629381 Rat 620077 Lst1 leukocyte specific transcript 1 20 3634680 3639731 Rat 727881 Ncr3 natural cytotoxicity triggering receptor 3 20 3637242 3643748 Rat 61924 Aif1 allograft inflammatory factor 1 20 3646784 3652670 Rat 1303199 E230034O05Rik E230034O05Rik gene 20 3656306 3658463 Rat 1303025 Prrc2a proline-rich coiled-coil 2A 20 3658391 3674143 Rat 41318103 Snora38 small nucleolar RNA, H/ACA box 38 20 3660900 3661033 Rat 71064 Bag6 BAG cochaperone 6 20 3675938 3690414 Rat 620773 Apom apolipoprotein M 20 3690950 3693550 Rat 1303038 G4 G4 protein 20 3693691 3696194 Rat 1303304 Gpank1 G patch domain and ankyrin repeats 1 20 3697641 3700814 Rat 619978 Csnk2b casein kinase 2 beta 20 3700363 3705331 Rat 1303101 Ly6g5b lymphocyte antigen 6 family member G5B 20 3705464 3707830 Rat 735180 Ly6g5c lymphocyte antigen 6 family member G5C 20 3709426 3713940 Rat 1303164 Abhd16a abhydrolase domain containing 16A, phospholipase 20 3719089 3733952 Rat 1594424 Rps25-ps2 ribosomal protein S25, pseudogene 2 20 3735347 3735801 Rat 1303333 Ly6g6f lymphocyte antigen 6 family member G6F 20 3737459 3742327 Rat 1303064 Ly6g6d lymphocyte antigen 6 family member G6D 20 3741973 3752378 Rat 1303112 Ly6g6e lymphocyte antigen 6 family member G6E 20 3744999 3749867 Rat 1302999 Ly6g6c lymphocyte antigen 6 family member G6C 20 3753632 3757205 Rat 1303269 Mpig6b megakaryocyte and platelet inhibitory receptor G6b 20 3757396 3761024 Rat 1302955 Ddah2 DDAH family member 2, ADMA-independent 20 3761460 3764718 Rat 1303043 Clic1 chloride intracellular channel 1 20 3764867 3773711 Rat 1303008 Msh5 mutS homolog 5 20 3773867 3793337 Rat 41396061 LOC120099048 U6 spliceosomal RNA 20 3774572 3774677 Rat 1359359 Sapcd1 suppressor APC domain containing 1 20 3793980 3795767 Rat 1303137 Vwa7 von Willebrand factor A domain containing 7 20 3794991 3805646 Rat 3950 Vars1 valyl-tRNA synthetase 1 20 3805774 3820468 Rat 11436027 LOC108349032 uncharacterized LOC108349032 20 3820673 3830868 Rat 1590214 Rpl13-ps1 ribosomal protein L13, pseudogene 1 20 3839460 3839702 Rat 1598536 Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated 20 3843467 3847217 Rat 1595925 Hspa1l heat shock protein family A (Hsp70) member 1 like 20 3848843 3855571 Rat 2840 Hspa1b heat shock protein family A (Hsp70) member 1B 20 3855104 3859148 Rat 1593284 Hspa1a heat shock protein family A (Hsp70) member 1A 20 3870765 3873221 Rat 7707260 LOC102549726 uncharacterized LOC102549726 20 3876563 3879281 Rat 41104675 Snord48 small nucleolar RNA, C/D box 48 20 3877283 3877346 Rat 41062511 Snord52 small nucleolar RNA, C/D box 52 20 3878412 3878477 Rat 3163 Neu1 neuraminidase 1 20 3897480 3901745 Rat 41072487 LOC120098979 uncharacterized LOC120098979 20 3900976 3906605 Rat 1303167 Slc44a4 solute carrier family 44, member 4 20 3903099 3919215 Rat 1302972 Ehmt2 euchromatic histone lysine methyltransferase 2 20 3919623 3936751 Rat 1302958 Zbtb12 zinc finger and BTB domain containing 12 20 3937668 3940514 Rat 7661101 LOC102553878 uncharacterized LOC102553878 20 3939826 3944890 Rat 2231 C2 complement C2 20 3951474 3970376 Rat 2204 Cfb complement factor B 20 3970643 3976510 Rat 1303325 Nelfe negative elongation factor complex member E 20 3976512 3982389 Rat 1303059 Skic2 SKI2 subunit of superkiller complex 20 3982494 3993261 Rat 1303267 Dxo decapping exoribonuclease 20 3993322 3995484 Rat 1359601 Stk19 serine/threonine kinase 19 20 3995590 4005117 Rat 620005 C4a complement C4A 20 4005731 4020083 Rat 2461 Cyp21a1 cytochrome P450, family 21, subfamily a, polypeptide 1 20 4020217 4026923 Rat 3887 Tnxa-ps1 tenascin XA, pseudogene 1 20 4026471 4027826 Rat 40991350 LOC120098978 uncharacterized LOC120098978 20 4084612 4087472 Rat 1303317 Atf6b activating transcription factor 6 beta 20 4090921 4098920 Rat 1303227 Fkbpl FKBP prolyl isomerase like 20 4099845 4101315 Rat 620375 Ppt2 palmitoyl-protein thioesterase 2 20 4112520 4132774 Rat 1359348 Prrt1 proline-rich transmembrane protein 1 20 4117957 4121643 Rat 1549706 Egfl8 EGF-like-domain, multiple 8 20 4132930 4136024 Rat 1303287 Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 20 4135955 4144880 Rat 1588458 Rnf5 ring finger protein 5 20 4145539 4147985 Rat 69258 Ager advanced glycosylation end product-specific receptor 20 4148150 4151361 Rat 1303084 Pbx2 PBX homeobox 2 20 4151500 4156425 Rat 1303014 Gpsm3 G-protein signaling modulator 3 20 4157123 4158984 Rat 1303282 Notch4 notch receptor 4 20 4160362 4184466 Rat 1588459 Stk19-ps serine/threonine kinase 19 pseudogene 20 4194171 4196677 Rat 1591983 C4b complement C4B 20 4197371 4211684 Rat 1303332 Cyp21a1-ps cytochrome P450, family 21, subfamily a, polypeptide 1, pseudogene 20 4215637 4231737 Rat 1624210 Btnl4 butyrophilin-like 4 20 4231350 4244825 Rat 1303010 Btnl8 butyrophilin-like 8 20 4264840 4280876 Rat 1303124 Btnl7 butyrophilin-like 7 20 4301078 4313522 Rat 1588460 Btnl6-ps1 butyrophilin-like 6, pseudogene 1 20 4336902 4344877 Rat 1598537 Btnl5 butyrophilin-like 5 20 4366780 4376385 Rat 1598538 Btn3a2 butyrophilin, subfamily 3, member A2 20 4398254 4405681 Rat 1597063 Tsbp1 testis expressed basic protein 1 20 4410002 4467284 Rat 1303262 Btnl3 butyrophilin-like 3 20 4474056 4489024 Rat 11477629 LOC108349035 uncharacterized LOC108349035 20 4475827 4479937 Rat 620731 Btnl2 butyrophilin-like 2 20 4490169 4504002 Rat 1593283 RT1-Da RT1 class II, locus Da 20 4513464 4518457 Rat 1595922 RT1-Db2 RT1 class II, locus Db2 20 4520723 4539724 Rat 1303212 Arrb2-ps arrestin, beta 2, pseudogene 20 4523897 4524874 Rat 1593282 RT1-Db1 RT1 class II, locus Db1 20 4548664 4558237 Rat 1595867 RT1-Ba RT1 class II, locus Ba 20 4575134 4579727 Rat 3469 RT1-Bb RT1 class II, locus Bb 20 4596558 4602201 Rat
QTLs in Region (mRatBN7.2)
2306850 Pia40 Pristane induced arthritis QTL 40 0.0001 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 20 1527959 5304575 Rat 1354642 Despr15 Despair related QTL 15 0.0027 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 20 1 24159021 Rat 61448 Ciaa1 CIA Autoantibody QTL 1 30 0.001 blood autoantibody amount (VT:0003725) calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281) 20 2646395 4597031 Rat 9590109 Sffal8 Serum free fatty acids level QTL 8 5.32 0.01 blood free fatty acid amount (VT:0001553) plasma free fatty acids level (CMO:0000546) 20 1 29191651 Rat 9590275 Scort15 Serum corticosterone level QTL 15 3.48 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 20 1 29191651 Rat 7175099 Tcs2 T cell selection QTL 2 T cell selection trait (VT:0004917) expression 20 4504002 4693102 Rat 6893685 Bw111 Body weight QTL 111 2.7 0.004 body mass (VT:0001259) body weight (CMO:0000012) 20 1 32578807 Rat 61472 Aia1 Adjuvant induced arthritis QTL 1 18 0.001 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 20 2646395 4597031 Rat 1641915 Colcr9 Colorectal carcinoma resistance QTL 9 2.97 0.0024 intestine integrity trait (VT:0010554) benign colorectal tumor number (CMO:0001795) 20 1530655 46530655 Rat 2317057 Aia27 Adjuvant induced arthritis QTL 27 2.83 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 20 2892597 26381954 Rat 7387283 Uae44 Urinary albumin excretion QTL 44 0.1712 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 20 1 26123605 Rat 2305926 Iddm37 Insulin dependent diabetes mellitus QTL 37 6 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) 20 1527842 46527842 Rat 7411668 Foco32 Food consumption QTL 32 8 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 20 1 36600972 Rat 1600382 Edcs3 Endometrial carcinoma susceptibility QTL3 3.5 0.003 uterus morphology trait (VT:0001120) percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759) 20 1 25159026 Rat 1331772 Cdexp2 CD45RC expression in CD8 T cells QTL 2 5.7 CD8-positive T cell quantity (VT:0008077) blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990) 20 3621649 10078919 Rat 8694189 Bw153 Body weight QTL 153 3.13 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 20 1 29191651 Rat 1300152 Bp195 Blood pressure QTL 195 3.46 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 20 3621649 9243559 Rat 724519 Bp144 Blood pressure QTL 144 0.001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 20 1 3624629 Rat 9589155 Insul32 Insulin level QTL 32 6.38 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 20 1 29191651 Rat 7411650 Foco23 Food consumption QTL 23 20.7 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 20 1 29191651 Rat 61432 Cia1 Collagen induced arthritis QTL 1 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 20 3621656 14101050 Rat 1598816 Memor12 Memory QTL 12 2.4 exploratory behavior trait (VT:0010471) average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674) 20 2606836 47606836 Rat 2317851 Alcrsp22 Alcohol response QTL 22 3.2 0.05 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 20 1 27339237 Rat 1641893 Alcrsp7 Alcohol response QTL 7 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 20 1 27339237 Rat 737973 Pia21 Pristane induced arthritis QTL 21 4.8 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 20 3621656 4606812 Rat 9590252 Scort12 Serum corticosterone level QTL 12 20.46 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 20 1 36600972 Rat