Emp3 (epithelial membrane protein 3) - Rat Genome Database

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Gene: Emp3 (epithelial membrane protein 3) Rattus norvegicus
Analyze
Symbol: Emp3
Name: epithelial membrane protein 3
RGD ID: 621094
Description: Predicted to be involved in apoptotic process and bleb assembly. Predicted to be active in plasma membrane. Orthologous to human EMP3 (epithelial membrane protein 3 (MAM blood group)); INTERACTS WITH 1,2,4-trimethylbenzene; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: EMP-3; MGC108667
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,525,086 - 105,528,370 (-)NCBIGRCr8
mRatBN7.2196,388,651 - 96,391,946 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,388,652 - 96,391,988 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1101,774,797 - 101,777,974 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01110,246,785 - 110,249,962 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,537,150 - 103,540,327 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01101,900,731 - 101,903,948 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,900,733 - 101,903,910 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,979,695 - 102,982,874 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,389,783 - 96,392,960 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1196,467,893 - 96,471,071 (-)NCBI
Celera190,641,302 - 90,644,479 (-)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Emp3RatProstatic Neoplasms  ISOEMP3 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15583422

1 to 20 of 117 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Emp3Rat1,1-dichloroethene increases expressionISOEmp3 (Mus musculus)6480464vinylidene chloride results in increased expression of EMP3 mRNACTDPMID:26682919
Emp3Rat1,2,4-trimethylbenzene decreases expressionEXP 6480464pseudocumene results in decreased expression of EMP3 proteinCTDPMID:17337753
Emp3Rat1,2-dimethylhydrazine increases expressionISOEmp3 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of EMP3 mRNACTDPMID:22206623
Emp3Rat17alpha-ethynylestradiol increases expressionISOEmp3 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of EMP3 mRNACTDPMID:17942748
Emp3Rat17alpha-ethynylestradiol decreases expressionEXP 6480464Ethinyl Estradiol results in decreased expression of EMP3 mRNACTDPMID:17557909
Emp3Rat17alpha-ethynylestradiol multiple interactionsISOEmp3 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of EMP3 mRNACTDPMID:17942748
Emp3Rat17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of EMP3 mRNACTDPMID:32145629
Emp3Rat17beta-estradiol decreases expressionISOEMP3 (Homo sapiens)6480464Estradiol results in decreased expression of EMP3 mRNACTDPMID:31614463
Emp3Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOEmp3 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of EMP3 mRNACTDPMID:17337447
Emp3Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of EMP3 mRNACTDPMID:34747641
Emp3Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOEmp3 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of EMP3 mRNACTDPMID:21570461
Emp3Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOEMP3 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of EMP3 mRNACTDPMID:20106945 and PMID:21632981
Emp3Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOEMP3 (Homo sapiens)6480464Tetrachlorodibenzodioxin affects the expression of EMP3 mRNACTDPMID:22298810
Emp3Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOEmp3 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of EMP3 mRNACTDPMID:17942748
Emp3Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOEmp3 (Mus musculus)64804642 more ...CTDPMID:38648751
Emp3Rat4,4'-sulfonyldiphenol increases expressionISOEmp3 (Mus musculus)6480464bisphenol S results in increased expression of EMP3 mRNACTDPMID:30951980 and PMID:39298647
Emp3Rat4,4'-sulfonyldiphenol increases methylationISOEmp3 (Mus musculus)6480464bisphenol S results in increased methylation of EMP3 exonCTDPMID:33297965
Emp3Rat4-hydroxyphenyl retinamide decreases expressionISOEmp3 (Mus musculus)6480464Fenretinide results in decreased expression of EMP3 mRNACTDPMID:28973697
Emp3Rat5-aza-2'-deoxycytidine affects expressionISOEMP3 (Homo sapiens)6480464Decitabine affects the expression of EMP3 mRNACTDPMID:23300844
Emp3Rat5-fluorouracil increases expressionISOEmp3 (Mus musculus)6480464Fluorouracil results in increased expression of EMP3 mRNACTDPMID:19272435

1 to 20 of 117 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Emp3Ratapoptotic process involved_inIEAUniProtKB:P54852 and ensembl:ENSP000002702211600115GO_REF:0000107EnsemblGO_REF:0000107
Emp3Ratapoptotic process involved_inISOEMP3 (Homo sapiens)1624291 PMID:12107182RGDPMID:12107182
Emp3Ratbleb assembly involved_inIEAUniProtKB:P54852 and ensembl:ENSP000002702211600115GO_REF:0000107EnsemblGO_REF:0000107
Emp3Ratbleb assembly involved_inISOEMP3 (Homo sapiens)1624291 PMID:12107182RGDPMID:12107182

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Emp3Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Emp3Ratmembrane located_inIEAInterPro:IPR003934 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Emp3Ratmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
Emp3Ratplasma membrane located_inISOEMP3 (Homo sapiens)1624291 PMID:12107182RGDPMID:12107182
Emp3Ratplasma membrane is_active_inIBAMGI:1098726 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Emp3Ratplasma membrane located_inIEAUniProtKB:P54852 and ensembl:ENSP000002702211600115GO_REF:0000107EnsemblGO_REF:0000107

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Emp3Ratprotein binding enablesISOEMP3 (Homo sapiens)1624291UniProtKB:A1L3X0 more ...RGDPMID:12107182 more ...


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Genetic dissection of dome formation in a mammary cell line: identification of two genes with opposing action. Zucchi I, etal., Proc Natl Acad Sci U S A 1999 Nov 23;96(24):13766-70.
PMID:12107182   PMID:12477932   PMID:15489334  



Emp3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,525,086 - 105,528,370 (-)NCBIGRCr8
mRatBN7.2196,388,651 - 96,391,946 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,388,652 - 96,391,988 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1101,774,797 - 101,777,974 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01110,246,785 - 110,249,962 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,537,150 - 103,540,327 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01101,900,731 - 101,903,948 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,900,733 - 101,903,910 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,979,695 - 102,982,874 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,389,783 - 96,392,960 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1196,467,893 - 96,471,071 (-)NCBI
Celera190,641,302 - 90,644,479 (-)NCBICelera
Cytogenetic Map1q22NCBI
EMP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381948,325,552 - 48,330,553 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1948,321,310 - 48,330,559 (+)EnsemblGRCh38hg38GRCh38
GRCh371948,828,809 - 48,833,810 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361953,520,454 - 53,525,622 (+)NCBINCBI36Build 36hg18NCBI36
Build 341953,520,453 - 53,525,622NCBI
Celera1945,693,863 - 45,699,044 (+)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1945,209,377 - 45,214,558 (+)NCBIHuRef
CHM1_11948,830,732 - 48,835,916 (+)NCBICHM1_1
T2T-CHM13v2.01951,319,698 - 51,324,699 (+)NCBIT2T-CHM13v2.0
Emp3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,567,447 - 45,570,850 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,567,447 - 45,570,828 (-)EnsemblGRCm39 Ensembl
GRCm38745,918,023 - 45,921,426 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,918,023 - 45,921,404 (-)EnsemblGRCm38mm10GRCm38
MGSCv37753,173,393 - 53,176,796 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36745,786,106 - 45,789,446 (-)NCBIMGSCv36mm8
Celera741,383,035 - 41,386,440 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.6NCBI
Emp3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555592,117,200 - 2,121,366 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555592,117,200 - 2,121,366 (-)NCBIChiLan1.0ChiLan1.0
EMP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22054,429,929 - 54,435,117 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11956,356,040 - 56,361,407 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01945,326,302 - 45,331,462 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11953,919,933 - 53,925,147 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1953,919,986 - 53,925,147 (+)Ensemblpanpan1.1panPan2
EMP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,901,778 - 107,905,912 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,901,781 - 107,905,619 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,423,282 - 107,427,399 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01108,426,213 - 108,430,346 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1108,426,216 - 108,430,232 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11108,092,642 - 108,096,761 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01107,739,405 - 107,743,526 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,575,501 - 108,579,626 (-)NCBIUU_Cfam_GSD_1.0
Emp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934920,850,007 - 20,853,482 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366642,468,269 - 2,471,675 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366642,467,240 - 2,471,672 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EMP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl653,757,776 - 53,761,833 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1653,757,513 - 53,761,833 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,394,027 - 49,398,349 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EMP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1641,591,145 - 41,596,723 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl641,591,020 - 41,596,951 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607321,368,887 - 21,374,758 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Emp3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248325,432,166 - 5,436,337 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248325,432,204 - 5,437,514 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Emp3
9 total Variants

Predicted Target Of
Summary Value
Count of predictions:58
Count of miRNA genes:54
Interacting mature miRNAs:55
Transcripts:ENSRNOT00000028656
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 45 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)178479925123479925Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194494440172949803Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
2300324Fetw1Fetal weight QTL 112.10.005fetal growth trait (VT:0004201)fetal body weight (CMO:0002080)185424647100358001Rat

1 to 10 of 45 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000028656   ⟹   ENSRNOP00000028656
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl196,388,652 - 96,391,988 (-)Ensembl
Rnor_6.0 Ensembl1101,900,733 - 101,903,910 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000106496   ⟹   ENSRNOP00000095309
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl196,388,652 - 96,391,750 (-)Ensembl
RefSeq Acc Id: NM_030847   ⟹   NP_110474
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81105,525,088 - 105,528,265 (-)NCBI
mRatBN7.2196,388,654 - 96,391,831 (-)NCBI
Rnor_6.01101,900,733 - 101,903,910 (-)NCBI
Rnor_5.01102,979,695 - 102,982,874 (-)NCBI
RGSC_v3.4196,389,783 - 96,392,960 (-)RGD
Celera190,641,302 - 90,644,479 (-)RGD
Sequence:
RefSeq Acc Id: XM_006229158   ⟹   XP_006229220
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81105,525,086 - 105,528,216 (-)NCBI
mRatBN7.2196,388,652 - 96,391,792 (-)NCBI
Rnor_6.01101,900,731 - 101,903,855 (-)NCBI
Rnor_5.01102,979,695 - 102,982,874 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008759418   ⟹   XP_008757640
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81105,525,086 - 105,528,370 (-)NCBI
mRatBN7.2196,388,652 - 96,391,946 (-)NCBI
Rnor_6.01101,900,731 - 101,903,948 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039091912   ⟹   XP_038947840
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81105,525,086 - 105,528,068 (-)NCBI
mRatBN7.2196,388,652 - 96,391,663 (-)NCBI
1 to 11 of 11 rows
Protein RefSeqs NP_110474 (Get FASTA)   NCBI Sequence Viewer  
  XP_006229220 (Get FASTA)   NCBI Sequence Viewer  
  XP_008757640 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947840 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH88131 (Get FASTA)   NCBI Sequence Viewer  
  CAB61834 (Get FASTA)   NCBI Sequence Viewer  
  EDM07283 (Get FASTA)   NCBI Sequence Viewer  
  EDM07284 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000028656
  ENSRNOP00000028656.2
GenBank Protein Q9QYW5 (Get FASTA)   NCBI Sequence Viewer  
1 to 11 of 11 rows
RefSeq Acc Id: NP_110474   ⟸   NM_030847
- UniProtKB: Q9QYW5 (UniProtKB/Swiss-Prot),   A6JBA1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006229220   ⟸   XM_006229158
- Peptide Label: isoform X1
- UniProtKB: Q9QYW5 (UniProtKB/Swiss-Prot),   A6JBA1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008757640   ⟸   XM_008759418
- Peptide Label: isoform X1
- UniProtKB: Q9QYW5 (UniProtKB/Swiss-Prot),   A6JBA1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000028656   ⟸   ENSRNOT00000028656
RefSeq Acc Id: XP_038947840   ⟸   XM_039091912
- Peptide Label: isoform X1
- UniProtKB: Q9QYW5 (UniProtKB/Swiss-Prot),   A6JBA1 (UniProtKB/TrEMBL)

Name Modeler Protein Id AA Range Protein Structure
AF-Q9QYW5-F1-model_v2 AlphaFold Q9QYW5 1-163 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13690057
Promoter ID:EPDNEW_R582
Type:multiple initiation site
Name:Emp3_1
Description:epithelial membrane protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01101,903,913 - 101,903,973EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-59639 BioCyc
Ensembl Genes ENSRNOG00000021104 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000028656 ENTREZGENE
  ENSRNOT00000028656.5 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.140.150 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7365466 IMAGE-MGC_LOAD
InterPro EMP_3 UniProtKB/Swiss-Prot
  PMP-22/EMP/MP20 UniProtKB/Swiss-Prot
  PMP22/EMP/MP20/Claudin UniProtKB/Swiss-Prot
  PMP22_EMP_MP20 UniProtKB/Swiss-Prot
KEGG Report rno:81505 UniProtKB/Swiss-Prot
MGC_CLONE MGC:108667 IMAGE-MGC_LOAD
NCBI Gene 81505 ENTREZGENE
PANTHER EPITHELIAL MEMBRANE PROTEIN-RELATED UniProtKB/Swiss-Prot
  PTHR10671:SF8 UniProtKB/Swiss-Prot
Pfam PMP22_Claudin UniProtKB/Swiss-Prot
PhenoGen Emp3 PhenoGen
PRINTS EPMEMFAMILY UniProtKB/Swiss-Prot
  EPMEMPROT3 UniProtKB/Swiss-Prot
PROSITE PMP22_1 UniProtKB/Swiss-Prot
  PMP22_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000021104 RatGTEx
UniProt A0A8I6AMU1_RAT UniProtKB/TrEMBL
  A6JBA1 ENTREZGENE, UniProtKB/TrEMBL
  EMP3_RAT UniProtKB/Swiss-Prot, ENTREZGENE
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Emp3  epithelial membrane protein 3      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Emp3  epithelial membrane protein 3      Symbol and Name status set to provisional 70820 PROVISIONAL