Adgrl3 (adhesion G protein-coupled receptor L3) - Rat Genome Database

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Gene: Adgrl3 (adhesion G protein-coupled receptor L3) Rattus norvegicus
Analyze
Symbol: Adgrl3
Name: adhesion G protein-coupled receptor L3
RGD ID: 620836
Description: Predicted to enable G protein-coupled receptor activity and calcium ion binding activity. Predicted to be involved in several processes, including locomotion involved in locomotory behavior; response to cocaine; and synapse organization. Predicted to act upstream of or within positive regulation of synapse assembly. Predicted to be located in membrane. Predicted to be active in several cellular components, including Schaffer collateral - CA1 synapse; glutamatergic synapse; and postsynaptic membrane. Orthologous to human ADGRL3 (adhesion G protein-coupled receptor L3); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: calcium-independent alpha-latrotoxin receptor 3; calcium-independent alpha-latrotoxin receptor homolog 3; CIRL-3; Cirl3; latrophilin 3; latrophilin-3; Lec3; lectomedin-3; Lphn3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: Adgrl3Tn(sb-T2/Bart3)2.151Mcwi ; Adgrl3em1Huyc
Genetic Models: F344-Adgrl3Tn(sb-T2/Bart3)2.151Mcwi ; SD-Adgrl3em1Huyc
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81426,690,891 - 27,458,132 (-)NCBIGRCr8
mRatBN7.21426,336,320 - 27,104,060 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1426,368,277 - 27,105,860 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1426,715,441 - 27,465,812 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01428,027,851 - 28,778,270 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01426,509,623 - 27,260,039 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01428,362,176 - 29,226,085 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1428,393,394 - 28,967,980 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01428,183,727 - 29,040,121 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41428,385,112 - 28,854,677 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11428,385,120 - 28,854,677 (-)NCBI
Celera1425,731,451 - 26,185,004 (-)NCBICelera
Cytogenetic Map14p21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
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Adgrl3RatReperfusion Injury  IEP 2314400 RGD 
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Adgrl3RatNeurodevelopmental Disorders  ISORGD:13533518554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
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Adgrl3Ratattention deficit hyperactivity disorder  ISORGD:135335111554173CTD Direct Evidence: marker/mechanismCTDPMID:22405201
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Adgrl3Ratattention deficit hyperactivity disorder  ISSRGD:155324713592920OMIM:143465 | OMIM:608903 | OMIM:608904 | OMIM:608905 | OMIM:608906 | OMIM:612311 | OMIM:612312MouseDO 

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Adgrl3Rat17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of ADGRL3 mRNACTDPMID:15901920
Adgrl3Rat17alpha-ethynylestradiol affects expressionEXP 6480464Ethinyl Estradiol affects the expression of ADGRL3 mRNACTDPMID:26865667
Adgrl3Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:15532476480464Tetrachlorodibenzodioxin results in decreased expression of ADGRL3 mRNACTDPMID:19465110
Adgrl3Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ADGRL3 mRNACTDPMID:32109520
Adgrl3Rat2,3,7,8-Tetrachlorodibenzofuran decreases expressionEXP 64804642,3,7,8-tetrachlorodibenzofuran results in decreased expression of ADGRL3 mRNACTDPMID:32109520
Adgrl3Rat3,4-methylenedioxymethamphetamine increases expressionISORGD:15532476480464N-Methyl-3,4-methylenedioxyamphetamine results in increased expression of ADGRL3 mRNACTDPMID:20188158
Adgrl3Rat4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ...CTDPMID:36041667
Adgrl3Rat6-propyl-2-thiouracil affects expressionEXP 6480464Propylthiouracil affects the expression of ADGRL3 mRNACTDPMID:24780913
Adgrl3Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of LPHN3 mRNACTDPMID:30047161
Adgrl3Rataflatoxin B1 increases methylationISORGD:13533516480464Aflatoxin B1 results in increased methylation of ADGRL3 intronCTDPMID:30157460
Adgrl3Ratalpha-Zearalanol multiple interactionsEXP 6480464[Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of ADGRL3 mRNACTDPMID:35163327
Adgrl3Ratamitrole decreases expressionEXP 6480464Amitrole results in decreased expression of ADGRL3 mRNA; Amitrole results in decreased expression of LPHN3 more ...CTDPMID:30047161|PMID:38685447
Adgrl3Ratammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of ADGRL3 mRNACTDPMID:16483693
Adgrl3Ratantirheumatic drug increases expressionISORGD:13533516480464Antirheumatic Agents results in increased expression of ADGRL3 mRNACTDPMID:24449571
Adgrl3Rataristolochic acid A decreases expressionISORGD:13533516480464aristolochic acid I results in decreased expression of ADGRL3 mRNACTDPMID:33212167
Adgrl3Ratarsane decreases expressionISORGD:15532476480464Arsenic results in decreased expression of ADGRL3 mRNACTDPMID:19654921
Adgrl3Ratarsenic atom decreases expressionISORGD:15532476480464Arsenic results in decreased expression of ADGRL3 mRNACTDPMID:19654921
Adgrl3Ratbelinostat decreases expressionISORGD:13533516480464belinostat results in decreased expression of ADGRL3 mRNACTDPMID:26272509
Adgrl3Ratbelinostat multiple interactionsISORGD:13533516480464[NOG protein co-treated with belinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression more ...CTDPMID:27188386
Adgrl3Ratbenzo[a]pyrene decreases expressionISORGD:15532476480464Benzo(a)pyrene results in decreased expression of ADGRL3 mRNACTDPMID:21569818

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Biological Process
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Adgrl3Ratadenylate cyclase-activating G protein-coupled receptor signaling pathway involved_inIBAMGI:1916151|PANTHER:PTN000244280|UniProtKB:Q6QNK21600115GO_REF:0000033GO_CentralGO_REF:0000033
Adgrl3Ratcell surface receptor signaling pathway involved_inIEAInterPro:IPR0179811600115GO_REF:0000002InterProGO_REF:0000002
Adgrl3Ratcell-cell adhesion via plasma-membrane adhesion molecules involved_inISORGD:13533511624291 PMID:26235030RGDPMID:26235030
Adgrl3Ratcell-cell adhesion via plasma-membrane adhesion molecules involved_inIBAMGI:2441950|PANTHER:PTN008532405|UniProtKB:Q9HAR21600115GO_REF:0000033GO_CentralGO_REF:0000033
Adgrl3Ratcell-cell adhesion via plasma-membrane adhesion molecules involved_inISSUniProtKB:Q80TS31600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3Ratcell-cell adhesion via plasma-membrane adhesion molecules involved_inISORGD:15532471624291 PMID:22405201, PMID:25728924RGDPMID:22405201|PMID:25728924
Adgrl3Ratexcitatory synapse assembly involved_inISSUniProtKB:Q80TS31600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3RatG protein-coupled receptor signaling pathway involved_inIEAUniProtKB-KW:KW-02971600115GO_REF:0000043UniProtGO_REF:0000043
Adgrl3RatG protein-coupled receptor signaling pathway involved_inIEAInterPro:IPR000832|InterPro:IPR003334|InterPro:IPR0179831600115GO_REF:0000002InterProGO_REF:0000002
Adgrl3Ratlocomotion involved in locomotory behavior involved_inISORGD:15532471624291 PMID:22575564RGDPMID:22575564
Adgrl3Ratmaintenance of postsynaptic specialization structure involved_inISORGD:15532471624291 PMID:30792275RGDPMID:30792275
Adgrl3Ratneuron migration involved_inISSUniProtKB:Q80TS31600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3Ratneuron migration involved_inISORGD:15532471624291 PMID:25728924RGDPMID:25728924
Adgrl3Ratpositive regulation of synapse assembly acts_upstream_of_or_withinISORGD:15532471624291 PMID:24613359RGDPMID:24613359
Adgrl3Ratresponse to cocaine involved_inISORGD:15532471624291 PMID:22575564RGDPMID:22575564
Adgrl3RatRho-activating G protein-coupled receptor signaling pathway involved_inISSUniProtKB:Q9HAR21600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3RatRho-activating G protein-coupled receptor signaling pathway involved_inISORGD:13533511624291 PMID:35418682RGDPMID:35418682
Adgrl3Ratsignal transduction involved_inIEAUniProtKB-KW:KW-08071600115GO_REF:0000043UniProtGO_REF:0000043
Adgrl3Ratsynapse assembly involved_inISSUniProtKB:Q80TS31600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3Ratsynapse assembly involved_inIBAMGI:2441950|PANTHER:PTN0085324051600115GO_REF:0000033GO_CentralGO_REF:0000033
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Cellular Component
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Adgrl3Ratanchoring junction located_inIEAUniProtKB-KW:KW-09651600115GO_REF:0000043UniProtGO_REF:0000043
Adgrl3Ratanchoring junction located_inIEAUniProtKB-SubCell:SL-00381600115GO_REF:0000044UniProtGO_REF:0000044
Adgrl3Rataxon located_inISORGD:15532471624291 PMID:22405201RGDPMID:22405201
Adgrl3Rataxon is_active_inIBAMGI:2441950|PANTHER:PTN0085324051600115GO_REF:0000033GO_CentralGO_REF:0000033
Adgrl3Rataxon located_inIEAUniProtKB-SubCell:SL-02791600115GO_REF:0000044UniProtGO_REF:0000044
Adgrl3Rataxon located_inISSUniProtKB:Q80TS31600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3Ratcell projection located_inIEAUniProtKB-KW:KW-09661600115GO_REF:0000043UniProtGO_REF:0000043
Adgrl3Ratcell-cell junction located_inISSUniProtKB:Q80TS31600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3Ratcell-cell junction located_inISORGD:15532471624291 PMID:22405201RGDPMID:22405201
Adgrl3Ratcell-cell junction is_active_inIBAMGI:2441950|PANTHER:PTN0085324051600115GO_REF:0000033GO_CentralGO_REF:0000033
Adgrl3Ratglutamatergic synapse is_active_inIBAMGI:2441950|PANTHER:PTN0085324051600115GO_REF:0000033GO_CentralGO_REF:0000033
Adgrl3Ratglutamatergic synapse is_active_inISORGD:15532471624291 PMID:24739570, PMID:30792275RGDPMID:24739570|PMID:30792275
Adgrl3Ratmembrane located_inIEAInterPro:IPR000832|InterPro:IPR001879|InterPro:IPR003334|InterPro:IPR003924|InterPro:IPR017981|InterPro:IPR0364451600115GO_REF:0000002InterProGO_REF:0000002
Adgrl3Ratmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
Adgrl3Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Adgrl3Ratplasma membrane is_active_inIBAFB:FBgn0033313|FB:FBgn0039818|FB:FBgn0039821|MGI:106912|MGI:1347095|MGI:1933736|MGI:2139714|MGI:2441837|MGI:2441950|PANTHER:PTN002279899|RGD:1305608|RGD:620768|RGD:621136|RGD:628618|UniProtKB:O14514|UniProtKB:O60241|UniProtKB:O60242|UniProtKB:Q6QNK2|UniProtKB:Q86SQ4|UniProtKB:Q86Y34|UniProtKB:Q8IZP9|UniProtKB:Q9HAR2|UniProtKB:Q9UHX3|WB:WBGene000022511600115GO_REF:0000033GO_CentralGO_REF:0000033
Adgrl3Ratplasma membrane located_inIEAUniProtKB-SubCell:SL-00391600115GO_REF:0000044UniProtGO_REF:0000044
Adgrl3Ratplasma membrane located_inISORGD:15532471624291 PMID:22405201RGDPMID:22405201
Adgrl3Ratplasma membrane located_inISORGD:13533511624291 PMID:26235030RGDPMID:26235030
Adgrl3Ratplasma membrane located_inISSUniProtKB:Q80TS31600115GO_REF:0000024UniProtGO_REF:0000024
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Molecular Function
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Adgrl3Ratcalcium ion binding enablesISSUniProtKB:Q80TS31600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3Ratcalcium ion binding enablesISORGD:15532471624291 PMID:26235031RGDPMID:26235031
Adgrl3Ratcalcium ion binding enablesISORGD:13533511624291 PMID:26235030RGDPMID:26235030
Adgrl3Ratcarbohydrate binding enablesIEAUniProtKB-KW:KW-04301600115GO_REF:0000043UniProtGO_REF:0000043
Adgrl3Ratcarbohydrate binding enablesIEAInterPro:IPR0009221600115GO_REF:0000002InterProGO_REF:0000002
Adgrl3Ratcell adhesion mediator activity enablesISSUniProtKB:Q80TS31600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3RatG protein-coupled receptor activity  TAS 632388 RGD 
Adgrl3RatG protein-coupled receptor activity enablesISSUniProtKB:Q9HAR21600115GO_REF:0000024UniProtGO_REF:0000024
Adgrl3RatG protein-coupled receptor activity enablesIBAMGI:1340051|PANTHER:PTN000244280|RGD:620768|UniProtKB:O14514|UniProtKB:O60241|UniProtKB:Q6QNK2|UniProtKB:Q86SQ4|ZFIN:ZDB-GENE-041014-3571600115GO_REF:0000033GO_CentralGO_REF:0000033
Adgrl3RatG protein-coupled receptor activity enablesIEAInterPro:IPR000832|InterPro:IPR001879|InterPro:IPR003334|InterPro:IPR003924|InterPro:IPR017983|InterPro:IPR0364451600115GO_REF:0000002InterProGO_REF:0000002
Adgrl3RatG protein-coupled receptor activity enablesISORGD:13533511624291 PMID:35418682RGDPMID:35418682
Adgrl3RatG protein-coupled receptor activity enablesIEAUniProtKB-KW:KW-02971600115GO_REF:0000043UniProtGO_REF:0000043
Adgrl3Ratmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
Adgrl3Ratprotein binding enablesISORGD:13533511624291UniProtKB:Q9NZU0 PMID:26235030RGDPMID:26235030
Adgrl3Ratprotein binding enablesISORGD:15532471624291PR:Q9WTS6|UniProtKB:Q8BGT1|UniProtKB:Q8BLU0 PMID:25728924, PMID:26235031, PMID:29414938RGDPMID:25728924|PMID:26235031|PMID:29414938
Adgrl3Rattransmembrane signaling receptor activity enablesIEAInterPro:IPR0179811600115GO_REF:0000002InterProGO_REF:0000002
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Adgrl3Ratenhanced behavioral response to amphetamine sexual_dimorphismIMP 127285660compared to wild type femaleRGD 
Adgrl3Rathyperactivity  IMP 127285660compared to wild typeRGD 
Adgrl3Ratincreased startle reflex  IMP 127285660compared to wild typeRGD 
Adgrl3Ratslow postnatal weight gain sexual_dimorphismIMP 127285660compared to wild type maleRGD 

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Reference Title
Reference Citation
1. Involvement of the calcium-independent receptor for alpha-latrotoxin in brain ischemia. Bin Sun H, etal., Brain Res Mol Brain Res. 2002 Aug 15;104(2):246-9.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. A novel ubiquitously expressed alpha-latrotoxin receptor is a member of the CIRL family of G-protein-coupled receptors. Ichtchenko K, etal., J Biol Chem 1999 Feb 26;274(9):5491-8.
4. The calcium-independent receptor for alpha-latrotoxin from human and rodent brains interacts with members of the ProSAP/SSTRIP/Shank family of multidomain proteins. Kreienkamp HJ, etal., J Biol Chem. 2000 Oct 20;275(42):32387-90.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. Knockout of latrophilin-3 in Sprague-Dawley rats causes hyperactivity, hyper-reactivity, under-response to amphetamine, and disrupted dopamine markers. Regan SL, etal., Neurobiol Dis. 2019 Oct;130:104494. doi: 10.1016/j.nbd.2019.104494. Epub 2019 Jun 6.
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
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PMID:9830014   PMID:22405201   PMID:22575564   PMID:24613359   PMID:24739570   PMID:25728924   PMID:25931508   PMID:26235030   PMID:26235031   PMID:32203648   PMID:34352385   PMID:35985692  



Adgrl3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81426,690,891 - 27,458,132 (-)NCBIGRCr8
mRatBN7.21426,336,320 - 27,104,060 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1426,368,277 - 27,105,860 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1426,715,441 - 27,465,812 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01428,027,851 - 28,778,270 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01426,509,623 - 27,260,039 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01428,362,176 - 29,226,085 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1428,393,394 - 28,967,980 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01428,183,727 - 29,040,121 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41428,385,112 - 28,854,677 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11428,385,120 - 28,854,677 (-)NCBI
Celera1425,731,451 - 26,185,004 (-)NCBICelera
Cytogenetic Map14p21NCBI
ADGRL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38461,200,326 - 62,078,335 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl461,200,326 - 62,078,335 (+)EnsemblGRCh38hg38GRCh38
GRCh37462,066,044 - 62,944,053 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36462,045,434 - 62,620,763 (+)NCBINCBI36Build 36hg18NCBI36
Build 34462,191,604 - 62,766,933NCBI
Celera459,821,669 - 60,396,265 (+)NCBICelera
Cytogenetic Map4q13.1NCBI
HuRef458,271,407 - 58,846,164 (+)NCBIHuRef
CHM1_1462,398,708 - 62,974,117 (+)NCBICHM1_1
T2T-CHM13v2.0464,638,264 - 65,515,643 (+)NCBIT2T-CHM13v2.0
Adgrl3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39581,167,600 - 81,980,556 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl581,167,985 - 81,972,980 (+)EnsemblGRCm39 Ensembl
GRCm38581,019,085 - 81,827,825 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl581,020,138 - 81,825,133 (+)EnsemblGRCm38mm10GRCm38
MGSCv37581,450,618 - 82,224,755 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36582,096,154 - 82,870,291 (+)NCBIMGSCv36mm8
Celera578,280,126 - 79,039,754 (+)NCBICelera
Cytogenetic Map5D- E1NCBI
cM Map542.62NCBI
Adgrl3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554479,943,598 - 10,709,008 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554479,912,679 - 10,708,743 (-)NCBIChiLan1.0ChiLan1.0
ADGRL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2367,717,238 - 68,578,490 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1467,937,970 - 68,799,235 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0461,876,694 - 62,742,354 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1468,315,996 - 69,183,881 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl468,323,404 - 69,003,093 (-)Ensemblpanpan1.1panPan2
ADGRL3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11352,742,043 - 53,568,184 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1352,909,684 - 53,538,625 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1352,651,031 - 53,476,080 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01353,378,322 - 54,210,364 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1353,378,109 - 54,181,953 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11353,058,300 - 53,887,839 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01352,577,693 - 53,373,845 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01353,501,337 - 54,367,460 (+)NCBIUU_Cfam_GSD_1.0
Adgrl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528522,750,332 - 23,528,212 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365825,338,982 - 5,819,018 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365825,313,215 - 6,091,351 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADGRL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl859,987,413 - 60,793,857 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1859,988,280 - 60,800,177 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ADGRL3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.176,726,400 - 7,261,059 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660667,000,551 - 7,860,788 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adgrl3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247617,242,948 - 7,804,418 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247617,219,269 - 8,101,988 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Adgrl3
5747 total Variants

Predicted Target Of
Summary Value
Count of predictions:317
Count of miRNA genes:180
Interacting mature miRNAs:210
Transcripts:ENSRNOT00000044659, ENSRNOT00000048175, ENSRNOT00000059942
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 19 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141103081230320092Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062228035204Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat

1 to 10 of 19 rows
D14Rat41  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81426,939,759 - 26,939,895 (+)Marker Load Pipeline
mRatBN7.21426,585,205 - 26,585,343 (+)MAPPERmRatBN7.2
Rnor_6.01428,610,223 - 28,610,358NCBIRnor6.0
Rnor_5.01428,430,315 - 28,430,450UniSTSRnor5.0
RGSC_v3.41428,613,332 - 28,613,468RGDRGSC3.4
RGSC_v3.41428,613,333 - 28,613,468UniSTSRGSC3.4
RGSC_v3.11428,613,272 - 28,613,579RGD
Celera1425,946,331 - 25,946,466UniSTS
SHRSP x BN Map1415.94RGD
SHRSP x BN Map1415.94UniSTS
FHH x ACI Map1426.22RGD
Cytogenetic Map14p21UniSTS
RH131601  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21426,632,977 - 26,633,164 (+)MAPPERmRatBN7.2
Rnor_6.01428,660,581 - 28,660,767NCBIRnor6.0
Rnor_5.01428,478,328 - 28,478,514UniSTSRnor5.0
RGSC_v3.41428,661,008 - 28,661,194UniSTSRGSC3.4
Celera1425,994,511 - 25,994,697UniSTS
RH 3.4 Map14337.9UniSTS
Cytogenetic Map14p21UniSTS
RH144064  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21426,374,479 - 26,374,617 (+)MAPPERmRatBN7.2
Rnor_6.01428,398,820 - 28,398,957NCBIRnor6.0
Rnor_5.01428,220,371 - 28,220,508UniSTSRnor5.0
RGSC_v3.41428,391,019 - 28,391,156UniSTSRGSC3.4
RGSC_v3.41428,316,659 - 28,316,796UniSTSRGSC3.4
Celera1425,737,358 - 25,737,495UniSTS
RH 3.4 Map14338.4UniSTS
Cytogenetic Map14p21UniSTS
BF397398  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21426,582,800 - 26,582,934 (+)MAPPERmRatBN7.2
Rnor_6.01428,607,818 - 28,607,951NCBIRnor6.0
Rnor_5.01428,427,910 - 28,428,043UniSTSRnor5.0
RGSC_v3.41428,610,928 - 28,611,061UniSTSRGSC3.4
Celera1425,943,926 - 25,944,059UniSTS
RH 3.4 Map14336.8UniSTS
Cytogenetic Map14p21UniSTS
BE107836  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21426,574,328 - 26,574,479 (+)MAPPERmRatBN7.2
Rnor_6.01428,599,348 - 28,599,498NCBIRnor6.0
Rnor_5.01428,419,440 - 28,419,590UniSTSRnor5.0
RGSC_v3.41428,602,458 - 28,602,608UniSTSRGSC3.4
RH 3.4 Map14340.3UniSTS
Cytogenetic Map14p21UniSTS


This gene Adgrl3 is modified in the following models/strains:




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 30 of 37 rows
RefSeq Transcripts NM_130822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008769970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF063103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 37 rows

Ensembl Acc Id: ENSRNOT00000044659   ⟹   ENSRNOP00000045365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,223 - 27,105,860 (-)Ensembl
Rnor_6.0 Ensembl1428,393,563 - 28,856,214 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000048175   ⟹   ENSRNOP00000039467
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
Rnor_6.0 Ensembl1428,394,103 - 28,967,980 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000059942   ⟹   ENSRNOP00000056687
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
Rnor_6.0 Ensembl1428,393,394 - 28,536,260 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100277   ⟹   ENSRNOP00000096360
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,368,584 - 27,105,860 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000103416   ⟹   ENSRNOP00000084026
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000106702   ⟹   ENSRNOP00000092249
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,368,277 - 27,105,860 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112088   ⟹   ENSRNOP00000083229
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112583   ⟹   ENSRNOP00000076473
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112920   ⟹   ENSRNOP00000079850
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,368,277 - 27,105,860 (-)Ensembl
RefSeq Acc Id: NM_130822   ⟹   NP_570835
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,722,194 - 27,458,104 (-)NCBI
mRatBN7.21426,367,629 - 27,103,586 (-)NCBI
Rnor_6.01428,392,913 - 28,856,315 (-)NCBI
Rnor_5.01428,183,727 - 29,040,121 (-)NCBI
RGSC_v3.41428,385,112 - 28,854,677 (-)RGD
Celera1425,731,451 - 26,185,004 (-)RGD
Sequence:
RefSeq Acc Id: XM_008769970   ⟹   XP_008768192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,367,627 - 27,104,059 (-)NCBI
Rnor_6.01428,386,354 - 29,226,085 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599059   ⟹   XP_017454548
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,367,627 - 27,104,059 (-)NCBI
Rnor_6.01428,386,354 - 29,226,085 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039091579   ⟹   XP_038947507
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,367,627 - 27,104,056 (-)NCBI
RefSeq Acc Id: XM_039091582   ⟹   XP_038947510
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,367,627 - 27,104,056 (-)NCBI
RefSeq Acc Id: XM_039091584   ⟹   XP_038947512
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,369,866 - 27,104,059 (-)NCBI
RefSeq Acc Id: XM_039091585   ⟹   XP_038947513
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,369,866 - 27,104,057 (-)NCBI
RefSeq Acc Id: XM_039091587   ⟹   XP_038947515
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,369,866 - 27,104,056 (-)NCBI
RefSeq Acc Id: XM_063272818   ⟹   XP_063128888
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,129 (-)NCBI
RefSeq Acc Id: XM_063272819   ⟹   XP_063128889
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272820   ⟹   XP_063128890
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272821   ⟹   XP_063128891
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272822   ⟹   XP_063128892
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272823   ⟹   XP_063128893
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272824   ⟹   XP_063128894
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272825   ⟹   XP_063128895
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272826   ⟹   XP_063128896
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,129 (-)NCBI
RefSeq Acc Id: XM_063272827   ⟹   XP_063128897
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272828   ⟹   XP_063128898
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272829   ⟹   XP_063128899
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272830   ⟹   XP_063128900
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272831   ⟹   XP_063128901
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272832   ⟹   XP_063128902
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,690,891 - 27,458,129 (-)NCBI
RefSeq Acc Id: XM_063272833   ⟹   XP_063128903
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,690,891 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272834   ⟹   XP_063128904
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,690,891 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272835   ⟹   XP_063128905
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,690,891 - 27,458,132 (-)NCBI
1 to 30 of 49 rows
Protein RefSeqs NP_570835 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768192 (Get FASTA)   NCBI Sequence Viewer  
  XP_017454548 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947507 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947510 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947512 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947513 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947515 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128888 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128889 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128890 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128891 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128892 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128893 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128894 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128895 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128896 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128897 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128898 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128899 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128900 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128901 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128902 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128903 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128904 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128905 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC62660 (Get FASTA)   NCBI Sequence Viewer  
  AAC62661 (Get FASTA)   NCBI Sequence Viewer  
  AAC62662 (Get FASTA)   NCBI Sequence Viewer  
  AAC62663 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 49 rows
1 to 5 of 35 rows
1 to 5 of 35 rows
RefSeq Acc Id: NP_570835   ⟸   NM_130822
- Peptide Label: precursor
- UniProtKB: Q9Z173 (UniProtKB/Swiss-Prot),   Q4LDM8 (UniProtKB/Swiss-Prot),   Q4LDM7 (UniProtKB/Swiss-Prot),   Q4LDM6 (UniProtKB/Swiss-Prot),   Q4LDM5 (UniProtKB/Swiss-Prot),   Q4LDM4 (UniProtKB/Swiss-Prot),   O88929 (UniProtKB/Swiss-Prot),   O88928 (UniProtKB/Swiss-Prot),   O88927 (UniProtKB/Swiss-Prot),   O88926 (UniProtKB/Swiss-Prot),   O88925 (UniProtKB/Swiss-Prot),   O88924 (UniProtKB/Swiss-Prot),   A0A8I6GLK1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768192   ⟸   XM_008769970
- Peptide Label: isoform X2
- UniProtKB: D4AAL4 (UniProtKB/TrEMBL),   A6JCT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454548   ⟸   XM_017599059
- Peptide Label: isoform X1
- UniProtKB: A6JCT7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000056687   ⟸   ENSRNOT00000059942
Ensembl Acc Id: ENSRNOP00000039467   ⟸   ENSRNOT00000048175
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z173-F1-model_v2 AlphaFold Q9Z173 1-1550 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 40 of 89 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-16030 BioCyc
Ensembl Genes ENSRNOG00000030149 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000044659 ENTREZGENE
  ENSRNOT00000048175 ENTREZGENE
  ENSRNOT00000059942 ENTREZGENE
  ENSRNOT00000100277 ENTREZGENE
  ENSRNOT00000112088 ENTREZGENE
  ENSRNOT00000131643 ENTREZGENE
Gene3D-CATH 1.25.40.610 UniProtKB/Swiss-Prot
  2.60.120.740 UniProtKB/Swiss-Prot
  2.60.220.50 UniProtKB/Swiss-Prot
  4.10.1240.10 UniProtKB/Swiss-Prot
  Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot
InterPro GAIN_dom_N UniProtKB/Swiss-Prot
  GAIN_dom_sf UniProtKB/Swiss-Prot
  GPCR_2-like UniProtKB/Swiss-Prot
  GPCR_2_extracell_dom_sf UniProtKB/Swiss-Prot
  GPCR_2_extracellular_dom UniProtKB/Swiss-Prot
  GPCR_2_latrophilin UniProtKB/Swiss-Prot
  GPCR_2_latrophilin_rcpt_C UniProtKB/Swiss-Prot
  GPCR_2_secretin-like UniProtKB/Swiss-Prot
  GPCR_2_secretin-like_CS UniProtKB/Swiss-Prot
  GPS UniProtKB/Swiss-Prot
  Lectin_gal-bd_dom UniProtKB/Swiss-Prot
  Lectin_gal-bd_sf UniProtKB/Swiss-Prot
  Olfac-like_dom UniProtKB/Swiss-Prot
KEGG Report rno:170641 UniProtKB/Swiss-Prot
NCBI Gene 170641 ENTREZGENE
PANTHER ADHESION G-PROTEIN COUPLED RECEPTOR UniProtKB/Swiss-Prot
  PTHR12011:SF60 UniProtKB/Swiss-Prot
Pfam 7tm_2 UniProtKB/Swiss-Prot
  GAIN UniProtKB/Swiss-Prot
  Gal_Lectin UniProtKB/Swiss-Prot
  GPS UniProtKB/Swiss-Prot
  HRM UniProtKB/Swiss-Prot
  Latrophilin UniProtKB/Swiss-Prot
  OLF UniProtKB/Swiss-Prot
PhenoGen Adgrl3 PhenoGen
PRINTS GPCRSECRETIN UniProtKB/Swiss-Prot
  LATROPHILIN UniProtKB/Swiss-Prot
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Lphn3  latrophilin 3    calcium-independent alpha-latrotoxin receptor homolog 3  Name updated 1299863 APPROVED
2004-09-10 Lphn3  calcium-independent alpha-latrotoxin receptor homolog 3  Cirl3    Symbol and Name updated 1299863 APPROVED
2002-08-07 Cirl3  calcium-independent alpha-latrotoxin receptor homolog 3      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_expression predominantly expressed in brain 632388