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Gene: Ube2i (ubiquitin-conjugating enzyme E2I) Rattus norvegicus

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Symbol:

Ube2i

Name:

ubiquitin-conjugating enzyme E2I

RGD ID:

3926

Description:

Enables bHLH transcription factor binding activity; ionotropic glutamate receptor binding activity; and ubiquitin-like protein transferase activity. Involved in several processes, including positive regulation of DNA-binding transcription factor activity; protein sumoylation; and regulation of signal transduction. Located in dendrite and nucleus. Orthologous to human UBE2I (ubiquitin conjugating enzyme E2 I); PARTICIPATES IN altered ubiquitin/proteasome degradation pathway; Alzheimer's disease pathway; sumoylation pathway; INTERACTS WITH (+)-pilocarpine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

MGC105476; RING-type E3 SUMO transferase UBC9; SUMO-conjugating enzyme UBC9; SUMO-protein ligase; Ubc9; UbcE2A; ubiquitin carrier protein 9; ubiquitin carrier protein I; Ubiquitin conjugating enzyme E2I; Ubiquitin conjugating enzyme E2I (homologous to yeast UBC9); ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast); ubiquitin-conjugating enzyme UbcE2A; ubiquitin-protein ligase I

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	UBE2I (ubiquitin conjugating enzyme E2 I)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ube2i (ubiquitin-conjugating enzyme E2I)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ube2i (ubiquitin conjugating enzyme E2 I)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	UBE2I (ubiquitin conjugating enzyme E2 I)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	UBE2I (ubiquitin conjugating enzyme E2 I)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ube2i (ubiquitin conjugating enzyme E2 I)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	UBE2I (ubiquitin conjugating enzyme E2 I)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	UBE2I (ubiquitin conjugating enzyme E2 I)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ube2i (ubiquitin conjugating enzyme E2 I)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Ube2i (ubiquitin-conjugating enzyme E2I)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	UBE2I (ubiquitin conjugating enzyme E2 I)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ube2ia (ubiquitin-conjugating enzyme E2Ia)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Danio rerio (zebrafish):	ube2ib (ubiquitin-conjugating enzyme E2Ib)	Alliance	DIOPT (OMA\|OrthoFinder\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	UBC9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	lwr	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ubc-9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ube2i	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Candidate Gene For:

Bmd4

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	14,782,245 - 14,802,911 (-)	NCBI		GRCr8
mRatBN7.2	10	14,277,749 - 14,294,681 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	69,701,618 - 69,702,443 (+)	Ensembl		mRatBN7.2 Ensembl
mRatBN7.2 Ensembl	10	14,277,749 - 14,295,136 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	19,019,943 - 19,034,557 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	18,508,805 - 18,523,419 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	14,008,012 - 14,022,626 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	14,618,615 - 14,639,274 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	14,620,531 - 14,630,151 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	14,436,200 - 14,456,889 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	14,509,948 - 14,524,551 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	14,509,950 - 14,524,551 (-)	NCBI
Celera	10	13,951,568 - 13,966,171 (-)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ube2i	Rat	dilated cardiomyopathy		ISO	UBE2I (Homo sapiens)	13831294	mRNA:increased expression:left ventricle	RGD
Ube2i	Rat	Experimental Mammary Neoplasms		ISO	UBE2I (Homo sapiens)	2301345	MCF-7 human breast cancer cell tumors grown in nude mice	RGD
Ube2i	Rat	ovarian cancer		ISO	UBE2I (Homo sapiens)	2301345	mRNA:increased expression:tumor:relative to normal ovarian epithelium from the same patient (p<0.01) (human)	RGD
Ube2i	Rat	urinary bladder cancer		ISO	UBE2I (Homo sapiens)	2301343	radiation-induced dysplasia and carcinoma in situ and protein:increased expression:bladder urothelium:increased in Chernobyl victims vs controls from uncontaminated areas of the Ukraine (p<0.001) (human)	RGD

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ube2i	Rat	epilepsy		ISO	UBE2I (Homo sapiens)	8554872	ClinVar Annotator: match by term: Epilepsy	ClinVar	PMID:28492532
Ube2i	Rat	Idiopathic Generalized Epilepsy		ISO	UBE2I (Homo sapiens)	8554872	ClinVar Annotator: match by term: Idiopathic generalized epilepsy	ClinVar	PMID:28492532
Ube2i	Rat	short-rib thoracic dysplasia 9 with or without polydactyly		ISO	UBE2I (Homo sapiens)	8554872	ClinVar Annotator: match by term: Saldino-Mainzer syndrome	ClinVar	PMID:19370764 more ...
Ube2i	Rat	tuberous sclerosis 2		ISO	UBE2I (Homo sapiens)	8554872	ClinVar Annotator: match by term: Tuberous sclerosis 2	ClinVar	PMID:16114042 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ube2i	Rat	Animal Mammary Neoplasms		ISO	UBE2I (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:16316942
Ube2i	Rat	carcinoma		ISO	UBE2I (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:16316942
Ube2i	Rat	Experimental Mammary Neoplasms		ISO	UBE2I (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:16316942

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ube2i	Rat	(+)-pilocarpine	increases expression	EXP		6480464	Pilocarpine results in increased expression of UBE2I mRNA	CTD	PMID:17971868
Ube2i	Rat	(S)-nicotine	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Nicotine results in decreased expression of UBE2I mRNA	CTD	PMID:18247414
Ube2i	Rat	1,2-dichloroethane	increases expression	ISO	Ube2i (Mus musculus)	6480464	ethylene dichloride results in increased expression of UBE2I mRNA	CTD	PMID:28960355
Ube2i	Rat	1,2-dimethylhydrazine	increases expression	ISO	Ube2i (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in increased expression of UBE2I mRNA	CTD	PMID:22206623
Ube2i	Rat	1-chloro-2,4-dinitrobenzene	affects binding	ISO	UBE2I (Homo sapiens)	6480464	Dinitrochlorobenzene binds to UBE2I protein	CTD	PMID:32991956
Ube2i	Rat	17beta-estradiol	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	Estradiol promotes the reaction [UBE2I protein binds to ESR1 protein]	CTD	PMID:15666801
Ube2i	Rat	17beta-estradiol	increases expression	ISO	Ube2i (Mus musculus)	6480464	Estradiol results in increased expression of UBE2I mRNA	CTD	PMID:39298647
Ube2i	Rat	1H-pyrazole	increases expression	ISO	Ube2i (Mus musculus)	6480464	pyrazole results in increased expression of UBE2I mRNA	CTD	PMID:17945193
Ube2i	Rat	2,3,7,8-tetrachlorodibenzodioxine	multiple interactions	ISO	Ube2i (Mus musculus)	6480464	UBE2I promotes the reaction [Tetrachlorodibenzodioxin results in increased activity of CYP1A1 protein]	CTD	PMID:23997114
Ube2i	Rat	2,4-dinitrotoluene	affects expression	EXP		6480464	2 and 4-dinitrotoluene affects the expression of UBE2I mRNA	CTD	PMID:21346803
Ube2i	Rat	2-naphthylamine	increases expression	ISO	UBE2I (Homo sapiens)	6480464	2-Naphthylamine results in increased expression of UBE2I mRNA	CTD	PMID:18247414
Ube2i	Rat	4,4'-sulfonyldiphenol	increases expression	ISO	Ube2i (Mus musculus)	6480464	bisphenol S results in increased expression of UBE2I mRNA	CTD	PMID:39298647
Ube2i	Rat	4-hydroxynon-2-enal	increases expression	ISO	Ube2i (Mus musculus)	6480464	4-hydroxy-2-nonenal results in increased expression of UBE2I mRNA	CTD	PMID:19191707
Ube2i	Rat	6-propyl-2-thiouracil	increases expression	EXP		6480464	Propylthiouracil results in increased expression of UBE2I mRNA	CTD	PMID:30047161
Ube2i	Rat	acrylamide	decreases expression	ISO	Ube2i (Mus musculus)	6480464	Acrylamide results in decreased expression of UBE2I mRNA	CTD	PMID:21319176
Ube2i	Rat	actinomycin D	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[Dactinomycin co-treated with nutlin 3] results in increased secretion of UBE2I protein	CTD	PMID:38460933
Ube2i	Rat	aflatoxin B1	increases expression	ISO	UBE2I (Homo sapiens)	6480464	Aflatoxin B1 results in increased expression of UBE2I mRNA	CTD	PMID:27153756
Ube2i	Rat	all-trans-retinoic acid	increases expression	ISO	UBE2I (Homo sapiens)	6480464	Tretinoin results in increased expression of UBE2I mRNA	CTD	PMID:23724009
Ube2i	Rat	amitrole	increases expression	EXP		6480464	Amitrole results in increased expression of UBE2I mRNA	CTD	PMID:30047161
Ube2i	Rat	ammonium chloride	affects expression	EXP		6480464	Ammonium Chloride affects the expression of UBE2I mRNA	CTD	PMID:16483693
Ube2i	Rat	antirheumatic drug	increases expression	ISO	UBE2I (Homo sapiens)	6480464	Antirheumatic Agents results in increased expression of UBE2I mRNA	CTD	PMID:24449571
Ube2i	Rat	arsane	affects methylation	ISO	UBE2I (Homo sapiens)	6480464	Arsenic affects the methylation of UBE2I gene	CTD	PMID:25304211
Ube2i	Rat	arsenic atom	affects methylation	ISO	UBE2I (Homo sapiens)	6480464	Arsenic affects the methylation of UBE2I gene	CTD	PMID:25304211
Ube2i	Rat	arsenous acid	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[Arsenic Trioxide promotes the reaction [UBE2I protein binds to PML protein]] which results in increased sumoylation of PML protein more ...	CTD	PMID:20378816 and PMID:32240679
Ube2i	Rat	benzo[a]pyrene	increases expression	ISO	Ube2i (Mus musculus)	6480464	Benzo(a)pyrene results in increased expression of UBE2I mRNA	CTD	PMID:19770486 and PMID:20504355
Ube2i	Rat	benzo[a]pyrene	affects methylation	ISO	UBE2I (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of UBE2I 3' UTR	CTD	PMID:27901495
Ube2i	Rat	benzo[a]pyrene	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased expression of UBE2I mRNA	CTD	PMID:18247414
Ube2i	Rat	bilirubin IXalpha	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Bilirubin results in decreased expression of UBE2I mRNA	CTD	PMID:20196124
Ube2i	Rat	bis(2-ethylhexyl) phthalate	increases expression	EXP		6480464	Diethylhexyl Phthalate results in increased expression of UBE2I mRNA	CTD	PMID:21318169
Ube2i	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of UBE2I mRNA	CTD	PMID:25181051
Ube2i	Rat	bisphenol A	increases expression	ISO	Ube2i (Mus musculus)	6480464	bisphenol A results in increased expression of UBE2I mRNA	CTD	PMID:33221593
Ube2i	Rat	bisphenol A	increases expression	ISO	UBE2I (Homo sapiens)	6480464	bisphenol A results in increased expression of UBE2I mRNA and bisphenol A results in increased expression of UBE2I protein	CTD	PMID:30426790 and PMID:34186270
Ube2i	Rat	calcium atom	affects expression	EXP		6480464	Calcium affects the expression of UBE2I mRNA	CTD	PMID:15913539
Ube2i	Rat	calcium(0)	affects expression	EXP		6480464	Calcium affects the expression of UBE2I mRNA	CTD	PMID:15913539
Ube2i	Rat	CARBENOXOLONE	multiple interactions	EXP		6480464	Carbenoxolone inhibits the reaction [Sodium Glutamate results in decreased expression of UBE2I protein]	CTD	PMID:31077719
Ube2i	Rat	carbon nanotube	increases expression	ISO	Ube2i (Mus musculus)	6480464	Nanotubes more ...	CTD	PMID:25554681
Ube2i	Rat	CGP 52608	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to UBE2I gene]	CTD	PMID:28238834
Ube2i	Rat	chlorpyrifos	increases expression	ISO	Ube2i (Mus musculus)	6480464	Chlorpyrifos results in increased expression of UBE2I mRNA	CTD	PMID:20350560
Ube2i	Rat	cholesterol	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	UBE2I protein inhibits the reaction [Lipopolysaccharides results in increased abundance of Cholesterol]	CTD	PMID:33677747
Ube2i	Rat	ciguatoxin CTX1B	affects expression	ISO	Ube2i (Mus musculus)	6480464	Ciguatoxins affects the expression of UBE2I mRNA	CTD	PMID:18353800
Ube2i	Rat	clofibrate	increases expression	EXP		6480464	Clofibrate results in increased expression of UBE2I mRNA	CTD	PMID:21318169
Ube2i	Rat	cocaine	increases expression	ISO	UBE2I (Homo sapiens)	6480464	Cocaine results in increased expression of UBE2I mRNA	CTD	PMID:12629581
Ube2i	Rat	copper atom	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[Thiosemicarbazones binds to Copper] which results in decreased expression of UBE2I protein	CTD	PMID:20931265
Ube2i	Rat	copper(0)	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[Thiosemicarbazones binds to Copper] which results in decreased expression of UBE2I protein	CTD	PMID:20931265
Ube2i	Rat	D-gluconic acid	multiple interactions	EXP		6480464	[gluconic acid co-treated with Deoxycholic Acid] results in increased expression of UBE2I mRNA	CTD	PMID:16556975
Ube2i	Rat	DDE	increases expression	ISO	UBE2I (Homo sapiens)	6480464	Dichlorodiphenyl Dichloroethylene results in increased expression of UBE2I mRNA	CTD	PMID:38568856
Ube2i	Rat	deoxycholic acid	multiple interactions	EXP		6480464	[gluconic acid co-treated with Deoxycholic Acid] results in increased expression of UBE2I mRNA	CTD	PMID:16556975
Ube2i	Rat	dexamethasone	multiple interactions	ISO	Ube2i (Mus musculus)	6480464	benzyloxycarbonyl-isoleucyl-glutamyl-threonyl-aspartic acid fluoromethyl ketone inhibits the reaction [Dexamethasone promotes the reaction [TSC22D3 protein binds to UBE2I protein]] and Dexamethasone promotes the reaction [TSC22D3 protein binds to UBE2I protein]	CTD	PMID:20671745
Ube2i	Rat	diarsenic trioxide	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[Arsenic Trioxide promotes the reaction [UBE2I protein binds to PML protein]] which results in increased sumoylation of PML protein more ...	CTD	PMID:20378816 and PMID:32240679
Ube2i	Rat	dibutyl phthalate	decreases expression	ISO	Ube2i (Mus musculus)	6480464	Dibutyl Phthalate results in decreased expression of UBE2I mRNA	CTD	PMID:21266533
Ube2i	Rat	dioxygen	multiple interactions	EXP		6480464	[Oxygen deficiency co-treated with Blood Glucose deficiency] results in increased expression of UBE2I protein and Prasugrel Hydrochloride inhibits the reaction [[Oxygen deficiency co-treated with Blood Glucose deficiency] results in increased expression of UBE2I protein]	CTD	PMID:34174262
Ube2i	Rat	dorsomorphin	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Ube2i	Rat	doxorubicin	increases expression	ISO	Ube2i (Mus musculus)	6480464	Doxorubicin results in increased expression of UBE2I mRNA	CTD	PMID:25896364
Ube2i	Rat	doxorubicin	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Doxorubicin results in decreased expression of UBE2I mRNA	CTD	PMID:29803840
Ube2i	Rat	emodin	increases expression	ISO	Ube2i (Mus musculus)	6480464	Emodin results in increased expression of UBE2I mRNA	CTD	PMID:21319176
Ube2i	Rat	endosulfan	increases expression	ISO	UBE2I (Homo sapiens)	6480464	Endosulfan results in increased expression of UBE2I mRNA	CTD	PMID:30426790
Ube2i	Rat	ethanol	affects splicing	ISO	Ube2i (Mus musculus)	6480464	Ethanol affects the splicing of UBE2I mRNA	CTD	PMID:30319688
Ube2i	Rat	fipronil	decreases expression	EXP		6480464	fipronil results in decreased expression of UBE2I mRNA	CTD	PMID:34044035
Ube2i	Rat	flavonoids	decreases expression	EXP		6480464	Flavonoids results in decreased expression of UBE2I mRNA	CTD	PMID:18035473
Ube2i	Rat	folic acid	increases expression	ISO	Ube2i (Mus musculus)	6480464	Folic Acid results in increased expression of UBE2I mRNA	CTD	PMID:25629700
Ube2i	Rat	genistein	increases expression	ISO	Ube2i (Mus musculus)	6480464	Genistein results in increased expression of UBE2I mRNA	CTD	PMID:32186404
Ube2i	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of UBE2I mRNA	CTD	PMID:22061828
Ube2i	Rat	glyphosate	decreases expression	ISO	Ube2i (Mus musculus)	6480464	Glyphosate results in decreased expression of UBE2I protein	CTD	PMID:37208198
Ube2i	Rat	ivermectin	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Ivermectin results in decreased expression of UBE2I protein	CTD	PMID:32959892
Ube2i	Rat	lipopolysaccharide	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Lipopolysaccharides results in decreased expression of UBE2I mRNA and Lipopolysaccharides results in decreased expression of UBE2I protein	CTD	PMID:33677747
Ube2i	Rat	lipopolysaccharide	decreases expression	EXP		6480464	Lipopolysaccharides results in decreased expression of UBE2I protein	CTD	PMID:33677747
Ube2i	Rat	lipopolysaccharide	multiple interactions	EXP		6480464	ethyl 6-(N-(2-chloro-4-fluorophenyl)sulfamoyl)cyclohex-1-ene-1-carboxylate inhibits the reaction [Lipopolysaccharides results in decreased expression of UBE2I protein]	CTD	PMID:33677747
Ube2i	Rat	lipopolysaccharide	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	MIR590 mRNA inhibits the reaction [Lipopolysaccharides results in decreased expression of UBE2I protein] more ...	CTD	PMID:33677747
Ube2i	Rat	methimazole	increases expression	EXP		6480464	Methimazole results in increased expression of UBE2I mRNA	CTD	PMID:30047161
Ube2i	Rat	methotrexate	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Methotrexate results in decreased expression of UBE2I mRNA	CTD	PMID:24449571
Ube2i	Rat	methylmercury chloride	increases expression	ISO	Ube2i (Mus musculus)	6480464	methylmercuric chloride results in increased expression of UBE2I mRNA	CTD	PMID:20061341
Ube2i	Rat	methylmercury chloride	increases expression	ISO	UBE2I (Homo sapiens)	6480464	methylmercuric chloride results in increased expression of UBE2I mRNA	CTD	PMID:28001369
Ube2i	Rat	mevinphos	multiple interactions	EXP		6480464	Mevinphos results in increased expression of and results in increased activity of UBE2I protein and UBE2I protein affects the reaction [Mevinphos results in increased expression of and results in increased activity of HIF1A protein]	CTD	PMID:21390240
Ube2i	Rat	monosodium L-glutamate	decreases expression	EXP		6480464	Sodium Glutamate results in decreased expression of UBE2I protein	CTD	PMID:31077719
Ube2i	Rat	monosodium L-glutamate	multiple interactions	EXP		6480464	Carbenoxolone inhibits the reaction [Sodium Glutamate results in decreased expression of UBE2I protein]	CTD	PMID:31077719
Ube2i	Rat	nicotine	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Nicotine results in decreased expression of UBE2I mRNA	CTD	PMID:18247414
Ube2i	Rat	nimesulide	increases expression	EXP		6480464	nimesulide results in increased expression of UBE2I mRNA	CTD	PMID:24136188
Ube2i	Rat	nitrates	multiple interactions	ISO	Ube2i (Mus musculus)	6480464	[Particulate Matter results in increased abundance of Nitrates] which results in increased expression of UBE2I mRNA	CTD	PMID:35964746
Ube2i	Rat	Nutlin-3	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[Dactinomycin co-treated with nutlin 3] results in increased secretion of UBE2I protein	CTD	PMID:38460933
Ube2i	Rat	paracetamol	affects expression	ISO	Ube2i (Mus musculus)	6480464	Acetaminophen affects the expression of UBE2I mRNA	CTD	PMID:17562736
Ube2i	Rat	pentachlorophenol	increases expression	ISO	Ube2i (Mus musculus)	6480464	Pentachlorophenol results in increased expression of UBE2I mRNA	CTD	PMID:23892564
Ube2i	Rat	phenobarbital	decreases expression	ISO	Ube2i (Mus musculus)	6480464	Phenobarbital results in decreased expression of UBE2I mRNA	CTD	PMID:23091169
Ube2i	Rat	phenylmercury acetate	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Phenylmercuric Acetate results in decreased expression of UBE2I mRNA	CTD	PMID:26272509
Ube2i	Rat	phenylmercury acetate	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of UBE2I mRNA	CTD	PMID:27188386
Ube2i	Rat	phlorizin	decreases expression	ISO	Ube2i (Mus musculus)	6480464	Phlorhizin results in decreased expression of UBE2I mRNA	CTD	PMID:22538082
Ube2i	Rat	pirinixic acid	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[pirinixic acid binds to and results in increased activity of PPARA protein] which results in decreased expression of UBE2I mRNA	CTD	PMID:19710929
Ube2i	Rat	pirinixic acid	increases expression	ISO	Ube2i (Mus musculus)	6480464	pirinixic acid results in increased expression of UBE2I mRNA	CTD	PMID:23811191
Ube2i	Rat	prasugrel hydrochloride	multiple interactions	EXP		6480464	Prasugrel Hydrochloride inhibits the reaction [[Oxygen deficiency co-treated with Blood Glucose deficiency] results in increased expression of UBE2I protein]	CTD	PMID:34174262
Ube2i	Rat	pregnenolone 16alpha-carbonitrile	increases expression	EXP		6480464	Pregnenolone Carbonitrile results in increased expression of UBE2I mRNA	CTD	PMID:30047161
Ube2i	Rat	propiconazole	decreases expression	ISO	Ube2i (Mus musculus)	6480464	propiconazole results in decreased expression of UBE2I mRNA	CTD	PMID:21278054
Ube2i	Rat	rifampicin	multiple interactions	EXP		6480464	UBE2I affects the reaction [Rifampin results in increased sumoylation of SNCA protein]	CTD	PMID:28132806
Ube2i	Rat	SB 431542	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[LDN 193189 co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386 and PMID:37664457
Ube2i	Rat	sodium arsenate	increases expression	ISO	Ube2i (Mus musculus)	6480464	sodium arsenate results in increased expression of UBE2I mRNA	CTD	PMID:21795629
Ube2i	Rat	succimer	multiple interactions	ISO	Ube2i (Mus musculus)	6480464	[Succimer co-treated with Magnetite Nanoparticles] results in decreased expression of UBE2I mRNA	CTD	PMID:26378955
Ube2i	Rat	sulfadimethoxine	increases expression	EXP		6480464	Sulfadimethoxine results in increased expression of UBE2I mRNA	CTD	PMID:30047161
Ube2i	Rat	sunitinib	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Sunitinib results in decreased expression of UBE2I mRNA	CTD	PMID:31533062
Ube2i	Rat	thapsigargin	decreases expression	EXP		6480464	Thapsigargin results in decreased expression of UBE2I protein	CTD	PMID:35544339
Ube2i	Rat	thioacetamide	decreases expression	EXP		6480464	Thioacetamide results in decreased expression of UBE2I protein	CTD	PMID:33677747
Ube2i	Rat	topotecan	affects response to substance	ISO	UBE2I (Homo sapiens)	6480464	UBE2I protein affects the susceptibility to Topotecan	CTD	PMID:16217747
Ube2i	Rat	trichostatin A	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	trichostatin A results in decreased expression of UBE2I mRNA	CTD	PMID:26272509
Ube2i	Rat	trichostatin A	multiple interactions	ISO	UBE2I (Homo sapiens)	6480464	[NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of UBE2I mRNA	CTD	PMID:27188386
Ube2i	Rat	triphenyl phosphate	affects expression	ISO	UBE2I (Homo sapiens)	6480464	triphenyl phosphate affects the expression of UBE2I mRNA	CTD	PMID:37042841
Ube2i	Rat	trovafloxacin	multiple interactions	ISO	Ube2i (Mus musculus)	6480464	[trovafloxacin co-treated with lipopolysaccharide and E coli O55-B5] results in decreased expression of UBE2I mRNA	CTD	PMID:18930950
Ube2i	Rat	valproic acid	increases methylation	ISO	UBE2I (Homo sapiens)	6480464	Valproic Acid results in increased methylation of UBE2I gene	CTD	PMID:29154799
Ube2i	Rat	valproic acid	increases expression	ISO	UBE2I (Homo sapiens)	6480464	Valproic Acid results in increased expression of UBE2I mRNA	CTD	PMID:23179753
Ube2i	Rat	vincristine	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	Vincristine results in decreased expression of UBE2I mRNA	CTD	PMID:23649840
Ube2i	Rat	vorinostat	decreases expression	ISO	UBE2I (Homo sapiens)	6480464	vorinostat results in decreased expression of UBE2I protein	CTD	PMID:20543569
Ube2i	Rat	zinc sulfate	increases expression	ISO	UBE2I (Homo sapiens)	6480464	Zinc Sulfate results in increased expression of UBE2I mRNA	CTD	PMID:12756304

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ube2i	Rat	cell division	involved_in	IEA	UniProtKB-KW:KW-0132	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Ube2i	Rat	chromosome segregation	involved_in	IEA	UniProtKB-KW:KW-0159	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Ube2i	Rat	modulation of chemical synaptic transmission	involved_in	ISO	Ube2i (Mus musculus)	1624291	PMID:25448527	RGD	PMID:25448527
Ube2i	Rat	negative regulation of DNA-templated transcription	involved_in	ISO	UBE2I (Homo sapiens)	1624291	PMID:16631117	RGD	PMID:16631117
Ube2i	Rat	negative regulation of transcription by RNA polymerase II	involved_in	ISO	UBE2I (Homo sapiens)	1624291	PMID:19955185	RGD	PMID:19955185
Ube2i	Rat	negative regulation of transcription by RNA polymerase II	involved_in	ISO	Ube2i (Mus musculus)	1624291	PMID:16127449	RGD	PMID:16127449
Ube2i	Rat	nuclear export	involved_in	ISO	UBE2I (Homo sapiens)	1624291	PMID:27160050	RGD	PMID:27160050
Ube2i	Rat	nuclear export	involved_in	ISO	Ube2i (Mus musculus)	1624291	PMID:27160050	RGD	PMID:27160050
Ube2i	Rat	positive regulation of canonical NF-kappaB signal transduction	acts_upstream_of_or_within	ISO	Ube2i (Mus musculus)	1624291	PMID:9223278	RGD	PMID:9223278
Ube2i	Rat	positive regulation of cell migration	involved_in	ISO	UBE2I (Homo sapiens)	1624291	PMID:20023705	RGD	PMID:20023705
Ube2i	Rat	positive regulation of DNA-binding transcription factor activity		IDA		2301354	glucocorticoid receptor and independent of sumoylation activity or presence of a GME	RGD
Ube2i	Rat	positive regulation of intracellular steroid hormone receptor signaling pathway		IDA		2301354	glucocorticoid receptor and independent of sumoylation activity or presence of a GME	RGD
Ube2i	Rat	proteasome-mediated ubiquitin-dependent protein catabolic process		IMP		730030		RGD
Ube2i	Rat	protein sumoylation		IDA		2301354		RGD
Ube2i	Rat	protein sumoylation	involved_in	IBA	CGD:CAL0000200419 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Ube2i	Rat	protein sumoylation	involved_in	ISO	UBE2I (Homo sapiens)	1624291	PMID:15660128 more ...	RGD	PMID:15660128 more ...
Ube2i	Rat	protein sumoylation	involved_in	ISO	Ube2i (Mus musculus)	1624291	PMID:9435231	RGD	PMID:9435231
Ube2i	Rat	protein sumoylation	involved_in	IEA	UniPathway:UPA00886	1600115	GO_REF:0000041	UniProt	GO_REF:0000041
Ube2i	Rat	regulation of signaling receptor activity		IDA		2301354	glucocorticoid receptor and independent of sumoylation activity or presence of a GME	RGD
Ube2i	Rat	ubiquitin-dependent protein catabolic process		TAS		730030		RGD

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ube2i	Rat	cytoplasm	located_in	ISO	UBE2I (Homo sapiens)	1624291	PMID:9223278	RGD	PMID:9223278
Ube2i	Rat	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Ube2i	Rat	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Ube2i	Rat	dendrite		IDA		1642482		RGD
Ube2i	Rat	fibrillar center		IDA		2301351		RGD
Ube2i	Rat	glutamatergic synapse	is_active_in	ISO	Ube2i (Mus musculus)	1624291	PMID:31749687	RGD	PMID:31749687
Ube2i	Rat	nuclear body	located_in	ISO	Ube2i (Mus musculus)	1624291	PMID:18681895	RGD	PMID:18681895
Ube2i	Rat	nuclear body		IDA		2301350		RGD
Ube2i	Rat	nuclear envelope		IDA		9835353		RGD
Ube2i	Rat	nucleoplasm	is_active_in	ISO	Ube2i (Mus musculus)	1624291	PMID:18703419	RGD	PMID:18703419
Ube2i	Rat	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Ube2i	Rat	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Ube2i	Rat	nucleus	is_active_in	IBA	FB:FBgn0010602 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Ube2i	Rat	nucleus	located_in	ISO	UBE2I (Homo sapiens)	1624291	PMID:14752048 more ...	RGD	PMID:14752048 more ...
Ube2i	Rat	PML body	located_in	ISO	UBE2I (Homo sapiens)	1624291	PMID:9885291	RGD	PMID:9885291
Ube2i	Rat	postsynaptic cytosol	is_active_in	ISO	Ube2i (Mus musculus)	1624291	PMID:31749687	RGD	PMID:31749687
Ube2i	Rat	presynaptic cytosol	is_active_in	ISO	Ube2i (Mus musculus)	1624291	PMID:31749687	RGD	PMID:31749687
Ube2i	Rat	Schaffer collateral - CA1 synapse	is_active_in	ISO	Ube2i (Mus musculus)	1624291	PMID:25448527	RGD	PMID:25448527
Ube2i	Rat	SUMO ligase complex	part_of	ISO	UBE2I (Homo sapiens)	1624291	PMID:22194619	RGD	PMID:22194619
Ube2i	Rat	SUMO ligase complex	part_of	ISO	Ube2i (Mus musculus)	1624291	PMID:22207709	RGD	PMID:22207709
Ube2i	Rat	transferase complex	part_of	ISO	UBE2I (Homo sapiens)	1624291	PMID:19955185	RGD	PMID:19955185

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ube2i	Rat	ATP binding	enables	IEA	UniProtKB-KW:KW-0067	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Ube2i	Rat	ATP binding	enables	IEA	UniRule:UR000141827	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Ube2i	Rat	bHLH transcription factor binding		IPI	TCF3 (Homo sapiens)	730030		RGD
Ube2i	Rat	enzyme binding	enables	ISO	UBE2I (Homo sapiens)	1624291	UniProtKB:P35520 and PMID:17087506	RGD	PMID:17087506
Ube2i	Rat	HLH domain binding	enables	ISO	Ube2i (Mus musculus)	1624291	UniProtKB:P15923-1 more ...	RGD	PMID:9409784
Ube2i	Rat	ionotropic glutamate receptor binding		IPI	Grik2 (Rattus norvegicus)	1642482	protein C-terminus binding	RGD
Ube2i	Rat	nucleotide binding	enables	IEA	UniProtKB-KW:KW-0547	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Ube2i	Rat	protein binding		IPI	Tollip (Rattus norvegicus)	5508208		RGD
Ube2i	Rat	protein binding		IPI	GMEB1 (Homo sapiens)	2301354		RGD
Ube2i	Rat	protein binding	enables	ISO	Ube2i (Mus musculus)	1624291	PR:O08900 more ...	RGD	PMID:11025202 more ...
Ube2i	Rat	protein binding	enables	ISO	UBE2I (Sus scrofa)	1624291	UniProtKB:P21530-PRO_0000038063 and PMID:20800867	RGD	PMID:20800867
Ube2i	Rat	protein binding	enables	IPI	UniProtKB:P42260	1642482	PMID:17486098	IntAct
Ube2i	Rat	protein binding	enables	ISO	UBE2I (Homo sapiens)	1624291	UniProtKB:G2XKQ0 more ...	RGD	PMID:10871618 more ...
Ube2i	Rat	protein binding	enables	IPI	UniProtKB:P63033	8554673	PMID:19498170	UniProt
Ube2i	Rat	protein binding		IPI	Rangap1 (Rattus norvegicus)	9835353		RGD
Ube2i	Rat	protein binding		IPI	GMEB2 (Homo sapiens)	2301354		RGD
Ube2i	Rat	RING-like zinc finger domain binding	enables	ISO	UBE2I (Homo sapiens)	1624291	UniProtKB:Q969V5 and PMID:19407830	RGD	PMID:19407830
Ube2i	Rat	small protein activating enzyme binding	enables	ISO	UBE2I (Homo sapiens)	1624291	UniProtKB:Q9UBT2 and PMID:15660128	RGD	PMID:15660128
Ube2i	Rat	SUMO conjugating enzyme activity	enables	ISO	Ube2i (Mus musculus)	1624291	PMID:9435231	RGD	PMID:9435231
Ube2i	Rat	SUMO conjugating enzyme activity	enables	IBA	FB:FBgn0010602 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Ube2i	Rat	SUMO conjugating enzyme activity	enables	ISO	UBE2I (Homo sapiens)	1624291	PMID:19955185 and PMID:25187565	RGD	PMID:19955185 and PMID:25187565
Ube2i	Rat	SUMO transferase activity		IDA		2301354		RGD
Ube2i	Rat	SUMO transferase activity	enables	ISO	UBE2I (Homo sapiens)	1624291	PMID:11877416 more ...	RGD	PMID:11877416 more ...
Ube2i	Rat	transcription coregulator binding	enables	ISO	UBE2I (Homo sapiens)	1624291	UniProtKB:O14776 and PMID:20215116	RGD	PMID:20215116
Ube2i	Rat	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Ube2i	Rat	ubiquitin-protein transferase activity		IDA		730030		RGD

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ube2i	Rat	aldosterone signaling pathway		ISO	UBE2I (Homo sapiens)	7421504		RGD
Ube2i	Rat	altered ubiquitin/proteasome degradation pathway		IMP		1302873		RGD
Ube2i	Rat	Alzheimer's disease pathway		IMP		1302873		RGD
Ube2i	Rat	sumoylation pathway		IDA		1642482		RGD
Ube2i	Rat	ubiquitin/proteasome degradation pathway		IMP		730030		RGD

Imported Annotations - KEGG (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ube2i	Rat	RNA transport pathway		IEA		6907045		KEGG	rno:03013
Ube2i	Rat	ubiquitin/proteasome degradation pathway		IEA		6907045		KEGG	rno:04120

#	Reference Title	Reference Citation
1.	TWIST1 regulates the activity of ubiquitin proteasome system via the miR-199/214 cluster in human end-stage dilated cardiomyopathy.	Baumgarten A, etal., Int J Cardiol. 2013 Sep 30;168(2):1447-52. doi: 10.1016/j.ijcard.2012.12.094. Epub 2013 Jan 27.
2.	The giant fibrillar center: a nucleolar structure enriched in upstream binding factor (UBF) that appears in transcriptionally more active sensory ganglia neurons.	Casafont I, etal., J Struct Biol. 2007 Sep;159(3):451-61. Epub 2007 May 25.
3.	Tollip is a mediator of protein sumoylation.	Ciarrocchi A, etal., PLoS One. 2009;4(2):e4404. Epub 2009 Feb 9.
4.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5.	Ubc9 is a novel modulator of the induction properties of glucocorticoid receptors.	Kaul S, etal., J Biol Chem. 2002 Apr 12;277(15):12541-9. Epub 2002 Jan 25.
6.	Degradation of E2A proteins through a ubiquitin-conjugating enzyme, UbcE2A.	Kho CJ, etal., J Biol Chem 1997 Feb 7;272(6):3845-51.
7.	Modification of Ran GTPase-activating protein by the small ubiquitin-related modifier SUMO-1 requires Ubc9, an E2-type ubiquitin-conjugating enzyme homologue.	Lee GW, etal., J Biol Chem. 1998 Mar 13;273(11):6503-7.
8.	Defective ubiquitination of cerebral proteins in Alzheimer's disease.	Lopez Salon M, etal., J Neurosci Res 2000 Oct 15;62(2):302-10.
9.	SUMOylation regulates kainate-receptor-mediated synaptic transmission.	Martin S, etal., Nature. 2007 May 17;447(7142):321-5. Epub 2007 May 7.
10.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
11.	A role for Ubc9 in tumorigenesis.	Mo YY, etal., Oncogene. 2005 Apr 14;24(16):2677-83.
12.	Characterization of a new SUMO-1 nuclear body (SNB) enriched in pCREB, CBP, c-Jun in neuron-like UR61 cells.	Navascues J, etal., Chromosoma. 2007 Oct;116(5):441-51. Epub 2007 May 26.
13.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
14.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
15.	GOA pipeline	RGD automated data pipeline
16.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
17.	Involvement of ubiquitination and sumoylation in bladder lesions induced by persistent long-term low dose ionizing radiation in humans.	Romanenko AM, etal., J Urol. 2006 Feb;175(2):739-43.
18.	Rhes, a striatal specific protein, mediates mutant-huntingtin cytotoxicity.	Subramaniam S, etal., Science. 2009 Jun 5;324(5932):1327-30. doi: 10.1126/science.1172871.
19.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
20.	Interactions of the mineralocorticoid receptor--within and without.	Yang J and Fuller PJ, Mol Cell Endocrinol. 2012 Mar 24;350(2):196-205. doi: 10.1016/j.mce.2011.07.001. Epub 2011 Jul 18.

PMID:9223278	PMID:9409784	PMID:9885291	PMID:10562557	PMID:10562558	PMID:12477932	PMID:14739995	PMID:14752048	PMID:15489334	PMID:15539428	PMID:15539951	PMID:15611122
PMID:15660128	PMID:15802564	PMID:16127449	PMID:16631117	PMID:17087506	PMID:17911097	PMID:18555800	PMID:18681895	PMID:19039338	PMID:19407830	PMID:19744555	PMID:19955185
PMID:20167237	PMID:20209145	PMID:21518833	PMID:21616059	PMID:21630459	PMID:21968017	PMID:22082260	PMID:22658674	PMID:26620705	PMID:30772377	PMID:38955308

Ube2i
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	14,782,245 - 14,802,911 (-)	NCBI		GRCr8
mRatBN7.2	10	14,277,749 - 14,294,681 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	69,701,618 - 69,702,443 (+)	Ensembl		mRatBN7.2 Ensembl
mRatBN7.2 Ensembl	10	14,277,749 - 14,295,136 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	19,019,943 - 19,034,557 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	18,508,805 - 18,523,419 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	14,008,012 - 14,022,626 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	14,618,615 - 14,639,274 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	14,620,531 - 14,630,151 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	14,436,200 - 14,456,889 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	14,509,948 - 14,524,551 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	14,509,950 - 14,524,551 (-)	NCBI
Celera	10	13,951,568 - 13,966,171 (-)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

UBE2I
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	1,309,152 - 1,327,017 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	1,291,444 - 1,327,018 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	1,359,153 - 1,377,018 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	1,299,181 - 1,315,391 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	1,299,180 - 1,315,391	NCBI
Celera	16	1,573,488 - 1,589,693 (+)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	1,287,961 - 1,305,367 (+)	NCBI		HuRef
CHM1_1	16	1,359,074 - 1,376,964 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	1,325,332 - 1,343,194 (+)	NCBI		T2T-CHM13v2.0

Ube2i
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	25,479,484 - 25,494,965 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	25,479,482 - 25,493,856 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	25,260,510 - 25,275,799 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	25,261,916 - 25,274,622 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	25,397,456 - 25,411,255 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	24,988,111 - 25,001,891 (-)	NCBI		MGSCv36	mm8
Celera	17	25,787,805 - 25,801,616 (-)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	12.53	NCBI

Ube2i
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	15,901,980 - 15,913,037 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	15,902,026 - 15,913,033 (-)	NCBI	ChiLan1.0	ChiLan1.0

UBE2I
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	1,572,047 - 1,588,221 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	5,358,365 - 5,374,530 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	16	1,365,291 - 1,382,575 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	1,367,288 - 1,382,575 (+)	Ensembl	panpan1.1		panPan2

UBE2I
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	39,440,123 - 39,453,688 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	39,440,314 - 39,817,588 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	40,707,767 - 40,719,921 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	39,786,145 - 39,798,312 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	6	39,462,778 - 39,474,925 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	39,435,400 - 39,447,553 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	39,913,736 - 39,925,904 (-)	NCBI		UU_Cfam_GSD_1.0

Ube2i
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	104,133,975 - 104,147,758 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936694	2,561,681 - 2,576,647 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936694	2,561,701 - 2,571,284 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UBE2I
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	3	40,556,556 - 40,586,382 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	41,899,856 - 41,966,997 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

UBE2I
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	1,203,513 - 1,216,662 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	1,200,018 - 1,216,741 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	29,867,995 - 29,884,946 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ube2i
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624913	2,025,528 - 2,041,690 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624913	2,025,241 - 2,041,394 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Ube2i
63 total Variants

Confirmed Target Of

miRNA Gene	Mature miRNA	Method Name	Result Type	Data Type	Support Type	PMID
Mir199a2	rno-miR-199a-5p	Mirtarbase	external_info	Luciferase reporter assay	Functional MTI	20965886

Predicted Target Of

	Summary Value
Count of predictions:	225
Count of miRNA genes:	151
Interacting mature miRNAs:	175
Transcripts:	ENSRNOT00000024406
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
9589136	Insul27	Insulin level QTL 27	10.46	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	10	11474010	56474010	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6154182	73453136	Rat
2313066	Bss63	Bone structure and strength QTL 63	1.4	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	10	5387014	50387014	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	743364	63851208	Rat
2313064	Bmd71	Bone mineral density QTL 71	0.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	10	5387014	50387014	Rat
70223	Bp57	Blood pressure QTL 57	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1	80676123	Rat
634329	Pia15	Pristane induced arthritis QTL 15	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	1	24158324	Rat
1578761	Stresp21	Stress response QTL 21	3.3		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	6375746	51375746	Rat
2293680	Bss40	Bone structure and strength QTL 40	5.66	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	10	1	35225947	Rat
7387235	Uae41	Urinary albumin excretion QTL 41	5.26	0.1874	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	10	1	29497586	Rat
2298544	Neuinf9	Neuroinflammation QTL 9	4.6		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	10	5801990	62146030	Rat
10401803	Kidm50	Kidney mass QTL 50			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	10	418344	45418344	Rat
737820	Alc9	Alcohol consumption QTL 9	2.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	10	5144027	19233348	Rat
2313081	Bss64	Bone structure and strength QTL 64	1.3	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	10	5387014	50387014	Rat
631828	Alc5	Alcohol consumption QTL 5	2.4		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	10	5144027	17245662	Rat
634327	Hc4	Hypercalciuria QTL 4	2.4		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	10	1	38328221	Rat
2313095	Bss62	Bone structure and strength QTL 62	1.5	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	5387014	50387014	Rat
631660	Hcar1	Hepatocarcinoma resistance QTL 1	3.4	0.0001	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	10	6154182	15990232	Rat
1576304	Schws7	Schwannoma susceptibility QTL 7		0.0115	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	4765527	19816042	Rat
7411611	Foco17	Food consumption QTL 17	18.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	1	42315980	Rat
2303118	Mamtr7	Mammary tumor resistance QTL 7		0.003	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	10	9658275	104670812	Rat
9590268	Scort13	Serum corticosterone level QTL 13	3.26	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	11474010	56474010	Rat
2313104	Bss61	Bone structure and strength QTL 61	0.9	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	10	5387014	50387014	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6357896	96121100	Rat
9590310	Scort19	Serum corticosterone level QTL 19	6.3	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	11474010	56474010	Rat

RH127604

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	69,702,700 - 69,702,904 (+)	MAPPER	mRatBN7.2
mRatBN7.2	10	14,279,208 - 14,279,412 (-)	MAPPER	mRatBN7.2
mRatBN7.2	10	14,279,208 - 14,279,412 (+)	MAPPER	mRatBN7.2
mRatBN7.2	10	69,702,700 - 69,702,904 (-)	MAPPER	mRatBN7.2
Rnor_6.0	10	72,148,529 - 72,148,732	NCBI	Rnor6.0
Rnor_6.0	10	14,620,070 - 14,620,273	NCBI	Rnor6.0
Rnor_5.0	10	14,437,660 - 14,437,863	UniSTS	Rnor5.0
Rnor_5.0	10	72,055,388 - 72,055,591	UniSTS	Rnor5.0
RGSC_v3.4	10	14,510,002 - 14,510,205	UniSTS	RGSC3.4
RGSC_v3.4	10	73,106,012 - 73,106,215	UniSTS	RGSC3.4
Celera	10	68,630,602 - 68,630,805	UniSTS
Celera	10	13,951,622 - 13,951,825	UniSTS
Cytogenetic Map	10	q26	UniSTS
Cytogenetic Map	10	q12	UniSTS

BE107288

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	14,284,780 - 14,284,934 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	14,625,642 - 14,625,795	NCBI	Rnor6.0
Rnor_5.0	10	14,443,232 - 14,443,385	UniSTS	Rnor5.0
RGSC_v3.4	10	14,515,574 - 14,515,727	UniSTS	RGSC3.4
Celera	10	13,957,194 - 13,957,347	UniSTS
RH 3.4 Map	10	170.6	UniSTS
Cytogenetic Map	10	q12	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001428972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_013050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC094421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC086324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC086592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ229169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U54632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000024406 ⟹ ENSRNOP00000024406

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	69,701,618 - 69,702,443 (+)	Ensembl
Rnor_6.0 Ensembl	10	14,620,531 - 14,630,151 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000090085 ⟹ ENSRNOP00000075659

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	14,279,155 - 14,295,136 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104064 ⟹ ENSRNOP00000085922

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	14,277,749 - 14,293,782 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111980 ⟹ ENSRNOP00000091713

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	14,277,749 - 14,294,101 (-)	Ensembl

RefSeq Acc Id:

NM_013050 ⟹ NP_037182

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	14,783,651 - 14,798,254 (-)	NCBI
mRatBN7.2	10	14,279,155 - 14,293,759 (-)	NCBI
Rnor_6.0	10	14,620,016 - 14,634,619 (-)	NCBI
Rnor_5.0	10	14,436,200 - 14,456,889 (-)	NCBI
RGSC_v3.4	10	14,509,948 - 14,524,551 (-)	RGD
Celera	10	13,951,568 - 13,966,171 (-)	RGD

Sequence:

show sequence

AGGGGAAGTCCCGAGACAAAGGAGCGCCGCCGCCTCTGCCGCCGCGACGGTCCGGGCCGCGGTCGCCCAGGGACTTTGAATATGTCGGGGATTGCCCTCAGCCGACTTGCGCAGGAGAGGAAAGCCTG
GAGGAAGGACCACCCTTTTGGCTTTGTGGCTGTCCCAACAAAGAACCCTGATGGCACGATGAACCTGATGAACTGGGAGTGTGCTATCCCTGGAAAGAAGGGGACTCCGTGGGAAGGAGGCTTGTTCA
AGCTACGGATGCTTTTCAAAGATGACTATCCGTCCTCACCACCAAAATGTAAATTTGAGCCACCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACAAG
GACTGGCGGCCAGCTATTACGATCAAACAGATCTTATTAGGAATACAAGAACTTCTAAATGAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCCTATACAATTTACTGCCAAAACAGAGTGGAATA
TGAGAAAAGGGTTCGAGCACAAGCGAAGAAGTTTGCCCCCTCATAAGCAGCGGCCCGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCC
GTACAGTTACTAGTAGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTTTTGATTATTGAGTAAAACTTGCTTTTATTTTAATATTGATGTCAGTA
TTTCAACTGCTGTAAAATGATAAACTTTTGTACTTGGTAAGCCCTAGGAGCTAGTTTCTTCTCGTCCGCTCGGATCGAGGCATGTTCCCCACTGTTCAGAGCTCTGGCCTCCAGCTGGCTGTATGACA
GAACCACACTGTCCCTCCTTCCTTCCCTACCCTCGTCCTTCTCAGAAACCTGGGCTGTTGCTTATGAGCCTCAGATCCAAAGTTGGCCAGCATCTCCATTCTGCACCACTTCCTTTGTGTTTATATGG
CGTTTTGTCTGTGTTGCTGTTTAGAGTAAATAAACTGTTTATATAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006245919 ⟹ XP_006245981

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	14,782,245 - 14,797,531 (-)	NCBI
mRatBN7.2	10	14,277,749 - 14,293,627 (-)	NCBI
Rnor_6.0	10	14,618,615 - 14,634,501 (-)	NCBI
Rnor_5.0	10	14,436,200 - 14,456,889 (-)	NCBI

Sequence:

show sequence

CGCCGTTCCCAGTGAGCTTCCGGGAGGCGCCGAGCGGAGCCACAGCGGCCTCCTCTCGCTCGCGGCCTCCTCCCGCCTCCGAGTCTCGGCCTTCGGGGCAATAGGGCCCAGCCGCTGTGCCATGGGCG
AATGCAGGGTTGGGAACACGGCCCACTACCCCCCTACTCTTGGCGTACTGAGTTCCGCCGACCCCACAACAGATAATCTGAGCTTCCCAGTAGCTCCTAGACACATTCTGGGCGGTGCTGGGCTCCGT
AGTTAGGCGAGCGGGAGTGCAGGAAGGCCGTGGGCACTGGGCCGTGTCGCGGCCTGTAAGCACCCGGAGTCACAGCAGAAGGCTTGGCTTACTTCGTTCGTTGCTGAGACGCTAGGCTTGTAGTTTGG
GTTTTTGTGGGGGTCTTGTGCATGTTCTCTGCCCCACTGTTCTTTTTTCTTAAGGAACCGTTTTAGTGGATGAATTACCTCTCTGCATAGCAGAAAACGGGTATCAAAGGGGAATTTGTTTTGATTCT
AAAGGTTTTCAGGCTGTGAGTGATTGCAGTCCTGCCCTCCTCTGGCTGTCTCTGCCACTAGAAACTCAAGAAACGGCGTGGTATACTTAGTGAAGGATCCTTAGGGCCTAGAGTGTGCATTCGAGTAG
AAGAGGCCGCTTAGCCTTATCCAAGCCAGCCTTAGTGGCCGGTACCCACGTTTCCTCTGCCGAGGTGGGCGGAGATAAGCAACCTTGCACAGGTTCTCTGACCGGGACTTTGAATATGTCGGGGATTG
CCCTCAGCCGACTTGCGCAGGAGAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTGGCTGTCCCAACAAAGAACCCTGATGGCACGATGAACCTGATGAACTGGGAGTGTGCTATCCCTGGA
AAGAAGGGGACTCCGTGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTTCAAAGATGACTATCCGTCCTCACCACCAAAATGTAAATTTGAGCCACCACTGTTTCATCCAAACGTGTATCCTTCTGG
CACAGTGTGCCTGTCCATCCTGGAGGAAGACAAGGACTGGCGGCCAGCTATTACGATCAAACAGATCTTATTAGGAATACAAGAACTTCTAAATGAACCAAATATTCAAGACCCAGCTCAAGCAGAGG
CCTATACAATTTACTGCCAAAACAGAGTGGAATATGAGAAAAGGGTTCGAGCACAAGCGAAGAAGTTTGCCCCCTCATAAGCAGCGGCCCGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAAC
TTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTAGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTTTTGATTATTGAGT
AAAACTTGCTTTTATTTTAATATTGATGTCAGTATTTCAACTGCTGTAAAATGATAAACTTTTGTACTTGGTAAGCCCCTAGGAGCTAGTTTCTTCTCGTCGCGCTCGGATGCAGGCATGCTTCCCAC
TGTTCAGAGCTCTGGCCTCCAGCTGGCTGTATGACAGAACCACACTGTCCCTCCTTCCTTCCCTACCCTCGTCCTTCTCAGAAACCTGGGCTGTTGCTTATGAGCCTCAGATCCAAAGTTGGCCAGCA
TCTCCATTCTGCACCACTTCCTTTGTGTTTATATGGCGTTTTGTCTGTGTTGCTGTTTAGAGTAAATAAACTGTTTATATAAAGGTTTTTGTTGCATTATCATCATTAAAATGTGAGGAGGTACCTCA
GTATGTCTGGCCCTCCTCACGTGGCTGCAGCCCTTGCCAGGCACCAAGGCTGAGCCCCAGGACCAGCACCTATCACAGCTTCTGCTAGGGATATGCCCAGGCCCCATGCAGCTCCATGTTCATCTGGT
TCTTTGTAAATAGGACTGTGTACAGAGATGTGTTCTGTTCTCCCCACCTGGGTCTTTGGGCCTTAAGGTACCAGGCAGCATTGAGGTCCTCATGAAGTTGGAATCCGCATCCAGCCTTCGTAAGCCCA
GCAAGGTGAAAGACTGGCTGATCCAGACCAAGGCTGAGGCCTGGTGAGAGCCCAGGACAAACTGGCCTGCACTGATCTCCCTGCCTGTTAGCTGTACAGTGGGCCTCACTGTGGCCTGGATGCTAGCT
TCAGGCCTTTTGATGCCCTACCCTTGCACCTGGAAGAGGCAACCCTGCCACCGGCCCAGGCAAACAGCGGGTCCTTCCTCTAGAGCACCTGAGCACACAGTTCCGCACCTCCTGGCCTGCATTCAACC
TTACCCTACAGCCCAGGAGACCAGCCTGGTGTGGCCTCGGCACAGGATGACCTCAGGTACTACCGTCCACATACTCTGCTTGCTGAAGCTGGTCTGGGTGAAGCTGCTCTTGATGGTGGCCCACCTGG
GCTGGGCTGGGTCTATGATCTTGGGGCTTACAGAGCATAGGGAAGTGCAGTGGACATAGGCAGTGATCAGTCTCCATCAGACTTGGTCCTGAGGCCCCCTGGAAGAACCTTGACATGGGAACCAGGCA
CCAGTGGCTCAAGTTCAGGGACCAATCAAGGGGTGGCCAGGTCTGTAGTCAAGAGTCTTTGCTCTGGAATTGAGGGAACTTGTGCTCACACAGCTGGTGGCACCGGTATGGACTGGGTTGCCAGTGCC
TTGTGGGTATGTTTGGCCACGAGTATAGTCAGGAGCTGAGTTTGGATGGACAGTTGCAGCTAATGGCACAGGGCCTCACCCGGGGAGTTCAGGCTGGTGTGTGTGTGTAGCCTGCTCTCAGAATGTCT
TATTTTGTAACAACTGACTACATTTAGTAATAGGTACACATGTATATGGTTAATATATGGAAATTCAATATATTTTATAGTTAAAGTATTCTAAAGTAACTGATGTTTCTAGCAAACTGTAGTGACCC
CAGCTATGAAGTGTTCCTTTTGTACCACAGTCCTTGGATTACCAGAGATGTGAATCTTGTAACATGAGAATGTGGTCTGTGACCATCCTGTGTTAAGATGGTGGGGAGGAGGGTATCCCAGCATGAAG
CCTCATTGGTAAGGAATTGTGGGCAACAGATTAACCACTGTATCTACAAATCCTCTAATTAAAACATTTCCACAAA

hide sequence

RefSeq Acc Id:

XM_006245920 ⟹ XP_006245982

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	14,782,245 - 14,799,168 (-)	NCBI
mRatBN7.2	10	14,277,749 - 14,294,681 (-)	NCBI
Rnor_6.0	10	14,618,615 - 14,635,541 (-)	NCBI
Rnor_5.0	10	14,436,200 - 14,456,889 (-)	NCBI

Sequence:

show sequence

AAGTACCCGTCCCGTCGGTGAGTCGGTGAGGAAGCATCCGAGCACCGAGCTGGGTTGCAGAGGACTAGCGGAGGAAACTGGACTAGGCCACGGAGTGACAACAGCGTGTCCAGTGGTGCCAACAGAAG
CCGCGCAGGGGTTTCAGGGACTTTGAATATGTCGGGGATTGCCCTCAGCCGACTTGCGCAGGAGAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTGGCTGTCCCAACAAAGAACCCTGATG
GCACGATGAACCTGATGAACTGGGAGTGTGCTATCCCTGGAAAGAAGGGGACTCCGTGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTTCAAAGATGACTATCCGTCCTCACCACCAAAATGTAAA
TTTGAGCCACCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACAAGGACTGGCGGCCAGCTATTACGATCAAACAGATCTTATTAGGAATACAAGAACT
TCTAAATGAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCCTATACAATTTACTGCCAAAACAGAGTGGAATATGAGAAAAGGGTTCGAGCACAAGCGAAGAAGTTTGCCCCCTCATAAGCAGCGG
CCCGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTAGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCG
CCACTGGCATATTCAGTCTTTTGTATTTTTGATTATTGAGTAAAACTTGCTTTTATTTTAATATTGATGTCAGTATTTCAACTGCTGTAAAATGATAAACTTTTGTACTTGGTAAGCCCCTAGGAGCT
AGTTTCTTCTCGTCGCGCTCGGATGCAGGCATGCTTCCCACTGTTCAGAGCTCTGGCCTCCAGCTGGCTGTATGACAGAACCACACTGTCCCTCCTTCCTTCCCTACCCTCGTCCTTCTCAGAAACCT
GGGCTGTTGCTTATGAGCCTCAGATCCAAAGTTGGCCAGCATCTCCATTCTGCACCACTTCCTTTGTGTTTATATGGCGTTTTGTCTGTGTTGCTGTTTAGAGTAAATAAACTGTTTATATAAAGGTT
TTTGTTGCATTATCATCATTAAAATGTGAGGAGGTACCTCAGTATGTCTGGCCCTCCTCACGTGGCTGCAGCCCTTGCCAGGCACCAAGGCTGAGCCCCAGGACCAGCACCTATCACAGCTTCTGCTA
GGGATATGCCCAGGCCCCATGCAGCTCCATGTTCATCTGGTTCTTTGTAAATAGGACTGTGTACAGAGATGTGTTCTGTTCTCCCCACCTGGGTCTTTGGGCCTTAAGGTACCAGGCAGCATTGAGGT
CCTCATGAAGTTGGAATCCGCATCCAGCCTTCGTAAGCCCAGCAAGGTGAAAGACTGGCTGATCCAGACCAAGGCTGAGGCCTGGTGAGAGCCCAGGACAAACTGGCCTGCACTGATCTCCCTGCCTG
TTAGCTGTACAGTGGGCCTCACTGTGGCCTGGATGCTAGCTTCAGGCCTTTTGATGCCCTACCCTTGCACCTGGAAGAGGCAACCCTGCCACCGGCCCAGGCAAACAGCGGGTCCTTCCTCTAGAGCA
CCTGAGCACACAGTTCCGCACCTCCTGGCCTGCATTCAACCTTACCCTACAGCCCAGGAGACCAGCCTGGTGTGGCCTCGGCACAGGATGACCTCAGGTACTACCGTCCACATACTCTGCTTGCTGAA
GCTGGTCTGGGTGAAGCTGCTCTTGATGGTGGCCCACCTGGGCTGGGCTGGGTCTATGATCTTGGGGCTTACAGAGCATAGGGAAGTGCAGTGGACATAGGCAGTGATCAGTCTCCATCAGACTTGGT
CCTGAGGCCCCCTGGAAGAACCTTGACATGGGAACCAGGCACCAGTGGCTCAAGTTCAGGGACCAATCAAGGGGTGGCCAGGTCTGTAGTCAAGAGTCTTTGCTCTGGAATTGAGGGAACTTGTGCTC
ACACAGCTGGTGGCACCGGTATGGACTGGGTTGCCAGTGCCTTGTGGGTATGTTTGGCCACGAGTATAGTCAGGAGCTGAGTTTGGATGGACAGTTGCAGCTAATGGCACAGGGCCTCACCCGGGGAG
TTCAGGCTGGTGTGTGTGTGTAGCCTGCTCTCAGAATGTCTTATTTTGTAACAACTGACTACATTTAGTAATAGGTACACATGTATATGGTTAATATATGGAAATTCAATATATTTTATAGTTAAAGT
ATTCTAAAGTAACTGATGTTTCTAGCAAACTGTAGTGACCCCAGCTATGAAGTGTTCCTTTTGTACCACAGTCCTTGGATTACCAGAGATGTGAATCTTGTAACATGAGAATGTGGTCTGTGACCATC
CTGTGTTAAGATGGTGGGGAGGAGGGTATCCCAGCATGAAGCCTCATTGGTAAGGAATTGTGGGCAACAGATTAACCACTGTATCTACAAATCCTCTAATTAAAACATTTCCACAAA

hide sequence

RefSeq Acc Id:

XM_008767549 ⟹ XP_008765771

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	14,782,245 - 14,802,529 (-)	NCBI
mRatBN7.2	10	14,277,749 - 14,294,678 (-)	NCBI
Rnor_6.0	10	14,618,615 - 14,635,539 (-)	NCBI

Sequence:

show sequence

GTACCCGTCCCGTCGGTGAGTCGGTGAGGAAGCATCCGAGCACCGAGCTGGGTTGCAGAGGACTAGCGGAGGAAACTGGACTAGGCCACGGAGTGACAACAGCGTGTCCAGTGGTGCCAACAGAAGCC
GCGCAGGGGTTTCAGGTGGAACGAGGGACTTTGAATATGTCGGGGATTGCCCTCAGCCGACTTGCGCAGGAGAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTGGCTGTCCCAACAAAGAA
CCCTGATGGCACGATGAACCTGATGAACTGGGAGTGTGCTATCCCTGGAAAGAAGGGGACTCCGTGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTTCAAAGATGACTATCCGTCCTCACCACCAA
AATGTAAATTTGAGCCACCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACAAGGACTGGCGGCCAGCTATTACGATCAAACAGATCTTATTAGGAATA
CAAGAACTTCTAAATGAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCCTATACAATTTACTGCCAAAACAGAGTGGAATATGAGAAAAGGGTTCGAGCACAAGCGAAGAAGTTTGCCCCCTCATA
AGCAGCGGCCCGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTAGCCTGGGAGGGTTGAGCGGGCGCCATTTTC
CATTTCCGCCACTGGCATATTCAGTCTTTTGTATTTTTGATTATTGAGTAAAACTTGCTTTTATTTTAATATTGATGTCAGTATTTCAACTGCTGTAAAATGATAAACTTTTGTACTTGGTAAGCCCC
TAGGAGCTAGTTTCTTCTCGTCGCGCTCGGATGCAGGCATGCTTCCCACTGTTCAGAGCTCTGGCCTCCAGCTGGCTGTATGACAGAACCACACTGTCCCTCCTTCCTTCCCTACCCTCGTCCTTCTC
AGAAACCTGGGCTGTTGCTTATGAGCCTCAGATCCAAAGTTGGCCAGCATCTCCATTCTGCACCACTTCCTTTGTGTTTATATGGCGTTTTGTCTGTGTTGCTGTTTAGAGTAAATAAACTGTTTATA
TAAAGGTTTTTGTTGCATTATCATCATTAAAATGTGAGGAGGTACCTCAGTATGTCTGGCCCTCCTCACGTGGCTGCAGCCCTTGCCAGGCACCAAGGCTGAGCCCCAGGACCAGCACCTATCACAGC
TTCTGCTAGGGATATGCCCAGGCCCCATGCAGCTCCATGTTCATCTGGTTCTTTGTAAATAGGACTGTGTACAGAGATGTGTTCTGTTCTCCCCACCTGGGTCTTTGGGCCTTAAGGTACCAGGCAGC
ATTGAGGTCCTCATGAAGTTGGAATCCGCATCCAGCCTTCGTAAGCCCAGCAAGGTGAAAGACTGGCTGATCCAGACCAAGGCTGAGGCCTGGTGAGAGCCCAGGACAAACTGGCCTGCACTGATCTC
CCTGCCTGTTAGCTGTACAGTGGGCCTCACTGTGGCCTGGATGCTAGCTTCAGGCCTTTTGATGCCCTACCCTTGCACCTGGAAGAGGCAACCCTGCCACCGGCCCAGGCAAACAGCGGGTCCTTCCT
CTAGAGCACCTGAGCACACAGTTCCGCACCTCCTGGCCTGCATTCAACCTTACCCTACAGCCCAGGAGACCAGCCTGGTGTGGCCTCGGCACAGGATGACCTCAGGTACTACCGTCCACATACTCTGC
TTGCTGAAGCTGGTCTGGGTGAAGCTGCTCTTGATGGTGGCCCACCTGGGCTGGGCTGGGTCTATGATCTTGGGGCTTACAGAGCATAGGGAAGTGCAGTGGACATAGGCAGTGATCAGTCTCCATCA
GACTTGGTCCTGAGGCCCCCTGGAAGAACCTTGACATGGGAACCAGGCACCAGTGGCTCAAGTTCAGGGACCAATCAAGGGGTGGCCAGGTCTGTAGTCAAGAGTCTTTGCTCTGGAATTGAGGGAAC
TTGTGCTCACACAGCTGGTGGCACCGGTATGGACTGGGTTGCCAGTGCCTTGTGGGTATGTTTGGCCACGAGTATAGTCAGGAGCTGAGTTTGGATGGACAGTTGCAGCTAATGGCACAGGGCCTCAC
CCGGGGAGTTCAGGCTGGTGTGTGTGTGTAGCCTGCTCTCAGAATGTCTTATTTTGTAACAACTGACTACATTTAGTAATAGGTACACATGTATATGGTTAATATATGGAAATTCAATATATTTTATA
GTTAAAGTATTCTAAAGTAACTGATGTTTCTAGCAAACTGTAGTGACCCCAGCTATGAAGTGTTCCTTTTGTACCACAGTCCTTGGATTACCAGAGATGTGAATCTTGTAACATGAGAATGTGGTCTG
TGACCATCCTGTGTTAAGATGGTGGGGAGGAGGGTATCCCAGCATGAAGCCTCATTGGTAAGGAATTGTGGGCAACAGATTAACCACTGTATCTACAAATCCTCTAATTAAAACATTTCCACAAA

hide sequence

RefSeq Acc Id:

XM_017597044 ⟹ XP_017452533

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	14,782,245 - 14,798,993 (-)	NCBI
mRatBN7.2	10	14,277,749 - 14,294,214 (-)	NCBI
Rnor_6.0	10	14,618,615 - 14,635,243 (-)	NCBI

Sequence:

show sequence

TTTTGTTTGCGTTTGGTCCTTTGTATTAGGTCCGTTCATTGGGTAGGTTCGAGATTTACCCCGCCCAAATTCCAGGGCTAGCCAATTACAGAAAATGTCTCAACGCCCCGTATTCCGGGGATCGTCAC
CGTACTGCGACGATTCCCAGGATGTTTAGGCCTCAGTGATCTTTGCTCCCGGGACTCGGGCCTTGAGCCCAAGGATACCTCCAGAGCCTGTGCCTGGGACTTTGAATATGTCGGGGATTGCCCTCAGC
CGACTTGCGCAGGAGAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTGGCTGTCCCAACAAAGAACCCTGATGGCACGATGAACCTGATGAACTGGGAGTGTGCTATCCCTGGAAAGAAGGG
GACTCCGTGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTTCAAAGATGACTATCCGTCCTCACCACCAAAATGTAAATTTGAGCCACCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGT
GCCTGTCCATCCTGGAGGAAGACAAGGACTGGCGGCCAGCTATTACGATCAAACAGATCTTATTAGGAATACAAGAACTTCTAAATGAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCCTATACA
ATTTACTGCCAAAACAGAGTGGAATATGAGAAAAGGGTTCGAGCACAAGCGAAGAAGTTTGCCCCCTCATAAGCAGCGGCCCGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTAC
AACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTAGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTTTTGATTATTGAGTAAAACTTG
CTTTTATTTTAATATTGATGTCAGTATTTCAACTGCTGTAAAATGATAAACTTTTGTACTTGGTAAGCCCCTAGGAGCTAGTTTCTTCTCGTCGCGCTCGGATGCAGGCATGCTTCCCACTGTTCAGA
GCTCTGGCCTCCAGCTGGCTGTATGACAGAACCACACTGTCCCTCCTTCCTTCCCTACCCTCGTCCTTCTCAGAAACCTGGGCTGTTGCTTATGAGCCTCAGATCCAAAGTTGGCCAGCATCTCCATT
CTGCACCACTTCCTTTGTGTTTATATGGCGTTTTGTCTGTGTTGCTGTTTAGAGTAAATAAACTGTTTATATAAAGGTTTTTGTTGCATTATCATCATTAAAATGTGAGGAGGTACCTCAGTATGTCT
GGCCCTCCTCACGTGGCTGCAGCCCTTGCCAGGCACCAAGGCTGAGCCCCAGGACCAGCACCTATCACAGCTTCTGCTAGGGATATGCCCAGGCCCCATGCAGCTCCATGTTCATCTGGTTCTTTGTA
AATAGGACTGTGTACAGAGATGTGTTCTGTTCTCCCCACCTGGGTCTTTGGGCCTTAAGGTACCAGGCAGCATTGAGGTCCTCATGAAGTTGGAATCCGCATCCAGCCTTCGTAAGCCCAGCAAGGTG
AAAGACTGGCTGATCCAGACCAAGGCTGAGGCCTGGTGAGAGCCCAGGACAAACTGGCCTGCACTGATCTCCCTGCCTGTTAGCTGTACAGTGGGCCTCACTGTGGCCTGGATGCTAGCTTCAGGCCT
TTTGATGCCCTACCCTTGCACCTGGAAGAGGCAACCCTGCCACCGGCCCAGGCAAACAGCGGGTCCTTCCTCTAGAGCACCTGAGCACACAGTTCCGCACCTCCTGGCCTGCATTCAACCTTACCCTA
CAGCCCAGGAGACCAGCCTGGTGTGGCCTCGGCACAGGATGACCTCAGGTACTACCGTCCACATACTCTGCTTGCTGAAGCTGGTCTGGGTGAAGCTGCTCTTGATGGTGGCCCACCTGGGCTGGGCT
GGGTCTATGATCTTGGGGCTTACAGAGCATAGGGAAGTGCAGTGGACATAGGCAGTGATCAGTCTCCATCAGACTTGGTCCTGAGGCCCCCTGGAAGAACCTTGACATGGGAACCAGGCACCAGTGGC
TCAAGTTCAGGGACCAATCAAGGGGTGGCCAGGTCTGTAGTCAAGAGTCTTTGCTCTGGAATTGAGGGAACTTGTGCTCACACAGCTGGTGGCACCGGTATGGACTGGGTTGCCAGTGCCTTGTGGGT
ATGTTTGGCCACGAGTATAGTCAGGAGCTGAGTTTGGATGGACAGTTGCAGCTAATGGCACAGGGCCTCACCCGGGGAGTTCAGGCTGGTGTGTGTGTGTAGCCTGCTCTCAGAATGTCTTATTTTGT
AACAACTGACTACATTTAGTAATAGGTACACATGTATATGGTTAATATATGGAAATTCAATATATTTTATAGTTAAAGTATTCTAAAGTAACTGATGTTTCTAGCAAACTGTAGTGACCCCAGCTATG
AAGTGTTCCTTTTGTACCACAGTCCTTGGATTACCAGAGATGTGAATCTTGTAACATGAGAATGTGGTCTGTGACCATCCTGTGTTAAGATGGTGGGGAGGAGGGTATCCCAGCATGAAGCCTCATTG
GTAAGGAATTGTGGGCAACAGATTAACCACTGTATCTACAAATCCTCTAATTAAAACATTTCCACAAA

hide sequence

RefSeq Acc Id:

XM_063268474 ⟹ XP_063124544

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	14,782,245 - 14,802,831 (-)	NCBI

RefSeq Acc Id:

XM_063268476 ⟹ XP_063124546

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	14,782,245 - 14,802,911 (-)	NCBI

RefSeq Acc Id:

XM_063268477 ⟹ XP_063124547

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	14,782,245 - 14,798,318 (-)	NCBI


Protein RefSeqs	NP_001415901	(Get FASTA)	NCBI Sequence Viewer
	NP_001415902	(Get FASTA)	NCBI Sequence Viewer
	NP_001415903	(Get FASTA)	NCBI Sequence Viewer
	NP_001415904	(Get FASTA)	NCBI Sequence Viewer
	NP_001415905	(Get FASTA)	NCBI Sequence Viewer
	NP_037182	(Get FASTA)	NCBI Sequence Viewer
	XP_006245981	(Get FASTA)	NCBI Sequence Viewer
	XP_006245982	(Get FASTA)	NCBI Sequence Viewer
	XP_008765771	(Get FASTA)	NCBI Sequence Viewer
	XP_017452533	(Get FASTA)	NCBI Sequence Viewer
	XP_063124544	(Get FASTA)	NCBI Sequence Viewer
	XP_063124546	(Get FASTA)	NCBI Sequence Viewer
	XP_063124547	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC98704	(Get FASTA)	NCBI Sequence Viewer
	AAH86324	(Get FASTA)	NCBI Sequence Viewer
	AAH86592	(Get FASTA)	NCBI Sequence Viewer
	EDM03919	(Get FASTA)	NCBI Sequence Viewer
	EDM03920	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000075659
	ENSRNOP00000085922.1
	ENSRNOP00000101344
GenBank Protein	P63281	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_037182 ⟸ NM_013050
- UniProtKB:	P63281 (UniProtKB/Swiss-Prot), A6HD16 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDP AQAEAYTIYCQNRVEYEKRVRAQAKKFAPS hide sequence

RefSeq Acc Id:	XP_006245982 ⟸ XM_006245920
- Peptide Label:	isoform X4
- Sequence:	show sequence MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLF KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS hide sequence

RefSeq Acc Id:	XP_006245981 ⟸ XM_006245919
- Peptide Label:	isoform X4
- Sequence:	show sequence MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDP AQAEAYTIYCQNRVEYEKRVRAQAKKFAPS hide sequence

RefSeq Acc Id:	XP_008765771 ⟸ XM_008767549
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2KB55 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLF KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS hide sequence

RefSeq Acc Id:	XP_017452533 ⟸ XM_017597044
- Peptide Label:	isoform X4
- Sequence:	show sequence MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDP AQAEAYTIYCQNRVEYEKRVRAQAKKFAPS hide sequence

Protein Domains

UBC core

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P63281-F1-model_v2	AlphaFold	P63281	1-158	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-25792	BioCyc
Ensembl Genes	ENSRNOG00000017907	Ensembl
	ENSRNOG00000066579	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000090085	ENTREZGENE
	ENSRNOT00000104064.1	UniProtKB/Swiss-Prot
	ENSRNOT00000154507	ENTREZGENE
Gene3D-CATH	3.10.110.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7305067	IMAGE-MGC_LOAD
	IMAGE:7310403	IMAGE-MGC_LOAD
InterPro	Ub_conjugating_enzyme	UniProtKB/Swiss-Prot
	UBQ-conjugat_E2	UniProtKB/Swiss-Prot
	UBQ-conjugating_AS	UniProtKB/Swiss-Prot
	UBQ-conjugating_enzyme/RWD	UniProtKB/Swiss-Prot
KEGG Report	rno:25573	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:105476	IMAGE-MGC_LOAD
	MGC:105477	IMAGE-MGC_LOAD
NCBI Gene	25573	ENTREZGENE
PANTHER	UBIQUITIN-CONJUGATING ENZYME E2	UniProtKB/Swiss-Prot
Pfam	UQ_con	UniProtKB/Swiss-Prot
PhenoGen	Ube2i	PhenoGen
PROSITE	UBIQUITIN_CONJUGAT_1	UniProtKB/Swiss-Prot
	UBIQUITIN_CONJUGAT_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000017907	RatGTEx
	ENSRNOG00000066579	RatGTEx
SMART	UBCc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF54495	UniProtKB/Swiss-Prot
TIGR	TC228339
UniProt	A0A0G2KB55	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AG56_RAT	UniProtKB/TrEMBL
	A0A8L2QCN1_RAT	UniProtKB/TrEMBL
	A6HD16	ENTREZGENE, UniProtKB/TrEMBL
	P63281	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	P50550	UniProtKB/Swiss-Prot
	Q15698	UniProtKB/Swiss-Prot
	Q86VB3	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-08-01	Ube2i	ubiquitin-conjugating enzyme E2I	Ube2i	ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-05-25	Ube2i	ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)	Ube2i	ubiquitin-conjugating enzyme E2I	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2002-06-10	Ube2i	Ubiquitin conjugating enzyme E2I			Symbol and Name status set to approved	70586	APPROVED

Note Type	Note	Reference
gene_physical_interaction	protein binds helix-loop-helix protein E47 specificaly at a 54 aa region (477-530)	730030

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)