Snap91 (synaptosome associated protein 91) - Rat Genome Database

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Gene: Snap91 (synaptosome associated protein 91) Chinchilla lanigera
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Symbol: Snap91
Name: synaptosome associated protein 91
RGD ID: 8821333
Description: ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); clathrin adaptor activity (ortholog); clathrin binding (ortholog); INVOLVED IN axonogenesis (ortholog); chemical synaptic transmission (ortholog); clathrin coat assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Alzheimer's disease (ortholog); immunodeficiency 23 (ortholog); middle cerebral artery infarction (ortholog); FOUND IN axon terminus (ortholog); clathrin-coated vesicle (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: clathrin coat assembly protein AP180; synaptosomal-associated protein, 91kDa
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541111,175,525 - 11,300,950 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541111,175,587 - 11,301,145 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Snap91
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541111,175,525 - 11,300,950 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541111,175,587 - 11,301,145 (-)NCBIChiLan1.0ChiLan1.0
SNAP91
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38683,552,885 - 83,709,393 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl683,552,880 - 83,709,691 (-)EnsemblGRCh38hg38GRCh38
GRCh37684,262,604 - 84,419,112 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36684,319,332 - 84,475,495 (-)NCBINCBI36Build 36hg18NCBI36
Build 34684,319,331 - 84,475,495NCBI
Celera684,695,893 - 84,852,438 (-)NCBICelera
Cytogenetic Map6q14.2NCBI
HuRef681,492,256 - 81,648,799 (-)NCBIHuRef
CHM1_1684,360,208 - 84,516,740 (-)NCBICHM1_1
T2T-CHM13v2.0684,776,120 - 84,932,636 (-)NCBIT2T-CHM13v2.0
Snap91
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39986,647,976 - 86,762,766 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl986,647,976 - 86,762,707 (-)EnsemblGRCm39 Ensembl
GRCm38986,765,923 - 86,880,734 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl986,765,923 - 86,880,654 (-)EnsemblGRCm38mm10GRCm38
MGSCv37986,659,239 - 86,775,207 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36986,562,350 - 86,678,320 (-)NCBIMGSCv36mm8
Celera983,843,031 - 83,967,649 (-)NCBICelera
Cytogenetic Map9E3.1NCBI
cM Map946.58NCBI
Snap91
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8896,618,039 - 96,732,763 (-)NCBIGRCr8
mRatBN7.2887,738,056 - 87,852,690 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl887,738,824 - 87,852,367 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx893,418,568 - 93,525,116 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0891,617,774 - 91,724,331 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0889,459,489 - 89,566,103 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0894,447,558 - 94,564,772 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl894,447,550 - 94,564,525 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0893,958,152 - 94,074,269 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4892,033,425 - 92,147,091 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1892,052,879 - 92,166,546 (-)NCBI
Celera887,338,970 - 87,446,775 (-)NCBICelera
Cytogenetic Map8q31NCBI
SNAP91
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25103,646,352 - 103,805,054 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16101,542,959 - 101,701,653 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0681,441,792 - 81,600,505 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1684,717,271 - 84,875,561 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl684,720,850 - 84,874,407 (-)Ensemblpanpan1.1panPan2
SNAP91
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11243,919,925 - 44,058,315 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1243,919,925 - 44,058,616 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1243,734,660 - 43,872,902 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01244,689,016 - 44,828,781 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1244,689,023 - 44,828,948 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11244,027,843 - 44,166,268 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01243,961,559 - 44,100,121 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01244,138,511 - 44,276,836 (-)NCBIUU_Cfam_GSD_1.0
Snap91
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494679,125,757 - 79,248,750 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365107,223,757 - 7,343,742 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365107,222,200 - 7,345,138 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SNAP91
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl182,541,018 - 82,698,633 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1182,540,998 - 82,698,652 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2192,790,018 - 92,949,958 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SNAP91
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1138,221,601 - 8,374,205 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666040184,439,639 - 184,590,396 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Snap91
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479910,915,477 - 11,060,312 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479910,913,834 - 11,060,185 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000015392   ⟹   ENSCLAP00000015232
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541111,175,525 - 11,300,950 (-)Ensembl
Ensembl Acc Id: ENSCLAT00000015393   ⟹   ENSCLAP00000015233
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541111,175,525 - 11,300,950 (-)Ensembl
Ensembl Acc Id: ENSCLAT00000015394   ⟹   ENSCLAP00000015234
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541111,179,062 - 11,299,713 (-)Ensembl
Ensembl Acc Id: ENSCLAT00000015395   ⟹   ENSCLAP00000015235
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541111,179,062 - 11,299,713 (-)Ensembl
Ensembl Acc Id: ENSCLAT00000015396   ⟹   ENSCLAP00000015236
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541111,179,062 - 11,299,713 (-)Ensembl
RefSeq Acc Id: XM_005377690   ⟹   XP_005377747
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541111,175,587 - 11,301,142 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005377691   ⟹   XP_005377748
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541111,175,587 - 11,301,143 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013510912   ⟹   XP_013366366
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541111,175,587 - 11,301,143 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013510914   ⟹   XP_013366368
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541111,175,587 - 11,301,143 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013510915   ⟹   XP_013366369
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541111,175,587 - 11,301,144 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013510916   ⟹   XP_013366370
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541111,175,587 - 11,301,145 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013510917   ⟹   XP_013366371
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541111,175,587 - 11,301,143 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013510918   ⟹   XP_013366372
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541111,175,587 - 11,301,143 (-)NCBI
Sequence:
RefSeq Acc Id: XP_005377747   ⟸   XM_005377690
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VKB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005377748   ⟸   XM_005377691
- Peptide Label: isoform X3
- UniProtKB: A0A8C2VKB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013366370   ⟸   XM_013510916
- Peptide Label: isoform X6
- UniProtKB: A0A8C2VKB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013366369   ⟸   XM_013510915
- Peptide Label: isoform X5
- UniProtKB: A0A8C2VKB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013366372   ⟸   XM_013510918
- Peptide Label: isoform X8
- UniProtKB: A0A8C2VID0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013366366   ⟸   XM_013510912
- Peptide Label: isoform X2
- UniProtKB: A0A8C2VNK3 (UniProtKB/TrEMBL),   A0A8C2VKB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013366368   ⟸   XM_013510914
- Peptide Label: isoform X4
- UniProtKB: A0A8C2VKB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013366371   ⟸   XM_013510917
- Peptide Label: isoform X7
- UniProtKB: A0A8C2VKB4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000015235   ⟸   ENSCLAT00000015395
Ensembl Acc Id: ENSCLAP00000015234   ⟸   ENSCLAT00000015394
Ensembl Acc Id: ENSCLAP00000015236   ⟸   ENSCLAT00000015396
Ensembl Acc Id: ENSCLAP00000015233   ⟸   ENSCLAT00000015393
Ensembl Acc Id: ENSCLAP00000015232   ⟸   ENSCLAT00000015392
Protein Domains
ENTH


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010490 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000015392 ENTREZGENE
  ENSCLAT00000015392.1 UniProtKB/TrEMBL
  ENSCLAT00000015393 ENTREZGENE
  ENSCLAT00000015393.1 UniProtKB/TrEMBL
  ENSCLAT00000015394 ENTREZGENE
  ENSCLAT00000015394.1 UniProtKB/TrEMBL
  ENSCLAT00000015395.1 UniProtKB/TrEMBL
  ENSCLAT00000015396.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.150 UniProtKB/TrEMBL
  1.25.40.90 UniProtKB/TrEMBL
InterPro ANTH_dom UniProtKB/TrEMBL
  ANTH_dom_sf UniProtKB/TrEMBL
  AP180-like UniProtKB/TrEMBL
  ENTH UniProtKB/TrEMBL
  ENTH_VHS UniProtKB/TrEMBL
NCBI Gene Snap91 ENTREZGENE
PANTHER PTHR22951 UniProtKB/TrEMBL
  PTHR22951:SF4 UniProtKB/TrEMBL
Pfam ANTH UniProtKB/TrEMBL
PROSITE ENTH UniProtKB/TrEMBL
SMART ENTH UniProtKB/TrEMBL
Superfamily-SCOP GAT-like domain UniProtKB/TrEMBL
  SSF48464 UniProtKB/TrEMBL
UniProt A0A8C2VID0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2VIK8_CHILA UniProtKB/TrEMBL
  A0A8C2VKB4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2VN38_CHILA UniProtKB/TrEMBL
  A0A8C2VNK3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Snap91  synaptosome associated protein 91    synaptosomal-associated protein, 91kDa  Symbol and/or name change 5135510 APPROVED