Snap91 (synaptosome associated protein 91) - Rat Genome Database

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Gene: Snap91 (synaptosome associated protein 91) Heterocephalus glaber
Analyze
Symbol: Snap91
Name: synaptosome associated protein 91
RGD ID: 18926135
Description: ENCODES a protein that exhibits clathrin adaptor activity (ortholog); inositol hexakisphosphate binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN axonogenesis (ortholog); chemical synaptic transmission (ortholog); establishment or maintenance of cell polarity (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Alzheimer's disease (ortholog); immunodeficiency 23 (ortholog); middle cerebral artery infarction (ortholog); FOUND IN axon terminus (ortholog); clathrin-coated vesicle (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: clathrin coat assembly protein AP180
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479910,915,477 - 11,060,312 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479910,913,834 - 11,060,185 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Snap91
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479910,915,477 - 11,060,312 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479910,913,834 - 11,060,185 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
SNAP91
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38683,552,885 - 83,709,393 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl683,552,880 - 83,709,691 (-)EnsemblGRCh38hg38GRCh38
GRCh37684,262,604 - 84,419,112 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36684,319,332 - 84,475,495 (-)NCBINCBI36Build 36hg18NCBI36
Build 34684,319,331 - 84,475,495NCBI
Celera684,695,893 - 84,852,438 (-)NCBICelera
Cytogenetic Map6q14.2NCBI
HuRef681,492,256 - 81,648,799 (-)NCBIHuRef
CHM1_1684,360,208 - 84,516,740 (-)NCBICHM1_1
T2T-CHM13v2.0684,776,120 - 84,932,636 (-)NCBIT2T-CHM13v2.0
Snap91
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39986,647,976 - 86,762,766 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl986,647,976 - 86,762,707 (-)EnsemblGRCm39 Ensembl
GRCm38986,765,923 - 86,880,734 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl986,765,923 - 86,880,654 (-)EnsemblGRCm38mm10GRCm38
MGSCv37986,659,239 - 86,775,207 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36986,562,350 - 86,678,320 (-)NCBIMGSCv36mm8
Celera983,843,031 - 83,967,649 (-)NCBICelera
Cytogenetic Map9E3.1NCBI
cM Map946.58NCBI
Snap91
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8896,618,039 - 96,732,763 (-)NCBIGRCr8
mRatBN7.2887,738,056 - 87,852,690 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl887,738,824 - 87,852,367 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx893,418,568 - 93,525,116 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0891,617,774 - 91,724,331 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0889,459,489 - 89,566,103 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0894,447,558 - 94,564,772 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl894,447,550 - 94,564,525 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0893,958,152 - 94,074,269 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4892,033,425 - 92,147,091 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1892,052,879 - 92,166,546 (-)NCBI
Celera887,338,970 - 87,446,775 (-)NCBICelera
Cytogenetic Map8q31NCBI
Snap91
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541111,175,525 - 11,300,950 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541111,175,587 - 11,301,145 (-)NCBIChiLan1.0ChiLan1.0
SNAP91
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25103,646,352 - 103,805,054 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16101,542,959 - 101,701,653 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0681,441,792 - 81,600,505 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1684,717,271 - 84,875,561 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl684,720,850 - 84,874,407 (-)Ensemblpanpan1.1panPan2
SNAP91
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11243,919,925 - 44,058,315 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1243,919,925 - 44,058,616 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1243,734,660 - 43,872,902 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01244,689,016 - 44,828,781 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1244,689,023 - 44,828,948 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11244,027,843 - 44,166,268 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01243,961,559 - 44,100,121 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01244,138,511 - 44,276,836 (-)NCBIUU_Cfam_GSD_1.0
Snap91
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494679,125,757 - 79,248,750 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365107,223,757 - 7,343,742 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365107,222,200 - 7,345,138 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SNAP91
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl182,541,018 - 82,698,633 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1182,540,998 - 82,698,652 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2192,790,018 - 92,949,958 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SNAP91
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1138,221,601 - 8,374,205 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666040184,439,639 - 184,590,396 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004860253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004860266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021240705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021240707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021240708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021240709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021240710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021240711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021240712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01069990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01069991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01069992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01069993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01069994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01069995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01069996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01069997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GEBF01004690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSHGLT00000026722   ⟹   ENSHGLP00000026486
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479910,915,477 - 11,060,312 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000026723   ⟹   ENSHGLP00000026487
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479910,915,507 - 11,058,794 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000026724   ⟹   ENSHGLP00000026488
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479910,915,507 - 11,056,744 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000026725   ⟹   ENSHGLP00000026489
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479910,915,507 - 11,056,744 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000026726   ⟹   ENSHGLP00000026490
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479910,915,507 - 11,056,744 (+)Ensembl
RefSeq Acc Id: XM_004860253   ⟹   XP_004860310
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,431 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860254   ⟹   XP_004860311
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,186 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860255   ⟹   XP_004860312
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,014 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860256   ⟹   XP_004860313
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,775 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860257   ⟹   XP_004860314
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,915,220 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860258   ⟹   XP_004860315
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,913,834 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860259   ⟹   XP_004860316
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,431 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860260   ⟹   XP_004860317
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,430 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860261   ⟹   XP_004860318
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,431 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860263   ⟹   XP_004860320
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,429 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_004860266   ⟹   XP_004860323
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,915,477 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_021240705   ⟹   XP_021096364
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,430 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_021240707   ⟹   XP_021096366
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,431 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_021240708   ⟹   XP_021096367
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,431 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_021240709   ⟹   XP_021096368
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,430 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_021240710   ⟹   XP_021096369
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,431 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_021240711   ⟹   XP_021096370
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,430 - 11,060,185 (+)NCBI
RefSeq Acc Id: XM_021240712   ⟹   XP_021096371
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479910,914,431 - 11,060,185 (+)NCBI
RefSeq Acc Id: XP_004860315   ⟸   XM_004860258
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004860312   ⟸   XM_004860255
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004860311   ⟸   XM_004860254
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004860320   ⟸   XM_004860263
- Peptide Label: isoform X12
RefSeq Acc Id: XP_021096370   ⟸   XM_021240711
- Peptide Label: isoform X10
RefSeq Acc Id: XP_004860317   ⟸   XM_004860260
- Peptide Label: isoform X3
- UniProtKB: A0A0P6J5T5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021096364   ⟸   XM_021240705
- Peptide Label: isoform X4
RefSeq Acc Id: XP_021096368   ⟸   XM_021240709
- Peptide Label: isoform X8
RefSeq Acc Id: XP_004860310   ⟸   XM_004860253
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004860318   ⟸   XM_004860261
- Peptide Label: isoform X5
RefSeq Acc Id: XP_021096369   ⟸   XM_021240710
- Peptide Label: isoform X9
RefSeq Acc Id: XP_004860316   ⟸   XM_004860259
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021096367   ⟸   XM_021240708
- Peptide Label: isoform X7
RefSeq Acc Id: XP_021096366   ⟸   XM_021240707
- Peptide Label: isoform X6
RefSeq Acc Id: XP_021096371   ⟸   XM_021240712
- Peptide Label: isoform X11
RefSeq Acc Id: XP_004860313   ⟸   XM_004860256
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004860314   ⟸   XM_004860257
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004860323   ⟸   XM_004860266
- Peptide Label: isoform X13
Ensembl Acc Id: ENSHGLP00000026486   ⟸   ENSHGLT00000026722
Ensembl Acc Id: ENSHGLP00000026490   ⟸   ENSHGLT00000026726
Ensembl Acc Id: ENSHGLP00000026488   ⟸   ENSHGLT00000026724
Ensembl Acc Id: ENSHGLP00000026489   ⟸   ENSHGLT00000026725
Ensembl Acc Id: ENSHGLP00000026487   ⟸   ENSHGLT00000026723


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000018839 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000026722 ENTREZGENE
  ENSHGLT00000026724 ENTREZGENE
  ENSHGLT00000026726 ENTREZGENE
Gene3D-CATH 1.20.58.150 UniProtKB/TrEMBL
  1.25.40.90 UniProtKB/TrEMBL
InterPro ANTH_dom UniProtKB/TrEMBL
  ANTH_dom_sf UniProtKB/TrEMBL
  AP180-like UniProtKB/TrEMBL
  ENTH UniProtKB/TrEMBL
  ENTH_VHS UniProtKB/TrEMBL
NCBI Gene Snap91 ENTREZGENE
PANTHER PTHR22951 UniProtKB/TrEMBL
  PTHR22951:SF4 UniProtKB/TrEMBL
Pfam ANTH UniProtKB/TrEMBL
PROSITE ENTH UniProtKB/TrEMBL
SMART ENTH UniProtKB/TrEMBL
Superfamily-SCOP GAT-like domain UniProtKB/TrEMBL
  SSF48464 UniProtKB/TrEMBL
UniProt A0A0P6J5T5 ENTREZGENE, UniProtKB/TrEMBL