Symbol:
Pomt2
Name:
protein O-mannosyltransferase 2
RGD ID:
8753509
Description:
ENCODES a protein that exhibits mannosyltransferase activity (ortholog); INVOLVED IN basement membrane organization (ortholog); dentate gyrus development (ortholog); positive regulation of protein O-linked glycosylation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2N (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
protein-O-mannosyltransferase 2
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955438 1,179,064 - 1,218,860 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955438 1,179,064 - 1,218,860 (-) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Pomt2 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955438 1,179,064 - 1,218,860 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955438 1,179,064 - 1,218,860 (-) NCBI ChiLan1.0 ChiLan1.0
POMT2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 14 77,274,956 - 77,320,883 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 14 77,274,956 - 77,320,883 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 14 77,741,299 - 77,787,226 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 14 76,811,052 - 76,856,970 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 14 76,811,053 - 76,856,970 NCBI Celera 14 57,779,861 - 57,825,801 (-) NCBI Celera Cytogenetic Map 14 q24.3 NCBI HuRef 14 57,907,710 - 57,953,334 (-) NCBI HuRef CHM1_1 14 77,680,748 - 77,726,684 (-) NCBI CHM1_1 T2T-CHM13v2.0 14 71,484,305 - 71,530,246 (-) NCBI T2T-CHM13v2.0
Pomt2 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 12 87,153,635 - 87,194,742 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 12 87,153,635 - 87,194,742 (-) Ensembl GRCm39 Ensembl GRCm38 12 87,106,861 - 87,147,968 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 12 87,106,861 - 87,147,968 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 12 88,447,816 - 88,488,852 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 12 87,995,969 - 88,037,005 (-) NCBI MGSCv36 mm8 Celera 12 88,571,489 - 88,612,407 (-) NCBI Celera Cytogenetic Map 12 D2 NCBI cM Map 12 41.3 NCBI
Pomt2 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 6 112,486,416 - 112,525,799 (-) NCBI GRCr8 mRatBN7.2 6 106,755,462 - 106,794,849 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 6 106,755,462 - 106,794,849 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 6 106,923,228 - 106,962,583 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 6 107,222,064 - 107,261,421 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 6 106,591,741 - 106,631,092 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 6 111,137,329 - 111,176,991 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 6 111,135,349 - 111,176,918 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 6 120,423,138 - 120,461,156 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 6 111,242,085 - 111,259,180 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 6 104,576,761 - 104,616,136 (-) NCBI Celera Cytogenetic Map 6 q31 NCBI
POMT2 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 15 78,358,485 - 78,404,746 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 14 77,574,989 - 77,621,250 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 14 57,827,841 - 57,874,100 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 14 77,029,625 - 77,075,819 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 14 77,029,625 - 77,075,806 (-) Ensembl panpan1.1 panPan2
POMT2 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 8 50,091,861 - 50,133,388 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 8 50,091,865 - 50,133,442 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 8 49,779,581 - 49,820,925 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 8 50,325,424 - 50,366,778 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 8 50,323,356 - 50,366,973 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 8 49,988,099 - 50,029,629 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 8 50,011,110 - 50,052,484 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 8 50,409,323 - 50,450,667 (-) NCBI UU_Cfam_GSD_1.0
Pomt2 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024408640 25,927,115 - 25,966,356 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936488 6,102,524 - 6,141,875 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936488 6,102,612 - 6,141,842 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
POMT2 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 7 100,350,460 - 100,392,332 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 7 100,350,451 - 100,392,164 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 7 106,564,993 - 106,604,420 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
POMT2 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 24 54,519,980 - 54,567,584 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 24 54,519,754 - 54,567,584 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666053 42,720,189 - 42,767,567 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Pomt2
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000012251 ⟹ ENSCLAP00000012110
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955438 1,179,064 - 1,218,860 (-) Ensembl
RefSeq Acc Id:
XM_005390192 ⟹ XP_005390249
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955438 1,179,064 - 1,218,860 (-) NCBI
Sequence:
TCCCGCCCTCTCGCCCTCCCGCCATGCTCTGCGCCTCGGGCCGCCTCCTAGCCGCCCGGGCGGCGACCCCGCTCCCCGCCCCGCCCAGAGCCCGGGGCCCCGCGCTCCGCTCCCCGCGCAGGGAACTA
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RefSeq Acc Id:
XM_005390193 ⟹ XP_005390250
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955438 1,179,064 - 1,218,860 (-) NCBI
Sequence:
TCCCGCCCTCTCGCCCTCCCGCCATGCTCTGCGCCTCGGGCCGCCTCCTAGCCGCCCGGGCGGCGACCCCGCTCCCCGCCCCGCCCAGAGCCCGGGGCCCCGCGCTCCGCTCCCCGCGCAGGGAACTA
hide sequence
RefSeq Acc Id:
XM_005390194 ⟹ XP_005390251
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955438 1,179,064 - 1,218,860 (-) NCBI
Sequence:
TCCCGCCCTCTCGCCCTCCCGCCATGCTCTGCGCCTCGGGCCGCCTCCTAGCCGCCCGGGCGGCGACCCCGCTCCCCGCCCCGCCCAGAGCCCGGGGCCCCGCGCTCCGCTCCCCGCGCAGGGAACTA
hide sequence
RefSeq Acc Id:
XP_005390249 ⟸ XM_005390192
- Peptide Label:
isoform X1
- UniProtKB:
A0A8C2V9N5 (UniProtKB/TrEMBL)
- Sequence:
MLCASGRLLAARAATPLPAPPRARGPALRSPRRELHFPGQPEPPPWESPAGPLTRQSASPHRRVILRWGRMPPAVGRGLAGSELRLRRSRCGPRAARAVGRDGATQAAARSPKRRDPGSRRFEGAGRQ
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RefSeq Acc Id:
XP_005390250 ⟸ XM_005390193
- Peptide Label:
isoform X2
- Sequence:
MLCASGRLLAARAATPLPAPPRARGPALRSPRRELHFPGQPEPPPWESPAGPLTRQSASPHRRV
hide sequence
RefSeq Acc Id:
XP_005390251 ⟸ XM_005390194
- Peptide Label:
isoform X3
- Sequence:
MLCASGRLLAARAATPLPAPPRARGPALRSPRRELHFPGQPEPPPWESPAGPLTRQSASPHRRVILRWGRMPPAVGRGLAGSELRLRRSRCGPRAARAVGRDGATQAAARSPKRRDPGSRRFEGAGRQ
hide sequence
Ensembl Acc Id:
ENSCLAP00000012110 ⟸ ENSCLAT00000012251
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-08-03
Pomt2
protein O-mannosyltransferase 2
protein-O-mannosyltransferase 2
Symbol and/or name change
5135510 APPROVED
