POMT2 (protein O-mannosyltransferase 2) - Rat Genome Database
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Gene: POMT2 (protein O-mannosyltransferase 2) Pan paniscus
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Symbol: POMT2
Name: protein O-mannosyltransferase 2
RGD ID: 11692792
Description: ENCODES a protein that exhibits mannosyltransferase activity (ortholog); INVOLVED IN positive regulation of protein O-linked glycosylation (ortholog); protein O-linked mannosylation (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2N (ortholog); congenital muscular dystrophy (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11477,029,625 - 77,075,819 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1477,029,625 - 77,075,806 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01457,827,841 - 57,874,100 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
POMT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11477,029,625 - 77,075,819 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1477,029,625 - 77,075,806 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01457,827,841 - 57,874,100 (-)NCBIMhudiblu_PPA_v0panPan3
POMT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1477,274,956 - 77,320,884 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1477,274,956 - 77,320,883 (-)EnsemblGRCh38hg38GRCh38
GRCh381477,274,956 - 77,320,885 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371477,741,299 - 77,787,226 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361476,811,052 - 76,856,970 (-)NCBINCBI36hg18NCBI36
Build 341476,811,053 - 76,856,970NCBI
Celera1457,779,861 - 57,825,801 (-)NCBI
Cytogenetic Map14q24.3NCBI
HuRef1457,907,710 - 57,953,334 (-)NCBIHuRef
CHM1_11477,680,748 - 77,726,684 (-)NCBICHM1_1
Pomt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391287,153,635 - 87,194,742 (-)NCBIGRCm39mm39
GRCm39 Ensembl1287,153,635 - 87,194,742 (-)Ensembl
GRCm381287,106,861 - 87,147,968 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1287,106,861 - 87,147,968 (-)EnsemblGRCm38mm10GRCm38
MGSCv371288,447,816 - 88,488,852 (-)NCBIGRCm37mm9NCBIm37
MGSCv361287,995,969 - 88,037,005 (-)NCBImm8
Celera1288,571,489 - 88,612,407 (-)NCBICelera
Cytogenetic Map12D2NCBI
Pomt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26106,755,462 - 106,794,849 (-)NCBI
Rnor_6.0 Ensembl6111,135,349 - 111,176,918 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.06111,137,329 - 111,176,991 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06120,423,138 - 120,461,156 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46111,242,085 - 111,259,180 (-)NCBIRGSC3.4rn4RGSC3.4
Celera6104,576,761 - 104,616,136 (-)NCBICelera
Cytogenetic Map6q31NCBI
Pomt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554381,179,064 - 1,218,860 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554381,179,064 - 1,218,860 (-)NCBIChiLan1.0ChiLan1.0
POMT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl850,091,865 - 50,133,442 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1850,091,861 - 50,133,388 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Pomt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364886,102,612 - 6,141,842 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
POMT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7100,350,460 - 100,417,173 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17100,350,451 - 100,392,164 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27106,564,993 - 106,604,420 (+)NCBISscrofa10.2Sscrofa10.2susScr3
POMT2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12454,519,980 - 54,567,584 (-)NCBI
ChlSab1.1 Ensembl2454,519,754 - 54,567,584 (-)Ensembl
Pomt2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473424,595,748 - 24,636,845 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003808865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000035378   ⟹   ENSPPAP00000012712
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1477,029,625 - 77,075,806 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000035384   ⟹   ENSPPAP00000012718
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1477,032,049 - 77,075,611 (-)Ensembl
RefSeq Acc Id: XM_003808865   ⟹   XP_003808913
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11477,029,625 - 77,075,806 (-)NCBI
Mhudiblu_PPA_v01457,827,841 - 57,874,100 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003808913 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003808913   ⟸   XM_003808865
- Sequence:
RefSeq Acc Id: ENSPPAP00000012718   ⟸   ENSPPAT00000035384
RefSeq Acc Id: ENSPPAP00000012712   ⟸   ENSPPAT00000035378
Protein Domains
MIR


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029527 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000012712 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAP00000012718 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000035378 UniProtKB/TrEMBL
  ENSPPAT00000035384 UniProtKB/TrEMBL
InterPro GlyclTrfase_39-like UniProtKB/TrEMBL
  Glyco_trans_39/83 UniProtKB/TrEMBL
  MIR_dom_sf UniProtKB/TrEMBL
  MIR_motif UniProtKB/TrEMBL
  PMT_4TMC UniProtKB/TrEMBL
KEGG Report pps:100991424 UniProtKB/TrEMBL
NCBI Gene POMT2 ENTREZGENE
PANTHER PTHR10050 UniProtKB/TrEMBL
Pfam MIR UniProtKB/TrEMBL
  PMT UniProtKB/TrEMBL
  PMT_4TMC UniProtKB/TrEMBL
PROSITE MIR UniProtKB/TrEMBL
SMART MIR UniProtKB/TrEMBL
Superfamily-SCOP SSF82109 UniProtKB/TrEMBL
UniProt A0A2R9A5Z5_PANPA UniProtKB/TrEMBL
  A0A2R9AB99_PANPA UniProtKB/TrEMBL