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Gene: Csdc2 (cold shock domain containing C2) Rattus norvegicus
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Symbol: Csdc2
Name: cold shock domain containing C2
Description: Exhibits RNA binding activity and transcription factor binding activity. Predicted to be involved in regulation of mRNA stability. Localizes to the nucleus. Orthologous to human CSDC2 (cold shock domain containing C2); INTERACTS WITH ammonium chloride; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cold shock domain containing C2, RNA binding; cold shock domain-containing protein C2; Pippin; RNA-binding protein pippin
Orthologs:
Homo sapiens (human) : CSDC2 (cold shock domain containing C2)  HGNC  Alliance
Mus musculus (house mouse) : Csdc2 (cold shock domain containing C2, RNA binding)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Csdc2 (cold shock domain containing C2)
Pan paniscus (bonobo/pygmy chimpanzee) : CSDC2 (cold shock domain containing C2)
Canis lupus familiaris (dog) : CSDC2 (cold shock domain containing C2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Csdc2 (cold shock domain containing C2)
Sus scrofa (pig) : CSDC2 (cold shock domain containing C2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07123,168,811 - 123,183,336 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7123,168,811 - 123,183,335 (+)Ensembl
Rnor_5.07123,144,206 - 123,158,717 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47120,290,137 - 120,323,640 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17120,324,478 - 120,357,857 (+)NCBI
Celera7109,770,665 - 109,782,328 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Csdc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 628780
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.