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Gene: Psmb6 (proteasome 20S subunit beta 6) Rattus norvegicus
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Symbol: Psmb6
Name: proteasome 20S subunit beta 6
RGD ID: 61881
Description: Predicted to have endopeptidase activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process and proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to localize to cytosol; nucleoplasm; and proteasome core complex, beta-subunit complex. Orthologous to human PSMB6 (proteasome 20S subunit beta 6); PARTICIPATES IN ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,2,4-trimethylbenzene; 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: macropain delta chain; multicatalytic endopeptidase complex delta chain; proteasome (prosome, macropain) subunit, beta type 6; proteasome beta 6 subunit; proteasome chain 5; proteasome delta chain; proteasome subunit beta 6; proteasome subunit beta type 6-like; proteasome subunit beta type-6; proteasome subunit Y; Psmb6l
Orthologs:
Homo sapiens (human) : PSMB6 (proteasome 20S subunit beta 6)  HGNC  Alliance
Mus musculus (house mouse) : Psmb6 (proteasome (prosome, macropain) subunit, beta type 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Psmb6 (proteasome 20S subunit beta 6)
Pan paniscus (bonobo/pygmy chimpanzee) : PSMB6 (proteasome 20S subunit beta 6)
Canis lupus familiaris (dog) : PSMB6 (proteasome 20S subunit beta 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Psmb6 (proteasome 20S subunit beta 6)
Sus scrofa (pig) : PSMB6 (proteasome 20S subunit beta 6)
Chlorocebus sabaeus (African green monkey) : PSMB6 (proteasome 20S subunit beta 6)
Heterocephalus glaber (naked mole-rat) : Psmb6 (proteasome 20S subunit beta 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01057,131,339 - 57,133,685 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1057,131,386 - 57,133,637 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01056,888,972 - 56,891,279 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41057,370,397 - 57,372,704 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11057,384,019 - 57,386,327 (+)NCBI
Celera1054,385,536 - 54,387,843 (+)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Psmb6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 61881
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.