Symbol:
Pla2g2c
Name:
phospholipase A2, group IIC
RGD ID:
3340
Description:
Enables calcium-dependent phospholipase A2 activity. Predicted to be involved in phosphatidylcholine metabolic process and phosphatidylglycerol metabolic process. Predicted to be located in extracellular region and membrane. Orthologous to human PLA2G2C (phospholipase A2 group IIC); PARTICIPATES IN alpha-linolenic acid metabolic pathway; arachidonic acid metabolic pathway; ether lipid metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3H-1,2-dithiole-3-thione.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
14 kDa phospholipase A2; GIIC sPLA2; group IIC secretory phospholipase A2; phosphatidylcholine 2-acylhydrolase 2C; phosphatidylcholine 2-acylhydrolase GIIC; phospholipase A2 group IIC; phospholipase A2, group 2C; PLA2-8; sPLA2-IIC
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 156,241,142 - 156,262,368 (+) NCBI GRCr8 mRatBN7.2 5 150,959,365 - 150,981,388 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 150,959,182 - 150,981,377 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 153,657,591 - 153,676,975 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 155,431,891 - 155,451,281 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 155,413,404 - 155,432,759 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 157,163,672 - 157,187,654 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 157,165,341 - 157,187,643 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 160,903,738 - 160,929,464 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 157,536,546 - 157,555,895 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 157,300,874 - 157,568,245 (+) NCBI Celera 5 149,347,976 - 149,367,111 (+) NCBI Celera Cytogenetic Map 5 q36 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Pla2g2c Rat 1,2-dimethylhydrazine decreases expression ISO Pla2g2c (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in decreased expression of PLA2G2C mRNA CTD PMID:22206623 Pla2g2c Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO Pla2g2c (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in increased expression of PLA2G2C mRNA CTD PMID:23994337 Pla2g2c Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of PLA2G2C mRNA CTD PMID:32109520 Pla2g2c Rat 2,3,7,8-Tetrachlorodibenzofuran increases expression EXP 6480464 2 more ... CTD PMID:32109520 Pla2g2c Rat 3,3',4,4',5-pentachlorobiphenyl increases expression ISO Pla2g2c (Mus musculus) 6480464 3 more ... CTD PMID:23994337 Pla2g2c Rat 3H-1,2-dithiole-3-thione increases expression EXP 6480464 1 and 2-dithiol-3-thione results in increased expression of PLA2G2C mRNA CTD PMID:19162173 Pla2g2c Rat aflatoxin B1 increases methylation ISO PLA2G2C (Homo sapiens) 6480464 Aflatoxin B1 results in increased methylation of PLA2G2C gene CTD PMID:27153756 Pla2g2c Rat ammonium chloride affects expression EXP 6480464 Ammonium Chloride affects the expression of PLA2G2C mRNA CTD PMID:16483693 Pla2g2c Rat arsane increases methylation ISO PLA2G2C (Homo sapiens) 6480464 Arsenic results in increased methylation of PLA2G2C gene CTD PMID:25325195 Pla2g2c Rat arsenic atom increases methylation ISO PLA2G2C (Homo sapiens) 6480464 Arsenic results in increased methylation of PLA2G2C gene CTD PMID:25325195 Pla2g2c Rat Azoxymethane multiple interactions ISO Pla2g2c (Mus musculus) 6480464 [titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in increased expression of PLA2G2C mRNA CTD PMID:29950665 Pla2g2c Rat benzo[a]pyrene affects methylation ISO PLA2G2C (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of PLA2G2C promoter CTD PMID:27901495 Pla2g2c Rat beta-naphthoflavone increases expression ISO Pla2g2c (Mus musculus) 6480464 beta-Naphthoflavone results in increased expression of PLA2G2C mRNA CTD PMID:23994337 Pla2g2c Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of PLA2G2C mRNA CTD PMID:25181051 and PMID:34947998 Pla2g2c Rat bisphenol A decreases methylation ISO Pla2g2c (Mus musculus) 6480464 bisphenol A results in decreased methylation of PLA2G2C promoter CTD PMID:27312807 Pla2g2c Rat cadmium dichloride decreases expression EXP 6480464 Cadmium Chloride results in decreased expression of PLA2G2C mRNA CTD PMID:33453195 Pla2g2c Rat Cuprizon increases expression EXP 6480464 Cuprizone results in increased expression of PLA2G2C mRNA CTD PMID:26577399 Pla2g2c Rat decabromodiphenyl ether decreases expression EXP 6480464 decabromobiphenyl ether results in decreased expression of PLA2G2C mRNA CTD PMID:23640034 Pla2g2c Rat dextran sulfate multiple interactions ISO Pla2g2c (Mus musculus) 6480464 [titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in increased expression of PLA2G2C mRNA CTD PMID:29950665 Pla2g2c Rat dichlorine multiple interactions EXP 6480464 [Ozone co-treated with Chlorine] results in increased expression of PLA2G2C mRNA CTD PMID:18636392 Pla2g2c Rat genistein multiple interactions EXP 6480464 [Genistein co-treated with Methoxychlor] results in increased expression of PLA2G2C mRNA CTD PMID:21782745 Pla2g2c Rat genistein increases expression EXP 6480464 Genistein results in increased expression of PLA2G2C mRNA CTD PMID:21782745 Pla2g2c Rat methotrexate affects expression ISO Pla2g2c (Mus musculus) 6480464 Methotrexate affects the expression of PLA2G2C mRNA CTD PMID:18502557 Pla2g2c Rat methoxychlor multiple interactions EXP 6480464 [Genistein co-treated with Methoxychlor] results in increased expression of PLA2G2C mRNA CTD PMID:21782745 Pla2g2c Rat methoxychlor increases expression EXP 6480464 Methoxychlor results in increased expression of PLA2G2C mRNA CTD PMID:21782745 Pla2g2c Rat N-nitrosodiethylamine decreases expression ISO Pla2g2c (Mus musculus) 6480464 Diethylnitrosamine results in decreased expression of PLA2G2C mRNA CTD PMID:17942915 Pla2g2c Rat N-nitrosodiethylamine increases expression ISO Pla2g2c (Mus musculus) 6480464 Diethylnitrosamine results in increased expression of PLA2G2C mRNA CTD PMID:17942915 Pla2g2c Rat N-nitrosodiethylamine multiple interactions ISO Pla2g2c (Mus musculus) 6480464 MET protein inhibits the reaction [Diethylnitrosamine results in decreased expression of PLA2G2C mRNA] and MET protein inhibits the reaction [Diethylnitrosamine results in increased expression of PLA2G2C mRNA] CTD PMID:17942915 Pla2g2c Rat ozone multiple interactions EXP 6480464 [Ozone co-treated with Chlorine] results in increased expression of PLA2G2C mRNA CTD PMID:18636392 Pla2g2c Rat pirinixic acid increases expression ISO Pla2g2c (Mus musculus) 6480464 pirinixic acid results in increased expression of PLA2G2C mRNA CTD PMID:20813756 Pla2g2c Rat propofol increases expression ISO PLA2G2C (Homo sapiens) 6480464 Propofol results in increased expression of PLA2G2C mRNA CTD PMID:35238236 Pla2g2c Rat titanium dioxide increases expression ISO Pla2g2c (Mus musculus) 6480464 titanium dioxide results in increased expression of PLA2G2C mRNA CTD PMID:23557971 Pla2g2c Rat titanium dioxide multiple interactions ISO Pla2g2c (Mus musculus) 6480464 [titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in increased expression of PLA2G2C mRNA CTD PMID:29950665 Pla2g2c Rat trichloroethene decreases expression EXP 6480464 Trichloroethylene results in decreased expression of PLA2G2C mRNA CTD PMID:33387578 Pla2g2c Rat vinclozolin increases expression EXP 6480464 vinclozolin results in increased expression of PLA2G2C mRNA CTD PMID:23869203
Imported Annotations - KEGG (archival)
1,2-dimethylhydrazine (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,3,7,8-Tetrachlorodibenzofuran (EXP) 3,3',4,4',5-pentachlorobiphenyl (ISO) 3H-1,2-dithiole-3-thione (EXP) aflatoxin B1 (ISO) ammonium chloride (EXP) arsane (ISO) arsenic atom (ISO) Azoxymethane (ISO) benzo[a]pyrene (ISO) beta-naphthoflavone (ISO) bisphenol A (EXP,ISO) cadmium dichloride (EXP) Cuprizon (EXP) decabromodiphenyl ether (EXP) dextran sulfate (ISO) dichlorine (EXP) genistein (EXP) methotrexate (ISO) methoxychlor (EXP) N-nitrosodiethylamine (ISO) ozone (EXP) pirinixic acid (ISO) propofol (ISO) titanium dioxide (ISO) trichloroethene (EXP) vinclozolin (EXP)
Pla2g2c (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 156,241,142 - 156,262,368 (+) NCBI GRCr8 mRatBN7.2 5 150,959,365 - 150,981,388 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 150,959,182 - 150,981,377 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 153,657,591 - 153,676,975 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 155,431,891 - 155,451,281 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 155,413,404 - 155,432,759 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 157,163,672 - 157,187,654 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 157,165,341 - 157,187,643 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 160,903,738 - 160,929,464 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 157,536,546 - 157,555,895 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 157,300,874 - 157,568,245 (+) NCBI Celera 5 149,347,976 - 149,367,111 (+) NCBI Celera Cytogenetic Map 5 q36 NCBI
PLA2G2C (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 20,163,055 - 20,186,518 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 20,161,253 - 20,186,518 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 20,489,548 - 20,513,011 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 20,363,071 - 20,374,274 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 1 18,813,602 - 18,824,805 (-) NCBI Celera Cytogenetic Map 1 p36.12 NCBI HuRef 1 18,736,223 - 18,747,426 (-) NCBI HuRef CHM1_1 1 20,600,161 - 20,611,364 (-) NCBI CHM1_1 T2T-CHM13v2.0 1 19,986,700 - 20,010,162 (-) NCBI T2T-CHM13v2.0
Pla2g2c (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 138,452,636 - 138,471,886 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 138,452,103 - 138,473,443 (+) Ensembl GRCm39 Ensembl GRCm38 4 138,725,325 - 138,744,575 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 138,724,792 - 138,746,132 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 138,281,240 - 138,300,490 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 137,997,817 - 138,016,649 (+) NCBI MGSCv36 mm8 Celera 4 140,507,993 - 140,527,237 (+) NCBI Celera Cytogenetic Map 4 D3 NCBI cM Map 4 70.54 NCBI
Pla2g2c (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955452 770,952 - 783,375 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955452 771,031 - 783,323 (-) NCBI ChiLan1.0 ChiLan1.0
PLA2G2C (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 206,931,634 - 206,955,707 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 206,048,484 - 206,072,513 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 19,118,341 - 19,142,668 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 20,162,076 - 20,173,928 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 20,161,553 - 20,176,092 (-) Ensembl panpan1.1 panPan2
PLA2G2C (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 2 78,609,852 - 78,700,940 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 2 75,193,206 - 75,214,536 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 2 79,245,924 - 79,267,303 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 2 79,183,293 - 79,267,303 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 2 76,065,084 - 76,086,418 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 2 77,071,825 - 77,093,190 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 2 78,142,515 - 78,163,886 (+) NCBI UU_Cfam_GSD_1.0
LOC101976106 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
PLA2G2C (Sus scrofa - pig)
PLA2G2C (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 112,365,898 - 112,389,268 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 112,375,528 - 112,389,008 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666033 3,795,009 - 3,887,678 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Pla2g2c (Heterocephalus glaber - naked mole-rat)
.
Assembly: RGSC_v3.4
Assembly: Rnor_5.0
Predicted Target Of
Count of predictions: 103 Count of miRNA genes: 85 Interacting mature miRNAs: 95 Transcripts: ENSRNOT00000043029 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
10053720 Scort26 Serum corticosterone level QTL 26 2.06 0.0147 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 5 124965598 166875058 Rat 8552960 Pigfal15 Plasma insulin-like growth factor 1 level QTL 15 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 5 111416838 156416838 Rat 2302369 Scl60 Serum cholesterol level QTL 60 3.13 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 5 143608201 161165651 Rat 631562 Apr2 Acute phase response QTL 2 3.7 blood murinoglobulin 1 amount (VT:0010597) plasma murinoglobulin 1 level (CMO:0001931) 5 135927956 166875058 Rat 61444 Strs2 Sensitivity to stroke QTL 2 4.7 cerebrum integrity trait (VT:0010549) post-insult time to onset of cerebrovascular lesion (CMO:0002343) 5 135929696 166875058 Rat 1300119 Bp180 Blood pressure QTL 180 3.82 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 5 144358090 157869054 Rat 70156 Niddm30 Non-insulin dependent diabetes mellitus QTL 30 3.98 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 5 129132447 151006154 Rat 8552908 Pigfal4 Plasma insulin-like growth factor 1 level QTL 4 6.6 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 5 128506074 166875058 Rat 61393 Bp7 Blood pressure QTL 7 4.5 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 60293434 161481680 Rat 7794791 Mcs33 Mammary carcinoma susceptibility QTL 33 1.93 mammary gland integrity trait (VT:0010552) mammary tumor incidence/prevalence measurement (CMO:0000946) 5 131345754 166875058 Rat 7207486 Bss109 Bone structure and strength QTL 109 femur strength trait (VT:0010010) femur total energy absorbed before break (CMO:0001677) 5 106906205 151906205 Rat 7207481 Bss106 Bone structure and strength QTL 106 7.9 femur strength trait (VT:0010010) femur ultimate force (CMO:0001675) 5 106906205 151906205 Rat 1302790 Scl20 Serum cholesterol level QTL 20 6.4 0.0001 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 5 82394392 166664054 Rat 1598861 Cm64 Cardiac mass QTL 64 2.9 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 5 127798274 166875058 Rat 1578766 Tcas11 Tongue tumor susceptibility QTL 11 4.12 tongue integrity trait (VT:0010553) number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) 5 46711509 161317411 Rat 631263 Cm24 Cardiac mass QTL 24 3.5 heart mass (VT:0007028) heart left ventricle weight to body weight ratio (CMO:0000530) 5 143799107 158428037 Rat 631505 Bp103 Blood pressure QTL 103 3.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 132717196 165560427 Rat 1549838 Bss4 Bone structure and strength QTL 4 9.2 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 5 106906205 151906205 Rat 1641920 Colcs1 Colorectal carcinoma susceptibility QTL 1 2.99 0.0055 intestine integrity trait (VT:0010554) benign colorectal tumor surface area measurement (CMO:0001799) 5 121846814 166846814 Rat 8694169 Bw148 Body weight QTL 148 5 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 5 128506074 166875058 Rat 1331721 Bp210 Blood pressure QTL 210 3.413 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 5 143069996 166846814 Rat 8657050 Bw146 Body weight QTL 146 19.84 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 5 108938288 153938288 Rat 1576314 Eutr1 Estrogen induced uterine response QTL 1 uterus integrity trait (VT:0010575) pyometritis severity score (CMO:0002009) 5 2138965 166875058 Rat 2317056 Wbc3 White blood cell count QTL 3 2.51 0.01 leukocyte quantity (VT:0000217) white blood cell count (CMO:0000027) 5 105999803 150999803 Rat 634349 Bp139 Blood pressure QTL 139 0.001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 128924607 166875058 Rat 724525 Bp147 Blood pressure QTL 147 4.3 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 126424772 166875058 Rat 1598847 Cm62 Cardiac mass QTL 62 3.4 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 5 108845856 153845856 Rat 2293642 Bss37 Bone structure and strength QTL 37 4.64 0.0001 femur strength trait (VT:0010010) femur ultimate force (CMO:0001675) 5 120740824 151018848 Rat 738018 Anxrr4 Anxiety related response QTL 4 5.1 exploratory behavior trait (VT:0010471) percentage of entries into a discrete space in an experimental apparatus (CMO:0000961) 5 130130159 166875058 Rat 2313096 Bmd78 Bone mineral density QTL 78 3.1 0.0001 tibia mineral mass (VT:1000283) total volumetric bone mineral density (CMO:0001728) 5 144377876 161317411 Rat 7207488 Bss110 Bone structure and strength QTL 1 8.4 femur strength trait (VT:0010010) femur stiffness (CMO:0001674) 5 106906205 151906205 Rat 8694441 Bw169 Body weight QTL 169 17.61 0.001 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight to body weight ratio (CMO:0000635) 5 111416838 156416838 Rat 7207491 Bss112 Bone structure and strength QTL 112 7 femur morphology trait (VT:0000559) femur midshaft cortical cross-sectional area (CMO:0001663) 5 106906205 151906205 Rat 8694389 Bw160 Body weight QTL 160 6.17 0.001 body lean mass (VT:0010483) lean tissue morphological measurement (CMO:0002184) 5 111416838 156416838 Rat 1354598 Srn6 Serum renin concentration QTL 6 3.8 blood renin amount (VT:0003349) plasma renin activity level (CMO:0000116) 5 69540295 151018848 Rat 8694198 Abfw3 Abdominal fat weight QTL 3 16.13 0.001 visceral adipose mass (VT:0010063) abdominal fat pad weight to body weight ratio (CMO:0000095) 5 111416838 156416838 Rat 1298089 Scl14 Serum cholesterol level QTL 14 5.8 0.0004 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 5 108845856 153845856 Rat 1598819 Bp292 Blood pressure QTL 292 4.3 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 127798274 166875058 Rat
RH137900
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 5 150,981,228 - 150,981,363 (+) MAPPER mRatBN7.2 Rnor_6.0 5 157,187,495 - 157,187,629 NCBI Rnor6.0 Rnor_5.0 5 160,929,305 - 160,929,439 UniSTS Rnor5.0 RGSC_v3.4 5 157,558,047 - 157,558,181 UniSTS RGSC3.4 Celera 5 149,369,263 - 149,369,397 UniSTS RH 3.4 Map 5 1033.0 UniSTS Cytogenetic Map 5 q36 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
106
38
44
13
17
13
6
155
82
93
43
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000043029 ⟹ ENSRNOP00000039825
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 5 157,165,888 - 157,185,343 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000087072 ⟹ ENSRNOP00000072615
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 5 150,959,182 - 150,981,377 (+) Ensembl Rnor_6.0 Ensembl 5 157,165,341 - 157,187,643 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000112153 ⟹ ENSRNOP00000097954
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 5 150,968,433 - 150,981,377 (+) Ensembl
RefSeq Acc Id:
NM_019202 ⟹ NP_062075
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 156,242,998 - 156,262,368 (+) NCBI mRatBN7.2 5 150,959,729 - 150,979,077 (+) NCBI Rnor_6.0 5 157,165,888 - 157,185,343 (+) NCBI Rnor_5.0 5 160,903,738 - 160,929,464 (+) NCBI RGSC_v3.4 5 157,536,546 - 157,555,895 (+) RGD Celera 5 149,347,976 - 149,367,111 (+) RGD
Sequence:
CTGATTTGGACTAGCGTGGGCACCGAGGTCGGAGGGCCGAGGGCTACAGGCTGTGGTTCACGGATTCCAGGCTCAGGACCTTGGTGTGGCCCTGCCCCATGGAGGCCACAGGGCCCTGGGCCTGGGTC CCTGACACCGGAACTCTTCTTCCTAACCTGGCCTGACTCTGTCTCCCGGGGAGTATGCGTTCAGGGGAAAGGGAGCCCCGCCCTGGATTGGGGGGGTCTAACTATAGACAGTCAGCAACTTCAGCCAC TTCACCGAGTTTCCCAACAGCTTTGAGATTTGGAAGCCGGAAGCCTGACTGCCTTCTCAGAAGCTACGGTCCACTACCTCAGCCATTCTGTTGGAGCTGAACTGGCAGATGAAGGTGAGACCCAGGCA CCATGGACCTCCTGGTCTCCTCAGGAATGAAGGGCATCGCTGTCTTCCTTGTCTTTATCTTCTGCTGGACAACCTCCACCCTCAGCAGCTTCTGGCAGTTCCAGAGGATGGTCAAACACATCACGGGG CGCAGCGCCTTCTTCTCCTATTACGGATATGGCTGCTACTGTGGGCTTGGGGGCCGAGGGATCCCTGTGGACGCCACAGACAGGTGCTGCTGGGCTCATGACTGTTGCTACCACAAGCTTAAGGAATA TGGCTGCCAGCCCATCTTGAATGCCTATCAGTTTGCCATTGTCAACGGGACCGTGACCTGTGGATGCACCATGGGTGGCGGCTGCTTGTGCGGGCAGAAAGCCTGTGAGTGTGACAAACTGTCTGTGT ACTGCTTCAAGGAGAACCTGGCCACCTACGAGAAAACTTTCAAGCAGCTCTTCCCCACCAGGCCCCAGTGTGGCAGGGACAAACTCCATTGCTAGGCAGGCCACCGTCCCTCTGTCACCTGCTCTAGT CTGAGCCCTTCTGAAAAAAACTGTCTTCCCTTCCCCTCCAAGAGTCCCCAGGCTCCTGCAGCTCAGCCTTGCTGTCTAGGGAGTGTCTTCTCAGGCATTAGGGGACCGGAGGTGGAGAATTCCTGCCC TGGAATCAGACCATGGGTACCTGGCAATTAAGTGATACATTCCGGCAGCAGGAAGCAAGGACACAAGGGAGCAGGGGTGGGGGGACATCCTGCAATCCCAGCATTTGAGAGGTGGAGGCAAGAGGTGG GGGGTAGCCTCCACTATACGGTAAGTTCAAGGCTAACCTGAGCTACCTGAGACCTTGCCTTGAAAAAACTTTTTTAAAAAACGTTTAAAGGAAAAGAAAACAGAAAGACACGGGGACTGGGCTGAAAG GTACTCTCAAACCGATTTCCCAGGAAGAGCGGAGAGCCCCAGGTTCAGCTCCAGCCTGAACTCCCCCATACCCTCAGTCCTGGTCAGGATGTGTGTCTGACTGGGGAACCAAGTCCTCCACCCGGGTG GAGCTTAGCTGGGAACTACGCAGGTGTCCTAGAAAATACAGTCCTAAGAGCCTCACCCGGAGTCTCATCCCCATTTGCTCCAGGACTGACCTCTGTAAATCTTCCAGCAGGAAGCAGGCTGTACCCAT CTCAGGAGGTGGGGTGCTGTTAGAACAATGGTGTGCACCAGTGACACAAAGATGTCATGGTTAAGATGGCATCAAGAAGTGGAAAGGACATTCGGAACAGTGGGTCCAAGGCACCCAAAGTCCTCACC CCAATTTAGAAGCCGTTGGTCCTGTAAGACTTAAATCTACTAAACAAGGAAGGTCTAACTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
hide sequence
RefSeq Acc Id:
XM_006239142 ⟹ XP_006239204
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 156,242,958 - 156,262,363 (+) NCBI mRatBN7.2 5 150,959,723 - 150,981,388 (+) NCBI Rnor_6.0 5 157,165,832 - 157,187,654 (+) NCBI Rnor_5.0 5 160,903,738 - 160,929,464 (+) NCBI
Sequence:
GAGTGGGGGCCACGTGCTTCCGGTGGGACCGGAACCTGCCTGACCTGGACCACAAGCTGATTTGGACTAGCGTGGGCACCGAGGTCGGAGGGCCGAGGGCTACAGGCTGTGGTTCACGGATTCCAGGC TCAGGACCTTGGTGTGGCCCTGCCCCATGGAGGCCACAGGGCCCTGGGCCTGGGTCCCTGACACCGGAACTCTTCTTCCTAACCTGGCCTGACTCTGTCTCCCGGGGAGTGGTCTAACTATAGACAGT CAGCAACTTCAGCCACTTCACCGAGTTTCCCAACAGCTTTGAGATTTGGAAGCCGGAAGCCTGACTGCCTTCTCAGAAGCTACGGTCCACTACCTCAGCCATTCTGTTGGAGCTGAACTGGCAGATGA AGGTGAGACCCAGGCACCATGGACCTCCTGGTCTCCTCAGGAATGAAGGGCATCGCTGTCTTCCTTGTCTTTATCTTCTGCTGGACAACCTCCACCCTCAGCAGCTTCTGGCAGTTCCAGAGGATGGT CAAACACATCACGGGGCGCAGCGCCTTCTTCTCCTATTACGGATATGGCTGCTACTGTGGGCTTGGGGGCCGAGGGATCCCTGTGGACGCCACAGACAGGTGCTGCTGGGCTCATGACTGTTGCTACC ACAAGCTTAAGGAATATGGCTGCCAGCCCATCTTGAATGCCTATCAGTTTGCCATTGTCAACGGGACCGTGACCTGTGGATGCACCATGGGTGGCGGCTGCTTGTGCGGGCAGAAAGCCTGTGAGTGT GACAAACTGTCTGTGTACTGCTTCAAGGAGAACCTGGCCACCTACGAGAAAACTTTCAAGCAGCTCTTCCCCACCAGGCCCCAGTGTGGCAGGGACAAACTCCATTGCTAGGCAGGCCACCGTCCCTC TGTCACCTGCTCTAGTCTGAGCCCTTCTGAAAAAAACTGTCTTCCCTTCCCCTCCAAGAGTCCCCAGGCTCCTGCAGCTCAGCCTTGCTGTCTAGGGAGTGTCTTCTCAGGCATTAGGGGACCGGAGG TGGAGAATTCCTGCCCTGGAATCAGACCATGGGTACCTGGCAATTAAGTGATACATTCCGGCAGCAGGAAGCAAGGACACAAGGGAGCAGGGGTGGGGGGACATCCTGCAATCCCAGCATTTGAGAGG TGGAGGCAAGAGGTGGGGGGTAGCCTCCACTATACGGTAAGTTCAAGGCTAACCTGAGCTACCTGAGACCTTGCCTTGAAAAAACTTTTTTAAAAAACGTTTAAAGGAAAAGAAAACAGAAAGACACG GGGACTGGGCTGAAAGGTACTCTCAAACCGATTTCCCAGGAAGAGCGGAGAGCCCCAGGTTCAGCTCCAGCCTGAACTCCCCCATACCCTCAGTCCTGGTCAGGATGTGTGTCTGACTGGGGAACCAA GTCCTCCACCCGGGTGGAGCTTAGCTGGGAACTACGCAGGTGTCCTAGAAAATACAGTCCTAAGAGCCTCACCCGGAGTCTCATCCCCATTTGCTCCAGGACTGACCTCTGTAAATCTTCCAGCAGGA AGCAGGCTGTACCCATCTCAGGAGGTGGGGTGCTGTTAGAACAATGGTGTGCACCAGTGACACAAAGATGTCATGGTTAAGATGGCATCAAGAAGTGGAAAGGACATTCGGAACAGTGGGTCCAAGGC ACCCAAAGTCCTCACCCCAATTTAGAAGCCGTTGGTCCTGTAAGACTTAAATCTACTAAACAAGGAAGGTCTAACTGGGCTGGAATCTGAAGTTCATGGTGCCAGGCTGGGGCGGTGGGTGGGGGACG TGGCCGTGGCCATGACCATGATTGCCTCTCTGCATGGTGACACTTGCCTTTTGCACCCTAGCTCTCAGCACATCTGAAAAGGACAGACTCTCCTGTTCATTCCTTGAATCTGAGACTCTCCTCACTAA TGTAGCAAAAATGGAGGTCTAAAGTGCAGGCTTCAGCCTCTGAGGTCCAGGGCAGGAGGAAGCTGGGGCTCAGCCTCCTGGAGGATGAGAGCTTGCCGGGTGAGCATCAGCGACAGCAGACCCTTGGG CTCAGAGAGTCCGCAAGCCTGGGAGAGCCTGGCCGAGCCCTGACTGCAGCACACAGAGCCGTGAGCCTCATACAAGAAGCCACATTTTGGGGAAGCTTCAGGGTGGCTGATTCCACAGCTGTTGGGTT CAGAACGGAAGCCGGGAGCACTCACTTCAGATATGGAAGCTTTGTTTTACGAGCGCTTAGCACCAGTTCAGGATCTGAACTTCGTCCTGACCGGAGAGTCCGTACCACATTTTTATAGGATGGGAACA CAGAGCGAGGGGCGTGGAGTAAGCTGTTGAACGACCGATCATATTTTGACCTAAGAGGTTAAGTAAGGACGTTAACATGGGTGACTGGGCATTAGTCAGGTCACCTGGTTTTGGGGTCTTTGAATCAG CTTTCGTGGCCAGGTCCCTTCCTGGACTTTGGCTCGGAATTTAGAACGATAAGGGAACGAAGAGGTGGGCAAGCTTCGGGCAGTCAGTAAGAGGCAGCACATTCATGACCTGTGTGCCTTGTTTAGAT AATGGGATAAGAGTATCTCCTCTCTTACACCCCTTACTGGTTAACAGACAAACACGAGACATCTGAAGAAGCAGGACAGGAGTTAGGTTCTGGGGCACAGGAACATGAACTCGGTTTTGATCCTGCCG GCAAGGTGGATCTTGTTCCTGAGAAGGCTGGACTCAGGAAACTTCCTCTTAACAAGTTAGTTGATGGCGCTGGTCCTTAGTCACCGATACTGTCAGGCTCTCAGCTCTTGGGCCAGACTTGGCGGCCA TGGGAGTGTGGTCACTTGCCCCGTCCCCTTCTTCCAGGAGGTACTGGGGAAAATGGTTGGATTTGTGGAGTTGTAGGGAACACTCGTGGCTCCCTTCACTTAGTAGGTCAGCTAACATATGTGTATCG AGCCCATACCGTGTGCCATGTGCAGTGCTGAGCAGCAGGGAGTCAGAGATTTAAAGACACACACACAGACTTCAAGTCTGAGAATTTTGAATCCCAGGGAGAACGCTGAGAGCCATGGCGGCTTCTAC CAATGCCAGAGGCTAACACCCGGGACTGAGAAAACTAAGCACGAGGAGACAGCAGGGTCAGCAGAGGGCCTGGGAGCTAGGGCCCTGAGCAGTACCTAGTTCAAATCACAGAGTCGTCTTTCTTCCTC CACCCTACCCAGGTACAGCAAGTAGACACGGGTGGGGGCAGGGCAGGGATGCAGGAACATTAGGGCACACCGATGTGGCTAGGCTAAGCTAGAGCATGTTACCTTCTCAGGGGTCCTGTCATGTCAGA GACTGGTTCCAACCTGGAAAGATGTCTGAGTGACAGCTGTGGTAGAAGAAGAGAGGCCAGGGTGATATCAGCATGAAGGGCTGGATTGCTATGTGAGATCCAGATCTCTTCTGCCACTGGGGTCAGCT TCTACACTGGAAATAGATGGGCTGCGTTATGGAGGGTGGTGTGAGTCCCTGTCTGCGTTGTGCCGGGAATCAGAGCAGAGTGTTAGCGCTGTAAAAGGACATGCTGGTGCTTGCAGGAAATCATCGAT TTCTTGGAAGGGCAGCCATTCATCTGCACCAGGGATTGACTTTATGCCAGGCTTGTGATGAGGGTAGAAAAGTAGAAATTCTGTCCGCTGCAAGGAGCAGTCAGAGGACACAAGGACCAAATAGCTTG GGAGTTGCGGAAGTAGGTGTCTGCTGAGGGAGCAGTGACCACTGGGGGAAAGGCTCCTTCAAGGAATTCAGGGACAGGGGTGAGGGCTGACATCTTGCCTGAGACCCTAAAGAAGAGAAGGAGTTGAG AGAGCTGAGTATGCTGTGTGGAGCCCCACCCCCACCCCCACCCCCACCCCAGGTATATGGATGGAGGATAATGCGGGGGTCGGGTTCCTCTCAAATCCATCATCCCACCTTCGAGCTGCTGGCACGGC CTTGCCAGCACAGCCCGATTCTGTGTTGACAAAATACTCGAACGAAATGATTACATGCAAATAAAATGCAAGAGGAAAAATCTAAA
hide sequence
RefSeq Acc Id:
XM_006239143 ⟹ XP_006239205
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 156,241,142 - 156,262,363 (+) NCBI mRatBN7.2 5 150,959,365 - 150,981,388 (+) NCBI Rnor_6.0 5 157,165,713 - 157,187,654 (+) NCBI Rnor_5.0 5 160,903,738 - 160,929,464 (+) NCBI
Sequence:
GGCTCCCAGTTTCTGGGGACCCACAGAGAGCCTCTCACCTCGCAGCTCAGCTCCATCCGCCTCCTGTGCCTGGCTGCGACCAGCTGGGTCTAACTATAGACAGTCAGCAACTTCAGCCACTTCACCGA GTTTCCCAACAGCTTTGAGATTTGGAAGCCGGAAGCCTGACTGCCTTCTCAGAAGCTACGGTCCACTACCTCAGCCATTCTGTTGGAGCTGAACTGGCAGATGAAGGTGAGACCCAGGCACCATGGAC CTCCTGGTCTCCTCAGGAATGAAGGGCATCGCTGTCTTCCTTGTCTTTATCTTCTGCTGGACAACCTCCACCCTCAGCAGCTTCTGGCAGTTCCAGAGGATGGTCAAACACATCACGGGGCGCAGCGC CTTCTTCTCCTATTACGGATATGGCTGCTACTGTGGGCTTGGGGGCCGAGGGATCCCTGTGGACGCCACAGACAGGTGCTGCTGGGCTCATGACTGTTGCTACCACAAGCTTAAGGAATATGGCTGCC AGCCCATCTTGAATGCCTATCAGTTTGCCATTGTCAACGGGACCGTGACCTGTGGATGCACCATGGGTGGCGGCTGCTTGTGCGGGCAGAAAGCCTGTGAGTGTGACAAACTGTCTGTGTACTGCTTC AAGGAGAACCTGGCCACCTACGAGAAAACTTTCAAGCAGCTCTTCCCCACCAGGCCCCAGTGTGGCAGGGACAAACTCCATTGCTAGGCAGGCCACCGTCCCTCTGTCACCTGCTCTAGTCTGAGCCC TTCTGAAAAAAACTGTCTTCCCTTCCCCTCCAAGAGTCCCCAGGCTCCTGCAGCTCAGCCTTGCTGTCTAGGGAGTGTCTTCTCAGGCATTAGGGGACCGGAGGTGGAGAATTCCTGCCCTGGAATCA GACCATGGGTACCTGGCAATTAAGTGATACATTCCGGCAGCAGGAAGCAAGGACACAAGGGAGCAGGGGTGGGGGGACATCCTGCAATCCCAGCATTTGAGAGGTGGAGGCAAGAGGTGGGGGGTAGC CTCCACTATACGGTAAGTTCAAGGCTAACCTGAGCTACCTGAGACCTTGCCTTGAAAAAACTTTTTTAAAAAACGTTTAAAGGAAAAGAAAACAGAAAGACACGGGGACTGGGCTGAAAGGTACTCTC AAACCGATTTCCCAGGAAGAGCGGAGAGCCCCAGGTTCAGCTCCAGCCTGAACTCCCCCATACCCTCAGTCCTGGTCAGGATGTGTGTCTGACTGGGGAACCAAGTCCTCCACCCGGGTGGAGCTTAG CTGGGAACTACGCAGGTGTCCTAGAAAATACAGTCCTAAGAGCCTCACCCGGAGTCTCATCCCCATTTGCTCCAGGACTGACCTCTGTAAATCTTCCAGCAGGAAGCAGGCTGTACCCATCTCAGGAG GTGGGGTGCTGTTAGAACAATGGTGTGCACCAGTGACACAAAGATGTCATGGTTAAGATGGCATCAAGAAGTGGAAAGGACATTCGGAACAGTGGGTCCAAGGCACCCAAAGTCCTCACCCCAATTTA GAAGCCGTTGGTCCTGTAAGACTTAAATCTACTAAACAAGGAAGGTCTAACTGGGCTGGAATCTGAAGTTCATGGTGCCAGGCTGGGGCGGTGGGTGGGGGACGTGGCCGTGGCCATGACCATGATTG CCTCTCTGCATGGTGACACTTGCCTTTTGCACCCTAGCTCTCAGCACATCTGAAAAGGACAGACTCTCCTGTTCATTCCTTGAATCTGAGACTCTCCTCACTAATGTAGCAAAAATGGAGGTCTAAAG TGCAGGCTTCAGCCTCTGAGGTCCAGGGCAGGAGGAAGCTGGGGCTCAGCCTCCTGGAGGATGAGAGCTTGCCGGGTGAGCATCAGCGACAGCAGACCCTTGGGCTCAGAGAGTCCGCAAGCCTGGGA GAGCCTGGCCGAGCCCTGACTGCAGCACACAGAGCCGTGAGCCTCATACAAGAAGCCACATTTTGGGGAAGCTTCAGGGTGGCTGATTCCACAGCTGTTGGGTTCAGAACGGAAGCCGGGAGCACTCA CTTCAGATATGGAAGCTTTGTTTTACGAGCGCTTAGCACCAGTTCAGGATCTGAACTTCGTCCTGACCGGAGAGTCCGTACCACATTTTTATAGGATGGGAACACAGAGCGAGGGGCGTGGAGTAAGC TGTTGAACGACCGATCATATTTTGACCTAAGAGGTTAAGTAAGGACGTTAACATGGGTGACTGGGCATTAGTCAGGTCACCTGGTTTTGGGGTCTTTGAATCAGCTTTCGTGGCCAGGTCCCTTCCTG GACTTTGGCTCGGAATTTAGAACGATAAGGGAACGAAGAGGTGGGCAAGCTTCGGGCAGTCAGTAAGAGGCAGCACATTCATGACCTGTGTGCCTTGTTTAGATAATGGGATAAGAGTATCTCCTCTC TTACACCCCTTACTGGTTAACAGACAAACACGAGACATCTGAAGAAGCAGGACAGGAGTTAGGTTCTGGGGCACAGGAACATGAACTCGGTTTTGATCCTGCCGGCAAGGTGGATCTTGTTCCTGAGA AGGCTGGACTCAGGAAACTTCCTCTTAACAAGTTAGTTGATGGCGCTGGTCCTTAGTCACCGATACTGTCAGGCTCTCAGCTCTTGGGCCAGACTTGGCGGCCATGGGAGTGTGGTCACTTGCCCCGT CCCCTTCTTCCAGGAGGTACTGGGGAAAATGGTTGGATTTGTGGAGTTGTAGGGAACACTCGTGGCTCCCTTCACTTAGTAGGTCAGCTAACATATGTGTATCGAGCCCATACCGTGTGCCATGTGCA GTGCTGAGCAGCAGGGAGTCAGAGATTTAAAGACACACACACAGACTTCAAGTCTGAGAATTTTGAATCCCAGGGAGAACGCTGAGAGCCATGGCGGCTTCTACCAATGCCAGAGGCTAACACCCGGG ACTGAGAAAACTAAGCACGAGGAGACAGCAGGGTCAGCAGAGGGCCTGGGAGCTAGGGCCCTGAGCAGTACCTAGTTCAAATCACAGAGTCGTCTTTCTTCCTCCACCCTACCCAGGTACAGCAAGTA GACACGGGTGGGGGCAGGGCAGGGATGCAGGAACATTAGGGCACACCGATGTGGCTAGGCTAAGCTAGAGCATGTTACCTTCTCAGGGGTCCTGTCATGTCAGAGACTGGTTCCAACCTGGAAAGATG TCTGAGTGACAGCTGTGGTAGAAGAAGAGAGGCCAGGGTGATATCAGCATGAAGGGCTGGATTGCTATGTGAGATCCAGATCTCTTCTGCCACTGGGGTCAGCTTCTACACTGGAAATAGATGGGCTG CGTTATGGAGGGTGGTGTGAGTCCCTGTCTGCGTTGTGCCGGGAATCAGAGCAGAGTGTTAGCGCTGTAAAAGGACATGCTGGTGCTTGCAGGAAATCATCGATTTCTTGGAAGGGCAGCCATTCATC TGCACCAGGGATTGACTTTATGCCAGGCTTGTGATGAGGGTAGAAAAGTAGAAATTCTGTCCGCTGCAAGGAGCAGTCAGAGGACACAAGGACCAAATAGCTTGGGAGTTGCGGAAGTAGGTGTCTGC TGAGGGAGCAGTGACCACTGGGGGAAAGGCTCCTTCAAGGAATTCAGGGACAGGGGTGAGGGCTGACATCTTGCCTGAGACCCTAAAGAAGAGAAGGAGTTGAGAGAGCTGAGTATGCTGTGTGGAGC CCCACCCCCACCCCCACCCCCACCCCAGGTATATGGATGGAGGATAATGCGGGGGTCGGGTTCCTCTCAAATCCATCATCCCACCTTCGAGCTGCTGGCACGGCCTTGCCAGCACAGCCCGATTCTGT GTTGACAAAATACTCGAACGAAATGATTACATGCAAATAAAATGCAAGAGGAAAAATCTAAA
hide sequence
RefSeq Acc Id:
XM_039109368 ⟹ XP_038965296
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 156,242,984 - 156,262,363 (+) NCBI mRatBN7.2 5 150,959,723 - 150,981,388 (+) NCBI
RefSeq Acc Id:
XM_039109369 ⟹ XP_038965297
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 156,242,954 - 156,262,363 (+) NCBI mRatBN7.2 5 150,959,685 - 150,981,388 (+) NCBI
RefSeq Acc Id:
NP_062075 ⟸ NM_019202
- Peptide Label:
precursor
- UniProtKB:
P39878 (UniProtKB/Swiss-Prot), Q4V8L7 (UniProtKB/TrEMBL), A0A0G2K3F5 (UniProtKB/TrEMBL)
- Sequence:
MDLLVSSGMKGIAVFLVFIFCWTTSTLSSFWQFQRMVKHITGRSAFFSYYGYGCYCGLGGRGIPVDATDRCCWAHDCCYHKLKEYGCQPILNAYQFAIVNGTVTCGCTMGGGCLCGQKACECDKLSVY CFKENLATYEKTFKQLFPTRPQCGRDKLHC
hide sequence
RefSeq Acc Id:
XP_006239205 ⟸ XM_006239143
- Peptide Label:
isoform X1
- UniProtKB:
P39878 (UniProtKB/Swiss-Prot), Q4V8L7 (UniProtKB/TrEMBL), A0A0G2K3F5 (UniProtKB/TrEMBL)
- Sequence:
MDLLVSSGMKGIAVFLVFIFCWTTSTLSSFWQFQRMVKHITGRSAFFSYYGYGCYCGLGGRGIP VDATDRCCWAHDCCYHKLKEYGCQPILNAYQFAIVNGTVTCGCTMGGGCLCGQKACECDKLSVYCFKENLATYEKTFKQLFPTRPQCGRDKLHC
hide sequence
RefSeq Acc Id:
XP_006239204 ⟸ XM_006239142
- Peptide Label:
isoform X1
- Sequence:
MDLLVSSGMKGIAVFLVFIFCWTTSTLSSFWQFQRMVKHITGRSAFFSYYGYGCYCGLGGRGIPVDATDRCCWAHDCCYHKLKEYGCQPILNAYQFAIVNGTVTCGCTMGGGCLCGQKACECDKLSVY CFKENLATYEKTFKQLFPTRPQCGRDKLHC
hide sequence
Ensembl Acc Id:
ENSRNOP00000039825 ⟸ ENSRNOT00000043029
Ensembl Acc Id:
ENSRNOP00000072615 ⟸ ENSRNOT00000087072
RefSeq Acc Id:
XP_038965297 ⟸ XM_039109369
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038965296 ⟸ XM_039109368
- Peptide Label:
isoform X1
Ensembl Acc Id:
ENSRNOP00000097954 ⟸ ENSRNOT00000112153
RGD ID: 13694191
Promoter ID: EPDNEW_R4716
Type: single initiation site
Name: Pla2g2c_1
Description: phospholipase A2, group IIC
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 5 157,165,869 - 157,165,929 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-05-15
Pla2g2c
phospholipase A2, group IIC
Pla2g2c
phospholipase A2, group 2C
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2005-01-20
Pla2g2c
phospholipase A2, group 2C
Symbol and Name status set to approved
1299863
APPROVED
2002-06-10
Pla2g2c
phospholipase A2, group 2C
Name updated
70585
PROVISIONAL