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Gene: NCKAP1 (NCK associated protein 1) Chlorocebus sabaeus

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Symbol:

NCKAP1

Name:

NCK associated protein 1

RGD ID:

18695900

Description:

ENCODES a protein that exhibits small GTPase binding (inferred); INVOLVED IN apical protein localization (inferred); basal protein localization (inferred); cell migration (inferred); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

nck-associated protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	68,434,839 - 68,546,431 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	68,433,258 - 68,545,990 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	130,996,820 - 131,108,402 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
NCKAP1	Green Monkey	autism spectrum disorder		ISO	NCKAP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism spectrum disorder	ClinVar	PMID:25741868
NCKAP1	Green Monkey	autistic disorder		ISO	NCKAP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autistic behavior	ClinVar	PMID:25741868 and PMID:33157009
NCKAP1	Green Monkey	developmental and epileptic encephalopathy 11		ISO	NCKAP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Complex neurodevelopmental disorder	ClinVar	PMID:25741868 more ...
NCKAP1	Green Monkey	Developmental Disabilities		ISO	NCKAP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Global developmental delay	ClinVar	PMID:25741875
NCKAP1	Green Monkey	genetic disease		ISO	NCKAP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
NCKAP1	Green Monkey	immunodeficiency 72		ISO	NCKAP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Immunodeficiency 72 with autoinflammation	ClinVar	PMID:25741868
NCKAP1	Green Monkey	intellectual disability		ISO	NCKAP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability	ClinVar
NCKAP1	Green Monkey	Neurodevelopmental Disorders		ISO	NCKAP1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 more ...

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
NCKAP1	Green Monkey	apical protein localization	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	basal protein localization	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	cell migration	involved_in	IEA	PANTHER:PTN000250328	150520179		TreeGrafter	GO_REF:0000118
NCKAP1	Green Monkey	cell migration involved in gastrulation	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	cell morphogenesis	involved_in	IEA	PANTHER:PTN000250328	150520179		TreeGrafter	GO_REF:0000118
NCKAP1	Green Monkey	cell projection assembly	involved_in	IEA	PANTHER:PTN000250328	150520179		TreeGrafter	GO_REF:0000118
NCKAP1	Green Monkey	cortical actin cytoskeleton organization	involved_in	IEA	PANTHER:PTN000250328	150520179		TreeGrafter	GO_REF:0000118
NCKAP1	Green Monkey	embryonic body morphogenesis	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	embryonic foregut morphogenesis	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	embryonic heart tube development	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	endoderm development	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	establishment or maintenance of actin cytoskeleton polarity	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	in utero embryonic development	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	lamellipodium assembly	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	mesodermal cell migration	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	neural tube closure	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	neuron projection morphogenesis	involved_in	IEA	PANTHER:PTN000250328	150520179		TreeGrafter	GO_REF:0000118
NCKAP1	Green Monkey	notochord development	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	notochord morphogenesis	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	paraxial mesoderm development	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	paraxial mesoderm morphogenesis	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	positive regulation of actin filament polymerization	involved_in	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	positive regulation of Arp2/3 complex-mediated actin nucleation	involved_in	IEA	UniProtKB:Q9Y2A7 and ensembl:ENSP00000355348	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	positive regulation of lamellipodium assembly	involved_in	IEA	UniProtKB:P28660 more ...	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	protein stabilization	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	Rac protein signal transduction	involved_in	IEA	UniProtKB:Q9Y2A7 and ensembl:ENSP00000355348	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	regulation of protein localization	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	somitogenesis	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	zygotic determination of anterior/posterior axis, embryo	acts_upstream_of_or_within	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
NCKAP1	Green Monkey	cell projection	located_in	IEA	UniProtKB-KW:KW-0966	150520179		UniProt	GO_REF:0000043
NCKAP1	Green Monkey	filamentous actin	part_of	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	glutamatergic synapse	is_active_in	ISO	Nckap1 (Rattus norvegicus)	9068941	PMID:25293574	SynGO	PMID:25293574 and REF_RGD_ID:405650371
NCKAP1	Green Monkey	lamellipodium	located_in	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	lamellipodium membrane	located_in	IEA	UniProtKB-SubCell:SL-0292	150520179		UniProt	GO_REF:0000044
NCKAP1	Green Monkey	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
NCKAP1	Green Monkey	plasma membrane	located_in	IEA	UniProtKB-KW:KW-1003	150520179		UniProt	GO_REF:0000043
NCKAP1	Green Monkey	postsynapse	is_active_in	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	postsynaptic density	is_active_in	ISO	Nckap1 (Rattus norvegicus)	9068941	PMID:25293574	SynGO	PMID:25293574 and REF_RGD_ID:405650371
NCKAP1	Green Monkey	ruffle	located_in	IEA	UniProtKB:P28660 and ensembl:ENSMUSP00000028386	150520179		Ensembl	GO_REF:0000107
NCKAP1	Green Monkey	SCAR complex	part_of	IEA	PANTHER:PTN000250328	150520179		TreeGrafter	GO_REF:0000118
NCKAP1	Green Monkey	SCAR complex	part_of	IEA	UniProtKB:Q9Y2A7 and ensembl:ENSP00000355348	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
NCKAP1	Green Monkey	protein binding	enables	ISO	UniProtKB:Q5DU14	9068941	PMID:21946561	IntAct	PMID:21946561
NCKAP1	Green Monkey	protein binding	enables	ISO	UniProtKB:B1Q236 more ...	9068941	PMID:24439377	UniProt	PMID:24439377
NCKAP1	Green Monkey	protein binding	enables	ISO	UniProtKB:Q92870-2	9068941	PMID:32814053	IntAct	PMID:32814053
NCKAP1	Green Monkey	protein binding	enables	ISO	UniProtKB:Q8IZP0	9068941	PMID:11418237 more ...	IntAct	PMID:11418237 more ...
NCKAP1	Green Monkey	protein binding		ISO	NCK1 (Homo sapiens)	9068941		RGD	PMID:8605018 and REF_RGD_ID:61669
NCKAP1	Green Monkey	protein binding	enables	ISO	UniProtKB:Q7L576 and UniProtKB:Q8IZP0	9068941	PMID:33961781 and PMID:35271311	IntAct	PMID:33961781 and PMID:35271311
NCKAP1	Green Monkey	protein binding	enables	ISO	UniProtKB:Q5DU14 more ...	9068941	PMID:21946561	UniProt	PMID:21946561
NCKAP1	Green Monkey	protein binding	enables	ISO	UniProtKB:Q7L576	9068941	PMID:15294869 more ...	IntAct	PMID:15294869 more ...
NCKAP1	Green Monkey	protein binding	enables	ISO	UniProtKB:Q14C87	9068941	PMID:33726789	UniProt	PMID:33726789
NCKAP1	Green Monkey	small GTPase binding	contributes_to	IEA	UniProtKB:Q9Y2A7 and ensembl:ENSP00000355348	150520179		Ensembl	GO_REF:0000107

Imported Annotations - PID (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
NCKAP1	Green Monkey	E-cadherin signaling pathway		ISO	NCKAP1 (Homo sapiens)	9068941		PID	PID:200124 and PID:200182
NCKAP1	Green Monkey	platelet-derived growth factor signaling pathway		ISO	NCKAP1 (Homo sapiens)	9068941		PID	PID:200149

PMID:30032202

NCKAP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	68,434,839 - 68,546,431 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	68,433,258 - 68,545,990 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	130,996,820 - 131,108,402 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

NCKAP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	182,909,115 - 183,038,457 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	182,909,115 - 183,038,858 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	183,773,843 - 183,903,185 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	183,497,850 - 183,611,474 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	183,615,110 - 183,728,735	NCBI
Celera	2	177,385,839 - 177,499,386 (-)	NCBI		Celera
Cytogenetic Map	2	q32.1	NCBI
HuRef	2	175,647,499 - 175,761,404 (-)	NCBI		HuRef
CHM1_1	2	183,795,489 - 183,909,486 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	183,398,094 - 183,527,479 (-)	NCBI		T2T-CHM13v2.0

Nckap1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	80,330,856 - 80,411,526 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	80,330,856 - 80,411,724 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	80,500,512 - 80,581,182 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	80,500,512 - 80,581,380 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	80,341,452 - 80,421,122 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	80,302,134 - 80,381,804 (-)	NCBI		MGSCv36	mm8
Celera	2	82,167,966 - 82,247,538 (-)	NCBI		Celera
Cytogenetic Map	2	C3	NCBI
cM Map	2	48.21	NCBI

Nckap1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	85,824,333 - 85,898,748 (-)	NCBI		GRCr8
mRatBN7.2	3	65,417,450 - 65,491,769 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	65,417,453 - 65,492,217 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	68,763,734 - 68,838,101 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	77,347,303 - 77,421,669 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	75,110,005 - 75,184,226 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	67,725,180 - 67,804,680 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	67,725,947 - 67,787,990 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	74,284,277 - 74,361,208 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	63,191,700 - 63,274,021 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	63,099,188 - 63,170,297 (-)	NCBI
Celera	3	64,863,664 - 64,938,000 (-)	NCBI		Celera
Cytogenetic Map	3	q24	NCBI

Nckap1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	14,480,162 - 14,554,702 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	14,476,689 - 14,554,380 (+)	NCBI	ChiLan1.0	ChiLan1.0

NCKAP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	85,580,366 - 85,697,222 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	85,595,344 - 85,712,200 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	70,193,950 - 70,308,442 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	188,003,235 - 188,116,704 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	188,003,235 - 188,116,710 (-)	Ensembl	panpan1.1		panPan2

NCKAP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	36	25,965,243 - 26,054,775 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	36	25,965,938 - 26,054,760 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	36	25,862,726 - 25,966,235 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	36	26,119,068 - 26,222,536 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	36	26,119,080 - 26,222,514 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	36	26,245,261 - 26,348,621 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	36	26,176,339 - 26,279,633 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	36	26,318,225 - 26,421,624 (-)	NCBI		UU_Cfam_GSD_1.0

Nckap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	142,971,863 - 143,070,930 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936509	11,524,556 - 11,624,621 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936509	11,525,764 - 11,624,833 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NCKAP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	88,425,142 - 88,528,326 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	88,425,861 - 88,528,417 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	97,930,698 - 98,032,893 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Nckap1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624844	4,676,741 - 4,773,538 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624844	4,679,840 - 4,773,617 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in NCKAP1
1856 total Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 19p13.2-q13.31(chr19:11227942-44626354)x3	copy number gain	See cases [RCV000133888]	Chr19:11227942..44626354 [GRCh38] Chr19:11338618..45129651 [GRCh37] Chr19:11199618..49821491 [NCBI36] Chr19:19p13.2-q13.31	pathogenic
NR_040109.1(PCAT19):n.1154-2351C>A	single nucleotide variant	Lung cancer [RCV000101263]	Chr19:41458838 [GRCh38] Chr19:41964744 [GRCh37] Chr19:19q13.2	uncertain significance
NR_040109.1(PCAT19):n.469A>G	single nucleotide variant	Lung cancer [RCV000101264]	Chr19:41495020 [GRCh38] Chr19:42000928 [GRCh37] Chr19:19q13.2	uncertain significance
GRCh38/hg38 19q13.12-13.2(chr19:37319377-42738688)x3	copy number gain	See cases [RCV000050636]	Chr19:37319377..42738688 [GRCh38] Chr19:37810279..43242840 [GRCh37] Chr19:42502119..47934680 [NCBI36] Chr19:19q13.12-13.2	pathogenic

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20


RefSeq Transcripts	XM_007965561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038001877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000010735 ⟹ ENSCSAP00000008824

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	10	68,433,258 - 68,545,990 (-)	Ensembl

RefSeq Acc Id:

XM_007965561 ⟹ XP_007963752

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	68,434,839 - 68,546,431 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	130,996,820 - 131,108,402 (+)	NCBI

Sequence:

show sequence

GAGCGCCTGTCAAGCAGTGGGAGGAAAAAGCGCTTGGAGCCACCGGCCCACTCTTAAGCGTAACTCGCCTGGAAAACACCCCACCTCCCAGCAGAGTTTCTGCCGGTTTCTTTAGGAGGGTGGTGCGG
AAAAGCAACTTTTGGGAACTTGAAGGAGAGGGGTGTGGGGCGAAGTGAAAAGAGCACAGAACGCGACCCCACTCCGTCCCCGCTTGGGACTCCCATCCCGGCATCAGGCGTAGTGGGCGGAGTCCGGG
CCAGGGCCAGGGCCAGAGGGGCGGCGGCGGCGAGGCCAGGCCGAGGGCCCGCAGGCCGCTGTTCCCCGTCCGGCCTCGCGGGGGCGCCGGCGCTGCCGATCAGGTGACCGAGCGCCCGTCCGGGGCTG
CGGGAAGCGGCCTCGTTCTCAGCCGCCGGAGACGCCGCCGCCGCCGCCGCCGCCACACCTAGTGGAGGAGCCGGGGAAGGCGGCTCGTTGGGGGCTGGGGCGGAGAGCGCCGGGGGTGGGGGCGGAAG
GGCGGCGGGCGGAAGGCAGAAGGCTGCCGGGGCGCGGGCTGCTGCGGGAGAAGGGGCTCCGAGGCGTCCGCCGCGGCCCTCTCTGGTGCCGGCGCGGGATTGGGGCGCGAGGGCCATGGGCGCGCTCT
CCTAAGGCGGAGGTCGCGGGCGGGAGGGGAGGAGGCCCGAGAGAGGCTGCTGCGGAGGCCGCGGGCCAGTGACTGGGCGCGAGGCGGCCGGCGGCGGCGGCACCACCATGTCGCGCTCAGTGCTGCAG
CCCAGTCAGCAGAAGCTGGCGGAGAAGCTCACCATCCTCAACGACCGGGGCGTCGGCATGCTCACCCGCCTCTACAACATCAAGAAGCAAGGACAAGTTTGGAAGGCATGTGGGGATCCCAAGGCAAA
ACCGTCCTACCTTATCGACAAAAACCTGGAATCTGCTGTGAAATTCATAGTCAGAAAATTCCCTGCTGTAGAAACCCGCAACAACAATCAACAGCTTGCACAACTACAGAAAGAAAAATCAGAGATTC
TGAAAAATCTGGCATTATATTACTTCACATTTGTAGATGTTATGGAATTTAAGGACCATGTTTGTGAATTGCTGAATACTATTGACGTTTGCCAAGTCTTCTTTGATATTACTGTAAACTTTGATTTA
ACGAAGAACTACTTAGATTTAATTATAACCTATACAACACTAATGATACTGCTGTCTCGAATTGAAGAAAGGAAGGCAATCATTGGATTATACAACTATGCCCATGAAATGACTCATGGAGCAAGTGA
CAGAGAATACCCACGCCTTGGCCAGATGATTGTGGATTATGAAAACCCTTTAAAGAAGATGATGGAAGAATTTGTACCCCATAGCAAGTCTCTTTCAGATGCACTAATTTCTCTTCAAATGGTATATC
CTCGAAGGAATCTTTCAGCTGACCAGTGGAGAAATGCCCAGTTATTAAGCCTCATAAGTGCACCTAGTACAATGCTTAATCCAGCGCAGTCCGACACTATGCCTTGTGAATACCTCTCTTTGGATGCA
ATGGAAAAGTGGATTATCTTTGGCTTTATTTTGTGCCATGGGATCCTAAATACTGATGCTACAGCACTGAACCTTTGGAAGCTAGCTCTTCAAAGTAGTTCTTGCCTCTCTCTCTTTCGGGATGAAGT
TTTCCACATACACAAAGCTGCAGAAGACTTATTTGTAAACATACGAGGCTATAATAAACGTATTAATGACATAAGAGAATGCAAGGAGGCAGCCGTGTCACATGCCGGTTCAATGCACAGAGAAAGAC
GCAAGTTTTTAAGATCTGCACTGAAGGAATTGGCTACTGTCCTCTCTGATCAGCCTGGATTGCTAGGTCCCAAGGCACTTTTTGTTTTTATGGCGTTATCCTTTGCCCGTGATGAAATCATCTGGCTA
CTTCGTCATGCAGATAACATGCCAAAGAAGAGTGCAGACGACTTTATAGATAAGCACATTGCTGAATTAATATTTTACATGGAAGAGCTTAGAGCACATGTGAGGAAATATGGACCTGTAATGCAGAG
GTATTACGTGCAGTACCTTTCTGGCTTTGATGCTGTTGTCCTCAATGAACTCGTGCAGAATCTTTCTGTTTGCCCTGAAGATGAATCAATCATCATGTCCTCTTTTGTTAACACTATGACTTCCCTAA
GTGTAAAACAAGTTGAAGATGGGGAAGTATTTGATTTCAGAGGAATGAGATTAGATTGGTTTAGGTTACAGGCATATACTAGTGTCTCTAAGGCTTCACTTGGCCTTGCAGATCACAGAGAACTTGGA
AAGATGATGAATACAATAATTTTTCATACAAAAATGGTAGATTCCTTGGTGGAAATGTTGGTGGAAACATCAGATCTCTCAATATTTTGTTTTTATAGTCGTGCTTTTGAGAAGATGTTTCAACAGTG
TTTGGAGTTACCCTCTCAATCAAGATACTCAATTGCATTTCCACTACTTTGCACTCATTTTATGAGTTGCACGCATGAACTATGTCCAGAAGAGCGACATCATATTGGAGATCGCAGTCTTTCCTTAT
GTAATATGTTCCTAGATGAAATGGCTAAACAAGCCCGAAATCTGATCACTGATATTTGCACAGAACAGTGTACTCTTAGTGACCAGTTGCTGCCCAAGCATTGTGCCAAAACTATCAGTCAAGCAGTG
AATAAGAAATCAAAAAAACAGACTGGTAAGAAAGGGGAACCTGAAAGGGAGAAACCAGGTGTTGAGAGCATGAGGAAAAACAGGCTGGTTGTGACCAACCTTGATAAATTGCACACTGCACTTTCTGA
GTTATGCTTCTCTATAAATTATGTACCAAACATGGTGGTTTGGGAACATACCTTTACCCCACGAGAATATTTGACTTCTCATCTGGAAATACGCTTTACGAAGTCAATTGTCGGGATGACTATGTATA
ATCAAGCCACACAGGAAATTGCAAAACCTTCAGAACTTCTAACAAGTGTAAGAGCATACATGACTGTACTCCAGTCAATAGAAAACTATGTGCAGATTGATATTACAAGAGTATTTAATAATGTGCTT
CTTCAACAAACACAACATTTAGACAGTCATGGAGAGCCAACCATTACAAGTCTATACACAAATTGGTATTTGGAAACTTTGTTACGACAAGTCAGCAATGGCCATATAGCATATTTTCCTGCAATGAA
AGCATTTGTGAACTTACCTACAGAAAATGAATTAACATTCAATGCAGAGGAATATTCTGACATATCAGAAATGAGGTCATTATCAGAACTACTAGGCCCATATGGTATGAAGTTTCTAAGTGAAAGCC
TTATGTGGCATATTTCATCACAAGTTGCTGAACTTAAGAAACTTGTGGTGGAGAATGTTGATGTGTTAACACAGATGAGGACCAGCTTTGACAAACCAGACCAGATGGCTGCACTCTTTAAAAGATTA
TCATCTGTTGACAGTGTCTTGAAGAGGATGACAATAATTGGTGTAATTTTATCCTTCCGATCATTGGCACAAGAAGCACTTAGAGATGTCTTGTCCTACCACATTCCTTTTCTTGTAAGTTCAATTGA
AGATTTTAAGGATCACATTCCAAGGGAAACTGATATGAAGGTTGCAATGAATGTGTATGAATTATCATCAGCTGCTGGATTACCTTGTGAGATTGATCCTGCGTTGGTCGTAGCTCTTTCTTCACAAA
AATCGGAAAACATTAGTCCAGAAGAGGAGTATAAAATTGCCTGCCTTCTCATGGTGTTTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATGTGATGTCTCAGTATAGCCCCGCTATAGAAGGGCAT
TGCAACAACATACATTGCTTGGCCAAAGCCATCAACCAGATTGCTGCAGCTTTGTTTACAATTCACAAAGGAAGCATTGAAGACCGTCTTAAAGAATTTCTGGCGCTTGCATCCTCCAGTCTACTGAA
AATTGGCCAGGAGACAGATAAAACTACAACAAGAAATAGAGAATCAGTTTATTTACTGCTAGATATGATTGTACAAGAATCCCCATTCCTTACAATGGATCTTTTGGAATCTTGTTTTCCTTATGTCT
TGCTGAGAAATGCATACCATGCTGTCTACAAACAAAGTGTTACATCTTCTGCATAAAATACCTACTTATTCAAGACAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAACTATTTT
ACCTTAAGGCCTGAAAAAGTTTTGTGGATTATAAATTTCTTTCATACGGTTGTATTTTCTGATCATTGGTTTCTTAATATGGTTGTACTACAGTATACTTGGTTGATTTAGGTTGCACATTCACTGAA
TTCACTGAGATTATTCCTATAATTTTAGAGTATCATTTATTTGAACAACAGACATTATCAACATGTTTTTGATATTTGATAATGAAAAAAATCTTTGCTTGTTTATTTCTGAAAAAGAATTGTATTTA
GTGATTATTTTAGATAGTGATATTATAGCATTCATCTGTGTGTAAATTATTTCATATAGGGAAGAGTTCTGATCTGTACCTATGGTTCTTATTGAAAACAAAATTGGATGTGCATTTCTGTGATGTTA
TGAATACATTTCTACTTTATTTTGAAACATTTGCCAAACTAAATACTATAACACTGTATAACATTTTAAAATGTTAAAGAACTGCTTAGTATTAGAAGCAGATCATTTCCCCAAATTCTAAAAACAGC
AGCATATGTTGTTGCTTGTATAAAGCCTAGGGATAATTTTTAGACTAACTTCCATGGTGCCCTGTTGGCATTAGCACTACTATTGTACCCTGCTGTATAATAAACAATCTTAGACATTTATCAACTGT
TGATACAAATGTTAGTCCCTAACCACTTTTTATATATGTTTTAAATTTTTGAAATTCAAGTGTACCTGCCATAACATAAAATAAACACTAGACTGTATCACACTTTGAA

hide sequence

RefSeq Acc Id:

XM_007965562 ⟹ XP_007963753

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	68,434,846 - 68,545,780 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	130,997,187 - 131,108,402 (+)	NCBI

Sequence:

show sequence

GGTCGCGGGCGGGAGGGGAGGAGGCCCGAGAGAGGCTGCTGCGGAGGCCGCGGGCCAGTGACTGGGCGCGAGGCGGCCGGCGGCGGCGGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCA
GAAGCTGGCGGAGAAGCTCACCATCCTCAACGACCGGGGCGTCGGCATGCTCACCCGCCTCTACAACATCAAGAAGCAAGGACAAGTTTGGAAGGCATGTGGGGATCCCAAGGCAAAACCGTCCTACC
TTATCGACAAAAACCTGGAATCTGCTGTGAAATTCATAGTCAGAAAATTCCCTGCTGTAGAAACCCGCAACAACAATCTTGCACAACTACAGAAAGAAAAATCAGAGATTCTGAAAAATCTGGCATTA
TATTACTTCACATTTGTAGATGTTATGGAATTTAAGGACCATGTTTGTGAATTGCTGAATACTATTGACGTTTGCCAAGTCTTCTTTGATATTACTGTAAACTTTGATTTAACGAAGAACTACTTAGA
TTTAATTATAACCTATACAACACTAATGATACTGCTGTCTCGAATTGAAGAAAGGAAGGCAATCATTGGATTATACAACTATGCCCATGAAATGACTCATGGAGCAAGTGACAGAGAATACCCACGCC
TTGGCCAGATGATTGTGGATTATGAAAACCCTTTAAAGAAGATGATGGAAGAATTTGTACCCCATAGCAAGTCTCTTTCAGATGCACTAATTTCTCTTCAAATGGTATATCCTCGAAGGAATCTTTCA
GCTGACCAGTGGAGAAATGCCCAGTTATTAAGCCTCATAAGTGCACCTAGTACAATGCTTAATCCAGCGCAGTCCGACACTATGCCTTGTGAATACCTCTCTTTGGATGCAATGGAAAAGTGGATTAT
CTTTGGCTTTATTTTGTGCCATGGGATCCTAAATACTGATGCTACAGCACTGAACCTTTGGAAGCTAGCTCTTCAAAGTAGTTCTTGCCTCTCTCTCTTTCGGGATGAAGTTTTCCACATACACAAAG
CTGCAGAAGACTTATTTGTAAACATACGAGGCTATAATAAACGTATTAATGACATAAGAGAATGCAAGGAGGCAGCCGTGTCACATGCCGGTTCAATGCACAGAGAAAGACGCAAGTTTTTAAGATCT
GCACTGAAGGAATTGGCTACTGTCCTCTCTGATCAGCCTGGATTGCTAGGTCCCAAGGCACTTTTTGTTTTTATGGCGTTATCCTTTGCCCGTGATGAAATCATCTGGCTACTTCGTCATGCAGATAA
CATGCCAAAGAAGAGTGCAGACGACTTTATAGATAAGCACATTGCTGAATTAATATTTTACATGGAAGAGCTTAGAGCACATGTGAGGAAATATGGACCTGTAATGCAGAGGTATTACGTGCAGTACC
TTTCTGGCTTTGATGCTGTTGTCCTCAATGAACTCGTGCAGAATCTTTCTGTTTGCCCTGAAGATGAATCAATCATCATGTCCTCTTTTGTTAACACTATGACTTCCCTAAGTGTAAAACAAGTTGAA
GATGGGGAAGTATTTGATTTCAGAGGAATGAGATTAGATTGGTTTAGGTTACAGGCATATACTAGTGTCTCTAAGGCTTCACTTGGCCTTGCAGATCACAGAGAACTTGGAAAGATGATGAATACAAT
AATTTTTCATACAAAAATGGTAGATTCCTTGGTGGAAATGTTGGTGGAAACATCAGATCTCTCAATATTTTGTTTTTATAGTCGTGCTTTTGAGAAGATGTTTCAACAGTGTTTGGAGTTACCCTCTC
AATCAAGATACTCAATTGCATTTCCACTACTTTGCACTCATTTTATGAGTTGCACGCATGAACTATGTCCAGAAGAGCGACATCATATTGGAGATCGCAGTCTTTCCTTATGTAATATGTTCCTAGAT
GAAATGGCTAAACAAGCCCGAAATCTGATCACTGATATTTGCACAGAACAGTGTACTCTTAGTGACCAGTTGCTGCCCAAGCATTGTGCCAAAACTATCAGTCAAGCAGTGAATAAGAAATCAAAAAA
ACAGACTGGTAAGAAAGGGGAACCTGAAAGGGAGAAACCAGGTGTTGAGAGCATGAGGAAAAACAGGCTGGTTGTGACCAACCTTGATAAATTGCACACTGCACTTTCTGAGTTATGCTTCTCTATAA
ATTATGTACCAAACATGGTGGTTTGGGAACATACCTTTACCCCACGAGAATATTTGACTTCTCATCTGGAAATACGCTTTACGAAGTCAATTGTCGGGATGACTATGTATAATCAAGCCACACAGGAA
ATTGCAAAACCTTCAGAACTTCTAACAAGTGTAAGAGCATACATGACTGTACTCCAGTCAATAGAAAACTATGTGCAGATTGATATTACAAGAGTATTTAATAATGTGCTTCTTCAACAAACACAACA
TTTAGACAGTCATGGAGAGCCAACCATTACAAGTCTATACACAAATTGGTATTTGGAAACTTTGTTACGACAAGTCAGCAATGGCCATATAGCATATTTTCCTGCAATGAAAGCATTTGTGAACTTAC
CTACAGAAAATGAATTAACATTCAATGCAGAGGAATATTCTGACATATCAGAAATGAGGTCATTATCAGAACTACTAGGCCCATATGGTATGAAGTTTCTAAGTGAAAGCCTTATGTGGCATATTTCA
TCACAAGTTGCTGAACTTAAGAAACTTGTGGTGGAGAATGTTGATGTGTTAACACAGATGAGGACCAGCTTTGACAAACCAGACCAGATGGCTGCACTCTTTAAAAGATTATCATCTGTTGACAGTGT
CTTGAAGAGGATGACAATAATTGGTGTAATTTTATCCTTCCGATCATTGGCACAAGAAGCACTTAGAGATGTCTTGTCCTACCACATTCCTTTTCTTGTAAGTTCAATTGAAGATTTTAAGGATCACA
TTCCAAGGGAAACTGATATGAAGGTTGCAATGAATGTGTATGAATTATCATCAGCTGCTGGATTACCTTGTGAGATTGATCCTGCGTTGGTCGTAGCTCTTTCTTCACAAAAATCGGAAAACATTAGT
CCAGAAGAGGAGTATAAAATTGCCTGCCTTCTCATGGTGTTTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATGTGATGTCTCAGTATAGCCCCGCTATAGAAGGGCATTGCAACAACATACATTG
CTTGGCCAAAGCCATCAACCAGATTGCTGCAGCTTTGTTTACAATTCACAAAGGAAGCATTGAAGACCGTCTTAAAGAATTTCTGGCGCTTGCATCCTCCAGTCTACTGAAAATTGGCCAGGAGACAG
ATAAAACTACAACAAGAAATAGAGAATCAGTTTATTTACTGCTAGATATGATTGTACAAGAATCCCCATTCCTTACAATGGATCTTTTGGAATCTTGTTTTCCTTATGTCTTGCTGAGAAATGCATAC
CATGCTGTCTACAAACAAAGTGTTACATCTTCTGCATAAAATACCTACTTATTCAAGACAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAACTATTTTACCTTAAGGCCTGAAAA
AGTTTTGTGGATTATAAATTTCTTTCATACGGTTGTATTTTCTGATCATTGGTTTCTTAATATGGTTGTACTACAGTATACTTGGTTGATTTAGGTTGCACATTCACTGAATTCACTGAGATTATTCC
TATAATTTTAGAGTATCATTTATTTGAACAACAGACATTATCAACATGTTTTTGATATTTGATAATGAAAAAAATCTTTGCTTGTTTATTTCTGAAAAAGAATTGTATTTAGTGATTATTTTAGATAG
TGATATTATAGCATTCATCTGTGTGTAAATTATTTCATATAGGGAAGAGTTCTGATCTGTACCTATGGTTCTTATTGAAAACAAAATTGGATGTGCATTTCTGTGATGTTATGAATACATTTCTACTT
TATTTTGAAACATTTGCCAAACTAAATACTATAACACTGTATAACATTTTAAAATGTTAAAGAACTGCTTAGTATTAGAAGCAGATCATTTCCCCAAATTCTAAAAACAGCAGCATATGTTGTTGCTT
GTATAAAGCCTAGGGATAATTTTTAGACTAACTTCCATGGTGCCCTGTTGGCATTAGCACTACTATTGTACCCTGCTGTATAATAAACAATCTTAGACATTTATCAACTGTTGATACAAATGTTAGTC
CCTAACCACTTTTTATATATGTTTTAAATTTTTGAAATTCAAGTGTACCTGCCATAACATAAAATAAACACTAGACTGTATCACA

hide sequence

RefSeq Acc Id:

XM_007965563 ⟹ XP_007963754

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	68,434,839 - 68,546,431 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	130,997,215 - 131,108,402 (+)	NCBI

Sequence:

show sequence

GAGCGCCTGTCAAGCAGTGGGAGGAAAAAGCGCTTGGAGCCACCGGCCCACTCTTAAGCGTAACTCGCCTGGAAAACACCCCACCTCCCAGCAGAGTTTCTGCCGGTTTCTTTAGGAGGGTGGTGCGG
AAAAGCAACTTTTGGGAACTTGAAGGAGAGGGGTGTGGGGCGAAGTGAAAAGAGCACAGAACGCGACCCCACTCCGTCCCCGCTTGGGACTCCCATCCCGGCATCAGGCGTAGTGGGCGGAGTCCGGG
CCAGGGCCAGGGCCAGAGGGGCGGCGGCGGCGAGGCCAGGCCGAGGGCCCGCAGGCCGCTGTTCCCCGTCCGGCCTCGCGGGGGCGCCGGCGCTGCCGATCAGGTGACCGAGCGCCCGTCCGGGGCTG
CGGGAAGCGGCCTCGTTCTCAGCCGCCGGAGACGCCGCCGCCGCCGCCGCCGCCACACCTAGTGGAGGAGCCGGGGAAGGCGGCTCGTTGGGGGCTGGGGCGGAGAGCGCCGGGGGTGGGGGCGGAAG
GGCGGCGGGCGGAAGGCAGAAGGCTGCCGGGGCGCGGGCTGCTGCGGGAGAAGGGGCTCCGAGGCGTCCGCCGCGGCCCTCTCTGGTGCCGGCGCGGGATTGGGGCGCGAGGGCCATGGGCGCGCTCT
CCTAAGGCGGAGGTCGCGGGCGGGAGGGGAGGAGGCCCGAGAGAGGCTGCTGCGGAGGCCGCGGGCCAGTGACTGGGCGCGAGGCGGCCGGCGGCGGCGGCACCACCATGTCGCGCTCAGTGCTGCAG
CCCAGTCAGCAGAAGCTGGCGGAGAAGCTCACCATCCTCAACGACCGGGGCGTCGGCATGCTCACCCGCCTCTACAACATCAAGAAGGCATGTGGGGATCCCAAGGCAAAACCGTCCTACCTTATCGA
CAAAAACCTGGAATCTGCTGTGAAATTCATAGTCAGAAAATTCCCTGCTGTAGAAACCCGCAACAACAATCAACAGCTTGCACAACTACAGAAAGAAAAATCAGAGATTCTGAAAAATCTGGCATTAT
ATTACTTCACATTTGTAGATGTTATGGAATTTAAGGACCATGTTTGTGAATTGCTGAATACTATTGACGTTTGCCAAGTCTTCTTTGATATTACTGTAAACTTTGATTTAACGAAGAACTACTTAGAT
TTAATTATAACCTATACAACACTAATGATACTGCTGTCTCGAATTGAAGAAAGGAAGGCAATCATTGGATTATACAACTATGCCCATGAAATGACTCATGGAGCAAGTGACAGAGAATACCCACGCCT
TGGCCAGATGATTGTGGATTATGAAAACCCTTTAAAGAAGATGATGGAAGAATTTGTACCCCATAGCAAGTCTCTTTCAGATGCACTAATTTCTCTTCAAATGGTATATCCTCGAAGGAATCTTTCAG
CTGACCAGTGGAGAAATGCCCAGTTATTAAGCCTCATAAGTGCACCTAGTACAATGCTTAATCCAGCGCAGTCCGACACTATGCCTTGTGAATACCTCTCTTTGGATGCAATGGAAAAGTGGATTATC
TTTGGCTTTATTTTGTGCCATGGGATCCTAAATACTGATGCTACAGCACTGAACCTTTGGAAGCTAGCTCTTCAAAGTAGTTCTTGCCTCTCTCTCTTTCGGGATGAAGTTTTCCACATACACAAAGC
TGCAGAAGACTTATTTGTAAACATACGAGGCTATAATAAACGTATTAATGACATAAGAGAATGCAAGGAGGCAGCCGTGTCACATGCCGGTTCAATGCACAGAGAAAGACGCAAGTTTTTAAGATCTG
CACTGAAGGAATTGGCTACTGTCCTCTCTGATCAGCCTGGATTGCTAGGTCCCAAGGCACTTTTTGTTTTTATGGCGTTATCCTTTGCCCGTGATGAAATCATCTGGCTACTTCGTCATGCAGATAAC
ATGCCAAAGAAGAGTGCAGACGACTTTATAGATAAGCACATTGCTGAATTAATATTTTACATGGAAGAGCTTAGAGCACATGTGAGGAAATATGGACCTGTAATGCAGAGGTATTACGTGCAGTACCT
TTCTGGCTTTGATGCTGTTGTCCTCAATGAACTCGTGCAGAATCTTTCTGTTTGCCCTGAAGATGAATCAATCATCATGTCCTCTTTTGTTAACACTATGACTTCCCTAAGTGTAAAACAAGTTGAAG
ATGGGGAAGTATTTGATTTCAGAGGAATGAGATTAGATTGGTTTAGGTTACAGGCATATACTAGTGTCTCTAAGGCTTCACTTGGCCTTGCAGATCACAGAGAACTTGGAAAGATGATGAATACAATA
ATTTTTCATACAAAAATGGTAGATTCCTTGGTGGAAATGTTGGTGGAAACATCAGATCTCTCAATATTTTGTTTTTATAGTCGTGCTTTTGAGAAGATGTTTCAACAGTGTTTGGAGTTACCCTCTCA
ATCAAGATACTCAATTGCATTTCCACTACTTTGCACTCATTTTATGAGTTGCACGCATGAACTATGTCCAGAAGAGCGACATCATATTGGAGATCGCAGTCTTTCCTTATGTAATATGTTCCTAGATG
AAATGGCTAAACAAGCCCGAAATCTGATCACTGATATTTGCACAGAACAGTGTACTCTTAGTGACCAGTTGCTGCCCAAGCATTGTGCCAAAACTATCAGTCAAGCAGTGAATAAGAAATCAAAAAAA
CAGACTGGTAAGAAAGGGGAACCTGAAAGGGAGAAACCAGGTGTTGAGAGCATGAGGAAAAACAGGCTGGTTGTGACCAACCTTGATAAATTGCACACTGCACTTTCTGAGTTATGCTTCTCTATAAA
TTATGTACCAAACATGGTGGTTTGGGAACATACCTTTACCCCACGAGAATATTTGACTTCTCATCTGGAAATACGCTTTACGAAGTCAATTGTCGGGATGACTATGTATAATCAAGCCACACAGGAAA
TTGCAAAACCTTCAGAACTTCTAACAAGTGTAAGAGCATACATGACTGTACTCCAGTCAATAGAAAACTATGTGCAGATTGATATTACAAGAGTATTTAATAATGTGCTTCTTCAACAAACACAACAT
TTAGACAGTCATGGAGAGCCAACCATTACAAGTCTATACACAAATTGGTATTTGGAAACTTTGTTACGACAAGTCAGCAATGGCCATATAGCATATTTTCCTGCAATGAAAGCATTTGTGAACTTACC
TACAGAAAATGAATTAACATTCAATGCAGAGGAATATTCTGACATATCAGAAATGAGGTCATTATCAGAACTACTAGGCCCATATGGTATGAAGTTTCTAAGTGAAAGCCTTATGTGGCATATTTCAT
CACAAGTTGCTGAACTTAAGAAACTTGTGGTGGAGAATGTTGATGTGTTAACACAGATGAGGACCAGCTTTGACAAACCAGACCAGATGGCTGCACTCTTTAAAAGATTATCATCTGTTGACAGTGTC
TTGAAGAGGATGACAATAATTGGTGTAATTTTATCCTTCCGATCATTGGCACAAGAAGCACTTAGAGATGTCTTGTCCTACCACATTCCTTTTCTTGTAAGTTCAATTGAAGATTTTAAGGATCACAT
TCCAAGGGAAACTGATATGAAGGTTGCAATGAATGTGTATGAATTATCATCAGCTGCTGGATTACCTTGTGAGATTGATCCTGCGTTGGTCGTAGCTCTTTCTTCACAAAAATCGGAAAACATTAGTC
CAGAAGAGGAGTATAAAATTGCCTGCCTTCTCATGGTGTTTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATGTGATGTCTCAGTATAGCCCCGCTATAGAAGGGCATTGCAACAACATACATTGC
TTGGCCAAAGCCATCAACCAGATTGCTGCAGCTTTGTTTACAATTCACAAAGGAAGCATTGAAGACCGTCTTAAAGAATTTCTGGCGCTTGCATCCTCCAGTCTACTGAAAATTGGCCAGGAGACAGA
TAAAACTACAACAAGAAATAGAGAATCAGTTTATTTACTGCTAGATATGATTGTACAAGAATCCCCATTCCTTACAATGGATCTTTTGGAATCTTGTTTTCCTTATGTCTTGCTGAGAAATGCATACC
ATGCTGTCTACAAACAAAGTGTTACATCTTCTGCATAAAATACCTACTTATTCAAGACAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAACTATTTTACCTTAAGGCCTGAAAAA
GTTTTGTGGATTATAAATTTCTTTCATACGGTTGTATTTTCTGATCATTGGTTTCTTAATATGGTTGTACTACAGTATACTTGGTTGATTTAGGTTGCACATTCACTGAATTCACTGAGATTATTCCT
ATAATTTTAGAGTATCATTTATTTGAACAACAGACATTATCAACATGTTTTTGATATTTGATAATGAAAAAAATCTTTGCTTGTTTATTTCTGAAAAAGAATTGTATTTAGTGATTATTTTAGATAGT
GATATTATAGCATTCATCTGTGTGTAAATTATTTCATATAGGGAAGAGTTCTGATCTGTACCTATGGTTCTTATTGAAAACAAAATTGGATGTGCATTTCTGTGATGTTATGAATACATTTCTACTTT
ATTTTGAAACATTTGCCAAACTAAATACTATAACACTGTATAACATTTTAAAATGTTAAAGAACTGCTTAGTATTAGAAGCAGATCATTTCCCCAAATTCTAAAAACAGCAGCATATGTTGTTGCTTG
TATAAAGCCTAGGGATAATTTTTAGACTAACTTCCATGGTGCCCTGTTGGCATTAGCACTACTATTGTACCCTGCTGTATAATAAACAATCTTAGACATTTATCAACTGTTGATACAAATGTTAGTCC
CTAACCACTTTTTATATATGTTTTAAATTTTTGAAATTCAAGTGTACCTGCCATAACATAAAATAAACACTAGACTGTATCACACTTTGAA

hide sequence

RefSeq Acc Id:

XM_007965564 ⟹ XP_007963755

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	68,434,846 - 68,545,780 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	130,997,215 - 131,108,402 (+)	NCBI

Sequence:

show sequence

GGTCGCGGGCGGGAGGGGAGGAGGCCCGAGAGAGGCTGCTGCGGAGGCCGCGGGCCAGTGACTGGGCGCGAGGCGGCCGGCGGCGGCGGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCA
GAAGCTGGCGGAGAAGCTCACCATCCTCAACGACCGGGGCGTCGGCATGCTCACCCGCCTCTACAACATCAAGAAGGCATGTGGGGATCCCAAGGCAAAACCGTCCTACCTTATCGACAAAAACCTGG
AATCTGCTGTGAAATTCATAGTCAGAAAATTCCCTGCTGTAGAAACCCGCAACAACAATCTTGCACAACTACAGAAAGAAAAATCAGAGATTCTGAAAAATCTGGCATTATATTACTTCACATTTGTA
GATGTTATGGAATTTAAGGACCATGTTTGTGAATTGCTGAATACTATTGACGTTTGCCAAGTCTTCTTTGATATTACTGTAAACTTTGATTTAACGAAGAACTACTTAGATTTAATTATAACCTATAC
AACACTAATGATACTGCTGTCTCGAATTGAAGAAAGGAAGGCAATCATTGGATTATACAACTATGCCCATGAAATGACTCATGGAGCAAGTGACAGAGAATACCCACGCCTTGGCCAGATGATTGTGG
ATTATGAAAACCCTTTAAAGAAGATGATGGAAGAATTTGTACCCCATAGCAAGTCTCTTTCAGATGCACTAATTTCTCTTCAAATGGTATATCCTCGAAGGAATCTTTCAGCTGACCAGTGGAGAAAT
GCCCAGTTATTAAGCCTCATAAGTGCACCTAGTACAATGCTTAATCCAGCGCAGTCCGACACTATGCCTTGTGAATACCTCTCTTTGGATGCAATGGAAAAGTGGATTATCTTTGGCTTTATTTTGTG
CCATGGGATCCTAAATACTGATGCTACAGCACTGAACCTTTGGAAGCTAGCTCTTCAAAGTAGTTCTTGCCTCTCTCTCTTTCGGGATGAAGTTTTCCACATACACAAAGCTGCAGAAGACTTATTTG
TAAACATACGAGGCTATAATAAACGTATTAATGACATAAGAGAATGCAAGGAGGCAGCCGTGTCACATGCCGGTTCAATGCACAGAGAAAGACGCAAGTTTTTAAGATCTGCACTGAAGGAATTGGCT
ACTGTCCTCTCTGATCAGCCTGGATTGCTAGGTCCCAAGGCACTTTTTGTTTTTATGGCGTTATCCTTTGCCCGTGATGAAATCATCTGGCTACTTCGTCATGCAGATAACATGCCAAAGAAGAGTGC
AGACGACTTTATAGATAAGCACATTGCTGAATTAATATTTTACATGGAAGAGCTTAGAGCACATGTGAGGAAATATGGACCTGTAATGCAGAGGTATTACGTGCAGTACCTTTCTGGCTTTGATGCTG
TTGTCCTCAATGAACTCGTGCAGAATCTTTCTGTTTGCCCTGAAGATGAATCAATCATCATGTCCTCTTTTGTTAACACTATGACTTCCCTAAGTGTAAAACAAGTTGAAGATGGGGAAGTATTTGAT
TTCAGAGGAATGAGATTAGATTGGTTTAGGTTACAGGCATATACTAGTGTCTCTAAGGCTTCACTTGGCCTTGCAGATCACAGAGAACTTGGAAAGATGATGAATACAATAATTTTTCATACAAAAAT
GGTAGATTCCTTGGTGGAAATGTTGGTGGAAACATCAGATCTCTCAATATTTTGTTTTTATAGTCGTGCTTTTGAGAAGATGTTTCAACAGTGTTTGGAGTTACCCTCTCAATCAAGATACTCAATTG
CATTTCCACTACTTTGCACTCATTTTATGAGTTGCACGCATGAACTATGTCCAGAAGAGCGACATCATATTGGAGATCGCAGTCTTTCCTTATGTAATATGTTCCTAGATGAAATGGCTAAACAAGCC
CGAAATCTGATCACTGATATTTGCACAGAACAGTGTACTCTTAGTGACCAGTTGCTGCCCAAGCATTGTGCCAAAACTATCAGTCAAGCAGTGAATAAGAAATCAAAAAAACAGACTGGTAAGAAAGG
GGAACCTGAAAGGGAGAAACCAGGTGTTGAGAGCATGAGGAAAAACAGGCTGGTTGTGACCAACCTTGATAAATTGCACACTGCACTTTCTGAGTTATGCTTCTCTATAAATTATGTACCAAACATGG
TGGTTTGGGAACATACCTTTACCCCACGAGAATATTTGACTTCTCATCTGGAAATACGCTTTACGAAGTCAATTGTCGGGATGACTATGTATAATCAAGCCACACAGGAAATTGCAAAACCTTCAGAA
CTTCTAACAAGTGTAAGAGCATACATGACTGTACTCCAGTCAATAGAAAACTATGTGCAGATTGATATTACAAGAGTATTTAATAATGTGCTTCTTCAACAAACACAACATTTAGACAGTCATGGAGA
GCCAACCATTACAAGTCTATACACAAATTGGTATTTGGAAACTTTGTTACGACAAGTCAGCAATGGCCATATAGCATATTTTCCTGCAATGAAAGCATTTGTGAACTTACCTACAGAAAATGAATTAA
CATTCAATGCAGAGGAATATTCTGACATATCAGAAATGAGGTCATTATCAGAACTACTAGGCCCATATGGTATGAAGTTTCTAAGTGAAAGCCTTATGTGGCATATTTCATCACAAGTTGCTGAACTT
AAGAAACTTGTGGTGGAGAATGTTGATGTGTTAACACAGATGAGGACCAGCTTTGACAAACCAGACCAGATGGCTGCACTCTTTAAAAGATTATCATCTGTTGACAGTGTCTTGAAGAGGATGACAAT
AATTGGTGTAATTTTATCCTTCCGATCATTGGCACAAGAAGCACTTAGAGATGTCTTGTCCTACCACATTCCTTTTCTTGTAAGTTCAATTGAAGATTTTAAGGATCACATTCCAAGGGAAACTGATA
TGAAGGTTGCAATGAATGTGTATGAATTATCATCAGCTGCTGGATTACCTTGTGAGATTGATCCTGCGTTGGTCGTAGCTCTTTCTTCACAAAAATCGGAAAACATTAGTCCAGAAGAGGAGTATAAA
ATTGCCTGCCTTCTCATGGTGTTTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATGTGATGTCTCAGTATAGCCCCGCTATAGAAGGGCATTGCAACAACATACATTGCTTGGCCAAAGCCATCAA
CCAGATTGCTGCAGCTTTGTTTACAATTCACAAAGGAAGCATTGAAGACCGTCTTAAAGAATTTCTGGCGCTTGCATCCTCCAGTCTACTGAAAATTGGCCAGGAGACAGATAAAACTACAACAAGAA
ATAGAGAATCAGTTTATTTACTGCTAGATATGATTGTACAAGAATCCCCATTCCTTACAATGGATCTTTTGGAATCTTGTTTTCCTTATGTCTTGCTGAGAAATGCATACCATGCTGTCTACAAACAA
AGTGTTACATCTTCTGCATAAAATACCTACTTATTCAAGACAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAACTATTTTACCTTAAGGCCTGAAAAAGTTTTGTGGATTATAAA
TTTCTTTCATACGGTTGTATTTTCTGATCATTGGTTTCTTAATATGGTTGTACTACAGTATACTTGGTTGATTTAGGTTGCACATTCACTGAATTCACTGAGATTATTCCTATAATTTTAGAGTATCA
TTTATTTGAACAACAGACATTATCAACATGTTTTTGATATTTGATAATGAAAAAAATCTTTGCTTGTTTATTTCTGAAAAAGAATTGTATTTAGTGATTATTTTAGATAGTGATATTATAGCATTCAT
CTGTGTGTAAATTATTTCATATAGGGAAGAGTTCTGATCTGTACCTATGGTTCTTATTGAAAACAAAATTGGATGTGCATTTCTGTGATGTTATGAATACATTTCTACTTTATTTTGAAACATTTGCC
AAACTAAATACTATAACACTGTATAACATTTTAAAATGTTAAAGAACTGCTTAGTATTAGAAGCAGATCATTTCCCCAAATTCTAAAAACAGCAGCATATGTTGTTGCTTGTATAAAGCCTAGGGATA
ATTTTTAGACTAACTTCCATGGTGCCCTGTTGGCATTAGCACTACTATTGTACCCTGCTGTATAATAAACAATCTTAGACATTTATCAACTGTTGATACAAATGTTAGTCCCTAACCACTTTTTATAT
ATGTTTTAAATTTTTGAAATTCAAGTGTACCTGCCATAACATAAAATAAACACTAGACTGTATCACA

hide sequence

RefSeq Acc Id:

XM_038001877 ⟹ XP_037857805

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666040	130,997,187 - 131,108,402 (+)	NCBI


Protein RefSeqs	XP_007963752	(Get FASTA)	NCBI Sequence Viewer
	XP_007963753	(Get FASTA)	NCBI Sequence Viewer
	XP_007963754	(Get FASTA)	NCBI Sequence Viewer
	XP_007963755	(Get FASTA)	NCBI Sequence Viewer
	XP_037857805	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000008824
	ENSCSAP00000008824.1

RefSeq Acc Id:	XP_007963754 ⟸ XM_007965563
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9RJN5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007963752 ⟸ XM_007965561
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007963755 ⟸ XM_007965564
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_007963753 ⟸ XM_007965562
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSCSAP00000008824 ⟸ ENSCSAT00000010735

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000012646	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000010735.1	UniProtKB/TrEMBL
InterPro	Nck-associated_protein-1	UniProtKB/TrEMBL
NCBI Gene	NCKAP1	ENTREZGENE
PANTHER	NCK-ASSOCIATED PROTEIN 1	UniProtKB/TrEMBL
	PTHR12093	UniProtKB/TrEMBL
Pfam	Nckap1	UniProtKB/TrEMBL
UniProt	A0A0D9RJN5	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)