Symbol:
SFTPC
Name:
surfactant protein C
RGD ID:
18338387
Description:
ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular space (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
pulmonary surfactant-associated protein C
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 8 20,229,756 - 20,233,568 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 8 20,230,870 - 20,234,020 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666052 22,002,517 - 22,009,591 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
SFTPC Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 8 20,229,756 - 20,233,568 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 8 20,230,870 - 20,234,020 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666052 22,002,517 - 22,009,591 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
SFTPC Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 8 22,157,383 - 22,164,479 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 8 22,156,913 - 22,164,479 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 8 22,014,896 - 22,021,992 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 8 22,075,129 - 22,077,937 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 8 22,075,112 - 22,077,928 NCBI Celera 8 20,981,168 - 20,983,976 (+) NCBI Celera Cytogenetic Map 8 p21.3 NCBI HuRef 8 20,561,488 - 20,564,296 (+) NCBI HuRef CHM1_1 8 22,220,843 - 22,223,651 (+) NCBI CHM1_1 T2T-CHM13v2.0 8 22,431,328 - 22,438,424 (+) NCBI T2T-CHM13v2.0
Sftpc Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 14 70,758,381 - 70,761,521 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 14 70,758,389 - 70,761,521 (-) Ensembl GRCm39 Ensembl GRCm38 14 70,520,941 - 70,524,081 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 14 70,520,949 - 70,524,081 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 14 70,920,748 - 70,923,888 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 14 69,256,020 - 69,259,150 (-) NCBI MGSCv36 mm8 Celera 14 68,062,491 - 68,065,631 (-) NCBI Celera Cytogenetic Map 14 D2 NCBI cM Map 14 36.32 NCBI
Sftpc Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 15 52,006,274 - 52,009,324 (-) NCBI GRCr8 mRatBN7.2 15 45,596,565 - 45,599,615 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 15 45,596,574 - 45,610,777 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 15 49,714,437 - 49,717,379 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 15 50,825,943 - 50,828,885 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 15 47,685,234 - 47,688,176 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 15 52,211,538 - 52,214,480 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 15 52,211,544 - 52,214,616 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 15 55,935,055 - 55,937,997 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 15 50,923,105 - 50,926,047 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 15 50,938,884 - 50,941,827 (-) NCBI Celera 15 45,274,971 - 45,277,913 (-) NCBI Celera Cytogenetic Map 15 p11 NCBI
Sftpc Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955403 45,649,122 - 45,651,837 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955403 45,649,149 - 45,651,421 (+) NCBI ChiLan1.0 ChiLan1.0
SFTPC Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 7 40,658,965 - 40,666,346 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 8 16,384,149 - 16,391,532 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 8 21,402,060 - 21,409,438 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 8 18,343,007 - 18,348,764 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 8 18,345,940 - 18,348,764 (+) Ensembl panpan1.1 panPan2
SFTPC Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 25 35,088,295 - 35,090,995 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 25 35,088,279 - 35,091,457 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 25 35,677,864 - 35,680,614 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 25 35,299,616 - 35,302,366 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 25 35,299,694 - 35,302,250 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 25 35,245,093 - 35,247,843 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 25 35,099,613 - 35,102,363 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 25 35,255,134 - 35,257,884 (-) NCBI UU_Cfam_GSD_1.0
Sftpc Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404943 12,588,481 - 12,596,579 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936555 5,979,417 - 5,982,011 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936555 5,966,610 - 5,982,083 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
SFTPC Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 14 6,440,309 - 6,443,095 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 14 6,440,309 - 6,443,104 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 14 6,868,096 - 6,880,564 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
Sftpc
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCSAT00000014640 ⟹ ENSCSAP00000012606
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 Ensembl 8 20,230,870 - 20,234,020 (+) Ensembl
RefSeq Acc Id:
XM_037983686 ⟹ XP_037839614
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source Vero_WHO_p1.0 NW_023666052 22,002,526 - 22,008,373 (-) NCBI
RefSeq Acc Id:
XM_037983687 ⟹ XP_037839615
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source Vero_WHO_p1.0 NW_023666052 22,002,517 - 22,006,329 (-) NCBI
RefSeq Acc Id:
XM_037983688 ⟹ XP_037839616
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source Vero_WHO_p1.0 NW_023666052 22,002,517 - 22,009,591 (-) NCBI
RefSeq Acc Id:
XM_037983689 ⟹ XP_037839617
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source Vero_WHO_p1.0 NW_023666052 22,002,517 - 22,008,526 (-) NCBI
RefSeq Acc Id:
XM_037983690 ⟹ XP_037839618
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source Vero_WHO_p1.0 NW_023666052 22,002,517 - 22,005,308 (-) NCBI
RefSeq Acc Id:
XM_037983691 ⟹ XP_037839619
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source Vero_WHO_p1.0 NW_023666052 22,002,523 - 22,009,591 (-) NCBI
Ensembl Acc Id:
ENSCSAP00000012606 ⟸ ENSCSAT00000014640
RefSeq Acc Id:
XP_037839616 ⟸ XM_037983688
- Peptide Label:
isoform X3
- UniProtKB:
A0A0D9RVG7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_037839617 ⟸ XM_037983689
- Peptide Label:
isoform X3
- UniProtKB:
A0A0D9RVG7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_037839615 ⟸ XM_037983687
- Peptide Label:
isoform X2
- UniProtKB:
A0A0D9RVG7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_037839618 ⟸ XM_037983690
- Peptide Label:
isoform X2
- UniProtKB:
A0A0D9RVG7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_037839619 ⟸ XM_037983691
- Peptide Label:
isoform X3
- UniProtKB:
A0A0D9RVG7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_037839614 ⟸ XM_037983686
- Peptide Label:
isoform X1
