Sftpb (surfactant associated protein B) - Rat Genome Database
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Gene: Sftpb (surfactant associated protein B) Mus musculus
Analyze
Symbol: Sftpb
Name: surfactant associated protein B
RGD ID: 737198
MGI Page MGI
Description: Is expressed in respiratory system. Human ortholog(s) of this gene implicated in lung disease (multiple); respiratory syncytial virus infectious disease; and toxic shock syndrome. Orthologous to human SFTPB (surfactant protein B); INTERACTS WITH 1,2-dichloroethane; amiodarone; ATP.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI562151; pulmonary surfactant-associated protein B; pulmonary surfactant-associated proteolipid SPL(Phe); SF-; SF-B; Sft; Sftp; Sftp-3; Sftp3; SP; SP-B
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39672,281,594 - 72,291,356 (+)NCBIGRCm39mm39
GRCm39 Ensembl672,281,594 - 72,291,354 (+)Ensembl
GRCm38672,304,610 - 72,314,373 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl672,304,610 - 72,314,371 (+)EnsemblGRCm38mm10GRCm38
MGSCv37672,253,239 - 72,264,364 (+)NCBIGRCm37mm9NCBIm37
MGSCv36672,232,754 - 72,243,879 (+)NCBImm8
Celera674,392,942 - 74,404,491 (+)NCBICelera
Cytogenetic Map6C1NCBI
cM Map632.27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
1. Amin RS, etal., J Pediatr. 2001 Jul;139(1):85-92.
2. Atochina EN, etal., J Lab Clin Med. 2001 Jun;137(6):429-39.
3. Atochina EN, etal., Respir Res. 2003 Dec 8;4:15. Print 2003.
4. Atochina-Vasserman EN, etal., J Immunol. 2009 Feb 15;182(4):2277-87.
5. Cleary GM, etal., Pediatrics. 1997 Dec;100(6):998-1003.
6. Doyle IR, etal., Am J Respir Crit Care Med. 1997 Oct;156(4 Pt 1):1217-29.
7. Epaud R, etal., Am J Respir Cell Mol Biol. 2003 Mar;28(3):373-8.
8. Erpenbeck VJ, etal., Allergy. 2006 May;61(5):598-604.
9. Ewis AA, etal., Am J Ind Med. 2006 May;49(5):367-73.
10. Floros J, etal., Biochem J. 1995 Jan 15;305 ( Pt 2):583-90.
11. Foreman MG, etal., Eur Respir J. 2008 Oct;32(4):938-44. Epub 2008 Jun 11.
12. Fredenburgh LE, etal., Cell Mol Biol (Noisy-le-grand). 2005 Oct 3;51(5):513-20.
13. Fu JH, etal., Zhonghua Er Ke Za Zhi. 2008 Jul;46(7):540-3.
14. Fujita M, etal., Cytokine. 2005 Jul 7;31(1):25-33.
15. Gong MN, etal., Chest. 2004 Jan;125(1):203-11.
16. Griese M, etal., Am J Respir Crit Care Med. 2004 Nov 1;170(9):1000-5. Epub 2004 Jul 21.
17. Griese M, etal., Respir Res. 2005 Jul 22;6:80.
18. Griese M, etal., Respir Res. 2005 Nov 7;6:133.
19. Guo X, etal., Eur Respir J. 2001 Sep;18(3):482-90.
20. Guttentag SH, etal., Am J Respir Cell Mol Biol. 2005 Jul;33(1):14-21. Epub 2005 Mar 24.
21. Haataja R, etal., Hum Mol Genet. 2000 Nov 1;9(18):2751-60.
22. Haczku A, etal., Am J Respir Cell Mol Biol. 2001 Jul;25(1):45-50.
23. Hersh CP, etal., Am J Respir Cell Mol Biol. 2005 Jul;33(1):71-8. Epub 2005 Apr 7.
24. Hu R, etal., J Huazhong Univ Sci Technolog Med Sci. 2004;24(3):216-8, 238.
25. Ikegami M, etal., Am J Physiol Lung Cell Mol Physiol. 2005 Dec;289(6):L962-70. Epub 2005 Jul 15.
26. Inselman LS, etal., Lung. 2004;182(2):101-17.
27. Jennings VM, etal., Am J Respir Cell Mol Biol. 1995 Sep;13(3):297-306.
28. Kerr MH and Paton JY, Am J Respir Crit Care Med. 1999 Apr;159(4 Pt 1):1115-8.
29. Makri V, etal., Eur J Pediatr. 2002 Nov;161(11):604-8. Epub 2002 Sep 13.
30. Melton KR, etal., Am J Physiol Lung Cell Mol Physiol. 2003 Sep;285(3):L543-9. Epub 2003 Mar 14.
31. MGD and Homologene mouse data transfer
32. MGD data from the GO Consortium
33. MGD IEA
34. Nogee LM, etal., J Clin Invest. 1994 Apr;93(4):1860-3.
35. OMIM Disease Annotation Pipeline
36. Pavlovic J, etal., Dis Markers. 2006;22(5-6):277-91.
37. Puthothu B, etal., BMC Pulm Med. 2007 May 11;7:6.
38. Quasney MW, etal., Crit Care Med. 2004 May;32(5):1115-9.
39. RGD automated import pipeline
40. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
41. RGD automated import pipeline for gene-chemical interactions
42. Rova M, etal., Hum Mol Genet. 2004 Jun 1;13(11):1095-104. Epub 2004 Apr 21.
43. Russo TA, etal., Am J Physiol Lung Cell Mol Physiol. 2002 Sep;283(3):L655-63.
44. Savani RC, etal., Am J Physiol Lung Cell Mol Physiol. 2001 Sep;281(3):L685-96.
45. Schmidt R, etal., Respir Res. 2007 Jul 27;8:55.
46. Schmiedl A, etal., Exp Toxicol Pathol. 2005 Mar;56(4-5):265-72.
47. Seifart C, etal., Dis Markers. 2002;18(3):129-36.
48. Selman M, etal., Hum Genet. 2003 Nov;113(6):542-50. Epub 2003 Sep 6.
49. Seymour JF, etal., Thorax. 2003 Mar;58(3):252-7.
50. Sugahara K, etal., Lab Invest. 1996 Jan;74(1):209-20.
51. Sumita Y, etal., Rheumatology (Oxford). 2008 Mar;47(3):289-91. Epub 2008 Feb 8.
52. Suzuki Y, etal., Int J Exp Pathol. 1992 Jun;73(3):325-33.
53. Tokieda K, etal., Am J Respir Cell Mol Biol. 1999 Oct;21(4):463-72.
54. Vaughan KT, etal., Genomics 1996 Aug 15;36(1):29-38.
55. Walther FJ, etal., Exp Lung Res. 2002 Dec;28(8):623-40.
56. White CW, etal., Am J Respir Cell Mol Biol. 2001 Jul;25(1):51-9.
57. Woodworth BA, etal., Laryngoscope. 2007 Jul;117(7):1296-301.
58. Yin XJ, etal., Zhonghua Er Ke Za Zhi. 2008 Jan;46(1):9-12.
59. Yu ZW and Zhang JH, Allergy Asthma Proc. 2008 Sep-Oct;29(5):486-92.
Additional References at PubMed
PMID:1346779   PMID:1733280   PMID:7628695   PMID:7642621   PMID:7644495   PMID:7900819   PMID:7913017   PMID:7987303   PMID:8174789   PMID:8290278   PMID:8325640   PMID:8751373  
PMID:8813084   PMID:8967504   PMID:9006067   PMID:9056643   PMID:9441679   PMID:9813377   PMID:9922208   PMID:9925645   PMID:10191100   PMID:10393388   PMID:10409672   PMID:10479457  
PMID:10590028   PMID:10652327   PMID:10675334   PMID:10719668   PMID:10744075   PMID:10749753   PMID:10749754   PMID:10852901   PMID:11238885   PMID:11415940   PMID:11437453   PMID:11458389  
PMID:11493558   PMID:11748835   PMID:11751207   PMID:11796659   PMID:11850179   PMID:11954676   PMID:12024028   PMID:12133857   PMID:12142021   PMID:12176733   PMID:12225952   PMID:12361974  
PMID:12477932   PMID:12573987   PMID:12718980   PMID:12799072   PMID:12829715   PMID:12829717   PMID:12885771   PMID:14645847   PMID:14766755   PMID:15005800   PMID:15016731   PMID:15105378  
PMID:15162506   PMID:15169678   PMID:15186480   PMID:15355863   PMID:15452354   PMID:15459176   PMID:15580568   PMID:15632069   PMID:15668254   PMID:15677768   PMID:15716345   PMID:15778712  
PMID:16024816   PMID:16157679   PMID:16166744   PMID:16214823   PMID:16365435   PMID:16630564   PMID:16632521   PMID:16691571   PMID:16959842   PMID:17000766   PMID:17121831   PMID:17142808  
PMID:17164424   PMID:17428829   PMID:17438133   PMID:17464327   PMID:17540762   PMID:17560563   PMID:17670744   PMID:18097062   PMID:18258849   PMID:18324732   PMID:18358466   PMID:18374910  
PMID:18536717   PMID:19096034   PMID:19131640   PMID:19202005   PMID:19204410   PMID:19299468   PMID:19906647   PMID:20007532   PMID:20060823   PMID:20147383   PMID:20228843   PMID:20303366  
PMID:20407208   PMID:20530543   PMID:20662086   PMID:21129374   PMID:21270055   PMID:21317380   PMID:21350014   PMID:21385574   PMID:21408140   PMID:21438071   PMID:21482757   PMID:21513708  
PMID:21704616   PMID:21777626   PMID:21865055   PMID:21873635   PMID:22001906   PMID:22096492   PMID:22159717   PMID:22331706   PMID:22493501   PMID:22916088   PMID:23063659   PMID:23143994  
PMID:23293024   PMID:23405202   PMID:23408915   PMID:23526992   PMID:23590297   PMID:23590306   PMID:23620511   PMID:23637629   PMID:23696835   PMID:23895934   PMID:23922714   PMID:23980576  
PMID:24058167   PMID:24164893   PMID:24191021   PMID:24499815   PMID:24591256   PMID:24733830   PMID:24785085   PMID:25079229   PMID:25220458   PMID:25516972   PMID:25912685   PMID:25965346  
PMID:25965799   PMID:26098214   PMID:26235626   PMID:26252542   PMID:26443822   PMID:26620227   PMID:26816051   PMID:26921474   PMID:26984772   PMID:27106761   PMID:27121020   PMID:27141870  
PMID:27190064   PMID:27645581   PMID:27770432   PMID:28314106   PMID:28346423   PMID:28546511   PMID:28743125   PMID:28746823   PMID:28811219   PMID:28838957   PMID:28839101   PMID:29083321  
PMID:29672221   PMID:29997285   PMID:30389914   PMID:30566624   PMID:30944105   PMID:31067462   PMID:31240265   PMID:31242446   PMID:31480246   PMID:31562139   PMID:31582725   PMID:33153107  
PMID:33242393   PMID:33296658  


Genomics

Comparative Map Data
Sftpb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39672,281,594 - 72,291,356 (+)NCBIGRCm39mm39
GRCm39 Ensembl672,281,594 - 72,291,354 (+)Ensembl
GRCm38672,304,610 - 72,314,373 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl672,304,610 - 72,314,371 (+)EnsemblGRCm38mm10GRCm38
MGSCv37672,253,239 - 72,264,364 (+)NCBIGRCm37mm9NCBIm37
MGSCv36672,232,754 - 72,243,879 (+)NCBImm8
Celera674,392,942 - 74,404,491 (+)NCBICelera
Cytogenetic Map6C1NCBI
cM Map632.27NCBI
SFTPB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl285,657,314 - 85,668,741 (-)EnsemblGRCh38hg38GRCh38
GRCh38285,657,307 - 85,668,741 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37285,884,430 - 85,895,864 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36285,737,951 - 85,748,823 (-)NCBINCBI36hg18NCBI36
Build 34285,796,098 - 85,806,970NCBI
Celera285,712,739 - 85,724,163 (-)NCBI
Cytogenetic Map2p11.2NCBI
HuRef285,781,765 - 85,793,199 (-)NCBIHuRef
CHM1_1285,814,217 - 85,825,673 (-)NCBICHM1_1
Sftpb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24104,359,303 - 104,368,439 (+)NCBI
Rnor_6.0 Ensembl4100,166,863 - 100,175,938 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04100,166,855 - 100,175,941 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04164,937,638 - 164,946,703 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44105,609,410 - 105,618,452 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14105,853,890 - 105,862,933 (+)NCBI
Celera493,513,449 - 93,522,486 (+)NCBICelera
RH 3.4 Map4631.95RGD
Cytogenetic Map4q31NCBI
Sftpb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554241,849,314 - 1,858,087 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554241,849,313 - 1,858,087 (+)NCBIChiLan1.0ChiLan1.0
SFTPB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A87,257,244 - 87,268,332 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A87,257,244 - 87,268,332 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A85,708,485 - 85,718,120 (-)NCBIMhudiblu_PPA_v0panPan3
SFTPB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1739,386,584 - 39,426,229 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11739,419,305 - 39,428,513 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Sftpb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049367121,614,979 - 1,621,207 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SFTPB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl359,101,952 - 59,111,834 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1359,101,940 - 59,113,442 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2361,901,846 - 61,913,549 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SFTPB
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11421,487,424 - 21,497,491 (+)NCBI
ChlSab1.1 Ensembl1421,488,387 - 21,499,850 (+)Ensembl
Sftpb
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474917,486,483 - 17,495,822 (+)NCBI

Position Markers
AI562151  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38672,310,642 - 72,310,738UniSTSGRCm38
MGSCv37672,260,636 - 72,260,732UniSTSGRCm37
Celera674,400,763 - 74,400,859UniSTS
Cytogenetic Map6C1UniSTS
cM Map631.0UniSTS
Whitehead/MRC_RH6718.65UniSTS
Sftpb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6C1UniSTS
cM Map632.27UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
12910802Pwbwq12_mpost-weaning body weight QTL 12 (mouse)64382681377811523Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
12910785Pwgrq16_mpost-weaning growth rate QTL 16 (mouse)64382681377811523Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62500000080000000Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7132262186275719Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
12910807Pwbwq11_mpost-weaning body weight QTL 11 (mouse)64382681377811523Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080600000Mouse
12910820Ogrq3_moverall growth rate QTL 3 (mouse)64382681377811523Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414873387692Mouse
4140983Srilp_msleep response to influenza, light phase (mouse)Not determined4872655675447710Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3285065078238974Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
11040601Lmr4a_mleishmaniasis resistance 4a (mouse)64211637376116515Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
11040600Lmr4c_mleishmaniasis resistance 4c (mouse)64211637376116515Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
12880424V25Dq4_mvitamin D inactive form serum level QTL 4 (mouse)64160000075600000Mouse
11533915Mts4_mmammary tumor susceptibility 4 (mouse)64211637376116515Mouse
1301266Lmr4_mleishmaniasis resistance 4 (mouse)Not determined64211637376116515Mouse
12910798Pwgrq5_mpre-weaning growth rate QTL 5 (mouse)64382681377811523Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65117915085179300Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
12910809Pwbwq10_mpost-weaning body weight QTL 10 (mouse)64382681377811523Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:957
Count of miRNA genes:432
Interacting mature miRNAs:478
Transcripts:ENSMUST00000070437, ENSMUST00000182014, ENSMUST00000182765, ENSMUST00000183018, ENSMUST00000183278
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000070437   ⟹   ENSMUSP00000066805
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,304,625 - 72,312,932 (+)Ensembl
RefSeq Acc Id: ENSMUST00000182014   ⟹   ENSMUSP00000138204
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,304,620 - 72,314,367 (+)Ensembl
RefSeq Acc Id: ENSMUST00000182765
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,306,406 - 72,314,045 (+)Ensembl
RefSeq Acc Id: ENSMUST00000183018   ⟹   ENSMUSP00000138695
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,304,610 - 72,314,371 (+)Ensembl
RefSeq Acc Id: ENSMUST00000183278   ⟹   ENSMUSP00000138485
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,304,625 - 72,312,932 (+)Ensembl
RefSeq Acc Id: ENSMUST00000239526
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl672,287,563 - 72,289,915 (+)Ensembl
RefSeq Acc Id: NM_001282071   ⟹   NP_001269000
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,281,594 - 72,291,356 (+)NCBI
GRCm38672,304,610 - 72,314,373 (+)NCBI
Celera674,394,309 - 74,404,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_147779   ⟹   NP_680088
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,281,594 - 72,291,356 (+)NCBI
GRCm38672,304,610 - 72,314,373 (+)NCBI
MGSCv37672,253,239 - 72,264,364 (+)RGD
Celera674,394,309 - 74,404,494 (+)NCBI
cM Map6 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001269000 (Get FASTA)   NCBI Sequence Viewer  
  NP_680088 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB34846 (Get FASTA)   NCBI Sequence Viewer  
  EDK98964 (Get FASTA)   NCBI Sequence Viewer  
  P50405 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_680088   ⟸   NM_147779
- Peptide Label: isoform 1 precursor
- UniProtKB: P50405 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001269000   ⟸   NM_001282071
- Peptide Label: isoform 2 precursor
- UniProtKB: S4R2L6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000138695   ⟸   ENSMUST00000183018
RefSeq Acc Id: ENSMUSP00000138485   ⟸   ENSMUST00000183278
RefSeq Acc Id: ENSMUSP00000066805   ⟸   ENSMUST00000070437
RefSeq Acc Id: ENSMUSP00000138204   ⟸   ENSMUST00000182014
Protein Domains
Saposin A-type   Saposin B-type

Promoters
RGD ID:6839977
Promoter ID:MM_KWN:46447
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:ENSMUST00000114105,   NM_147779,   NM_147779_SFTPB,   UC009CID.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36672,252,481 - 72,252,981 (+)MPROMDB
RGD ID:6839976
Promoter ID:MM_KWN:46448
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:ENSMUST00000070437
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36672,254,651 - 72,255,151 (+)MPROMDB
RGD ID:6839978
Promoter ID:MM_KWN:46449
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:UC009CIE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36672,256,439 - 72,256,939 (+)MPROMDB
RGD ID:6848035
Promoter ID:MM_ACW:41597
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   MEF_B6
Transcripts:SFTPB.CSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36672,259,751 - 72,260,852 (+)MPROMDB
RGD ID:6890004
Promoter ID:EPDNEW_M8453
Type:multiple initiation site
Name:Sftpb_1
Description:Mus musculus surfactant associated protein B , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38672,304,610 - 72,304,670EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109516 AgrOrtholog
Ensembl Genes ENSMUSG00000056370 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSG00000103879 UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000066805 UniProtKB/TrEMBL
  ENSMUSP00000138204 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000138485 UniProtKB/TrEMBL
  ENSMUSP00000138695 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000141551 UniProtKB/Swiss-Prot
  ENSMUSP00000155676 UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000070437 UniProtKB/TrEMBL
  ENSMUST00000182014 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000183018 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000183278 UniProtKB/TrEMBL
  ENSMUST00000192630 UniProtKB/Swiss-Prot
  ENSMUST00000231123 UniProtKB/Swiss-Prot
InterPro SAP_A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SapB_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SapB_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Saposin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Saposin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SaposinB_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20388 UniProtKB/Swiss-Prot
MGD MGI:109516 ENTREZGENE
NCBI Gene 20388 ENTREZGENE
Pfam SapA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SapB_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SapB_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Sftpb PhenoGen
PRINTS SAPOSIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SAP_A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAP_B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SAPA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SapB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47862 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt F8WGK6_MOUSE UniProtKB/TrEMBL
  P50405 ENTREZGENE, UniProtKB/Swiss-Prot
  S4R239_MOUSE UniProtKB/TrEMBL
  S4R2L6 ENTREZGENE, UniProtKB/TrEMBL