Tomm70a (translocase of outer mitochondrial membrane 70A) - Rat Genome Database

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Gene: Tomm70a (translocase of outer mitochondrial membrane 70A) Mus musculus
Analyze
Symbol: Tomm70a
Name: translocase of outer mitochondrial membrane 70A
RGD ID: 1551718
MGI Page MGI
Description: Predicted to enable mitochondrion targeting sequence binding activity and molecular adaptor activity. Predicted to contribute to protein transmembrane transporter activity. Predicted to be involved in several processes, including cellular response to virus; protein targeting to mitochondrion; and regulation of defense response. Located in mitochondrion. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human TOMM70 (translocase of outer mitochondrial membrane 70).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 2610044B22Rik; D16Ium2; D16Ium22; D16Ium22e; D16Wsu109; D16Wsu109e; mitochondrial import receptor subunit TOM70; mitochondrial precursor proteins import receptor; mKIAA0719; Tom7; Tom70; Tomm7; Tomm70; translocase of outer membrane 70 kDa subunit; translocase of outer mitochondrial membrane 70 homolog A; translocase of outer mitochondrial membrane 70 homolog A (yeast); translocase of outer mitochondrial membrane protein 70
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391656,942,077 - 56,974,893 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1656,942,066 - 56,977,068 (+)EnsemblGRCm39 Ensembl
GRCm381657,121,714 - 57,154,530 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1657,121,703 - 57,156,705 (+)EnsemblGRCm38mm10GRCm38
MGSCv371657,121,827 - 57,154,643 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361657,043,073 - 57,075,889 (+)NCBIMGSCv36mm8
Celera1657,455,013 - 57,487,868 (+)NCBICelera
Cytogenetic Map16C1.1NCBI
cM Map1634.22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tomm70aMouseCardiomegaly  ISOTomm70 (Rattus norvegicus)13464131protein:decreased expression:left ventricle myocardium RGD 
Tomm70aMouseCardiomegaly  IEP 13464131protein:decreased expression:heartRGD 
Tomm70aMousecongestive heart failure  ISOTomm70 (Rattus norvegicus)13464132protein:increased serine phosphorylation:heart and mitochondrionRGD 
Tomm70aMousecongestive heart failure  ISOTOMM70 (Homo sapiens)13464131mRNA:decreased expression:heartRGD 
Tomm70aMouseExperimental Diabetes Mellitus  ISOTomm70 (Rattus norvegicus)13463486protein:decreased expression:retinaRGD 
Tomm70aMousehypothyroidism  ISOTomm70 (Rattus norvegicus)11522362mRNA:increased expression:striatumRGD 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tomm70aMousegenetic disease  ISOTOMM70 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tomm70aMouse(1->4)-beta-D-glucan multiple interactionsEXP 6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of TOMM70A mRNACTDPMID:36331819
Tomm70aMouse(S)-nicotine increases expressionEXP 6480464Nicotine results in increased expression of TOMM70A mRNACTDPMID:21955143
Tomm70aMouse1,2-dichloroethane decreases expressionEXP 6480464ethylene dichloride results in decreased expression of TOMM70A mRNACTDPMID:28960355
Tomm70aMouse1,2-dimethylhydrazine decreases expressionEXP 64804641 and 2-Dimethylhydrazine results in decreased expression of TOMM70A mRNACTDPMID:22206623
Tomm70aMouse1,2-dimethylhydrazine multiple interactionsEXP 6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of TOMM70A mRNACTDPMID:22206623
Tomm70aMouse17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of TOMM70A mRNACTDPMID:17942748
Tomm70aMouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of TOMM70A mRNACTDPMID:17942748
Tomm70aMouse17beta-estradiol multiple interactionsISOTOMM70 (Homo sapiens)6480464Estradiol promotes the reaction [TOMM70A protein binds to ESR1 protein]CTDPMID:27156127
Tomm70aMouse17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of TOMM70A mRNACTDPMID:39298647
Tomm70aMouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of TOMM70A mRNACTDPMID:17942748
Tomm70aMouse2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of TOMM70A mRNACTDPMID:17942748
Tomm70aMouse2,4-dinitrotoluene affects expressionISOTomm70 (Rattus norvegicus)64804642 and 4-dinitrotoluene affects the expression of TOMM70 mRNACTDPMID:21346803
Tomm70aMouse2,6-dinitrotoluene affects expressionISOTomm70 (Rattus norvegicus)64804642 and 6-dinitrotoluene affects the expression of TOMM70 mRNACTDPMID:21346803
Tomm70aMouse3-chloropropane-1,2-diol increases expressionISOTomm70 (Rattus norvegicus)6480464alpha-Chlorohydrin results in increased expression of TOMM70 proteinCTDPMID:34915118
Tomm70aMouse4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of TOMM70A mRNACTDPMID:39298647
Tomm70aMouseacetamide decreases expressionISOTomm70 (Rattus norvegicus)6480464acetamide results in decreased expression of TOMM70 mRNACTDPMID:31881176
Tomm70aMouseaflatoxin B1 decreases expressionEXP 6480464Aflatoxin B1 results in decreased expression of TOMM70A mRNACTDPMID:19770486
Tomm70aMouseaflatoxin B1 decreases methylationISOTOMM70 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of TOMM70A geneCTDPMID:27153756
Tomm70aMouseall-trans-retinoic acid decreases expressionEXP 6480464Tretinoin results in decreased expression of TOMM70A mRNACTDPMID:16169686
Tomm70aMouseall-trans-retinoic acid decreases expressionISOTOMM70 (Homo sapiens)6480464Tretinoin results in decreased expression of TOMM70A mRNACTDPMID:33167477

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Biological Process
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tomm70aMouseactivation of innate immune response involved_inISSUniProtKB:O948262290270 UniProtGO_REF:0000024
Tomm70aMouseactivation of innate immune response involved_inISOUniProtKB:O948262290270 GO_CentralGO_REF:0000119
Tomm70aMousecellular response to virus involved_inISSUniProtKB:O948262290270 UniProtGO_REF:0000024
Tomm70aMousecellular response to virus involved_inISOUniProtKB:O948262290270 GO_CentralGO_REF:0000119
Tomm70aMousenegative regulation of cell growth involved in cardiac muscle cell development  ISOTomm70 (Rattus norvegicus)9068941 RGDPMID:25022898 and REF_RGD_ID:13464131
Tomm70aMousenegative regulation of cell growth involved in cardiac muscle cell development involved_inIEAUniProtKB:Q75Q39 and ensembl:ENSRNOP000000022382290270 EnsemblGO_REF:0000107
Tomm70aMousenegative regulation of cell growth involved in cardiac muscle cell development involved_inISOTomm70 (Rattus norvegicus)2290270 GO_CentralGO_REF:0000096
Tomm70aMousepositive regulation of defense response to virus by host involved_inISOUniProtKB:O948262290270 GO_CentralGO_REF:0000119
Tomm70aMousepositive regulation of defense response to virus by host involved_inISSUniProtKB:O948262290270 UniProtGO_REF:0000024
Tomm70aMousepositive regulation of interferon-beta production involved_inISOUniProtKB:O948262290270 GO_CentralGO_REF:0000119
Tomm70aMousepositive regulation of interferon-beta production involved_inISSUniProtKB:O948262290270 UniProtGO_REF:0000024
Tomm70aMousepositive regulation of protein targeting to mitochondrion  ISOTomm70 (Rattus norvegicus)9068941 RGDPMID:11956321 and REF_RGD_ID:1303951
Tomm70aMousepositive regulation of protein targeting to mitochondrion involved_inIEAUniProtKB:Q75Q39 and ensembl:ENSRNOP000000022382290270 EnsemblGO_REF:0000107
Tomm70aMousepositive regulation of protein targeting to mitochondrion involved_inISOTomm70 (Rattus norvegicus)2290270 GO_CentralGO_REF:0000096
Tomm70aMouseprotein import into mitochondrial matrix involved_inIBAPANTHER:PTN002340064 and SGD:S0000050652290270 GO_CentralGO_REF:0000033
Tomm70aMouseprotein insertion into mitochondrial inner membrane involved_inIBAPANTHER:PTN002340064 and SGD:S0000050652290270 GO_CentralGO_REF:0000033
Tomm70aMouseprotein targeting to mitochondrion involved_inIEAUniProtKB:Q75Q39 and ensembl:ENSRNOP000000022382290270 EnsemblGO_REF:0000107
Tomm70aMouseprotein targeting to mitochondrion involved_inISOTomm70 (Rattus norvegicus)2290270 GO_CentralGO_REF:0000096
Tomm70aMouseregulation of apoptotic process involved_inISSUniProtKB:O948262290270 UniProtGO_REF:0000024
Tomm70aMouseregulation of apoptotic process involved_inISOUniProtKB:O948262290270 GO_CentralGO_REF:0000119
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Cellular Component

  
Object Symbol
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Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tomm70aMousemitochondrial membrane is_active_inISOUniProtKB:O948262290270 GO_CentralGO_REF:0000119
Tomm70aMousemitochondrial outer membrane located_inISOTomm70 (Rattus norvegicus)2290270 GO_CentralGO_REF:0000096
Tomm70aMousemitochondrial outer membrane located_inIEAUniProtKB-SubCell:SL-01722290270 UniProtGO_REF:0000044
Tomm70aMousemitochondrial outer membrane  ISOTomm70 (Rattus norvegicus)9068941 RGDPMID:11956321 and REF_RGD_ID:1303951
Tomm70aMousemitochondrial outer membrane is_active_inIBAPANTHER:PTN002340064 more ...2290270 GO_CentralGO_REF:0000033
Tomm70aMousemitochondrion located_inIDA 2290270 PMID:23303939MGIPMID:23303939
Tomm70aMousemitochondrion located_inHDA 2290270 PMID:14651853 and PMID:18614015MGIPMID:14651853 and PMID:18614015
Tomm70aMousemitochondrion located_inISOUniProtKB:O948262290270 PMID:20531390GO_CentralGO_REF:0000119 and PMID:20531390

Molecular Function

  

RGD Manual Annotations


  
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Reference Title
Reference Citation
1. Identification of a mammalian homologue of the fungal Tom70 mitochondrial precursor protein import receptor as a thyroid hormone-regulated gene in specific brain regions. Alvarez-Dolado M, etal., J Neurochem. 1999 Dec;73(6):2240-9.
2. Biogenesis of mitochondrial outer membrane proteins, problems and diseases. Ellenrieder L, etal., Biol Chem. 2015 Oct 1;396(11):1199-213. doi: 10.1515/hsz-2015-0170.
3. Phosphoproteome mapping of cardiomyocyte mitochondria in a rat model of heart failure. Giorgianni F, etal., Mol Cell Biochem. 2014 Apr;389(1-2):159-67. doi: 10.1007/s11010-013-1937-7. Epub 2014 Jan 7.
4. Assembly of beta-barrel proteins in the mitochondrial outer membrane. Hohr AI, etal., Biochim Biophys Acta. 2015 Jan;1853(1):74-88. doi: 10.1016/j.bbamcr.2014.10.006. Epub 2014 Oct 8.
5. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
6. Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Ko MS, etal., Hum Mol Genet 1998 Nov;7(12):1967-78.
7. Tom70 serves as a molecular switch to determine pathological cardiac hypertrophy. Li J, etal., Cell Res. 2014 Aug;24(8):977-93. doi: 10.1038/cr.2014.94. Epub 2014 Jul 15.
8. MGDs mouse GO annotations MGD data from the GO Consortium
9. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40.
10. Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Feb 28;10(1):35-48.
11. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
12. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
13. Impaired transport of mitochondrial transcription factor A (TFAM) and the metabolic memory phenomenon associated with the progression of diabetic retinopathy. Santos JM and Kowluru RA, Diabetes Metab Res Rev. 2013 Mar;29(3):204-13. doi: 10.1002/dmrr.2384.
14. Unlocking the presequence import pathway. Schulz C, etal., Trends Cell Biol. 2015 May;25(5):265-75. doi: 10.1016/j.tcb.2014.12.001. Epub 2014 Dec 23.
15. Cooperation of protein machineries in mitochondrial protein sorting. Wenz LS, etal., Biochim Biophys Acta. 2015 May;1853(5):1119-29. doi: 10.1016/j.bbamcr.2015.01.012. Epub 2015 Jan 26.
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PMID:8858343   PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12904583   PMID:14610273   PMID:14681479   PMID:15102471  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16822835   PMID:17208939   PMID:17967808   PMID:18614015   PMID:18669640   PMID:18799693   PMID:19578372   PMID:20531390   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:21984432   PMID:22794259   PMID:23303939   PMID:23472196   PMID:24457600   PMID:25737280   PMID:27706848   PMID:28130547   PMID:28378742   PMID:28703803  
PMID:29222160   PMID:29395920   PMID:30457570   PMID:30562941   PMID:32325033   PMID:32724135   PMID:35025629   PMID:35449600   PMID:37142655   PMID:38093274   PMID:38355793   PMID:40025034  



Tomm70a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391656,942,077 - 56,974,893 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1656,942,066 - 56,977,068 (+)EnsemblGRCm39 Ensembl
GRCm381657,121,714 - 57,154,530 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1657,121,703 - 57,156,705 (+)EnsemblGRCm38mm10GRCm38
MGSCv371657,121,827 - 57,154,643 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361657,043,073 - 57,075,889 (+)NCBIMGSCv36mm8
Celera1657,455,013 - 57,487,868 (+)NCBICelera
Cytogenetic Map16C1.1NCBI
cM Map1634.22NCBI
TOMM70
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383100,363,431 - 100,401,089 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3100,363,431 - 100,401,089 (-)EnsemblGRCh38hg38GRCh38
GRCh373100,082,275 - 100,119,933 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363101,564,997 - 101,602,915 (-)NCBINCBI36Build 36hg18NCBI36
Build 343101,564,998 - 101,602,915NCBI
Celera398,473,164 - 98,511,084 (-)NCBICelera
Cytogenetic Map3q12.2NCBI
HuRef397,450,096 - 97,488,049 (-)NCBIHuRef
CHM1_13100,045,331 - 100,083,272 (-)NCBICHM1_1
T2T-CHM13v2.03103,068,774 - 103,106,448 (-)NCBIT2T-CHM13v2.0
Tomm70
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81156,847,837 - 56,886,302 (-)NCBIGRCr8
mRatBN7.21143,378,719 - 43,417,166 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1143,377,216 - 43,417,202 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1152,153,913 - 52,192,339 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01144,815,517 - 44,853,943 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01143,939,611 - 43,978,037 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01145,477,053 - 45,511,409 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1145,480,250 - 45,510,961 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01148,669,804 - 48,706,365 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41144,302,535 - 44,341,250 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11144,360,417 - 44,398,702 (-)NCBI
Celera1143,168,344 - 43,206,551 (-)NCBICelera
Cytogenetic Map11q12NCBI
Tomm70
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554271,876,222 - 1,908,737 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554271,874,277 - 1,908,245 (-)NCBIChiLan1.0ChiLan1.0
TOMM70
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2298,306,633 - 98,344,497 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1398,311,415 - 98,348,981 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0397,459,180 - 97,497,175 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13104,139,473 - 104,177,061 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3104,139,473 - 104,178,074 (-)Ensemblpanpan1.1panPan2
TOMM70
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1336,976,322 - 7,009,618 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl336,976,934 - 7,009,594 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha337,130,612 - 7,165,083 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0337,114,093 - 7,148,576 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl337,114,753 - 7,148,568 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1337,001,694 - 7,036,139 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0337,050,040 - 7,084,498 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0337,379,916 - 7,414,382 (-)NCBIUU_Cfam_GSD_1.0
Tomm70
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602150,008,687 - 150,042,592 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366302,906,581 - 2,940,608 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366302,906,573 - 2,938,837 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TOMM70
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13158,577,379 - 158,628,262 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113158,577,026 - 158,629,878 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213168,193,917 - 168,218,856 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TOMM70
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12280,477,429 - 80,516,536 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2280,477,872 - 80,516,670 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604186,056,352 - 86,094,501 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tomm70
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478913,792,049 - 13,829,104 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478913,792,434 - 13,828,403 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Tomm70a
991 total Variants

Predicted Target Of
Summary Value
Count of predictions:414
Count of miRNA genes:325
Interacting mature miRNAs:351
Transcripts:ENSMUST00000166897
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


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The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162879281362792952Mouse
1301138Pcd4ts3_mp-glycoprotein positive CD4 T cell subset 3 (mouse)Not determined164059392374594076Mouse
1301394Eae11_msusceptibility to experimental allergic encephalomyelitis 11 (mouse)Not determined165356189187562035Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
4141179Ipng3_mimprinted postnatal growth 3 (mouse)Not determined2277525257594076Mouse
1301719Remslp3_mrapid eye movement sleep 3 (mouse)Not determined164438335078383506Mouse
1357778Diobq_mdiet-induced obesity QTL (mouse)Not determined164219781782331174Mouse
14696806Smcl1_msmoke-mediated chord length 1 (mouse)165401530958330871Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16381786464620363Mouse

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Tomm70a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16C1.1UniSTS
RH125842  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381657,152,725 - 57,152,974UniSTSGRCm38
MGSCv371657,152,838 - 57,153,087UniSTSGRCm37
Celera1657,486,066 - 57,486,315UniSTS
Cytogenetic Map16C1.1UniSTS
cM Map1636.9UniSTS
cM Map1638.0UniSTS
Whitehead/MRC_RH16597.84UniSTS






1 to 25 of 25 rows
RefSeq Transcripts NM_138599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC139420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC139421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 25 of 25 rows

Ensembl Acc Id: ENSMUST00000166897   ⟹   ENSMUSP00000129186
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1656,942,066 - 56,977,068 (+)Ensembl
GRCm38.p6 Ensembl1657,121,703 - 57,156,705 (+)Ensembl
Ensembl Acc Id: ENSMUST00000231298
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1656,957,861 - 56,962,030 (+)Ensembl
GRCm38.p6 Ensembl1657,137,498 - 57,141,667 (+)Ensembl
Ensembl Acc Id: ENSMUST00000231901
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1656,973,623 - 56,976,248 (+)Ensembl
GRCm38.p6 Ensembl1657,153,260 - 57,155,885 (+)Ensembl
RefSeq Acc Id: NM_138599   ⟹   NP_613065
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391656,942,077 - 56,974,893 (+)NCBI
GRCm381657,121,714 - 57,154,530 (+)ENTREZGENE
MGSCv371657,121,827 - 57,154,643 (+)RGD
Celera1657,455,013 - 57,487,868 (+)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_613065   ⟸   NM_138599
- UniProtKB: Q8BNI6 (UniProtKB/Swiss-Prot),   Q9CZW5 (UniProtKB/Swiss-Prot),   Q3TSX8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000129186   ⟸   ENSMUST00000166897

Name Modeler Protein Id AA Range Protein Structure
AF-Q9CZW5-F1-model_v2 AlphaFold Q9CZW5 1-611 view protein structure

RGD ID:6827581
Promoter ID:MM_KWN:21273
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000023433
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361657,121,341 - 57,122,312 (+)MPROMDB
RGD ID:8686398
Promoter ID:EPDNEW_M21229
Type:initiation region
Name:Tomm70a_1
Description:Mus musculus translocase of outer mitochondrial membrane 70A, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381657,121,735 - 57,121,795EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000022752 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000166897 ENTREZGENE
  ENSMUST00000166897.3 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot
InterPro TPR-like_helical_dom_sf UniProtKB/Swiss-Prot
  TPR_repeat UniProtKB/Swiss-Prot
KEGG Report mmu:28185 UniProtKB/Swiss-Prot
MGD MGI:106295 ENTREZGENE
NCBI Gene 28185 ENTREZGENE
PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70 UniProtKB/Swiss-Prot
  MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70 UniProtKB/Swiss-Prot
Pfam TPR_1 UniProtKB/Swiss-Prot
  TPR_6 UniProtKB/Swiss-Prot
  TPR_8 UniProtKB/Swiss-Prot
PhenoGen Tomm70a PhenoGen
PROSITE TPR UniProtKB/Swiss-Prot
  TPR_REGION UniProtKB/Swiss-Prot
SMART TPR UniProtKB/Swiss-Prot
Superfamily-SCOP Protein prenylyltransferase UniProtKB/Swiss-Prot
  SSF48452 UniProtKB/Swiss-Prot
UniProt Q3TSX8 ENTREZGENE, UniProtKB/TrEMBL
  Q80TT4_MOUSE UniProtKB/TrEMBL
  Q8BNI6 ENTREZGENE
  Q9CZW5 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8BNI6 UniProtKB/Swiss-Prot
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-03-27 Tomm70a  translocase of outer mitochondrial membrane 70A    translocase of outer mitochondrial membrane 70 homolog A (yeast)  Symbol and/or name change 5135510 APPROVED