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Gene: TOMM70 (translocase of outer mitochondrial membrane 70) Canis lupus familiaris

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Symbol:

TOMM70

Name:

translocase of outer mitochondrial membrane 70

RGD ID:

12260644

Description:

ENCODES a protein that exhibits molecular adaptor activity (inferred); INVOLVED IN negative regulation of cell growth involved in cardiac muscle cell development (ortholog); positive regulation of protein targeting to mitochondrion (ortholog); protein targeting to mitochondrion (ortholog); PARTICIPATES IN alpha-helical insertion pathway of mitochondrial protein import; beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

mitochondrial import receptor subunit TOM70

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	33	6,976,322 - 7,009,618 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	33	6,976,934 - 7,009,594 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	33	7,130,612 - 7,165,083 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	33	7,114,093 - 7,148,576 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	33	7,114,753 - 7,148,568 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	33	7,001,694 - 7,036,139 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	33	7,050,040 - 7,084,498 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	33	7,379,916 - 7,414,382 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Cardiomegaly (ISO)

congestive heart failure (ISO)

Experimental Diabetes Mellitus (ISO)

genetic disease (ISO)

hypothyroidism (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activation of innate immune response (IEA)

cellular response to virus (IEA)

negative regulation of cell growth involved in cardiac muscle cell development (ISO)

positive regulation of defense response to virus by host (IEA)

positive regulation of interferon-beta production (IEA)

positive regulation of protein targeting to mitochondrion (ISO)

protein targeting to mitochondrion (ISO)

regulation of apoptotic process (IEA)

response to thyroxine (ISO)

Cellular Component

mitochondrial membrane (IEA,ISO)

mitochondrial outer membrane (IEA,ISO)

mitochondrion (IEA)

Molecular Function

molecular adaptor activity (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

alpha-helical insertion pathway of mitochondrial protein import (ISO)

beta-barrel pathway of mitochondrial protein import (ISO)

carrier pathway of mitochondrial protein import (ISO)

presequence pathway of mitochondrial protein import (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

TOMM70
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	33	6,976,322 - 7,009,618 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	33	6,976,934 - 7,009,594 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	33	7,130,612 - 7,165,083 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	33	7,114,093 - 7,148,576 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	33	7,114,753 - 7,148,568 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	33	7,001,694 - 7,036,139 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	33	7,050,040 - 7,084,498 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	33	7,379,916 - 7,414,382 (-)	NCBI		UU_Cfam_GSD_1.0

TOMM70
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	100,363,431 - 100,401,089 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	100,363,431 - 100,401,089 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	100,082,275 - 100,119,933 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	101,564,997 - 101,602,915 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	101,564,998 - 101,602,915	NCBI
Celera	3	98,473,164 - 98,511,084 (-)	NCBI		Celera
Cytogenetic Map	3	q12.2	NCBI
HuRef	3	97,450,096 - 97,488,049 (-)	NCBI		HuRef
CHM1_1	3	100,045,331 - 100,083,272 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	103,068,774 - 103,106,448 (-)	NCBI		T2T-CHM13v2.0

Tomm70a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	56,942,077 - 56,974,893 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	56,942,066 - 56,977,068 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	57,121,714 - 57,154,530 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	57,121,703 - 57,156,705 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	57,121,827 - 57,154,643 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	57,043,073 - 57,075,889 (+)	NCBI		MGSCv36	mm8
Celera	16	57,455,013 - 57,487,868 (+)	NCBI		Celera
Cytogenetic Map	16	C1.1	NCBI
cM Map	16	34.22	NCBI

Tomm70
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	56,847,837 - 56,886,302 (-)	NCBI		GRCr8
mRatBN7.2	11	43,378,719 - 43,417,166 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	43,377,216 - 43,417,202 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	52,153,913 - 52,192,339 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	44,815,517 - 44,853,943 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	43,939,611 - 43,978,037 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	45,477,053 - 45,511,409 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	45,480,250 - 45,510,961 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	48,669,804 - 48,706,365 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	44,302,535 - 44,341,250 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	44,360,417 - 44,398,702 (-)	NCBI
Celera	11	43,168,344 - 43,206,551 (-)	NCBI		Celera
Cytogenetic Map	11	q12	NCBI

Tomm70
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955427	1,876,222 - 1,908,737 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955427	1,874,277 - 1,908,245 (-)	NCBI	ChiLan1.0	ChiLan1.0

TOMM70
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	98,306,633 - 98,344,497 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	98,311,415 - 98,348,981 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	97,459,180 - 97,497,175 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	104,139,473 - 104,177,061 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	104,139,473 - 104,178,074 (-)	Ensembl	panpan1.1		panPan2

Tomm70
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	150,008,687 - 150,042,592 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936630	2,906,581 - 2,940,608 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936630	2,906,573 - 2,938,837 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TOMM70
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	158,577,379 - 158,628,262 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	158,577,026 - 158,629,878 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	168,193,917 - 168,218,856 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TOMM70
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	80,477,429 - 80,516,536 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	80,477,872 - 80,516,670 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	86,056,352 - 86,094,501 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tomm70
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624789	13,792,049 - 13,829,104 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624789	13,792,434 - 13,828,403 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TOMM70
348 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022414015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038444742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038444743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038582602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038582603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038647024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038647025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_535719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005306196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005317120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005349261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005383207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005416855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000014803 ⟹ ENSCAFP00000013696

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	33	6,976,934 - 7,009,594 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000087460 ⟹ ENSCAFP00000050186

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	33	6,976,934 - 7,008,918 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845032540 ⟹ ENSCAFP00845025447

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	33	7,114,753 - 7,148,568 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845032640 ⟹ ENSCAFP00845025526

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	33	7,114,753 - 7,147,896 (-)	Ensembl

RefSeq Acc Id:

XM_022414015 ⟹ XP_022269723

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	33	6,976,322 - 7,009,616 (-)	NCBI
Dog10K_Boxer_Tasha	33	7,130,612 - 7,165,077 (-)	NCBI

Sequence:

show sequence

TTTTCTGTCGTCCGCTCCCGCTGCCTGGCGTGCTCGCTCGCTCGCCGCCTGCCTTCCCCCCTCC
GGTCCTCCTTCGCACGCTGCCTGGTGGCCGAGGCGCCCGCGAGCAGCGGGGAGGCGGTGGCGGA
GGACACCCGTCATGGCCGCCTCTAAGCCTGTGGAGGCGGCGGTGGTCGCCGCGGCTGCGCCCAG
CTCCGGGAGCGCGAACTCTCTTGATAGAGCCCAAGCAGCCAAGAACAAAGGCAACAAATATTTT
AAAGCAGGAAAATATGAACAAGCTATTCAGTGCTATACTGAGGCGATCAGTTTGTGCCCTATAG
AGAAGAACGCTGACCTTTCCACATTTTATCAAAACAGAGCTGCTGCCTTTGAACAGTTGCAAAA
ATGGAAAGAGGTGGCACAAGATTGTACAAAGGCTGTTGAACTTAATCCCAAATATGTGAAAGCT
CTCTTTAGACGTGCAAAAGCCCACGAGAAGCTAGACAATAAGAAGGAATGTTTAGAAGATGTCA
CTGCTGTGTGTATACTAGAAGGGTTCCAAAATCAACAAAGCATGCTGTTAGCTGATAAAGTTCT
TAAACTTCTTGGAAAAGAGAAAGCCAAAGAAAAATACAAGAATCGTGAACCTCTGATGCCATCT
CCACAGTTTATCAAATCTTACTTCAGTTCTTTCACGGACGATATAATTTCTCAGCCCATGCTTA
AAGGAGAGAAGTCTGATGAAGATAAAGACAAAGAAGGAGAAGCTTCAGAAGTTAAAGAAAATTC
TGGATATTTAAGGGCCAAACAGTATATGGAAGAAGAAAACTATGATAAAATAATAAGTGAATGC
TCAAAAGAGATAGATGCTCAAGGCAAATACATGGCAGAAGCATTATTACTACGAGCCACCTTCT
ACCTGCTTATTGGCAATGCCAATGCGGCCAAACCAGATTTAGATAAAGTCATCAGTTTGAAAGA
AGCTAATGTGAAGCTTCGAGCAAATGCTCTAATCAAAAGAGGCAGCATGTACATGCAACAGCAG
CAGCCTTTGCTGTCTACTCAGGATTTTAACATGGCTGCTGACATTGATCCTCAGAATGCAGATG
TTTATCACCACCGAGGACAGCTGAAAATATTACTCGATCAAGTTGAAGAAGCAGTGGCAGATTT
TGATGAATGTATTAGATTAAGACCTGAGTCCGCTCTGGCACAAGCTCAGAAATGTTTTGCCTTG
TATCGCCAGGCATATACTGGAAACAACTCTTCACAAATCCAAGCAGCTATGAAAGGTTTTGAAG
AGGTCATAAAGAAATTTCCAAGGTGTGCTGAAGGCTATGCACTATATGCTCAGGCATTAACAGA
TCAACAACAGTTTGGTAAAGCTGATGATATGTATGATAAATGTATTGATTTGGAACCAGATAAT
GCCACAACATATGTTCATAAAGGTTTACTTCAGCTTCAGTGGAAGCAAGATCTGGATAGAGGTT
TGGAGCTCATCAGCAAGGCTATTGAAATTGATAATAAATGTGATTTTGCATATGAAACCATGGG
AACTATTGAAGTGCAAAGAGGAAATATGGAGAAAGCCATTGACATGTTCAACAAAGCTATTAAC
CTGGCCAAATCGGAAATGGAGATGGCTCATCTATACTCACTCTGCGATGCTGCCCATGCGCAGA
CAGAAGTTGCAAAGAAATATGGATTAAAGCCACCAACGTTATAAAATAGGGAGAAAGAAGAATG
ACCCTCTTTTTAGAAGTTTACTCCCTTTTCAACTGAACCCTAAAGACACTGTCATGAACTGTGT
TGAATGGTGGAACTTAGTGTTTCTGTTTGTGCTGTTGTCATTCGTTACATGTTTCATGTTTAGG
TGTTGTGGGAGTGGCTGTTGAAGGAAGTTTGCAGTGTTGCAGCTTTTATTCCCTGTGCAACAAA
AGCTTAGAACCTGTTAAGGGATATTAAAGTTGCAGAGTACAGATGATAATTGGCCATGCAAATA
AAAACTTTGATTTGTTGATTTGGCTTTTTTTTTTTTTTTTTTTGGGAGTTGGGGGGTGGGTTAC
ATTCTGGATGATTTTGTGGGTGTGTGTGGGTGTGCGTGTAATATATGAGTATTTTACAGCATGT
TGGCTTTTAAATTAACATAGTAAGTGCTGTAAAACAGGTTTCTTTTAGATTCAATTAATCCCTT
TTAGTTTTTTTTTTTAGAAAACAAAACGTACGTGGGGATTTTGTTTTGAAGGCAGCAAAACAGA
CCCTGTAAACCGCTGTCAGCATGCCTGCAGAAGGTTAGATTCAGTGGAACTTAAGCCTTTTGGC
CCCGTTCAACTCCAGTGGATAATGTATGTTGTTCTTAAAAGTCCACCGCAGCTGGCTTTCATAC
AGTAAATCACACAGAAGCAAAATACTCTGGTGTATATGCTGGAAGACTGAAAATTAATGGGAGA
GCAAACCAGGCAAGAG

hide sequence

RefSeq Acc Id:

XM_038444742 ⟹ XP_038300670

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	33	7,114,093 - 7,148,576 (-)	NCBI

RefSeq Acc Id:

XM_038444743 ⟹ XP_038300671

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	33	7,114,093 - 7,148,569 (-)	NCBI

RefSeq Acc Id:

XM_038519068 ⟹ XP_038374996

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	33	7,001,694 - 7,036,139 (-)	NCBI

RefSeq Acc Id:

XM_038519069 ⟹ XP_038374997

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	33	7,001,694 - 7,036,132 (-)	NCBI

RefSeq Acc Id:

XM_038582602 ⟹ XP_038438530

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	33	7,379,916 - 7,414,382 (-)	NCBI

RefSeq Acc Id:

XM_038582603 ⟹ XP_038438531

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	33	7,379,916 - 7,414,375 (-)	NCBI

RefSeq Acc Id:

XM_038647024 ⟹ XP_038502952

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	33	7,050,040 - 7,084,498 (-)	NCBI

RefSeq Acc Id:

XM_038647025 ⟹ XP_038502953

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	33	7,050,040 - 7,084,491 (-)	NCBI

RefSeq Acc Id:

XM_535719 ⟹ XP_535719

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	33	6,976,322 - 7,009,618 (-)	NCBI
Dog10K_Boxer_Tasha	33	7,130,612 - 7,165,083 (-)	NCBI

Sequence:

show sequence

CCTTTTCTGTCGTCCGCTCCCGCTGCCTGGCGTGCTCGCTCGCTCGCCGCCTGCCTTCCCCCCT
CCGGTCCTCCTTCGCACGCTGCCTGGTGGCCGAGGCGCCCGCGAGCAGCGGGGAGGCGGTGGCG
GAGGACACCCGTCATGGCCGCCTCTAAGCCTGTGGAGGCGGCGGTGGTCGCCGCGGCTGCGCCC
AGCTCCGGGAGCGCGGTGGGTGGCGGCGGCGCGACCGCGGGCGCGGGTGCCGGGGGCCTGCCGC
GATGGCAGCTGGCGCTGGCGGTCGGGGCGCCCCTGCTGCTGGGCGCAGGTGCCATGTACCTGTG
GAGCCGGCAGAGGCGGCGGCGGGAGGCCGGGGGCCGCGGCGACGCCGGCGGCTTGAAGCGCAAC
AGCGAACGGAAGACCCCGGAGGGCAGGGCCAGCCCGGCCCCGGGCAGCGGACATCCCGAGGGCC
CCGGCGCTCACCTGGAAATGAACTCTCTTGATAGAGCCCAAGCAGCCAAGAACAAAGGCAACAA
ATATTTTAAAGCAGGAAAATATGAACAAGCTATTCAGTGCTATACTGAGGCGATCAGTTTGTGC
CCTATAGAGAAGAACGCTGACCTTTCCACATTTTATCAAAACAGAGCTGCTGCCTTTGAACAGT
TGCAAAAATGGAAAGAGGTGGCACAAGATTGTACAAAGGCTGTTGAACTTAATCCCAAATATGT
GAAAGCTCTCTTTAGACGTGCAAAAGCCCACGAGAAGCTAGACAATAAGAAGGAATGTTTAGAA
GATGTCACTGCTGTGTGTATACTAGAAGGGTTCCAAAATCAACAAAGCATGCTGTTAGCTGATA
AAGTTCTTAAACTTCTTGGAAAAGAGAAAGCCAAAGAAAAATACAAGAATCGTGAACCTCTGAT
GCCATCTCCACAGTTTATCAAATCTTACTTCAGTTCTTTCACGGACGATATAATTTCTCAGCCC
ATGCTTAAAGGAGAGAAGTCTGATGAAGATAAAGACAAAGAAGGAGAAGCTTCAGAAGTTAAAG
AAAATTCTGGATATTTAAGGGCCAAACAGTATATGGAAGAAGAAAACTATGATAAAATAATAAG
TGAATGCTCAAAAGAGATAGATGCTCAAGGCAAATACATGGCAGAAGCATTATTACTACGAGCC
ACCTTCTACCTGCTTATTGGCAATGCCAATGCGGCCAAACCAGATTTAGATAAAGTCATCAGTT
TGAAAGAAGCTAATGTGAAGCTTCGAGCAAATGCTCTAATCAAAAGAGGCAGCATGTACATGCA
ACAGCAGCAGCCTTTGCTGTCTACTCAGGATTTTAACATGGCTGCTGACATTGATCCTCAGAAT
GCAGATGTTTATCACCACCGAGGACAGCTGAAAATATTACTCGATCAAGTTGAAGAAGCAGTGG
CAGATTTTGATGAATGTATTAGATTAAGACCTGAGTCCGCTCTGGCACAAGCTCAGAAATGTTT
TGCCTTGTATCGCCAGGCATATACTGGAAACAACTCTTCACAAATCCAAGCAGCTATGAAAGGT
TTTGAAGAGGTCATAAAGAAATTTCCAAGGTGTGCTGAAGGCTATGCACTATATGCTCAGGCAT
TAACAGATCAACAACAGTTTGGTAAAGCTGATGATATGTATGATAAATGTATTGATTTGGAACC
AGATAATGCCACAACATATGTTCATAAAGGTTTACTTCAGCTTCAGTGGAAGCAAGATCTGGAT
AGAGGTTTGGAGCTCATCAGCAAGGCTATTGAAATTGATAATAAATGTGATTTTGCATATGAAA
CCATGGGAACTATTGAAGTGCAAAGAGGAAATATGGAGAAAGCCATTGACATGTTCAACAAAGC
TATTAACCTGGCCAAATCGGAAATGGAGATGGCTCATCTATACTCACTCTGCGATGCTGCCCAT
GCGCAGACAGAAGTTGCAAAGAAATATGGATTAAAGCCACCAACGTTATAAAATAGGGAGAAAG
AAGAATGACCCTCTTTTTAGAAGTTTACTCCCTTTTCAACTGAACCCTAAAGACACTGTCATGA
ACTGTGTTGAATGGTGGAACTTAGTGTTTCTGTTTGTGCTGTTGTCATTCGTTACATGTTTCAT
GTTTAGGTGTTGTGGGAGTGGCTGTTGAAGGAAGTTTGCAGTGTTGCAGCTTTTATTCCCTGTG
CAACAAAAGCTTAGAACCTGTTAAGGGATATTAAAGTTGCAGAGTACAGATGATAATTGGCCAT
GCAAATAAAAACTTTGATTTGTTGATTTGGCTTTTTTTTTTTTTTTTTTTGGGAGTTGGGGGGT
GGGTTACATTCTGGATGATTTTGTGGGTGTGTGTGGGTGTGCGTGTAATATATGAGTATTTTAC
AGCATGTTGGCTTTTAAATTAACATAGTAAGTGCTGTAAAACAGGTTTCTTTTAGATTCAATTA
ATCCCTTTTAGTTTTTTTTTTTAGAAAACAAAACGTACGTGGGGATTTTGTTTTGAAGGCAGCA
AAACAGACCCTGTAAACCGCTGTCAGCATGCCTGCAGAAGGTTAGATTCAGTGGAACTTAAGCC
TTTTGGCCCCGTTCAACTCCAGTGGATAATGTATGTTGTTCTTAAAAGTCCACCGCAGCTGGCT
TTCATACAGTAAATCACACAGAAGCAAAATACTCTGGTGTATATGCTGGAAGACTGAAAATTAA
TGGGAGAGCAAACCAGGCAAGAG

hide sequence

RefSeq Acc Id:

XR_005306196

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	33	7,114,093 - 7,148,576 (-)	NCBI

RefSeq Acc Id:

XR_005317120

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	33	7,130,612 - 7,165,083 (-)	NCBI

RefSeq Acc Id:

XR_005349261

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	33	7,001,694 - 7,036,139 (-)	NCBI

RefSeq Acc Id:

XR_005383207

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	33	7,379,916 - 7,414,382 (-)	NCBI

RefSeq Acc Id:

XR_005416855

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	33	7,050,040 - 7,084,498 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_022269723	(Get FASTA)	NCBI Sequence Viewer
	XP_038300670	(Get FASTA)	NCBI Sequence Viewer
	XP_038300671	(Get FASTA)	NCBI Sequence Viewer
	XP_038374996	(Get FASTA)	NCBI Sequence Viewer
	XP_038374997	(Get FASTA)	NCBI Sequence Viewer
	XP_038438530	(Get FASTA)	NCBI Sequence Viewer
	XP_038438531	(Get FASTA)	NCBI Sequence Viewer
	XP_038502952	(Get FASTA)	NCBI Sequence Viewer
	XP_038502953	(Get FASTA)	NCBI Sequence Viewer
	XP_535719	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000013696.4
	ENSCAFP00000050186.1
	ENSCAFP00030033739.1
	ENSCAFP00030033813.1
	ENSCAFP00040037294.1
	ENSCAFP00040037376.1
	ENSCAFP00845025447
	ENSCAFP00845025447.1
	ENSCAFP00845025526
	ENSCAFP00845025526.1

RefSeq Acc Id:	XP_535719 ⟸ XM_535719
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0K8N2 (UniProtKB/TrEMBL), A0A8C0P4G2 (UniProtKB/TrEMBL), A0A8I3P6B7 (UniProtKB/TrEMBL), A0A8C0TLQ3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAASKPVEAAVVAAAAPSSGSAVGGGGATAGAGAGGLPRWQLALAVGAPLLLGAGAMYLWSRQR RRREAGGRGDAGGLKRNSERKTPEGRASPAPGSGHPEGPGAHLEMNSLDRAQAAKNKGNKYFKA GKYEQAIQCYTEAISLCPIEKNADLSTFYQNRAAAFEQLQKWKEVAQDCTKAVELNPKYVKALF RRAKAHEKLDNKKECLEDVTAVCILEGFQNQQSMLLADKVLKLLGKEKAKEKYKNREPLMPSPQ FIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEASEVKENSGYLRAKQYMEEENYDKIISECSK EIDAQGKYMAEALLLRATFYLLIGNANAAKPDLDKVISLKEANVKLRANALIKRGSMYMQQQQP LLSTQDFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFALYR QAYTGNNSSQIQAAMKGFEEVIKKFPRCAEGYALYAQALTDQQQFGKADDMYDKCIDLEPDNAT TYVHKGLLQLQWKQDLDRGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLA KSEMEMAHLYSLCDAAHAQTEVAKKYGLKPPTL hide sequence

RefSeq Acc Id:	XP_022269723 ⟸ XM_022414015
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0THL1 (UniProtKB/TrEMBL), A0A8I3S0H1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAASKPVEAAVVAAAAPSSGSANSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPIEKNA DLSTFYQNRAAAFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAVC ILEGFQNQQSMLLADKVLKLLGKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEK SDEDKDKEGEASEVKENSGYLRAKQYMEEENYDKIISECSKEIDAQGKYMAEALLLRATFYLLI GNANAAKPDLDKVISLKEANVKLRANALIKRGSMYMQQQQPLLSTQDFNMAADIDPQNADVYHH RGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIK KFPRCAEGYALYAQALTDQQQFGKADDMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLELI SKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAHAQTEVA KKYGLKPPTL hide sequence

Ensembl Acc Id:

ENSCAFP00000050186 ⟸ ENSCAFT00000087460

Ensembl Acc Id:

ENSCAFP00000013696 ⟸ ENSCAFT00000014803

RefSeq Acc Id:	XP_038374996 ⟸ XM_038519068
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038374997 ⟸ XM_038519069
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038502952 ⟸ XM_038647024
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038502953 ⟸ XM_038647025
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038300670 ⟸ XM_038444742
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0K8N2 (UniProtKB/TrEMBL), A0A8C0P4G2 (UniProtKB/TrEMBL), A0A8I3P6B7 (UniProtKB/TrEMBL), A0A8C0TLQ3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038300671 ⟸ XM_038444743
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0THL1 (UniProtKB/TrEMBL), A0A8I3S0H1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038438530 ⟸ XM_038582602
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0K8N2 (UniProtKB/TrEMBL), A0A8C0P4G2 (UniProtKB/TrEMBL), A0A8C0TLQ3 (UniProtKB/TrEMBL), A0A8I3P6B7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038438531 ⟸ XM_038582603
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0THL1 (UniProtKB/TrEMBL), A0A8I3S0H1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845025526 ⟸ ENSCAFT00845032640

Ensembl Acc Id:

ENSCAFP00845025447 ⟸ ENSCAFT00845032540

Promoters

RGD ID:

13688779

Promoter ID:

EPDNEW_C6847

Type:

initiation region

Name:

TOMM70_1

Description:

translocase of outer mitochondrial membrane 70

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	33	7,009,610 - 7,009,670	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000009301	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030021043	UniProtKB/TrEMBL
	ENSCAFG00040023005	UniProtKB/TrEMBL
	ENSCAFG00845018398	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000014803.5	UniProtKB/TrEMBL
	ENSCAFT00000087460.2	UniProtKB/TrEMBL
	ENSCAFT00030038669.1	UniProtKB/TrEMBL
	ENSCAFT00030038767.1	UniProtKB/TrEMBL
	ENSCAFT00040042758.1	UniProtKB/TrEMBL
	ENSCAFT00040042841.1	UniProtKB/TrEMBL
	ENSCAFT00845032540	ENTREZGENE
	ENSCAFT00845032540.1	UniProtKB/TrEMBL
	ENSCAFT00845032640	ENTREZGENE
	ENSCAFT00845032640.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
InterPro	TPR-like_helical_dom_sf	UniProtKB/TrEMBL
	TPR_repeat	UniProtKB/TrEMBL
NCBI Gene	TOMM70	ENTREZGENE
PANTHER	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70	UniProtKB/TrEMBL
	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70	UniProtKB/TrEMBL
Pfam	TPR_1	UniProtKB/TrEMBL
	TPR_8	UniProtKB/TrEMBL
PROSITE	TPR	UniProtKB/TrEMBL
	TPR_REGION	UniProtKB/TrEMBL
SMART	TPR	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48452	UniProtKB/TrEMBL
UniProt	A0A8C0K8N2	ENTREZGENE
	A0A8C0P4G2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0THL1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TLQ3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P6B7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3S0H1	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:49630	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

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Imported Disease Annotations - ClinVar

RGD Manual Annotations