JAK3 (Janus kinase 3) - Rat Genome Database

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Gene: JAK3 (Janus kinase 3) Sus scrofa
Analyze
Symbol: JAK3
Name: Janus kinase 3
RGD ID: 14256575
Description: ENCODES a protein that exhibits ATP binding (inferred); growth hormone receptor binding (inferred); kinase activity (inferred); INVOLVED IN interleukin-4-mediated signaling pathway; negative regulation of complement-dependent cytotoxicity; B cell differentiation (ortholog); PARTICIPATES IN altered Jak-Stat signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Acute Lymphoblastic Leukemia, with Lymphomatous Features (ortholog); acute megakaryocytic leukemia (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: tyrosine-protein kinase JAK3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl259,905,919 - 59,926,495 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1259,905,901 - 59,926,504 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2259,475,346 - 59,495,932 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
Acute Lung Injury  (ISO)
Acute Lymphoblastic Leukemia, with Lymphomatous Features  (ISO)
acute megakaryocytic leukemia  (ISO)
adenoid cystic carcinoma  (ISO)
adenosine deaminase deficiency  (ISO)
adult T-cell leukemia/lymphoma  (ISO)
amyotrophic lateral sclerosis type 1  (ISO)
B-cell lymphoma  (ISO)
Cd4+ Lymphocyte Deficiency  (ISO)
cerebral malaria  (ISO)
Colonic Neoplasms  (ISO)
Edema  (ISO)
Experimental Arthritis  (ISO)
Experimental Autoimmune Encephalomyelitis  (ISO)
Experimental Diabetes Mellitus  (ISO)
genetic disease  (ISO)
graft-versus-host disease  (ISO)
hereditary spastic paraplegia  (ISO)
Hydrops Fetalis  (ISO)
Hyperalgesia  (ISO)
Hypoxia  (ISO)
juvenile myelomonocytic leukemia  (ISO)
Leukemoid Reaction  (ISO)
long QT syndrome  (ISO)
lymphopenia  (ISO)
Mediastinal Neoplasms  (ISO)
Megalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1  (ISO)
Muscle Hypotonia  (ISO)
myeloproliferative neoplasm  (ISO)
nasal type extranodal NK/T-cell lymphoma  (ISO)
NATURAL KILLER CELL ENTEROPATHY  (ISO)
severe combined immunodeficiency  (ISO)
severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive  (ISO)
Severe Combined Immunodeficiency, Autosomal Recessive, T Cell-Negative, B Cell-Positive, NK Cell-Negative  (ISO)
severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-positive, NK cell-positive  (ISO)
T-cell acute lymphoblastic leukemia  (ISO)
T-cell non-Hodgkin lymphoma  (ISO)
T-cell prolymphocytic leukemia  (ISO)
tongue squamous cell carcinoma  (ISO)
Trichiasis  (ISO)
Viral Bronchiolitis  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adaptive immune response  (IEA)
B cell differentiation  (ISO)
cell differentiation  (IBA,IEA)
cell surface receptor signaling pathway via JAK-STAT  (IBA,IEA)
cellular response to cytokine stimulus  (ISO)
cytokine-mediated signaling pathway  (IBA,IEA,ISO)
enzyme-linked receptor protein signaling pathway  (ISO)
growth hormone receptor signaling pathway via JAK-STAT  (IBA,IEA)
interleukin-15-mediated signaling pathway  (IEA)
interleukin-2-mediated signaling pathway  (IEA)
interleukin-4-mediated signaling pathway  (IEA,IMP)
interleukin-9-mediated signaling pathway  (IEA)
intracellular signal transduction  (IBA,IEA,ISO)
negative regulation of complement-dependent cytotoxicity  (IMP)
negative regulation of dendritic cell cytokine production  (ISO)
negative regulation of FasL production  (ISO)
negative regulation of interleukin-10 production  (ISO)
negative regulation of interleukin-12 production  (ISO)
negative regulation of T cell activation  (ISO)
negative regulation of T-helper 1 cell differentiation  (ISO)
negative regulation of thymocyte apoptotic process  (ISO)
positive regulation of activated T cell proliferation  (ISO)
positive regulation of calcium ion transport  (ISO)
positive regulation of cytosolic calcium ion concentration  (ISO)
positive regulation of dendritic cell apoptotic process  (ISO)
positive regulation of extrinsic apoptotic signaling pathway in absence of ligand  (ISO)
positive regulation of nitric-oxide synthase biosynthetic process  (ISO)
positive regulation of T cell proliferation  (ISO)
positive regulation of transcription by RNA polymerase II  (ISO)
regulation of apoptotic process  (IBA,IEA)
regulation of T cell apoptotic process  (ISO)
response to interleukin-4  (IEA)
T cell homeostasis  (ISO)
transcription by RNA polymerase II  (ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:24280217   PMID:30032202  


Genomics

Comparative Map Data
JAK3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl259,905,919 - 59,926,495 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1259,905,901 - 59,926,504 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2259,475,346 - 59,495,932 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JAK3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381917,824,782 - 17,847,982 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1917,824,780 - 17,848,071 (-)EnsemblGRCh38hg38GRCh38
GRCh371917,935,591 - 17,958,791 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361917,797,961 - 17,819,800 (-)NCBINCBI36Build 36hg18NCBI36
Build 341917,797,960 - 17,819,800NCBI
Celera1917,837,310 - 17,860,555 (-)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1917,500,992 - 17,524,212 (-)NCBIHuRef
CHM1_11917,935,132 - 17,958,532 (-)NCBICHM1_1
T2T-CHM13v2.01917,958,895 - 17,982,060 (-)NCBIT2T-CHM13v2.0
Jak3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39872,129,027 - 72,143,221 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl872,128,940 - 72,143,219 (+)EnsemblGRCm39 Ensembl
GRCm38871,676,383 - 71,690,577 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl871,676,296 - 71,690,575 (+)EnsemblGRCm38mm10GRCm38
MGSCv37874,200,473 - 74,214,473 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36874,605,563 - 74,619,563 (+)NCBIMGSCv36mm8
Celera874,191,138 - 74,205,120 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.43NCBI
Jak3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,418,807 - 18,432,515 (+)NCBIGRCr8
mRatBN7.21618,386,330 - 18,398,542 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,386,405 - 18,398,536 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1618,437,879 - 18,449,181 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01619,570,477 - 19,581,792 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,490,818 - 18,502,120 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01620,107,471 - 20,120,678 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,109,200 - 20,120,668 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01619,968,486 - 19,981,132 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41618,878,139 - 18,889,441 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11618,878,136 - 18,889,439 (+)NCBI
Celera1618,589,820 - 18,601,138 (+)NCBICelera
RH 3.4 Map16181.8RGD
Cytogenetic Map16p14NCBI
Jak3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555243,401,642 - 3,411,643 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555243,399,895 - 3,412,018 (+)NCBIChiLan1.0ChiLan1.0
JAK3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22022,681,699 - 22,713,145 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11921,686,968 - 21,719,944 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01917,299,129 - 17,330,700 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11918,283,157 - 18,304,641 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1918,283,560 - 18,300,964 (-)Ensemblpanpan1.1panPan2
JAK3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12045,051,135 - 45,068,445 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2045,050,526 - 45,072,805 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2044,963,131 - 44,980,402 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02045,535,925 - 45,553,392 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2045,535,982 - 45,557,946 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12044,772,769 - 44,789,998 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02045,183,055 - 45,200,281 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02045,459,016 - 45,476,242 (+)NCBIUU_Cfam_GSD_1.0
Jak3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,661,414 - 203,676,227 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365963,212,593 - 3,224,048 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365963,212,593 - 3,224,426 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JAK3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1616,301,760 - 16,323,343 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl616,300,525 - 16,322,859 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660743,064,511 - 3,086,605 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Jak3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249081,371,595 - 1,383,879 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249081,371,595 - 1,383,879 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in JAK3
295 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2 5 2
Low 10 3 23 2 3 1
Below cutoff 2 2

Sequence


RefSeq Acc Id: ENSSSCT00000033248   ⟹   ENSSSCP00000030830
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl259,905,919 - 59,926,495 (+)Ensembl
RefSeq Acc Id: XM_003123500   ⟹   XP_003123548
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1259,905,913 - 59,926,504 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005654907   ⟹   XP_005654964
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1259,905,901 - 59,926,504 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013987479   ⟹   XP_013842933
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1259,910,911 - 59,926,504 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013987480   ⟹   XP_013842934
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1259,910,911 - 59,926,504 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021083532   ⟹   XP_020939191
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1259,905,919 - 59,926,504 (+)NCBI
Sequence:
RefSeq Acc Id: XP_005654964   ⟸   XM_005654907
- Peptide Label: isoform X1
- UniProtKB: K7GSE8 (UniProtKB/TrEMBL),   A0A8D1I8T6 (UniProtKB/TrEMBL),   A0A0B8RZF9 (UniProtKB/TrEMBL),   A0A8D0M4F9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003123548   ⟸   XM_003123500
- Peptide Label: isoform X1
- UniProtKB: K7GSE8 (UniProtKB/TrEMBL),   A0A8D1I8T6 (UniProtKB/TrEMBL),   A0A0B8RZF9 (UniProtKB/TrEMBL),   A0A8D0M4F9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020939191   ⟸   XM_021083532
- Peptide Label: isoform X2
- UniProtKB: A0A8D0M4F9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013842933   ⟸   XM_013987479
- Peptide Label: isoform X1
- UniProtKB: K7GSE8 (UniProtKB/TrEMBL),   A0A8D1I8T6 (UniProtKB/TrEMBL),   A0A0B8RZF9 (UniProtKB/TrEMBL),   A0A8D0M4F9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013842934   ⟸   XM_013987480
- Peptide Label: isoform X1
- UniProtKB: K7GSE8 (UniProtKB/TrEMBL),   A0A8D1I8T6 (UniProtKB/TrEMBL),   A0A0B8RZF9 (UniProtKB/TrEMBL),   A0A8D0M4F9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000030830   ⟸   ENSSSCT00000033248
Protein Domains
FERM   Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000013888 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005044646 UniProtKB/TrEMBL
  ENSSSCG00015077282 UniProtKB/TrEMBL
  ENSSSCG00025046225 UniProtKB/TrEMBL
  ENSSSCG00030055989 UniProtKB/TrEMBL
  ENSSSCG00040048852 UniProtKB/TrEMBL
  ENSSSCG00045022166 UniProtKB/TrEMBL
  ENSSSCG00050071833 UniProtKB/TrEMBL
  ENSSSCG00060027438 UniProtKB/TrEMBL
  ENSSSCG00065008028 UniProtKB/TrEMBL
  ENSSSCG00070015887 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000033248 ENTREZGENE
  ENSSSCT00000033248.3 UniProtKB/TrEMBL
  ENSSSCT00005071896.1 UniProtKB/TrEMBL
  ENSSSCT00015108906.1 UniProtKB/TrEMBL
  ENSSSCT00015108995.1 UniProtKB/TrEMBL
  ENSSSCT00025062737.1 UniProtKB/TrEMBL
  ENSSSCT00030078003.1 UniProtKB/TrEMBL
  ENSSSCT00030078058.1 UniProtKB/TrEMBL
  ENSSSCT00040065854.1 UniProtKB/TrEMBL
  ENSSSCT00040066149.1 UniProtKB/TrEMBL
  ENSSSCT00045037857.1 UniProtKB/TrEMBL
  ENSSSCT00045038004.1 UniProtKB/TrEMBL
  ENSSSCT00050098018.1 UniProtKB/TrEMBL
  ENSSSCT00050098033.1 UniProtKB/TrEMBL
  ENSSSCT00060037142.1 UniProtKB/TrEMBL
  ENSSSCT00065010788.1 UniProtKB/TrEMBL
  ENSSSCT00070031192.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.505.10 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Band_41_domain UniProtKB/TrEMBL
  FERM_domain UniProtKB/TrEMBL
  FERM_F1 UniProtKB/TrEMBL
  FERM_F2 UniProtKB/TrEMBL
  Jak1_PHL_dom UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
  SH2_dom_sf UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/TrEMBL
  Tyr_kinase_cat_dom UniProtKB/TrEMBL
  Tyr_kinase_non-rcpt_Jak/Tyk2 UniProtKB/TrEMBL
  Tyr_kinase_non-rcpt_Jak3 UniProtKB/TrEMBL
KEGG Report ssc:100518649 UniProtKB/TrEMBL
NCBI Gene JAK3 ENTREZGENE
PANTHER TYROSINE-PROTEIN KINASE HOPSCOTCH UniProtKB/TrEMBL
  TYROSINE-PROTEIN KINASE JAK3 UniProtKB/TrEMBL
Pfam FERM_F1 UniProtKB/TrEMBL
  FERM_F2 UniProtKB/TrEMBL
  Jak1_Phl UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/TrEMBL
PIRSF TyrPK_Jak UniProtKB/TrEMBL
PRINTS JANUSKINASE UniProtKB/TrEMBL
  JANUSKINASE3 UniProtKB/TrEMBL
  TYRKINASE UniProtKB/TrEMBL
PROSITE FERM_3 UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_TYR UniProtKB/TrEMBL
SMART B41 UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
  TyrKc UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF55550 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt A0A0B8RZF9 ENTREZGENE
  A0A4X1UAQ3_PIG UniProtKB/TrEMBL
  A0A8D0M4F9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0QAU0_PIG UniProtKB/TrEMBL
  A0A8D1I8T6 ENTREZGENE, UniProtKB/TrEMBL
  K7GSE8 ENTREZGENE, UniProtKB/TrEMBL
  Q6JDV4_PIG UniProtKB/TrEMBL
VGNC ID VGNC:89272 ENTREZGENE