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Gene: F13A1 (coagulation factor XIII A chain) Sus scrofa

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Symbol:

F13A1

Name:

coagulation factor XIII A chain

RGD ID:

13931869

Description:

ENCODES a protein that exhibits metal ion binding (inferred); protein-glutamine gamma-glutamyltransferase activity (inferred); INVOLVED IN peptide cross-linking (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); arteriosclerosis (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

coagulation factor XIII, A1 polypeptide

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	3,751,292 - 3,900,762 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	3,751,290 - 3,900,797 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	3,952,957 - 4,102,446 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
F13A1	Pig	arteriosclerosis		ISO	F13A1 (Homo sapiens)	9068941		RGD	PMID:11941274 and REF_RGD_ID:1581023
F13A1	Pig	B-lymphoblastic leukemia/lymphoma		ISO	F13A1 (Homo sapiens)	9068941	protein:increased expression:B lymphoblast:	RGD	PMID:16894461 and REF_RGD_ID:11041855
F13A1	Pig	Cerebral Hemorrhage		ISO	F13A1 (Homo sapiens)	9068941		RGD	PMID:9550516 and REF_RGD_ID:1581027
F13A1	Pig	Chemical and Drug Induced Liver Injury		ISO	F13a1 (Mus musculus)	9068941		RGD	PMID:22019897 and REF_RGD_ID:11041813
F13A1	Pig	Coronary Disease		ISO	F13A1 (Homo sapiens)	9068941		RGD	PMID:11391716 and REF_RGD_ID:1581030
F13A1	Pig	Crohn's disease		ISO	F13A1 (Homo sapiens)	9068941	associated with Fistula and protein:decreased activity:plasma:	RGD	PMID:7611208 and REF_RGD_ID:10450739
F13A1	Pig	diabetic retinopathy		ISO	F13A1 (Homo sapiens)	9068941	protein:increased expression:optic choroid vascular plexus:	RGD	PMID:11375345 and REF_RGD_ID:8693344
F13A1	Pig	disseminated intravascular coagulation		ISO	F13A1 (Homo sapiens)	9068941		RGD	PMID:16642548 and REF_RGD_ID:1581020
F13A1	Pig	gastric ulcer		ISO	F13a1 (Rattus norvegicus)	9068941		RGD	PMID:11435721 and REF_RGD_ID:708325
F13A1	Pig	Hemorrhage		ISO	F13a1 (Mus musculus)	9068941		RGD	PMID:12529747 and REF_RGD_ID:11041809
F13A1	Pig	priapism	susceptibility	ISO	F13A1 (Homo sapiens)	9068941	associated with sickle cell anemia and DNA:SNPs::multiple(human)	RGD	PMID:17408468 and REF_RGD_ID:10450728
F13A1	Pig	pulmonary embolism		ISO	F13A1 (Homo sapiens)	9068941		RGD	PMID:12958612 and REF_RGD_ID:1581021
F13A1	Pig	Spontaneous Abortions		ISO	F13a1 (Mus musculus)	9068941		RGD	PMID:12933578 and REF_RGD_ID:10450744
F13A1	Pig	Stroke		ISO	F13A1 (Homo sapiens)	9068941		RGD	PMID:11692020 and REF_RGD_ID:1581026
F13A1	Pig	Uterine Hemorrhage		ISO	F13a1 (Mus musculus)	9068941		RGD	PMID:12933578 and REF_RGD_ID:10450744
F13A1	Pig	Venous Thrombosis		ISO	F13A1 (Homo sapiens)	9068941		RGD	PMID:9920839 and REF_RGD_ID:1581032
F13A1	Pig	Venous Thrombosis	susceptibility	ISO	F13A1 (Homo sapiens)	9068941	DNA:polymorphism:cds:p.V34L(human)	RGD	PMID:12358922 and REF_RGD_ID:10450745

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
F13A1	Pig	combined oxidative phosphorylation deficiency 14		ISO	F13A1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Combined oxidative phosphorylation deficiency 14	ClinVar	PMID:22833457 and PMID:28492532
F13A1	Pig	factor XIII deficiency		ISO	F13A1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hereditary factor XIII deficiency disease	ClinVar	PMID:31136071
F13A1	Pig	Factor XIII, A Subunit, Deficiency Of		ISO	F13A1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10027709 more ...
F13A1	Pig	genetic disease		ISO	F13A1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 and PMID:28492532
F13A1	Pig	hemorrhagic disease		ISO	F13A1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Abnormal bleeding	ClinVar
F13A1	Pig	myocardial infarction		ISO	F13A1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10365735 more ...
F13A1	Pig	thrombophilia due to thrombin defect		ISO	F13A1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:22995991 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
F13A1	Pig	allergic contact dermatitis		ISO	F13A1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:17374397
F13A1	Pig	thrombophilia		ISO	F13A1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD
F13A1	Pig	Venous Thrombosis		ISO	F13A1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:10365735

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
F13A1	Pig	Factor XIII, A Subunit, Deficiency Of		ISO	F13A1 (Homo sapiens)	7240710		OMIM
F13A1	Pig	myocardial infarction		ISO	F13A1 (Homo sapiens)	7240710		OMIM
F13A1	Pig	thrombophilia due to thrombin defect		ISO	F13A1 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
F13A1	Pig	blood coagulation	acts_upstream_of_or_within	IEA	UniProtKB:Q8BH61 and ensembl:ENSMUSP00000048667	150520179		Ensembl	GO_REF:0000107
F13A1	Pig	blood coagulation, fibrin clot formation	involved_in	IBA	MGI:1921395 more ...	150520179		GO_Central	GO_REF:0000033
F13A1	Pig	blood coagulation, fibrin clot formation	involved_in	IEA	UniProtKB:P00488 more ...	150520179		Ensembl	GO_REF:0000107
F13A1	Pig	peptide cross-linking	acts_upstream_of_or_within	ISO	F13a1 (Mus musculus)	9068941	PMID:15507206	MGI	PMID:15507206
F13A1	Pig	peptide cross-linking	involved_in	ISO	F13A1 (Homo sapiens)	9068941	PMID:27363989	UniProt	PMID:27363989

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
F13A1	Pig	metal ion binding	enables	IEA	UniProtKB-KW:KW-0479	150520179		UniProt	GO_REF:0000043
F13A1	Pig	protein binding	enables	ISO	UniProtKB:O15273 more ...	9068941	PMID:32814053	IntAct	PMID:32814053
F13A1	Pig	protein-glutamine gamma-glutamyltransferase activity	enables	IBA	FB:FBgn0031975 more ...	150520179		GO_Central	GO_REF:0000033
F13A1	Pig	protein-glutamine gamma-glutamyltransferase activity	enables	IEA	InterPro:IPR008958 more ...	150520179		InterPro	GO_REF:0000002
F13A1	Pig	protein-glutamine gamma-glutamyltransferase activity	enables	IEA	UniProtKB:P00488 more ...	150520179		Ensembl	GO_REF:0000107

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
F13A1	Pig	coagulation cascade pathway		ISO	F13A1 (Homo sapiens)	9068941		RGD	PMID:16102057 and REF_RGD_ID:11352259

Imported Annotations - SMPDB

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
F13A1	Pig	acenocoumarol pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00269
F13A1	Pig	alteplase pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00280
F13A1	Pig	aminocaproic acid pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00286
F13A1	Pig	anistreplase pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00281
F13A1	Pig	aprotinin pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00288
F13A1	Pig	argatroban pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00276
F13A1	Pig	bivalirudin pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00277
F13A1	Pig	dicoumarol pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00270 and SMP:00656
F13A1	Pig	enoxaparin pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00272
F13A1	Pig	fondaparinux pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00273
F13A1	Pig	heparin pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00274
F13A1	Pig	phenindione pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00655
F13A1	Pig	reteplase pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00285
F13A1	Pig	tranexamic acid pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00287
F13A1	Pig	warfarin pharmacodynamics pathway		ISO	F13A1 (Homo sapiens)	9068941		SMPDB	SMP:00268

PMID:14681463	PMID:22301074	PMID:30032202

F13A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	3,751,292 - 3,900,762 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	3,751,290 - 3,900,797 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	3,952,957 - 4,102,446 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

F13A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	6,144,084 - 6,320,662 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	6,144,084 - 6,321,013 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	6,144,317 - 6,320,895 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	6,089,310 - 6,265,923 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	6,089,316 - 6,265,901	NCBI
Celera	6	7,372,733 - 7,550,578 (-)	NCBI		Celera
Cytogenetic Map	6	p25.1	NCBI
HuRef	6	6,020,217 - 6,197,010 (-)	NCBI		HuRef
CHM1_1	6	6,146,854 - 6,323,031 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	6,013,258 - 6,189,597 (-)	NCBI		T2T-CHM13v2.0

F13a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	37,051,150 - 37,234,220 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	37,051,152 - 37,234,220 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	36,867,178 - 37,050,244 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	36,867,178 - 37,050,244 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	36,959,047 - 37,142,113 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	36,874,653 - 37,056,670 (-)	NCBI		MGSCv36	mm8
Celera	13	37,983,710 - 38,163,470 (-)	NCBI		Celera
Cytogenetic Map	13	A3.3	NCBI
cM Map	13	14.44	NCBI

F13a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	28,021,197 - 28,197,960 (+)	NCBI		GRCr8
mRatBN7.2	17	27,815,723 - 27,992,494 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	27,815,702 - 27,992,700 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	27,681,035 - 27,857,733 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	29,284,581 - 29,461,269 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	27,645,506 - 27,822,130 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	28,504,650 - 28,680,015 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	28,504,623 - 28,680,362 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	30,406,396 - 30,581,441 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	34,093,525 - 34,270,498 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	34,096,401 - 34,272,682 (+)	NCBI
Celera	17	27,443,244 - 27,619,724 (+)	NCBI		Celera
Cytogenetic Map	17	p12	NCBI

F13a1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955465	7,443,166 - 7,617,436 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955465	7,444,118 - 7,617,366 (+)	NCBI	ChiLan1.0	ChiLan1.0

F13A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	20,772,261 - 20,960,421 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	16,776,810 - 16,955,131 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	5,978,505 - 6,156,705 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	6,159,012 - 6,337,000 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	6,157,926 - 6,513,961 (-)	Ensembl	panpan1.1		panPan2

F13A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	6,186,750 - 6,347,522 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	6,187,235 - 6,349,773 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	35	6,191,814 - 6,354,808 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	35	6,267,724 - 6,430,557 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	35	6,267,724 - 6,428,774 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	35	6,122,455 - 6,285,137 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	35	6,148,410 - 6,311,467 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	35	7,481,872 - 7,644,350 (-)	NCBI		UU_Cfam_GSD_1.0

F13a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	17,930,084 - 18,091,733 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936534	6,199,066 - 6,361,476 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936534	6,199,066 - 6,360,374 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

F13A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	65,885,498 - 66,040,026 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	65,885,658 - 66,040,040 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	6,090,570 - 6,385,150 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

F13a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624756	19,103,327 - 19,259,964 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624756	19,103,064 - 19,259,632 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in F13A1
6579 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3


RefSeq Transcripts	XM_001927630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK238261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT956082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU469172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GACC01000324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01067170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000035671 ⟹ ENSSSCP00000030183

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	3,751,292 - 3,900,762 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000083671 ⟹ ENSSSCP00000071307

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	3,751,292 - 3,900,762 (-)	Ensembl

RefSeq Acc Id:

XM_001927630 ⟹ XP_001927665

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	3,751,290 - 3,900,797 (-)	NCBI

Sequence:

show sequence

AAGTTATTTAAGAGCCAACTTTCTGGTCGTGTATCCTGTGTCCTTTTGAGGAAGTTCCCCAGAGTCGCACAGAGCCAGCCTGCGCGGGGGCACCTTGGGGAGGGACCACAGGAAGCTGCGAAGCTGAG
AATGGCTGAGACTCCTGGGACTGGGGCCGCCTTCGGAGGCAGGAGAGCCCTTCCCCCCAACACCTCCAATGCGGAAGAGAACGACCCCCCCACCGTGGAGCTGCAGGGGGGCCTCATGCCCCGGGGAT
TCAACCCTCAAGACTACCTGAATGTGACGGATGTTCACCTGTTCAAGGAGCGATGGGACAGCAACAAGGTGGACCACCACACTGACAAATACGACAGCAAGAAGCTGATTGTACGCCGAGGACAGCCT
TTCTACATCCAGATCGACTTCAGCCGTCCCTATGACCCCAGAAGGGACCTCTTCAGGGTGGAATATGTCATTGGGCGCTACCCCCAGGAGAACAAAGGAACCTACATCCCAGTGCCCATCGTCTCCGA
GCTGCAGAGAGGCAAGTGGGGGGCCAAGGTCATCACGACGGAGGACAGGTCGGTGCGGCTGTCCGTCCAGCCCTCGCCAGACTGCATCGTGGGCAAGTTCCGCATGTACGTTGCCGTCTGGACCCCGT
ACGGCGTGATCCGCACCAGCCGGAACCCCGAAACAGACACGTACATCCTCTTCAACCCTTGGTGTGAAGAGGATGCTGTGTACCTGGATAACGACAAAGAAAGAGAAGAGTATGTCCTGAATGACATC
GGGGTGATTTTTTATGGTGAATTCAACGACATCAAGAGCAGAAGCTGGAGCTATGGTCAGTTTGAGGAGGGCATCCTTGACGCTTGCCTGTACATGATGGACAGAGCAAAGATGGACCTTTCTGGCAG
AGGGAATCCCATCAAAGTCAGCCGTGTCGGGTCTGCTATGGTTAATGCCAAAGATGATGAAGGTGTCCTCGTTGGGTCCTGGGACAATGTGTATTCGTACGGGGTCCCGCCATCAGCCTGGACGGGAA
GTGTTGACATCCTGTTGGAATACAAGAGTTCTCAGACTCCAGTCCGCTATGGTCAGTGCTGGGTTTTTGCTGGAGTCTTTAACACGTTCTTAAGATGCCTTGGGATACCAGCAAGAGTCGTTACTAAT
TATTTCTCAGCCCATGACAACAATGCCAATTTGCAGCTGGACATCTTCCTGGAAGAAGATGGGAACGTGAACTCCAAGCTCACCAAGGATTCGGTGTGGAACTACCACTGCTGGAATGAAGCCTGGAT
GACGAGGCCCGATCTCCCGGTGGGATTCGGAGGTTGGCAAGTCGTGGACAGCACCCCCCAGGAAAACAGCGACGGCATGTACCGCTGTGGCCCGGCCTCCGTTCAAGCCATCAAGCACGGTCACGTCT
GCTTCCAGTTTGATGCGCCCTTCGTTTTCGCAGAGGTCAACAGCGATGTTATTTACATTACCGCCAAGAAAGATGGCACGCACGTGGTTAAAACCCTGGATACCACCCACATTGGGAAATTAATTGTG
ACCAAACAAGTTGGAGCAGATGGCATGAAGGATATCACAGATACCTACAAATTCCAAGAAGGTCAAGAAGAAGAGCGGCTGGCCCTCGAAACTGCCCTGATGTATGGGGCTAAGAAGCCCCTCAGCAC
AGAGGGCATCCCCAAATCCCGGTCCGACATCCACATGGACTTCGAGGTGGAGCGCGCCGTGCTGGGCAGAGACTTCAAAGTCGTCCTCACCTTCAGAAACAACAGCCCCACCCGCTACAGCGTCACGG
CCTATCTCTCGGGCAACATCACCTTCTACACCGGCGTCTCCAAGGGGGAGTTCAAGAACGAGACGTTCAATGTCACGCTGGAGCCCCTGTCCTTCAAGACGGAGGCGGTGTGGGTCCGAGCGGGCGAG
TACATGGGCCAGCTGCTGGAGCAGGCCTTCCTGCACTTCTTCGTCACCGCCCGTGTCAACGAGACCAACGATGTCCTGGCCAAGCAGAAGTCCGTCGTGCTCACCATCCCCAAGATCAGCGTGAAGGT
CCGTGGCACTCAGGCAGTGGGTTCCGACATGGTGGTGACGGTTGAGTTCACCAACCCCCTAAACGAACCCCTGCAGAATGTCTGGATGCGCTTGGATGGCCCTGGAGTGACCAGGCCACTGCGGAAGA
TATTCCGGGAGATCCGGCCCAACGCCACCGTGCAGTGGGAAGAGGTGTGTCGGCCTTGGGTCTCCGGGCCTCGGAAGCTGATGGCCAGCATGACCAGTGACTCCCTGAGACACGTGTACGGCGAGCTA
AACCTGCACATCCAGAGACGACCTTCCGTGTAGACGCCCACGGGGCTGAGAGGGACCCGGGCCTTGGCCTCCCGGAGTCTTGGCTCAGCATGTCCTAATGCACGAATAGTCACTCAGCTCTTGCTTTA
ACTTAGCCGGGAAGACCCAGACGGGACTGGGTGGGGCCGCAGAGGGGCGATGCCGTGAGTTTCCAAGATGCACGTTTCAGCAGGGCTCTTCAGGGGGGACGTTAGTGTTGAATCTCGCCACCTTCCAA
AGGGTTCTGAGCATTAGCTTTAATTAAGCTCTAATGAGGCTCTCCTAGCTCATAAGAGTAAAAGCCATCATTTATCATCTCAAATGGATGCAGCGCCACGTGGCAGAGAACTTCGCTTAGCAGGGGAT
CTGCTCAGTACCTGGCCTTGTGAAAAACAGCCCTGCTCATCCCCCACGCTGCCTTTTTTGGGGGGATGGGTAACATGCTCCCCCAGCTTGGGGGGAAGGCACACCATTTGGACCCCAGGATTCTAGTC
CCCTTTGTGGAAATCGGGTTTTAGTGTCTGCATCAGAATTTTTTCCCAGGAATTGAGGGCAGCATCATTTTTCTTCCTGGCACAGCCAGGAAAGGCCTTTCATCTTGCACCTGCAGCGAAGCGGCGGT
CTGCCAAATTTCCAGATTTTTCTTCTGAGAGGATGCGGCCCCATATTAACAAATTGCATTTGTGGGGAGCTTAATCACCTAAGAGGAGATAAGAAAGCAGGTGCAATCCTCGGATCTATTAAATAATG
TAGTTTTATGGTGCATTTTATCGGAGGTGTCACACTGTGGCCAGATCCGCAGGAACCAATATCCCTAACTTTAACCCTTTGGGGGCTGTCGTTCTAGAAAGTCATGAGGCTGACTTGGGACAGGAGGC
ATGAGGAATTAGTCTCTTTAATTAGTGATTAGCCTTCCTCTGTCTCTCTGGGATCATCTCCTTTGCACAATGACAAGGGTCCAGCTACAGATTTAGAGACAGAATAAACCCAGCAAGCTGGAGGTGCT
GGCAGCTGCAGTGAGCAGGCGCGGGGAAGGACAGGCAGCCACGGATTCGGATTCTCTTGTCCTTGACATCACGCGTGTTGACCCCTCGGCTCGACACACAGGTACTAAAAGGTAACGTGGACCCCACC
CCGCAAGCAGCCAGGGCTCCTGCACACCTGTTGGTAGAGGACGCTGACATCATTTGCATTAGGGTCCCAGGTTCCAAGAGACAATGCCATCGGTACTTATTTGCAGGGCCAATTTATTGTTAAAATTA
CCCATTGATATGCCTAGAGTGCGATTTGGGTCCGTAGATGGTGATTCTTTGCAAAAGAAAAGAAAGATGAGCAGTGAGAAGGAAGCTACGGGGGAAACAAGGAATGGAATCCTCTGGTCCACACAACC
ACGTTTCTAAGCCGTCGACCCTGTTCCTGGACCTTCGGCACCAAGAATCCACGAGGGTCAGCTGGTCCCCTCTGTAGGCGCATCCTAGCTAACTCTGTTAAGTAGTCTCCCAGCATTTGCTAAGCCTT
CCAATACTCAATTTTAAAATGAAATGCATCTTGCTGGACTGTTAACCTGGCTTCATATCGTATCTTCTGATTAACTAGAGTGTAATCAAAGCTTAAAATAAAAGCTCATATTTGCACCTGCA

hide sequence


Protein RefSeqs	XP_001927665	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000030183
	ENSSSCP00000030183.1
	ENSSSCP00000071307.1
	ENSSSCP00015005489.1
	ENSSSCP00015005516.1
	ENSSSCP00025030783.1
	ENSSSCP00025030871.1
	ENSSSCP00035020358.1
	ENSSSCP00035020362.1
	ENSSSCP00040044333.1
	ENSSSCP00045023115.1
	ENSSSCP00045023182.1
	ENSSSCP00050037057.1
	ENSSSCP00055035256.1
	ENSSSCP00055035386.1
	ENSSSCP00065031388.1
	ENSSSCP00070002393.1
GenBank Protein	JAA74260	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_001927665 ⟸ XM_001927630

- UniProtKB:

K7GQL2 (UniProtKB/TrEMBL), A0A4X1SKE4 (UniProtKB/TrEMBL), A0A8D0MLE8 (UniProtKB/TrEMBL), A0A8D1G0L8 (UniProtKB/TrEMBL), A0A8D1Z442 (UniProtKB/TrEMBL), A0A8D0ZUY7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAETPGTGAAFGGRRALPPNTSNAEENDPPTVELQGGLMPRGFNPQDYLNVTDVHLFKERWDSNKVDHHTDKYDSKKLIVRRGQPFYIQIDFSRPYDPRRDLFRVEYVIGRYPQENKGTYIPVPIVSE
LQRGKWGAKVITTEDRSVRLSVQPSPDCIVGKFRMYVAVWTPYGVIRTSRNPETDTYILFNPWCEEDAVYLDNDKEREEYVLNDIGVIFYGEFNDIKSRSWSYGQFEEGILDACLYMMDRAKMDLSGR
GNPIKVSRVGSAMVNAKDDEGVLVGSWDNVYSYGVPPSAWTGSVDILLEYKSSQTPVRYGQCWVFAGVFNTFLRCLGIPARVVTNYFSAHDNNANLQLDIFLEEDGNVNSKLTKDSVWNYHCWNEAWM
TRPDLPVGFGGWQVVDSTPQENSDGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDVIYITAKKDGTHVVKTLDTTHIGKLIVTKQVGADGMKDITDTYKFQEGQEEERLALETALMYGAKKPLST
EGIPKSRSDIHMDFEVERAVLGRDFKVVLTFRNNSPTRYSVTAYLSGNITFYTGVSKGEFKNETFNVTLEPLSFKTEAVWVRAGEYMGQLLEQAFLHFFVTARVNETNDVLAKQKSVVLTIPKISVKV
RGTQAVGSDMVVTVEFTNPLNEPLQNVWMRLDGPGVTRPLRKIFREIRPNATVQWEEVCRPWVSGPRKLMASMTSDSLRHVYGELNLHIQRRPSV

hide sequence

Ensembl Acc Id:

ENSSSCP00000071307 ⟸ ENSSSCT00000083671

Ensembl Acc Id:

ENSSSCP00000030183 ⟸ ENSSSCT00000035671

Protein Domains

Transglutaminase-like

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000024310	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015010781	UniProtKB/TrEMBL
	ENSSSCG00025051983	UniProtKB/TrEMBL
	ENSSSCG00035038302	UniProtKB/TrEMBL
	ENSSSCG00040072017	UniProtKB/TrEMBL
	ENSSSCG00045019560	UniProtKB/TrEMBL
	ENSSSCG00050063413	UniProtKB/TrEMBL
	ENSSSCG00055022550	UniProtKB/TrEMBL
	ENSSSCG00065052645	UniProtKB/TrEMBL
	ENSSSCG00070001546	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000035671	ENTREZGENE
	ENSSSCT00000035671.4	UniProtKB/TrEMBL
	ENSSSCT00000083671.2	UniProtKB/TrEMBL
	ENSSSCT00015014146.1	UniProtKB/TrEMBL
	ENSSSCT00015014203.1	UniProtKB/TrEMBL
	ENSSSCT00025071147.1	UniProtKB/TrEMBL
	ENSSSCT00025071310.1	UniProtKB/TrEMBL
	ENSSSCT00035050820.1	UniProtKB/TrEMBL
	ENSSSCT00035050829.1	UniProtKB/TrEMBL
	ENSSSCT00040099075.1	UniProtKB/TrEMBL
	ENSSSCT00045033337.1	UniProtKB/TrEMBL
	ENSSSCT00045033435.1	UniProtKB/TrEMBL
	ENSSSCT00050086349.1	UniProtKB/TrEMBL
	ENSSSCT00055044250.1	UniProtKB/TrEMBL
	ENSSSCT00055044406.1	UniProtKB/TrEMBL
	ENSSSCT00065072075.1	UniProtKB/TrEMBL
	ENSSSCT00070002908.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
	3.90.260.10	UniProtKB/TrEMBL
InterPro	Ig-like_fold	UniProtKB/TrEMBL
	Ig_E-set	UniProtKB/TrEMBL
	Papain_like_cys_pep_sf	UniProtKB/TrEMBL
	Transglutaminase	UniProtKB/TrEMBL
	Transglutaminase-like	UniProtKB/TrEMBL
	Transglutaminase-like_sf	UniProtKB/TrEMBL
	Transglutaminase_animal	UniProtKB/TrEMBL
	Transglutaminase_AS	UniProtKB/TrEMBL
	Transglutaminase_C	UniProtKB/TrEMBL
	Transglutaminase_C_sf	UniProtKB/TrEMBL
	Transglutaminase_N	UniProtKB/TrEMBL
KEGG Report	ssc:100153504	UniProtKB/TrEMBL
NCBI Gene	F13A1	ENTREZGENE
PANTHER	PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE	UniProtKB/TrEMBL
	PTHR11590:SF42	UniProtKB/TrEMBL
Pfam	Transglut_C	UniProtKB/TrEMBL
	Transglut_core	UniProtKB/TrEMBL
	Transglut_N	UniProtKB/TrEMBL
PIRSF	TGM_EBP42	UniProtKB/TrEMBL
PROSITE	TRANSGLUTAMINASES	UniProtKB/TrEMBL
SMART	TGc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49309	UniProtKB/TrEMBL
	SSF54001	UniProtKB/TrEMBL
	SSF81296	UniProtKB/TrEMBL
UniProt	A0A4X1SKE4	ENTREZGENE
	A0A5G2RIC7_PIG	UniProtKB/TrEMBL
	A0A8D0MLE8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0MPF7_PIG	UniProtKB/TrEMBL
	A0A8D0SF31_PIG	UniProtKB/TrEMBL
	A0A8D0ZUY7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1G0L8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1Z442	ENTREZGENE, UniProtKB/TrEMBL
	K7GQL2	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A4X1SKE4	UniProtKB/TrEMBL
VGNC ID	VGNC:87858	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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