MS4A2 (membrane spanning 4-domains A2)

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Gene: MS4A2 (membrane spanning 4-domains A2) Sus scrofa

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Symbol:

MS4A2

Name:

membrane spanning 4-domains A2

RGD ID:

13921190

Description:

ENCODES a protein that exhibits IgE binding (ortholog); phosphoprotein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cytokine production (ortholog); positive regulation of mast cell degranulation (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN endosome (ortholog)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

FcR beta chain; high affinity immunoglobulin epsilon receptor subunit beta; membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for, beta polypeptide)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	11,400,420 - 11,420,298 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	11,400,415 - 11,420,314 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	10,959,657 - 10,979,571 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

aspirin-induced respiratory disease (ISO)

asthma (ISO)

atopic dermatitis (ISO)

Bronchial Hyperreactivity (ISO)

COVID-19 (ISO)

drug allergy (ISO)

Immediate Hypersensitivity (ISO)

intellectual disability (ISO)

leukocyte adhesion deficiency 3 (ISO)

Respiratory Sounds (ISO)

rhinitis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell surface receptor signaling pathway (IBA,IEA,ISO)

cytokine production (ISO)

immune response (IEA)

positive regulation of mast cell degranulation (ISO)

regulation of release of sequestered calcium ion into cytosol (ISO)

signal transduction (IEA,ISO)

Cellular Component

endosome (ISO)

external side of plasma membrane (IBA,IEA)

Fc-epsilon receptor I complex (IBA,IEA)

membrane (IEA)

plasma membrane (IBA,IEA)

Molecular Function

IgE binding (IEA,ISO)

phosphoprotein binding (ISO)

protein binding (ISO)

protein kinase binding (ISO)

SH2 domain binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Fc epsilon receptor mediated signaling pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:30032202

Genomics

Comparative Map Data

MS4A2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	11,400,420 - 11,420,298 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	11,400,415 - 11,420,314 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	10,959,657 - 10,979,571 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MS4A2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	60,088,259 - 60,098,467 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	60,088,261 - 60,098,467 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	59,856,137 - 59,865,940 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	59,612,713 - 59,622,593 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	59,612,712 - 59,622,593	NCBI
Celera	11	57,220,517 - 57,230,320 (+)	NCBI		Celera
Cytogenetic Map	11	q12.1	NCBI
HuRef	11	56,203,291 - 56,213,094 (+)	NCBI		HuRef
CHM1_1	11	59,722,124 - 59,731,922 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	60,039,540 - 60,049,747 (+)	NCBI		T2T-CHM13v2.0

Ms4a2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	11,592,881 - 11,601,154 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	11,592,887 - 11,601,083 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	11,615,517 - 11,623,790 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	11,615,523 - 11,623,719 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	11,691,683 - 11,698,133 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	11,684,238 - 11,690,688 (-)	NCBI		MGSCv36	mm8
Celera	19	12,289,076 - 12,295,526 (-)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	8.46	NCBI

Ms4a2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	217,864,855 - 217,873,934 (-)	NCBI		GRCr8
mRatBN7.2	1	208,440,179 - 208,448,716 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	208,440,361 - 208,448,310 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	216,815,093 - 216,823,042 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	223,833,935 - 223,841,752 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	216,569,529 - 216,577,478 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	227,957,363 - 227,965,312 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	227,957,302 - 227,965,386 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	235,019,784 - 235,027,733 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	214,011,050 - 214,018,999 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	214,169,479 - 214,177,429 (+)	NCBI
Celera	1	205,916,298 - 205,924,247 (-)	NCBI		Celera
RH 3.4 Map	1	1501.5	RGD
Cytogenetic Map	1	q43	NCBI

Ms4a2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955511	4,380,502 - 4,400,852 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955511	4,377,894 - 4,400,797 (+)	NCBI	ChiLan1.0	ChiLan1.0

MS4A2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	61,224,616 - 61,234,384 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	62,268,298 - 62,278,085 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	55,318,843 - 55,326,779 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	58,764,911 - 58,772,567 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	58,764,911 - 58,772,567 (+)	Ensembl	panpan1.1		panPan2

MS4A2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	50,439,133 - 50,456,785 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	50,450,024 - 50,456,785 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	49,890,835 - 49,897,600 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	51,612,389 - 51,629,878 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	51,623,124 - 51,629,878 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	50,670,449 - 50,677,218 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	50,767,877 - 50,774,639 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	51,392,625 - 51,399,386 (+)	NCBI		UU_Cfam_GSD_1.0

Ms4a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	12,629,201 - 12,638,145 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936581	2,744,881 - 2,751,925 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936581	2,743,133 - 2,751,925 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MS4A2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	13,657,842 - 13,666,314 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	13,654,696 - 13,665,925 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	110,993,186 - 111,001,722 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ms4a2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624864	807,253 - 813,381 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624864	804,950 - 813,419 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in MS4A2
931 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_214092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005660844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF525403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK237931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK348987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU861944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01072264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000047778 ⟹ ENSSSCP00000034836

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	11,400,420 - 11,420,153 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000065915 ⟹ ENSSSCP00000049169

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	11,403,105 - 11,420,200 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000070884 ⟹ ENSSSCP00000063861

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	11,401,497 - 11,420,298 (-)	Ensembl

RefSeq Acc Id:

NM_214092 ⟹ NP_999257

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	11,400,476 - 11,420,200 (-)	NCBI

Sequence:

show sequence

CAGCGTTGGGTAGGCAAAGATACGTTAAGGCTGAGTTGAGAGTGGTTGCTGTTTTCTGCACAGG
CATCGTCAATGATCGTTTTTGAGACTCTTCTGCTTGCAACGAGATGGGCTTGAGAGGAAAGAAC
TCTACCAAGGCCTGAAACCTCCAAGAGACGCTGAGGGAGGAAGCCCACCAAGGCTCACTGTAAC
ACTTTTCTTCACCACTGGATCTCTCGGTTAATGACAAATGGACACAGAAGGTAGGAGCAGAACA
GATCTTGCTCTTCCAGAACCACAAAGGCCCTCCAGTGCATCTGAAATTGAACTATCAGAAGTAC
CTCTCCATGAGAACGTCTTACAGGAGGAGGATACCCCACCCCCACCACGCCGTACATGGCTGAC
TTTTTTGAAGAAGGAGCTGGAATTCCTGGGGGTAACACAAATTTTGGTTGGTTTGATATGCCTT
TATTTTGGAACGATTGTCTGCTCCATGCTCAATATTTCAGAATTTAAAGAAGACTTTTTTTCAT
CATTTAAAGCAGGCTACCCATTCTGGGGAGCAGCATTGTTTGGTATTTCTGGATTTTTGTCAGT
TATGTCTGAAGAGAAACAGGCAATATATCTGCTACGAGGAATGCTGGGAGCAAACACCATCAGC
AGCATAGCTGCAGGAGTAGGAACGGTCATCCTGATCATCAACCTAAAGAAGAGCTCATCTTATG
CCTCCAATTGCCGGAACATCTATGAGAATGACTTCTGCTCCACGGCTTCCTTTTCCACCGAAAT
TGTGGCGATGATCCTCTTTCTCACCATTCTGGGGTTCTGCAGTGCTGTGTTACTGACCATCTAT
GGGGTCAGAGAAATACTTGAAAGAAATAAGATTCCAGAAGATCGTCTTTATGAAGAAGTAAACA
TATATTCGCCAATTTACAGTGAGTTAGAAGAGCGAAAGGAGATAGCTTCTGCCCCTGATTCATA
AGAATCATGTGTCCAGAACATTCTAACTCACAACAAAGGATTTAGAAAGCCCTTTGTTTCAGGG
CCACTGGCAAAATTTCCATTCTTTCTATATCTGCCAATGTTACATTATGATTTATTCTTCAGAT
GGCAATATTCTGTTTTTGTTGTTTTCATTCACTTAAATCCCCTGTTCCTTTGTAGATATGATAG
GCTCCTATTTTTCTTATTTTCTTATGCTGTCACATCCATCCTTTCTGGGAATTCAACACATAAT
TAGGAAGCATTTACTGTGCGCCTAGAACTACGCAAATAGGGAAAACAAAAGGAAAGCTGGTTGA
GAGTTGACAGTGTGATAATATTTGGCTATTAGAGTTCACTTGATCTGCAGACCTGTGTGATACA
GCCACCCTACAGGACTGTCAGCGCCTTGAGGGCAGAGTCCATCCAGCAAACATACACTGAGAAA
AGACTAAGTTTTTCACACTTTTCTCTTTCACACTGAGTAAGAGTAATTGGTCTTCTTGTTAACA
AGTTGAATTAAAGGATAAAGAGAAGCAATTGGTTATTTAACACATTACATGTTCAGGTCTGAGA
TCAAAGAACACCTGGTGATGTTGAAAGAAGTGACAGGAAGAAATATGAATTGATAAGTGGGGAG
TACAGGCAGACCTAGATTAAGCTCAGTTTTAGGTTGTCATCTTTAAGAAAGCAAAGCGAAATGC
AATTTAAGAGTGCCTGATGGTATCGAATAGTGTTGGTTGAAGATGAAATTTGGTGAGAGAGATT
TTTATATCACTATAGGAGAGACTTTGTTTTTTTTTGTCTTTTTGCCTTTTCTAGGGCCACACCC
GTGGCATATGGAGGTTCCTGGGCTAGGGGTCTAATTGGAGCTGTAGCAGCCAGCCTACGCCAGA
GCCACTGCAACGAGGGATCCGAGCTGCCTCTGCAACCTACACCACAGCTCACAGCAATGCCAGA
TCCTTAACCCCCTGAGCGAGGCCAGGGATCGAACCTGCAACCCCTTGGTTCCTCATCAGATTCG
TTGACCACTGAGCCACAACAGTAACTCCTAGGAGGCATCATTATGAAGTGAGGCAGATTAACAC
TCTAAGAGAATTATTTAGAAATAAAAGTCAAGCCAGGTTAACTTTTACATGCTTATAATCAGAG
CAGAAAAGGAAAGAAAATATCTTGAGTAGAAGATAAGAGAATTAAGCAGAAAAATGCATTGCGA
AATGACGTAGAGCAAGTAGCCCAAAGTAGGGAGAGGTCAGAGGAAGAGAGACAAAGTAACCATC
AGAGACAGTATCTGCTGGCTTGGGCAAGAGAAAAAAAAAAATCAGTAGTGCTAAATTGACTCCA
GATAAGTCACAGAAAAGGGGCAAAGAAAATACTGATAGTGAATGAATGTAAAAGGTGCAGAGAC
ATTCAAAACAGGGTTATAGTGATGAGTAAATGAATAAAGCATTTGCAGAAGTATTTTGAGAGAG
AGAATAGGGGTATATACCTGATGTAAGAAAGAGACTGTGAACAGAAGATAGTGAAGAAAAGTTA
AGCTCGGCCATATGATTTGGTTGCTGTTGACATTTTTATTTCTAAAAGAAGGAAGAAGAGTTTA
CACTATTAGCCCAAGTTAAAAAAAAAAAAAAAAAAAAGCAGTCCTGTGGAGGGACTGAAAAAAT
CAGCTTGAGGTATTCACAAATTCATTAATAAAAGCATTAAGAATATTTATTTATTTGGAATGCT
AAGATTAAAAAGTGATAAGTAGGAGTTGCCACGGAGCAGTGGGTTAAGAATCTGACTGCAAGGG
CTTTGGTCACTGCAGAGGCGTGGGTTCAATCCCCAGGAGGTGCAGTGGGTTAAAGGATCCAGTG
TTACCATAGCTGTGGCTCAGTTTCAATTCCTAGCCTGGAAACATCCATATGCCGCTAGTGAGGC
CATCATTATTTTTTTTTTTTAAGTAATAAGTAGATGTTAATTTCTCCAGATTATGAAAGTGATC
ACATAACGACACAACCAATGATTAAATGAATTGTTATGCTTATCTGACCCCATGACCTAAGGTT
TTCAAATTTCGTTTTTCTTAAATAAGATTTTTTTCTCCAAACTTCAGAGTGGCATAAAAATATA
CCCTTTCACTGCATAGCTTGCAAAGCTGTATCTCCATTCTTGATCATCCATAGGTATAATCATA
TCACTTGCGTAGCAAATATACTCACATCCAAACTCCTAGATCTGACCCACCAGGACCTCTAGAA
GTGGATCCAGCCAGTCTTTACAGAATATTACACCCCTCTCTCTTCCACCTAATTTATGTTTTAA
CCACACTGTTGACTGTGTATATCCCGTATACTCCGCATGTTTTTTTTTGTTTGTTTTTTGTTTT
TTTTGTTTCCAGTTCATTCTGATATTTTTTCTGCCCCTGCCTGCTTTTTATCACATGCTCACAT
CAAGCATAGACTGAGAACACAACGGGCATGCTTTTCACACATTCACTGCCCCAAATTATCTTTT
TTGAAATGTCAACTGCAAGGTTATCTTCTCCATGAAGACTACCTAATGCACACTTATTCATGCA
ACCATAATTTTTTGCTTCATAACCCCTTTACCCCATGATGCCATGTATTAGCGTGTACTATTAG
TGTACTTACAA

hide sequence

RefSeq Acc Id:

XM_005660844 ⟹ XP_005660901

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	11,400,415 - 11,420,314 (-)	NCBI

Sequence:

show sequence

TTCCTCATCAAAACTGAACTTTTGGGAAGCACAGAGAAGTCCATGTGGCCACAGACCCAGATGT
GGTCACCACACCCTGCAGCCACCAACAAAACATTTTCACCAACTTCTCTACAGCGTTGGGTAGG
CAAAGATACGTTAAGGCTGAGTTGAGAGTGGTTGCTGTTTTCTGCACAGGCATCGTCAATGATC
GTTTTTGAGACTCTTCTGCTTGCAACGAGATGGGCTTGAGAGGAAAGAACTCTACCAAGGCCTG
AAACCTCCAAGAGACGCTGAGGGAGGAAGCCCACCAAGGCTCACTGTAACACTTTTCTTCACCA
CTGGATCTCTCGGTTAATGACAAATGGACACAGAAGGTAGGAGCAGAACAGATCTTGCTCTTCC
AGAACCACAAAGGCCCTCCAGTGCATCTGAAATTGAACTATCAGAAGTACCTCTCCATGAGAAC
GTCTTACAGGAGGAGGATACCCCACCCCCACCACGCCGTACATGGCTGACTTTTTTGAAGAAGG
AGCTGGAATTCCTGGGGGTAACACAAATTTTGGTTGGTTTGATATGCCTTTATTTTGGAACGAT
TGTCTGCTCCATTCTCAATATTTCAGAATTTAAAGAAGACTTTTTTTCATCATTTAAAGCAGGC
TACCCATTCTGGGGAGCAGCATTGCTACGAGGAATGCTGGGAGCAAACACCATCAGCAGCATAG
CTGCAGGAGTAGGAACGGTCATCCTGATCATCAACCTAAAGAAGAGCTCATCTTATGCCTCCAA
TTGCCGGAACATCTATGAGAATGACTTCTGCTCCACAGCTTCCTTTTCCACTGAAATTGTGGCG
ATGATCCTCTTTCTCACCATTCTGGGGTTCTGCAGTGCTGTGTTACTGACCATCTATGGGGTCA
GAGAAATACTTGAAAGAAATAAGATTCCAGAAGATCGTCTTTATGAAGAAGTAAACATATATTC
GCCAATTTACAGTGAGTTAGAAGAGCGAAAGGAGATAGCTTCTGCCCCTGATTCATAAGAATCA
TGTGTCCAGAACATTCTAACTCACAACAAAGGATTTAGAAAGCCCTTTGTTTCAGGGCCACTGG
CAAAATTTCCATTCTTTCTATATCTGCCAATGTTACATTATGATTTATTCTTCAGATGGCAATA
TTCTGTTTTTGTTGTTTTCATTCACTTAAATCCCCTGTTCCTTTGTAGATATGATAGGCTCCTA
TTTTTCTTATTTTCTTTGCTGTCACATCCATCCTTTCTGGGAATTCAACACATAATTAGGAAGC
ATTTACTGTGCGCCTAGAACTACGCAAATAGGGAAAACAAAAGGAAAGCTGGTTGAGAGTTGAC
AGTGTGATAATATTTGGCTATTAGAGTTCACTTGATCTGCAGACCTGTGTGATACAGCCACCCT
ACAGGACTGTCAGCGCCTTGAGGGCAGAGTCCATCCAGCAAACATACACTGAGAAAAGACTAAG
TTTTTCACACTTTTCTCTTTCACACTGAGTAAGAGTAATTGGTCTTCTTGTTAACAAGTTGAAT
TAAAGGATAAAGAGAAGCAATTGGTTATTTAACACATTACATGTTCAGGTCTGAGATCAAAGAA
CACTGGTGATGTTGAAAGAAGTGACAGGAAGAAATATGAATTGATAAGTGGGGAGTACAGGCAG
ACCTAGATTAAGCTCAGTTTTAGGTTGTCATCTTTAAGAAAGCAAAGCGAAATGCAATTTAAGA
GTGCCTGATGGTATCGAATAGTGTTGGTTGAAGATGAAATTTGGTGAGAGAGATTTTATATCAC
TATAGGAGAGACTTTGTTTTTTTTTTGTCTTTTTGCCTTTTCTAGGGCCACACCCGTGGCATAT
GGAGGTTCCTGGGCTAGGGGTCTAATTGGAGCTGTAGCAGCCAGCCTACGCCAGAGCCACTGCA
ACGAGGGATCCGAGCTGCCTCTGCAACCTACACCACAGCTCACAGCAATGCCAGATCCTTAACC
CCCTGAGCGAGGCCAGGGATCGAACCTGCAACCCCTTGGTTCCTCATCAGATTCGTTGACCACT
GAGCCACAACAGTAACTCCTAGGAGGCATCATTATGAAGTGAGGCAGATTAACACTCTAAGAGA
ATTATTTAGAAATAAAAGTCAAGCCAGGTTAACTTTTACATGCTTATAATCAGAGCAGAAAAGG
AAAGAAAATATCTTGAGTAGAAGATAAGAGAATTAAGCAGAAAAATGCATTGCGAAATGACGTA
GAGCAAGTAGCCCAAAGTAGGGAGAGGTCAGAGGAAGAGAGACAAAGTAACCATCAGAGACAGT
ATCTGCTGGCTTGGGCAAGAGAAAAAAAAAAATCAGTAGTGCTAAATTGACTCCAGATAAGTCA
CAGAAAAGGGGCAAAGAAAATACTGATAGTGAATGAATGTAAAAGGTGCAGAGACATTCAAACA
GGGTTATAGTGATGAGTAAATGAATAAAGCATTTGCAGAAGTATTTTGAGAGAGAGAATAGGGG
TATATACCTGATGTAAGAAAGAGACTGTGAACAGAAGATAGTGAAGAAAAGTTAAGCTCGGCCA
TATGATTTGGTTGCTGTTGACATTTTTATTTCTAAAAGAAGGAAGAAGAGTTTACACTATTAGC
CCAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAGCAGTCCTGTGGAGGGACTGAAAAAATCAGCT
TGAGGTATTCACAAATTCATTAATAAAAGCATTAAGAATATTTATTTATTTGGAATGCTAAGAT
TAAAAAGTGATAAGTAGGAGTTGCCACGGAGCAGTGGGTTAAGAATCTGACTGCAAGGGCTTTG
GTCACTGCAGAGGCGTGGGTTCAATCCCCAGGAGGTGCAGTGGGTTAAAGGATCCAGTGTTACC
ATAGCTGTGGCTCAGTTTCAATTCCTAGCCTGGAAACATCCATATGCCGCTAGTGAGGCCATCA
TTATTTTTTTTTTTAAGTAATAAGTAGATGTTAATTTCTCCAGATTATGAAAGTGATCACATAA
CGACACAACCAATGATTAAATGAATTGTTATGCTTATCTGACCCCATGACCTAAGGTTTTCAAA
TTTCGTTTTTCTTAAATAAGATTTTTTTCTCCAAACTTCAGAGTGGCATAAAATATACCCTTTC
ACTGCATAGCTTGCAAAGCTGTATCTCCATTCTTGATCATCCATAGGTATAATCATATCACTTG
CGTAGCAAATATACTCACATCCAAACTCCTAGATCTGACCCACCAGGACCTCTAGAAGTGGATC
CAGCCAGTCTTTACAAATATTACACCCCTCTCTCTTCCACCTAATTTTGTTTTAACCACACTGT
TGACCGTGTATATCCCGTATACTCGCATGTTTTTTTTTGTTTGTTTTTTGTTTTTTTGTTCCAG
TTCATTCTGATATTTTTTCTGCCCCTGCCTGCTTTTTATCACATGCTCACATCAAGCATAGACT
GAGAACACAACGGGCATGCTTTTCACACATTCACTGCCCCAAATTATCTTTTTTGAAATGTCAA
CTGCAAGGTTATCTTCTCCATGAAGACTACCTAATGCACACTTATTCATGCAACCATAATTTTT
TGCTTCATAACCCCTTTACCCCATGATGCCATGTATTAGCGTGTACTATTAGTGTACTTACAAG
ATCCTTGATGTATCGTCGATTATGGGTATTTCTTCAATAAATCAGAATCATTTAACTTGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_999257	(Get FASTA)	NCBI Sequence Viewer
	XP_005660901	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAM82609	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000034836
	ENSSSCP00000034836.1
	ENSSSCP00000049169.2
	ENSSSCP00000063861
	ENSSSCP00000063861.1
	ENSSSCP00005040863.1
	ENSSSCP00015022587.1
	ENSSSCP00025020817.1
	ENSSSCP00025020834.1
	ENSSSCP00030047789.1
	ENSSSCP00030047796.1
	ENSSSCP00035035052.1
	ENSSSCP00035035059.1
	ENSSSCP00040024059.1
	ENSSSCP00045035349.1
	ENSSSCP00045035417.1
	ENSSSCP00045035477.1
	ENSSSCP00045035531.1
	ENSSSCP00055035609.1
	ENSSSCP00055035693.1
	ENSSSCP00060041363.1
	ENSSSCP00060041374.1
	ENSSSCP00065017321.1
	ENSSSCP00065017322.1
	ENSSSCP00070043083.1
	ENSSSCP00070043084.1

RefSeq Acc Id:	XP_005660901 ⟸ XM_005660844
- Peptide Label:	isoform X1
- UniProtKB:	A0A5G2QIW8 (UniProtKB/TrEMBL), A0A8D0NQM9 (UniProtKB/TrEMBL), A0A8D0KBU3 (UniProtKB/TrEMBL), A0A8D1IHT8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDTEGRSRTDLALPEPQRPSSASEIELSEVPLHENVLQEEDTPPPPRRTWLTFLKKELEFLGVT QILVGLICLYFGTIVCSILNISEFKEDFFSSFKAGYPFWGAALLRGMLGANTISSIAAGVGTVI LIINLKKSSSYASNCRNIYENDFCSTASFSTEIVAMILFLTILGFCSAVLLTIYGVREILERNK IPEDRLYEEVNIYSPIYSELEERKEIASAPDS hide sequence

RefSeq Acc Id:

NP_999257 ⟸ NM_214092

- UniProtKB:

A0A8D1YFJ9 (UniProtKB/TrEMBL), A0A4X1VMM5 (UniProtKB/TrEMBL), A0A8D1WPC4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDTEGRSRTDLALPEPQRPSSASEIELSEVPLHENVLQEEDTPPPPRRTWLTFLKKELEFLGVT
QILVGLICLYFGTIVCSMLNISEFKEDFFSSFKAGYPFWGAALFGISGFLSVMSEEKQAIYLLR
GMLGANTISSIAAGVGTVILIINLKKSSSYASNCRNIYENDFCSTASFSTEIVAMILFLTILGF
CSAVLLTIYGVREILERNKIPEDRLYEEVNIYSPIYSELEERKEIASAPDS

hide sequence

Ensembl Acc Id:

ENSSSCP00000049169 ⟸ ENSSSCT00000065915

Ensembl Acc Id:

ENSSSCP00000063861 ⟸ ENSSSCT00000070884

Ensembl Acc Id:

ENSSSCP00000034836 ⟸ ENSSSCT00000047778

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000034506	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005041164	UniProtKB/TrEMBL
	ENSSSCG00015041869	UniProtKB/TrEMBL
	ENSSSCG00025035643	UniProtKB/TrEMBL
	ENSSSCG00030073852	UniProtKB/TrEMBL
	ENSSSCG00035062696	UniProtKB/TrEMBL
	ENSSSCG00040043012	UniProtKB/TrEMBL
	ENSSSCG00045029800	UniProtKB/TrEMBL
	ENSSSCG00055022734	UniProtKB/TrEMBL
	ENSSSCG00060070072	UniProtKB/TrEMBL
	ENSSSCG00065030277	UniProtKB/TrEMBL
	ENSSSCG00070025494	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000047778	ENTREZGENE
	ENSSSCT00000047778.2	UniProtKB/TrEMBL
	ENSSSCT00000065915.2	UniProtKB/TrEMBL
	ENSSSCT00000070884	ENTREZGENE
	ENSSSCT00000070884.2	UniProtKB/TrEMBL
	ENSSSCT00005066002.1	UniProtKB/TrEMBL
	ENSSSCT00015056320.1	UniProtKB/TrEMBL
	ENSSSCT00025048603.1	UniProtKB/TrEMBL
	ENSSSCT00025048645.1	UniProtKB/TrEMBL
	ENSSSCT00030103467.1	UniProtKB/TrEMBL
	ENSSSCT00030103476.1	UniProtKB/TrEMBL
	ENSSSCT00035084280.1	UniProtKB/TrEMBL
	ENSSSCT00035084291.1	UniProtKB/TrEMBL
	ENSSSCT00040057765.1	UniProtKB/TrEMBL
	ENSSSCT00045050798.1	UniProtKB/TrEMBL
	ENSSSCT00045050905.1	UniProtKB/TrEMBL
	ENSSSCT00045050993.1	UniProtKB/TrEMBL
	ENSSSCT00045051088.1	UniProtKB/TrEMBL
	ENSSSCT00055044687.1	UniProtKB/TrEMBL
	ENSSSCT00055044796.1	UniProtKB/TrEMBL
	ENSSSCT00060095638.1	UniProtKB/TrEMBL
	ENSSSCT00060095661.1	UniProtKB/TrEMBL
	ENSSSCT00065040889.1	UniProtKB/TrEMBL
	ENSSSCT00065040892.1	UniProtKB/TrEMBL
	ENSSSCT00070050960.1	UniProtKB/TrEMBL
	ENSSSCT00070050961.1	UniProtKB/TrEMBL
InterPro	CD20-like	UniProtKB/TrEMBL
	MS4A	UniProtKB/TrEMBL
KEGG Report	ssc:397166	UniProtKB/TrEMBL
NCBI Gene	MS4A2	ENTREZGENE
PANTHER	PTHR23320	UniProtKB/TrEMBL
	PTHR23320:SF66	UniProtKB/TrEMBL
Pfam	CD20	UniProtKB/TrEMBL
UniProt	A0A286ZTE2_PIG	UniProtKB/TrEMBL
	A0A287AYE0_PIG	UniProtKB/TrEMBL
	A0A4X1VMM5	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1VPT8_PIG	UniProtKB/TrEMBL
	A0A5G2QIW8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0KBU3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0NQM9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1IHT8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1ILZ8_PIG	UniProtKB/TrEMBL
	A0A8D1L5A8_PIG	UniProtKB/TrEMBL
	A0A8D1WPC4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1YFJ9	ENTREZGENE, UniProtKB/TrEMBL
	Q8MJ38_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:90411	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - SMPDB