Ms4a2 (membrane spanning 4-domains A2) - Rat Genome Database
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Gene: Ms4a2 (membrane spanning 4-domains A2) Ictidomys tridecemlineatus
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Symbol: Ms4a2
Name: membrane spanning 4-domains A2
RGD ID: 12464723
Description: ENCODES a protein that exhibits IgE binding (ortholog); IgE receptor activity (ortholog); phosphoprotein binding (ortholog); INVOLVED IN activation of phospholipase C activity (ortholog); cell surface receptor signaling pathway (ortholog); cytokine production (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); Fc-epsilon receptor I complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: high affinity immunoglobulin epsilon receptor subunit beta
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365812,743,133 - 2,751,925 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Ms4a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365812,743,133 - 2,751,925 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MS4A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1160,088,261 - 60,098,467 (+)EnsemblGRCh38hg38GRCh38
GRCh381160,088,261 - 60,098,467 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371159,856,137 - 59,865,940 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh371159,855,734 - 59,865,940 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361159,612,713 - 59,622,593 (+)NCBINCBI36hg18NCBI36
Build 341159,612,712 - 59,622,593NCBI
Celera1157,220,517 - 57,230,320 (+)NCBI
Cytogenetic Map11q12.1NCBI
HuRef1156,203,291 - 56,213,094 (+)NCBIHuRef
CHM1_11159,722,124 - 59,731,922 (+)NCBICHM1_1
Ms4a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391911,592,881 - 11,601,154 (-)NCBIGRCm39mm39
GRCm381911,615,517 - 11,623,790 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1911,615,523 - 11,623,719 (-)EnsemblGRCm38mm10GRCm38
MGSCv371911,691,683 - 11,698,133 (-)NCBIGRCm37mm9NCBIm37
MGSCv361911,684,238 - 11,690,688 (-)NCBImm8
Celera1912,289,076 - 12,295,526 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map198.46NCBI
Ms4a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21208,440,179 - 208,448,716 (-)NCBI
Rnor_6.0 Ensembl1227,957,302 - 227,965,386 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01227,957,363 - 227,965,312 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01235,019,784 - 235,027,733 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41214,011,050 - 214,018,999 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11214,169,479 - 214,177,429 (+)NCBI
Celera1205,916,298 - 205,924,247 (-)NCBICelera
RH 3.4 Map11501.5RGD
Cytogenetic Map1q43NCBI
Ms4a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555114,380,502 - 4,400,852 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555114,377,894 - 4,400,797 (+)NCBIChiLan1.0ChiLan1.0
MS4A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11158,764,911 - 58,772,567 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1158,764,911 - 58,772,567 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01155,318,843 - 55,326,779 (+)NCBIMhudiblu_PPA_v0panPan3
MS4A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2150,450,024 - 50,456,785 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12150,439,133 - 50,456,785 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
MS4A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl211,400,420 - 11,420,299 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1211,400,415 - 11,420,314 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2210,959,657 - 10,979,571 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MS4A2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1113,657,842 - 13,666,314 (-)NCBI
ChlSab1.1 Ensembl113,654,696 - 13,665,925 (-)Ensembl
Ms4a2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624864804,950 - 813,419 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005331541   ⟹   XP_005331598
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049365812,743,133 - 2,751,925 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013361275   ⟹   XP_013216729
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049365812,743,133 - 2,751,925 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005331598 (Get FASTA)   NCBI Sequence Viewer  
  XP_013216729 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013216729   ⟸   XM_013361275
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005331598   ⟸   XM_005331541
- Peptide Label: isoform X1
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000007813 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000006999 ENTREZGENE, UniProtKB/TrEMBL
  ENSSTOP00000024973 ENTREZGENE, UniProtKB/TrEMBL
  ENSSTOP00000027938 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000007821 ENTREZGENE, UniProtKB/TrEMBL
  ENSSTOT00000034294 ENTREZGENE, UniProtKB/TrEMBL
  ENSSTOT00000038050 UniProtKB/TrEMBL
InterPro CD20-like UniProtKB/TrEMBL
  MS4A UniProtKB/TrEMBL
  MS4A2 UniProtKB/TrEMBL
NCBI Gene Ms4a2 ENTREZGENE
PANTHER PTHR23320 UniProtKB/TrEMBL
  PTHR23320:SF66 UniProtKB/TrEMBL
Pfam CD20 UniProtKB/TrEMBL
UniProt A0A287CUN1_ICTTR UniProtKB/TrEMBL
  A0A287D306_ICTTR UniProtKB/TrEMBL
  I3MAH5_ICTTR UniProtKB/TrEMBL