Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Polr3d (RNA polymerase III subunit D) Rattus norvegicus
Analyze
Symbol: Polr3d
Name: RNA polymerase III subunit D
Description: Predicted to contribute to RNA polymerase III activity. Predicted to be involved in positive regulation of innate immune response and positive regulation of interferon-beta production. Predicted to colocalize with the nuclear chromatin. Orthologous to human POLR3D (RNA polymerase III subunit D); PARTICIPATES IN RNA polymerase III transcription pathway; purine metabolic pathway; pyrimidine metabolic pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DNA-directed RNA polymerase III subunit RPC4; LOC306012; MGC116334; polymerase (RNA) III (DNA directed) polypeptide D; polymerase (RNA) III (DNA directed) polypeptide D, 44kDa; polymerase (RNA) III subunit D
Orthologs:
Homo sapiens (human) : POLR3D (RNA polymerase III subunit D)  HGNC  Alliance
Mus musculus (house mouse) : Polr3d (polymerase (RNA) III (DNA directed) polypeptide D)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Polr3d (RNA polymerase III subunit D)
Pan paniscus (bonobo/pygmy chimpanzee) : POLR3D (RNA polymerase III subunit D)
Canis lupus familiaris (dog) : POLR3D (RNA polymerase III subunit D)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Polr3d (RNA polymerase III subunit D)
Sus scrofa (pig) : POLR3D (RNA polymerase III subunit D)
more info ...
Related Pseudogenes: Polr3d-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01552,129,471 - 52,134,140 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1552,129,471 - 52,134,140 (-)Ensembl
Rnor_5.01555,852,988 - 55,857,657 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41550,838,153 - 50,842,822 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11550,854,526 - 50,858,347 (-)NCBI
Celera1545,190,713 - 45,195,382 (-)NCBICelera
Cytogenetic Map15p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Polr3d
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311816
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.