Bmd36 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bmd36 (Bone mineral density QTL 36) Rattus norvegicus

Symbol: Bmd36
Name: Bone mineral density QTL 36
RGD ID: 2293686
Trait: femur strength trait   (VT:0010010)    
Measurement Type: femoral neck ultimate force   (CMO:0001703)    
LOD Score: 7.4
P Value: 1.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01539,749,557 - 79,033,707RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01543,570,947 - 82,573,380RGDRnor5.0
RGSC_v3.41538,542,355 - 78,048,493RGDRGSC3.4
Cross Type: intercross
Strains Crossed: COP/OlaHsd DA/OlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
osteoporosis  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
COP/OlaHsd  (IEA)
DA/OlaHsd  (IEA)

References

References - curated
1. Alam I, etal., J Bone Miner Res. 2008 Feb 18;.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1308945Cab39lcalcium binding protein 39-like153974512439849022Rat
1311845Cdadc1cytidine and dCMP deaminase domain containing 1153986509439894122Rat
1561256Shisa2shisa family member 2153994509539949393Rat
1594597Atp8a2ATPase phospholipid transporting 8A2153995568940488737Rat
7687379LOC102552603eukaryotic translation initiation factor 4B-like153996028239962490Rat
11510240LOC10835298460S ribosomal protein L23a pseudogene154011031040110967Rat
9118704LOC103693865ETS-related transcription factor Elf-2 pseudogene154036466340369076Rat
9240540LOC103693635uncharacterized LOC103693635154046656540490130Rat
7715015LOC102552699uncharacterized LOC102552699154047853640484459Rat
9245664LOC103693864uncharacterized LOC103693864154048185740488808Rat
631334Nup58nucleoporin 58154049675440545933Rat
11451836LOC108352930uncharacterized LOC108352930154049712640506316Rat
1305378Mtmr6myotubularin related protein 6154055891740597311Rat
1559605Amer2APC membrane recruitment protein 2154066318340667705Rat
7564878LOC102553536uncharacterized LOC102553536154067732440710829Rat
7537865LOC102553694uncharacterized LOC102553694154079181440793247Rat
1307364Spata13spermatogenesis associated 13154093765241066645Rat
1560876C1qtnf9C1q and TNF related 9154106957941080961Rat
621680Mipepmitochondrial intermediate peptidase154108418041192621Rat
7642007LOC10255610440S ribosomal protein S25-like154121310041213565Rat
1564996Tnfrsf19TNF receptor superfamily member 19154124982041316203Rat
7731808LOC102553894uncharacterized LOC102553894154143736341441778Rat
1307281Sacssacsin molecular chaperone154144807841530412Rat
1359577Sgcgsarcoglycan, gamma154154933041595275Rat
9229390LOC103693662ATP synthase F(0) complex subunit C3, mitochondrial pseudogene154158943441591326Rat
11456396LOC108352931uncharacterized LOC108352931154160065241603385Rat
1308083Arl11ADP-ribosylation factor like GTPase 11154163998541645685Rat
1304571EbplEBP like154166811941691518Rat
1311339Kpna3karyopherin subunit alpha 3154169635641770112Rat
6492604LOC10091144140S ribosomal protein S20-like154173039441731458Rat
7609471LOC102547339uncharacterized LOC102547339154181852141823482Rat
9252639LOC103693866uncharacterized LOC103693866154186526741871122Rat
1306437Spryd7SPRY domain containing 7154187114441890879Rat
1307609Trim13tripartite motif-containing 13154189719141936545Rat
1307199Kcnrgpotassium channel regulator154193788041942205Rat
9225352LOC103693867uncharacterized LOC103693867154196755641982835Rat
7748249LOC102547503uncharacterized LOC102547503154199876042009682Rat
7545629LOC102547734uncharacterized LOC102547734154219442642209281Rat
1309565PbkPDZ binding kinase154248925342500377Rat
1593313Esco2establishment of sister chromatid cohesion N-acetyltransferase 2154250092942519019Rat
1307689Ccdc25coiled-coil domain containing 25154252210842555318Rat
7749993LOC102557042glioma tumor suppressor candidate region gene 2 protein-like154253376642536674Rat
11505026LOC108352932uncharacterized LOC108352932154256502942576459Rat
1309269Scara3scavenger receptor class A, member 3154260550542638409Rat
3907Cluclusterin154262661242665858Rat
7727798LOC102556378serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like154264605842653565Rat
620701Gulogulonolactone (L-) oxidase154267120642693711Rat
7572905LOC102555773uncharacterized LOC102555773154270162442722164Rat
69299Adam2ADAM metallopeptidase domain 2154270853642751281Rat
620732Ephx2epoxide hydrolase 2154275724142794211Rat
621533Chrna2cholinergic receptor nicotinic alpha 2 subunit154280889742825179Rat
628758Ptk2bprotein tyrosine kinase 2 beta154282730642947796Rat
7488975Mir6320microRNA 6320154295964042959760Rat
1564642Trim35tripartite motif-containing 35154296025542976798Rat
11439565LOC108352933uncharacterized LOC108352933154299791043001326Rat
69349Stmn4stathmin 4154300790143025852Rat
2055Adra1aadrenoceptor alpha 1A154329699743398314Rat
11492722LOC108352934uncharacterized LOC108352934154338019243387046Rat
2517Dpysl2dihydropyrimidinase-like 2154347564043581725Rat
1307266Pnma2PNMA family member 2154358187443589680Rat
621354Bnip3lBCL2 interacting protein 3 like154364389743667123Rat
620919Ppp2r2aprotein phosphatase 2, regulatory subunit B, alpha154367395843733182Rat
7527777LOC102555410uncharacterized LOC102555410154374267743749851Rat
9219078LOC103693652uncharacterized LOC103693652154376371043781098Rat
1593306LOC691986similar to ribosomal protein L6154386031643865447Rat
1310805Ebf2EBF transcription factor 2154390509944103742Rat
9437171LOC10369366360S ribosomal protein L26-like 1 pseudogene154428249044282950Rat
1566135RGD1566135similar to ribosomal protein L36154432946444329798Rat
1311003Cdca2cell division cycle associated 2154436539644411601Rat
1312010Kctd9potassium channel tetramerization domain containing 9154441159144439645Rat
2720Gnrh1gonadotropin releasing hormone 1154444185644446064Rat
9098115LOC103693653uncharacterized LOC103693653154444228744444512Rat
1306872Dock5dedicator of cytokinesis 5154444910844627774Rat
11507229LOC108352936uncharacterized LOC108352936154477426344775762Rat
11402717LOC108352935uncharacterized LOC108352935154477433544799192Rat
1593233LOC364411similar to 40S ribosomal protein S16154477933444781355Rat
621458Neflneurofilament light154479937844803251Rat
2323627LOC100359567mCG10343-like154484034944841756Rat
3160Nefmneurofilament medium154485530744860604Rat
9298415LOC103693658uncharacterized LOC103693658154487896444886848Rat
9372988LOC103693868uncharacterized LOC103693868154491898444922389Rat
7607976LOC102554953uncharacterized LOC102554953154503407645056414Rat
2325104LOC100359623BRCA1/BRCA2-containing complex, subunit 3-like154507697145079041Rat
7552758LOC102547998uncharacterized LOC102547998154522657845238560Rat
7572036LOC102547888uncharacterized LOC102547888154530560845324154Rat
1305071Dleu7deleted in lymphocytic leukemia, 7154536050545378840Rat
1359710Rnaseh2bribonuclease H2, subunit B154542201045472792Rat
2770Gucy1b2guanylate cyclase 1 soluble subunit beta 2154547966245550285Rat
7683338LOC102554746uncharacterized LOC102554746154555902845581410Rat
9132763LOC103693869uncharacterized LOC103693869154559692145603148Rat
9194307LOC103693870peptidyl-prolyl cis-trans isomerase A-like154563273945633224Rat
9419950LOC103693641peptidyl-prolyl cis-trans isomerase A-like154567377645674261Rat
1593344Fam124afamily with sequence similarity 124 member A154571199445780395Rat
7725436LOC102552418glyceraldehyde-3-phosphate dehydrogenase-like154582654145828416Rat
1585042Serpine3serpin family E member 3154582798345855952Rat
2318381LOC100362304ribosomal protein L38-like154584239845844409Rat
1309480Ints6integrator complex subunit 6154584405045929996Rat
1593235LOC364401similar to ribosomal protein L27154596647745966922Rat
1307337Wdfy2WD repeat and FYVE domain containing 2154600861346134319Rat
1560445Defb42defensin beta 42154615951146166335Rat
1593234LOC364402similar to 60S ribosomal protein L23a154616345946164020Rat
1562459Defb41defensin beta 41154617978746182308Rat
1566384Defb43defensin beta 43154619677146201271Rat
1559641Defb30defensin beta 30154622013646223429Rat
1562179Defb44defensin beta 44154623594246237658Rat
11463330LOC108353035uncharacterized LOC108353035154626404546266145Rat
621509Ctsbcathepsin B154631674146337613Rat
61834Fdft1farnesyl diphosphate farnesyl transferase 1154633924846367302Rat
1312033Neil2nei-like DNA glycosylase 2154637178046382730Rat
2665Gata4GATA binding protein 4154638670346458679Rat
7714091LOC102548615uncharacterized LOC102548615154643341146436983Rat
1308859BlkBLK proto-oncogene, Src family tyrosine kinase154655555246593778Rat
9199392LOC103693643glyceraldehyde-3-phosphate dehydrogenase-like154660561646606702Rat
1561302Fam167afamily with sequence similarity 167, member A154661376146643771Rat
1310214TdhL-threonine dehydrogenase154666792646682752Rat
628840Mtmr9myotubularin related protein 9154669726246719296Rat
1310719Xkr6XK related 6154678496347173352Rat
7643541LOC102548944uncharacterized LOC102548944154698237546995598Rat
2325416Mir598microRNA 598154705749647057574Rat
9248746LOC103693644uncharacterized LOC103693644154718239647193922Rat
7579111LOC102553493uncharacterized LOC102553493154719442447208438Rat
1566025Pinx1PIN2/TERF1 interacting, telomerase inhibitor 1154721168247270343Rat
9256182LOC103693645uncharacterized LOC103693645154724479547245395Rat
7528420LOC102549097uncharacterized LOC102549097154725797447274678Rat
1310038Sox7SRY-box transcription factor 7154729369947300460Rat
1565212RGD1565212similar to 4930578I06Rik protein154732205847338931Rat
1586886Rp1l1RP1 like 1154734438047384461Rat
1586875Prss55serine protease 55154743357547470809Rat
6498506Prss51serine protease 51154745320647459554Rat
7549580LOC102553895uncharacterized LOC102553895154745984847473782Rat
1586868LOC683422similar to Plasma kallikrein precursor (Plasma prekallikrein) (Kininogenin) (Fletcher factor)154746564847475294Rat
70979Msramethionine sulfoxide reductase A154748833347800662Rat
9129141LOC103693872uncharacterized LOC103693872154781512547829765Rat
11473625LOC10835293860S ribosomal protein L37 pseudogene154784235047842731Rat
7663474LOC102554489uncharacterized LOC102554489154792056847949352Rat
7738961LOC102554677uncharacterized LOC102554677154794665247964151Rat
2325336Mir124-1microRNA 124-1154796429847964382Rat
11372698LOC108352939uncharacterized LOC108352939154802472948030748Rat
1303307Kif13bkinesin family member 13B154803083748192932Rat
1306787Hmbox1homeobox containing 1154819470948326310Rat
9239990LOC103693649non-histone chromosomal protein HMG-17 pseudogene154829736948306650Rat
1311539Ints9integrator complex subunit 9154832672848413792Rat
62065Extl3exostosin-like glycosyltransferase 3154842041948465171Rat
11398936LOC108353027uncharacterized LOC108353027154846703748470240Rat
628814Fzd3frizzled class receptor 3154860125948670257Rat
11411643LOC108352940H/ACA ribonucleoprotein complex subunit 3 pseudogene154862827048628715Rat
1305049Fbxo16F-box protein 16154867317248723358Rat
1307849Zfp395zinc finger protein 395154878932048803025Rat
3362Pnocprepronociceptin154880584148833071Rat
2324506Elp3elongator acetyltransferase complex subunit 3154894286649005074Rat
728301Anxa2-ps1annexin 2, pseudogene1154897610548977316Rat
1593317Rps17lribosomal protein S17-like154900893249009411Rat
1562099Nuggcnuclear GTPase, germinal center associated154901195149055246Rat
1306539Scara5scavenger receptor class A, member 5154906914249177159Rat
11392146LOC108352941uncharacterized LOC108352941154915883549168967Rat
62032Adam7ADAM metallopeptidase domain 7154941894649467174Rat
1309861Adamdec1ADAM-like, decysin 1154948560449521638Rat
7726377LOC102550654disintegrin and metalloproteinase domain-containing protein 28-like154953389449619629Rat
1593304LOC691988similar to a disintegrin and metalloproteinase domain 28154961109349619620Rat
7555795LOC102550885protein SSX1-like154961413349679783Rat
9173651LOC103693664igE-binding protein-like154968970549692597Rat
2323508LOC100359732mCG20085-like154976405349764744Rat
6493460LOC100911335WD repeat-containing protein 82-like154995275449953628Rat
1586394LOC689906similar to CG17293-PA154999691849997911Rat
1593232LOC364414similar to RRS1 ribosome biogenesis regulator homolog155031076550311939Rat
1593231LOC364415similar to Septin-2 (Protein NEDD5) (Neural precursor cell expressed developmentally down-regulated protein 5)155034416550345446Rat
727820Adam28ADAM metallopeptidase domain 28155035674550425911Rat
7707332LOC10255727660S ribosomal protein L7a-like155065920850660004Rat
11497538LOC10835303660S ribosomal protein L7a pseudogene155083586150836687Rat
621776Stc1stanniocalcin 1155089113750901791Rat
1593230LOC364417similar to 40S ribosomal protein S17155091088750911324Rat
1306149Nkx2-6NK2 homeobox 6155103462051038715Rat
1305369Nkx3-1NK3 homeobox 1155106531651067908Rat
1359361Slc25a37solute carrier family 25 member 37155112576451168384Rat
1566115Synbsyncytin b155117498651222929Rat
1590801LOC367277similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002)155119523651196616Rat
9177319LOC103693687uncharacterized LOC103693687155119631451222918Rat
9292376LOC103693686uncharacterized LOC103693686155121807451219982Rat
1309511Entpd4ectonucleoside triphosphate diphosphohydrolase 4155122295451250787Rat
1308435Loxl2lysyl oxidase-like 2155127602251365238Rat
9452837LOC103693875uncharacterized LOC103693875155135450651360327Rat
1311790R3hcc1R3H domain and coiled-coil containing 1155136894051384831Rat
1308779Chmp7charged multivesicular body protein 7155138537351400606Rat
9452828LOC103693694uncharacterized LOC103693694155140069151406642Rat
1308041Tnfrsf10bTNF receptor superfamily member 10b155143385351464215Rat
1309924Rhobtb2Rho-related BTB domain containing 2155146514851485562Rat
9259039LOC103693695uncharacterized LOC103693695155148826151494461Rat
7630497LOC102550955uncharacterized LOC102550955155150033651503510Rat
1593295Pebp4phosphatidylethanolamine binding protein 4155152858751615204Rat
7553452LOC102551019uncharacterized LOC102551019155161785451637644Rat
1593295Pebp4phosphatidylethanolamine binding protein 4155164494851740626Rat
2545Egr3early growth response 3155175668351762080Rat
1308253Bin3bridging integrator 3155179933951818697Rat
1309922Ccar2cell cycle and apoptosis regulator 2155181888751834443Rat
1308117RGD1308117similar to 9930012K11Rik protein155183470351841412Rat
1359203Pdlim2PDZ and LIM domain 2155184356251856785Rat
628900Sorbs3sorbin and SH3 domain containing 3155185900451895707Rat
9071276LOC103693697uncharacterized LOC103693697155188793251895186Rat
621616Ppp3ccprotein phosphatase 3 catalytic subunit gamma155189642751968075Rat
9197333LOC10369369860S ribosomal protein L35 pseudogene155192999451931152Rat
9444731LOC103693807mitochondrial pyruvate carrier 1 pseudogene155193301151933576Rat
1307026Slc39a14solute carrier family 39 member 14155198287252029841Rat
1306964Piwil2piwi-like RNA-mediated gene silencing 2155203769352116277Rat
1596002LOC691713hypothetical protein LOC691713155204788052049547Rat
1311816Polr3dRNA polymerase III subunit D155212947152134140Rat
2325539Mir320amicroRNA 320a155213427652134357Rat
9114929NEWGENE_1305790phytanoyl-CoA 2-hydroxylase interacting protein155214819252160285Rat
1305790Phyhipphytanoyl-CoA 2-hydroxylase interacting protein155214873752160283Rat
620739Bmp1bone morphogenetic protein 1155216640152210786Rat
3666Sftpcsurfactant protein C155221153852214480Rat
1311079Lgi3leucine-rich repeat LGI family, member 3155222057852227706Rat
1306561Reep4receptor accessory protein 4155223528352238490Rat
7741006LOC102551860splicing factor 3A subunit 2-like155224168852244540Rat
620634HrHR, lysine demethylase and nuclear receptor corepressor155224180152261276Rat
1311802Nudt18nudix hydrolase 18155226555752268081Rat
1308870Fhip2bFHF complex subunit HOOK interacting protein 2B155227149552288938Rat
1311419Dmtndematin actin binding protein155229276252320385Rat
2607Fgf17fibroblast growth factor 17155232675852337360Rat
727816Npm2nucleophosmin/nucleoplasmin 2155233745752345849Rat
1310928Xpo7exportin 7155235784552443055Rat
1310966Dok2docking protein 2155244988452455414Rat
61809Gfra2GDNF family receptor alpha 2155255700452648984Rat
2323059LOC100359986ribosomal protein L31-like155271258752713305Rat
1587867LOC685907similar to PRAME family member 8155278297852785460Rat
1592172Dpm3-ps1dolichyl-phosphate mannosyltransferase polypeptide 3, pseudogene 1155284642152846784Rat
6499750LOC100910177dolichol-phosphate mannosyltransferase subunit 3-like155291925052919654Rat
9178492LOC103693702uncharacterized LOC103693702155294148952986438Rat
9071283LOC103693703uncharacterized LOC103693703155302854953054386Rat
9310814LOC103693704NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial pseudogene155317482953175158Rat
7571001LOC102552533uncharacterized LOC102552533155322355653237776Rat
11496255LOC108353037uncharacterized LOC108353037155349518553495987Rat
11431499LOC108353002glyceraldehyde-3-phosphate dehydrogenase pseudogene155354511853545627Rat
6497566LOC100910693glyceraldehyde-3-phosphate dehydrogenase-like155354515453546153Rat
9077456LOC103693705uncharacterized LOC103693705155373352753737621Rat
7556177LOC102554416uncharacterized LOC102554416155398847653991195Rat
9266858LOC103693706uncharacterized LOC103693706155413299054140764Rat
7689627LOC102554611uncharacterized LOC102554611155425854354277832Rat
9196664LOC103693809multiple epidermal growth factor-like domains protein 11155427793054307774Rat
9264820LOC103693810multiple epidermal growth factor-like domains protein 6155431028954319955Rat
1304736Fndc3afibronectin type III domain containing 3a155437886554582954Rat
9466191LOC103693707coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial-like155458298254608560Rat
9308519LOC103693710uncharacterized LOC103693710155465679054659734Rat
9210102LOC103693708uncharacterized LOC103693708155465854354659904Rat
7499926LOC102555164uncharacterized LOC102555164155478124854785492Rat
1592074LOC306026similar to solute carrier family 25, member 5155480629854807216Rat
619797Cysltr2cysteinyl leukotriene receptor 2155490329054941742Rat
1589128LOC684557similar to mitochondrial ribosomal protein L40155496102854961711Rat
9379474LOC103693715uncharacterized LOC103693715155500544255015141Rat
735048Rcbtb2RCC1 and BTB domain containing protein 2155502938855074728Rat
3540Rb1RB transcriptional corepressor 1155508158255209060Rat
1595950Lpar6lysophosphatidic acid receptor 6155512695355128762Rat
620727Itm2bintegral membrane protein 2B155525470355277713Rat
2322692LOC1003601571110034B05Rik protein-like155538421355386074Rat
9202408LOC103693716uncharacterized LOC103693716155538965455398742Rat
1306671Med4mediator complex subunit 4155540654355416816Rat
1308292Nudt15nudix hydrolase 15155541777455456698Rat
11396216Trnae-uuc6transfer RNA glutamic acid (anticodon UUC) 6155546089755460968Rat
1309397Sucla2succinate-CoA ligase ADP-forming subunit beta155546169555516954Rat
11442651LOC108353003histidine-rich glycoprotein-like155554083155542246Rat
7688592LOC102547539uncharacterized LOC102547539155571931255721712Rat
11379490LOC108353004coronin-1B-like155589082855893358Rat
7737378LOC102546424uncharacterized LOC102546424155630215856304917Rat
7599070LOC102546539uncharacterized LOC102546539155653997456566090Rat
61800Htr2a5-hydroxytryptamine receptor 2A155666615256732469Rat
1592114Esdesterase D155675684856776348Rat
1595678Lrch1leucine rich repeats and calponin homology domain containing 1155677873856970439Rat
11356954LOC108352942uncharacterized LOC108352942155706383457080830Rat
1304929Rubcnlrubicon like autophagy enhancer155706551257109197Rat
7718136LOC10255740360S ribosomal protein L9-like155712533557130688Rat
1559507Lrrc63leucine rich repeat containing 63155713250757170467Rat
1308288Lcp1lymphocyte cytosolic protein 1155717056657277811Rat
9426518LOC103693882ice-structuring glycoprotein-like155717704657181995Rat
1310303Esco2-ps2establishment of cohesion 1 homolog 2 (S. cerevisiae), pseudogene 2155718543857188908Rat
71035Cpb2carboxypeptidase B2155729084957339762Rat
1594656LOC691812similar to RNA (guanine-9-) methyltransferase domain containing 2155730139357302708Rat
1307729Zc3h13zinc finger CCCH type containing 13155734052257405287Rat
1592168Siah3siah E3 ubiquitin protein ligase family member 3155750544957568743Rat
1561044Cby2chibby family member 2155764257657738383Rat
6491099Erich6bglutamate-rich 6B155769187557754684Rat
1592167LOC692005hypothetical protein LOC692005155771943857720329Rat
1304555Cog3component of oligomeric golgi complex 3155775381457805627Rat
1359702Slc25a30solute carrier family 25, member 30155781161257834173Rat
7699265LOC102552389uncharacterized LOC102552389155787913957883329Rat
621623Tpt1tumor protein, translationally-controlled 1155789168057894504Rat
7695025LOC102549099uncharacterized LOC102549099155791118957913069Rat
11388345LOC10835303840S ribosomal protein S29 pseudogene155793455857935150Rat
620772Gtf2f2general transcription factor IIF subunit 2155794205758068892Rat
1594637Kctd4potassium channel tetramerization domain containing 4155800628858021166Rat
9082307LOC103690313uncharacterized LOC103690313155810189358103895Rat
9142262LOC103693717uncharacterized LOC103693717155813945858148757Rat
1307254Gpalpp1GPALPP motifs containing 1155815350158171022Rat
1359440Nufip1nuclear FMR1 interacting protein 1155817116358201888Rat
9173655LOC103693718high mobility group protein HMG-I/HMG-Y-like155820239158203586Rat
11450795Trnae-uuc7transfer RNA glutamic acid (anticodon UUC) 7155822690358226974Rat
11484738LOC108352943uncharacterized LOC108352943155827867858304685Rat
11473269LOC10835303940S ribosomal protein S29 pseudogene155848298858483501Rat
11391647LOC108352944uncharacterized LOC108352944155852208658533928Rat
3850Tsc22d1TSC22 domain family, member 1155855435858658156Rat
11436928LOC108352945uncharacterized LOC108352945155866655358676336Rat
1566076Serp2stress-associated endoplasmic reticulum protein family member 2155868778458712023Rat
7631267LOC102556319uncharacterized LOC102556319155872408458727515Rat
9094045LOC103693719uncharacterized LOC103693719155882565858835169Rat
9163878LOC103693720uncharacterized LOC103693720155884011058847176Rat
9251176Smim2small integral membrane protein 2155891721758921811Rat
11507603LOC108352946uncharacterized LOC108352946155891871658924497Rat
7700048LOC102546462uncharacterized LOC102546462155905707259080629Rat
9125053LOC103693878uncharacterized LOC103693878155911116359115517Rat
11400677LOC108353005glyceraldehyde-3-phosphate dehydrogenase pseudogene155912563159159743Rat
2321506Ccdc122coiled-coil domain containing 122155915982259280538Rat
1310185Lacc1laccase domain containing 1155919953759217200Rat
1306118Enox1ecto-NOX disulfide-thiol exchanger 1155933113459884512Rat
9070688LOC103693721uncharacterized LOC103693721155944090059479902Rat
9335376LOC103693726uncharacterized LOC103693726155953287059609230Rat
7644262LOC102547243uncharacterized LOC102547243155962504759667096Rat
9182855LOC103693879uncharacterized LOC103693879155965142959655301Rat
1307154Dnajc15DnaJ heat shock protein family (Hsp40) member C15155999013160056710Rat
1563207Epsti1epithelial stromal interaction 1156008496660190360Rat
1560137Fam216bfamily with sequence similarity 216, member B156027653060303880Rat
9139000LOC103693730uncharacterized LOC103693730156029778360303880Rat
620784Tnfsf11TNF superfamily member 11156048252760512704Rat
7661800LOC102549816uncharacterized LOC102549816156067054760673568Rat
2079Akap11A-kinase anchoring protein 11156072213860766673Rat
7524446LOC102549880uncharacterized LOC102549880156076683260771293Rat
1561955Dgkhdiacylglycerol kinase, eta156079157460967236Rat
11447237LOC108353040uncharacterized LOC108353040156104916161052367Rat
1308772Vwa8von Willebrand factor A domain containing 8156106943961153292Rat
1308772Vwa8von Willebrand factor A domain containing 8156115851061467462Rat
1594607LOC691873similar to dead end homolog 1156129915761301283Rat
7497096LOC10255053140S ribosomal protein SA-like156144600261447995Rat
7592669LOC10255072360S ribosomal protein L17-like156147617261479568Rat
619721Rgccregulator of cell cycle156155186161564695Rat
6501536LOC100909790glutamine synthetase-like156158862361594990Rat
1584324Naa16N(alpha)-acetyltransferase 16, NatA auxiliary subunit156159705461655665Rat
1584329Mtrf1mitochondrial translation release factor 1156166200061689867Rat
6501695Kbtbd7kelch repeat and BTB domain containing 7156169204161696506Rat
1584320LOC686244similar to ribosomal protein S24156170140961701844Rat
6501416LOC10090989560S ribosomal protein L15-like156170730261708299Rat
1305086Kbtbd6kelch repeat and BTB domain containing 6156173157461733331Rat
620033Wbp4WW domain binding protein 4156174598961772516Rat
620697Elf1E74 like ETS transcription factor 1156177254461868442Rat
11379973Trnae-uuc8transfer RNA glutamic acid (anticodon UUC) 8156177265761772728Rat
7702568LOC102552221microfibrillar-associated protein 1-like156180675161815098Rat
2324592LOC100360244LRRGT00053-like156187256461873406Rat
1307550Sugt1SGT1 homolog, MIS12 kinetochore complex assembly cochaperone156187315861913983Rat
620176Cnmdchondromodulin156192329161947840Rat
9478553LOC103693884vegetative cell wall protein gp1-like156198368961984519Rat
2325470Mir759microRNA 759156202549462025590Rat
69350Pcdh8protocadherin 8156219646962201498Rat
11434381LOC108352947uncharacterized LOC108352947156224867662262198Rat
7735895LOC102553037uncharacterized LOC102553037156231338162383468Rat
1311708Olfm4olfactomedin 4156238426362429450Rat
7590885LOC102553139uncharacterized LOC102553139156244977462466611Rat
7536054LOC102553204uncharacterized LOC102553204156247288662490552Rat
1564564LOC306079similar to RIKEN cDNA 3100001N19156252095362532175Rat
1592157LOC692015similar to cytochrome P450, family 2, subfamily c, polypeptide 66156384753363876306Rat
9685073Mir1297microRNA 1297156386113963861212Rat
1592156LOC692016similar to sorbitol dehydrogenase 1156413990464140957Rat
2320681LOC10036118040S ribosomal protein S17-like156419056164191115Rat
11436659LOC108353006ATP synthase subunit d, mitochondrial pseudogene156422282964224081Rat
11518631LOC108353041igE-binding protein-like156423136364232343Rat
7672387LOC102554138uncharacterized LOC102554138156546420965481580Rat
1597679Calm-ps2calmodulin pseudogene 2156550686665507984Rat
9466192LOC103693740cytochrome b-c1 complex subunit 7 pseudogene156616552966165852Rat
2320484LOC100361279hypothetical LOC100361279156635923566359536Rat
9205700LOC103693880uncharacterized LOC103693880156754336567552989Rat
1304753Pcdh17protocadherin 17156755583567647990Rat
11379167LOC108352949uncharacterized LOC108352949156756769067588470Rat
9388791LOC103693741uncharacterized LOC103693741156772053667736644Rat
9181282LOC103693744uncharacterized LOC103693744156903092969039599Rat
9401250LOC103693745uncharacterized LOC103693745156903976669056040Rat
1593287Diaph3diaphanous-related formin 3156992850770400077Rat
11369296LOC108352950uncharacterized LOC108352950157025820770264102Rat
2320163LOC100361402hypothetical LOC100361402157066548670666082Rat
1310126Tdrd3tudor domain containing 3157073216470864855Rat
6496491LOC10091076640S ribosomal protein SA-like157126519371278620Rat
11410098LOC108353007probable 28S rRNA (cytosine-C(5))-methyltransferase pseudogene157126564271270953Rat
1592113LOC290412similar to Pyruvate kinase isozymes M1/M2 (Pyruvate kinase muscle isozyme)157166494171666594Rat
1306297Pcdh20protocadherin 20157177277771779033Rat
9333309LOC103693748uncharacterized LOC103693748157193931672081857Rat
2320118LOC100361447hypothetical LOC100361447157278728572788287Rat
1592151LOC692021similar to 3-phosphoglycerate dehydrogenase157317942273180954Rat
7552264LOC102547864uncharacterized LOC102547864157394584173988928Rat
7514870LOC102546540MLV-related proviral Env polyprotein-like157406427274066082Rat
7554821LOC102546958MLV-related proviral Env polyprotein-like157418590874187788Rat
7651565LOC102546653uncharacterized LOC102546653157429492674307648Rat
2319690LOC100361683cyclin-dependent kinase 4157480876774811660Rat
1595677LOC502026similar to non-POU domain containing, octamer-binding157482548574867513Rat
1590791LOC498555similar to 60S acidic ribosomal protein P2157506728475067724Rat
11432064LOC108353008endogenous retrovirus group K member 9 Pol protein-like157542181275423634Rat
1306348Pcdh9protocadherin 9157678710877738668Rat
1595676LOC502027similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin)157797641477982201Rat
11410099LOC108353042uncharacterized LOC108353042157842048878425290Rat
1592146LOC692026similar to mesenchymal stem cell protein DSC92157900057979001317Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10672D15Mgh12136154444097944441076Ratregion
11235D15Wox6155264772652647946Ratregion
33868D15Mit7224155887254658872733Ratregion
34094D15Mit8150156020287460203023Ratregion
34353D15Mgh2141155726493757265073Ratregion
34471D15Mgh3149156259626162596410Ratregion
34471D15Mgh3149156259528162596410Ratregion
34619D15Mgh11142155135360551353746Ratregion
11456D15Wox2200154265878042658960Ratregion
35991D15Rat10176154660727446607460Ratregion
36013D15Rat34162155246758252467743Ratregion
36061D15Rat13172154781428647814460Ratregion
36189D15Rat17178154902741649027615Ratregion
36293D15Rat35146154471941044719555Ratregion
37206D15Rat56101155078160050781698Ratregion
37276D15Rat68132156349893263499071Ratregion
35362D15Rat19170155752897057529125Ratregion
35455D15Rat20151155961627559616425Ratregion
36880D15Rat15175154411663344116807Ratregion
37192D15Rat133200155651801056518225Ratregion
37196D15Rat132144154900248549002640Ratregion
37620D15Rat74176155942230659422486Ratregion
37666D15Rat64108154676908246769193Ratregion
37696D15Rat59208156489802964898252Ratregion
37794D15Rat48200156230117762301382Ratregion
37918D15Rat39236156231502162315262Ratregion
37954D15Rat61134155070046550700600Ratregion
36594D15Rat7172154241908742419258Ratregion
36663D15Rat21159157576102475761216Ratregion
36697D15Rat8212154606470646064949Ratregion
34805D15Rat32102155602698356027084Ratregion
34910D15Rat14156154309747043097613Ratregion
35090D15Rat9149154637643346376584Ratregion
35611D15Rat11131155283103952831189Ratregion
35661D15Rat33125155241000352410127Ratregion
35737D15Rat12158154887891848879075Ratregion
35757D15Rat16141155443966954439793Ratregion
38030D15Rat43201154270527442705452Ratregion
38128D15Rat72154154277722142777333Ratregion
40554D15Rat93173156356800963568179Ratregion
40606D15Rat122171155751660857516778Ratregion
40674D15Rat86238154108249041082727Ratregion
40084D15Rat117169153974955739749725Ratregion
38846D15Rat46207155692980356930017Ratregion
39192D15Rat47200157383734073837547Ratregion
39404D15Rat91200154808029748080498Ratregion
39458D15Rat95209157055942070559628Ratregion
39490D15Rat112143155120967151209812Ratregion
41926D15Rat37160156046377860463937Ratregion
42006D15Arb2219156836650868366737Ratregion
42008D15Arb4147154755316747553794Ratregion
42008D15Arb4147154755316747553313Ratregion
42012D15Arb6234154444093544441175Ratregion
41332D15Rat94171157707214677072316Ratregion
43044D15Rat119234154656052346560734Ratregion
43046D15Rat149247154653385246534086Ratregion
43047D15Rat120117154911104149111151Ratregion
43048D15Rat143148154908161949081759Ratregion
43049D15Rat144241154262498742625327Ratregion
43050D15Rat147238154262498742625324Ratregion
43051D15Rat146205155755422657554427Ratregion
43052D15Rat148114155796534057965439Ratregion
42404D15Rat171104154122096841221071Ratregion
42405D15Rat164202154490397544904173Ratregion
42406D15Rat165125155998202059982144Ratregion
42407D15Rat151234157591225275913292Ratregion
40882D15Rat97224157903348479033707Ratregion
41010D15Rat96157157256801772568189Ratregion
41114D15Rat89224155353553753535766Ratregion
41636D15Rat123133155965115159651287Ratregion
41708D15Rat125135157011326570113399Ratregion
41804D15Rat121101155902767959027796Ratregion
45595D18Got3281157881821178819827Ratregion
60117D15Got70156156246004362460198Ratregion
60118D15Got73139156180747461807612Ratregion
60087D15Got110205155456966254569866Ratregion
60087D15Got110205155455481454555018Ratregion
60091D15Got23105154026961740269718Ratregion
45243D15Got33120154096270940962825Ratregion
45244D15Got31189154213772342137911Ratregion
45257D15Got35133153984491339845045Ratregion
45259D15Got37134154221658442216717Ratregion
45262D15Got38173154537543445375606Ratregion
45263D15Got43164154779181947791986Ratregion
45264D15Got44225154766091347661137Ratregion
45265D15Got47161154911097949111138Ratregion
45266D15Got48214154892259148922804Ratregion
45267D15Got46266154375550843755769Ratregion
45268D15Got51225154309968943099913Ratregion
45269D15Wox3123154282055842820674Ratregion
45270D15Got50252154335801643358267Ratregion
45271D15Got49159154355104843551206Ratregion
45273D15Got111135156404079664040930Ratregion
45274D15Got72205156701317167013378Ratregion
45275D15Got60197155753848957538682Ratregion
625835D15Got115200155960394759604146Ratregion
629593D15Hmgc1115154149717941497293Ratregion
60098D15Got40159154159756241597720Ratregion
60101D15Got53148155089082450890966Ratregion
60102D15Got54281155077402650774306Ratregion
60103D15Got55208155104528251045489Ratregion
60104D15Got56254155139090251391155Ratregion
60105D15Got57297155476064554760941Ratregion
60106D15Got58152155324250353242654Ratregion
60107D15Got59203155588407255884274Ratregion
60108D15Got61246155939346959393714Ratregion
60109D15Got62210155866009258660301Ratregion
60110D15Got63189155853649058536678Ratregion
60111D15Got64164155996529559965458Ratregion
60112D15Got65107156130766461307770Ratregion
60113D15Got66176156082929860829473Ratregion
60114D15Got67122156069831960698440Ratregion
60115D15Got68279156205067862050955Ratregion
60116D15Got69210156272761962727828Ratregion
62444D15Uia2128154305993243060058Ratregion
62451D15Uia4178156254978862549965Ratregion
66544D15Mco14170154103526641035441Ratregion
66545D15Mco15168156357820463578369Ratregion
66640D15Mco5223155096175550961967Ratregion
66644D15Mco7170154252031742520495Ratregion
67268D15Arb7219155135352651353744Ratregion
1630632D15Got219138156041791360418050Ratregion
1631578D15Got231171157386127073861440Ratregion
1631609D15Uwm1156154348096943481124Ratregion
1631763D15Got206123156183498261835099Ratregion
1631895D15Got229141155193985651939996Ratregion
1632295D15Wox8277154265082742651103Ratregion
1578970D10Chm51170154225346042253515Ratregion
1627753D15Got212172157539782075397991Ratregion
1628345D15Got233178157106162071061797Ratregion
1628726D15Got209163157412898474129146Ratregion
1629296D15Got210117157383735673837472Ratregion
1629889D15Got22296157144399971444089Ratregion
1640782D15Got243144156989563869895776Ratregion
1641695D15Got247188156943951869439705Ratregion
1640020D15Got244191154608175446081944Ratregion
1640756D15Wox4202155135354351353744Ratregion
1635017D15Got225267156998058469980850Ratregion
1635632D15Got21177157699170376991779Ratregion
1635969D15Got109167155223377852233945Ratregion
1636394D15Wox14269155089111850891386Ratregion
1637081D15Got227215154777051447770728Ratregion
1637180D15Got218182155620525256205427Ratregion
1637264D15Got208263157378333473783591Ratregion
1633890D15Got204145156181029061810434Ratregion
1634372D15Got230142154901322349013364Ratregion
1634547D15Uia10237154188214941882385Ratregion
7205958Fam123a63154066643640666498Ratregion
7192202Gata41209154639109246392300Ratregion
7192222D15Mgh3149156259626062596410Ratregion
7192222D15Mgh3149156259528062596410Ratregion
7192344Gata4186154638820646389335Ratregion
5038784RH127330196154633828746338482Ratregion
5036071Adam2186154270846642708651Ratregion
5038840RH127363186156159821061598898Ratregion
5038878RH127385200157900139679001588Ratregion
7206382fj36f03.x10155175012851751433Ratregion
7206534UniSTS:546922999157678724876788246Ratregion
7206748ha24360157275099572751679Ratregion
5036279Egr5-rs191155865764658657836Ratregion
5036336Hars129156130094761301075Ratregion
5036428Nfm221154485566644855886Ratregion
5039102RH127513215157506744375067657Ratregion
5036737AU049042281154239608242396360Ratregion
5036887AU049518237156152489861525134Ratregion
5037005AU049892298157606616876066465Ratregion
5035542Mrpl400155496108054961493Ratregion
5035649RH45841138157678741176787548Ratregion
5031282PMC125376P1222154485531644855537Ratregion
5025964RH130377196154860147148601666Ratregion
5028627RH124140158155136106551362317Ratregion
5028709RH18022211155090284950903059Ratregion
5026258RH131524194154630176146301954Ratregion
5026262RH131539182154051813240518313Ratregion
5028869RH142637122155527284255272963Ratregion
5031670AU047541219157360312473603337Ratregion
5034331AI548197192154339308543393276Ratregion
5031696AU047454131157478072374780853Ratregion
5031730AU047341186154203577742035962Ratregion
5034392WI-9274117155556502555565141Ratregion
5029099RH143518275156129969161299965Ratregion
5029159RH143738142154176482641764968Ratregion
5034592BF416622164154715045047150616Ratregion
5026602RH132838218155679125556791472Ratregion
5029293RH144249100155801981258019911Ratregion
5029327RH144377278154376909143769368Ratregion
5029456D15Rat87159154004939440049552Ratregion
5032197RH126495232154854037948540610Ratregion
5032197RH126495232154841123248411463Ratregion
5032231U58889111155185946151859571Ratregion
5029707BE096152169155921560759215775Ratregion
5029729BE102165149157739761377397761Ratregion
5029741BE102295207154130592741306133Ratregion
5029831BI278614169155216661652166784Ratregion
5032545WI-18898142154367408743674228Ratregion
5032627RH134704217156146714461467415Ratregion
5034982Chrna2292154282345542823746Ratregion
5035292AI102486152154297655642976707Ratregion
5027477AW04987096155277837052778465Ratregion
5027477AW04987096155215996252160057Ratregion
5027479AW31965586155781288957812974Ratregion
5033015RH137283212156992856069928771Ratregion
5027641AU016692145155183504351835187Ratregion
5030283BE111829183154265660442656786Ratregion
5027821RH94875227155508298455083210Ratregion
5025392RH128138186154282659942826784Ratregion
502791330.MMHAP14FRB12.seq108154916839749168504Ratregion
5033391RH138668202154859324848593449Ratregion
5025486RH128506187154633933046339516Ratregion
5028165D14Mit157108154430300844303115Ratregion
5030809BE120275174154294300942943182Ratregion
5030827BE120472164154060117140601334Ratregion
5033613RH139464194155740486557405058Ratregion
5033613RH139464194154595889545959088Ratregion
5033615RH139472208154578005845780265Ratregion
5033659RH139634180154917679049176969Ratregion
5025758RH129548182154059700240597183Ratregion
5031031BE121260161154819039748190557Ratregion
5025812RH129773152156134420961344360Ratregion
5028561MHAa29c11.seq194154531140945311602Ratregion
5031057BE115404159154863298048633136Ratregion
5051949RH94752169155221292652213095Ratregion
5055155RH143637145155229091252291056Ratregion
5051146RH134466180155815096958151147Ratregion
5056095RH144180192154637187446372065Ratregion
5056247RH144268104154720403647204139Ratregion
5056253RH144272207154536062145360827Ratregion
5056421RH144368156156168957261689727Ratregion
5051545M2639183155508318855083270Ratregion
5051549U1961767156186769461867760Ratregion
5056517RH144424165154820563048205794Ratregion
5056663RH144508201154486547744865677Ratregion
5056763RH144566166156019014060190305Ratregion
5051947RH94751120155221175152211876Ratregion
5051951RH94753190155221360352213794Ratregion
5054357RH143178184154613023746130420Ratregion
5057388AA89300295156079157160791665Ratregion
5052139RH94862174154638686246387035Ratregion
5054483RH143250215154297501842975232Ratregion
5054515RH143269209154443780644438014Ratregion
5054689RH143369132154176540841765539Ratregion
5059432AW530810178154637109346371270Ratregion
5059472AW52444796154152998541530080Ratregion
5057720BF386087180154194044541940624Ratregion
5057728BF392677106154843077848430883Ratregion
5055559RH143871159155217093152171089Ratregion
5055585RH143886127155183496451835090Ratregion
5054859RH143466152155481199154812142Ratregion
5055049RH143576113156175912861759240Ratregion
5055059RH143582119155187043551870553Ratregion
5058682BI284489177154347648543476661Ratregion
5056009RH144130237154051200740512243Ratregion
5056339RH144321154154019546840195621Ratregion
5059692BE097649184155883490058835285Ratregion
5056457RH144389146156080000160800146Ratregion
505220328.MMHAP16FRB10.seq169155166082451660992Ratregion
505221542.MMHAP38FLF6.seq182156219700562197186Ratregion
5058052BE101893153155546175055461902Ratregion
5058064BF386528161155947968359479843Ratregion
5056757RH144562156157177365771773812Ratregion
5052533AI451877121154819484248194962Ratregion
5052763RH142259158155525537955255536Ratregion
5058976BE102662172157716499477165165Ratregion
5059830BE103347183156174751961747701Ratregion
5055689RH143945104154339702743397130Ratregion
5055763RH143988154155617839056178543Ratregion
5059960BF388234157156754516767545323Ratregion
5059976BF388284152155947873159478882Ratregion
5058258BI277866154153996462439964777Ratregion
5050048RH133832216154634086746341082Ratregion
5052287MDB0514142154302563243025773Ratregion
5058400AI05870790155919956959199658Ratregion
5059068BF387401151155937413259374282Ratregion
5053751RH142830170154151458841514757Ratregion
5050862RH134301190155226098252261171Ratregion
5051090RH134434208156174615461746361Ratregion
5054137RH143051156156079720960797364Ratregion
5054293RH143141223155676027056760492Ratregion
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5050536RH134113188154643671246436899Ratregion
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5044734RH130773214155868782658688039Ratregion
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5041822RH129078184155223826152238444Ratregion
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5044436RH130602181154666806346668243Ratregion
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5042208RH129302180155525535555255534Ratregion
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5039682RH127846209155212956452129772Ratregion
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5042380RH129401197155216007552160271Ratregion
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5048638RH133019182155971401659714197Ratregion
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5040208RH128151157154067475440674910Ratregion
5042662RH129569175155136903751369211Ratregion
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5043896RH130291180154633743346337612Ratregion
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5041310RH128783220154727000247270221Ratregion
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5075270RH138497150155781294857813097Ratregion
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5061600BF402156130155814751058147639Ratregion
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5087444PMC179881P1499155090236950902867Ratregion
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5087951Htr2a199155673198356732181Ratregion
5088969AU048876198154078331740783512Ratregion
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5083653BI276640195155465940354659597Ratregion
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5089715AU049320261156181029661810556Ratregion
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5084512AI234674188154669587046696057Ratregion
5090071AU049533179155737349557373673Ratregion
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5087753D10Bir60155689142056891535Ratregion
5082207BI274165151154546446145464611Ratregion
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5085521BQ210369210153997585439976063Ratregion
5090787AU049963287154623931046239594Ratregion
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5085137BQ200206214157095225670952469Ratregion
5085298BQ195852215154722972247229936Ratregion
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5088671AU048707178154774044247740619Ratregion
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5081072RH141949196154194373041943925Ratregion
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5085998AW535983150156119760361197752Ratregion
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5080720RH141743200154669730546697504Ratregion
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5081046RH141933219153986932239869540Ratregion
5081130RH141982198155226766052267857Ratregion
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5081591BF420646165154127461541274779Ratregion
5085609BQ201795220156169627561696494Ratregion
5085697AI176781200154633890346339102Ratregion
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5086711BM386690213156257732262577534Ratregion
5086717BE106576157154160071341600869Ratregion
5081821BI273777113155727668257276794Ratregion
5503048Fzd3160154864632048646479Ratregion
5503216UniSTS:237223210155183477951834988Ratregion
5503218UniSTS:237232198156992859069928787Ratregion
5503400D17S1860655155173995851740612Ratregion
5503656Nefl440154480214544803118Ratregion
5503662UniSTS:465485335154485566344855997Ratregion
5504036px-39f10692157462800574628696Ratregion
5504066px-59g3108157165054371650650Ratregion
5504284D20S527E163155235793052358092Ratregion
5504354D13S663E98154169827541698372Ratregion
5505083Sftpc113155221283752213203Ratregion
5505056Fgf17200155232685252327051Ratregion
5505302Ppp2r2a153154368018643680338Ratregion
5504879ha29890155141910651420189Ratregion
5504975Gata4146154638819346389282Ratregion
5505136Clu116154266436142665219Ratregion
5505893UniSTS:49600598154282285942822956Ratregion
5506045UniSTS:498231402154410145344101854Ratregion
5506358UniSTS:478958303154914300049143302Ratregion
5506747G45129236155667338256673617Ratregion
5506845G46467139155563691255637050Ratregion
5506785G45372202156961265269612853Ratregion
5501151PMC15073P3300154480210044802933Ratregion
5500228AW53853785154249968042499764Ratregion
5502571RH12540599154124803541248133Ratregion
5501025PMC123165P1506154329899343299498Ratregion
5501097PMC134715P392154410102544101116Ratregion
5501157PMC150908P476154329970943299784Ratregion
5501914MARC_17376-17377:1021902296:2116155236061352362118Ratregion
5502196MARC_8253-8254:996688461:1385155817460858175007Ratregion
5502774LOC144997109156764581667645924Ratregion
5502513RH12512793154253464642534738Ratregion
5502541RH125214159154302566443025822Ratregion
10755493rs66061982154682507246825072Ratregion
Position Markers

Flank 1: (D15Rat117)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01539,749,557 - 39,749,725NCBI
Rnor_5.01543,570,947 - 43,571,115UniSTS
RGSC_v3.41538,542,534 - 38,542,702UniSTS
RGSC_v3.41538,542,355 - 38,542,760RGD
RGSC_v3.11538,558,234 - 38,558,402RGD
Celera1533,317,589 - 33,317,757UniSTS
RH 3.4 Map15230.1RGD
RH 3.4 Map15230.1UniSTS
SHRSP x BN Map1527.8098UniSTS
SHRSP x BN Map1527.8098RGD
Peak: (D15Rat117)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01539,749,557 - 39,749,725NCBI
Rnor_5.01543,570,947 - 43,571,115UniSTS
RGSC_v3.41538,542,534 - 38,542,702UniSTS
RGSC_v3.41538,542,355 - 38,542,760RGD
RGSC_v3.11538,558,234 - 38,558,402RGD
Celera1533,317,589 - 33,317,757UniSTS
RH 3.4 Map15230.1RGD
RH 3.4 Map15230.1UniSTS
SHRSP x BN Map1527.8098UniSTS
SHRSP x BN Map1527.8098RGD
Flank 2: (D15Rat97)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01579,033,484 - 79,033,707NCBI
Rnor_5.01582,573,157 - 82,573,380UniSTS
RGSC_v3.41578,048,029 - 78,048,493RGD
RGSC_v3.41578,048,256 - 78,048,479UniSTS
RGSC_v3.11578,063,809 - 78,064,273RGD
SHRSP x BN Map1541.3598UniSTS
SHRSP x BN Map1541.3598RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15142844179Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15143521446Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15162301382Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15232787753535766Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)15388113148881131Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151071919155719191Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151549236072568189Rat
9590272Scort14Serum corticosterone level QTL 142.780.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)151698090761980907Rat
8694427Bw163Body weight QTL 1634.820.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)151698090761980907Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151724964162249641Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151724964162249641Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151724964162249641Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151809320881255430Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151851391388036354Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)152102134241082727Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)152102134252831189Rat
10755503Bp391Blood pressure QTL 3912.37arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)152377896946825072Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1526381041106550657Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)1526381041106550657Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)1526381041106550657Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152870974173709741Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)153321910189640841Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)153321910189640841Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)153321910189640841Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)153321910189640841Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)153321910189640841Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)153948079762596410Rat
2293686Bmd36Bone mineral density QTL 367.40.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)153974955779033707Rat
2293691Bmd37Bone mineral density QTL 376.60.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)153974955779033707Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)154106809486068094Rat
7411725Strs7Sensitivity to stroke QTL 73.8cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)154275724156027084Rat
2306968Anxrr23Anxiety related response QTL 234.83reflex trait (VT:0001961)amplitude of the acoustic startle response (CMO:0001520)154309747052831189Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1543097470106550657Rat
724545Niddm54Non-insulin dependent diabetes mellitus QTL 540.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)155752897081263988Rat
2317050Aia24Adjuvant induced arthritis QTL 242.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)155965115181255430Rat
1576315Schws6Schwannoma susceptibility QTL 60.0069nervous system integrity trait (VT:0010566)post-insult time of death (CMO:0002005)1561447766106447766Rat
61477Aia4Adjuvant induced arthritis QTL 43joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)156259641099372139Rat
631516Gluco31Glucose level QTL 317blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1562596410103164962Rat
631655Bp126Blood pressure QTL 1264arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1565520564110520564Rat
2313080Bss65Bone structure and strength QTL 653.90.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)156836650881255430Rat
731177Uae26Urinary albumin excretion QTL 262.40.025urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1575527634111246239Rat
2300326Plaw1Placental weight QTL 1150.005placenta mass (VT:0004257)placenta wet weight (CMO:0002088)1575761024109400896Rat
724548Niddm55Non-insulin dependent diabetes mellitus QTL 550.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)157576121681263843Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general number of animals used: 405 males and 423 females from F2 progeny 2293456
qtl_general measurement method: at 26 weeks of age femur was removed and frozen at -20oC, later slices were cut from the midshaft and distal region and measurements taken from pQCT images 2293456
qtl_general software package: MAPMAKER/EXP 2293456
qtl_general allele: DA alleles cause stronger skeletal structure and strength 2293456
qtl_statistics_details LOD of 6.6 was recorded for males 2293456