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Gene: Clk1 (CDC-like kinase 1) Rattus norvegicus
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Symbol: Clk1
Name: CDC-like kinase 1
Description: Predicted to have protein serine/threonine kinase activity and protein tyrosine kinase activity. Predicted to be involved in cellular protein modification process and regulation of RNA splicing. Localizes to the cytoplasm. Orthologous to human CLK1 (CDC like kinase 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: dual specificity protein kinase CLK1; LOC301434
Orthologs:
Homo sapiens (human) : CLK1 (CDC like kinase 1)  HGNC  Alliance
Mus musculus (house mouse) : Clk1 (CDC-like kinase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clk1 (CDC like kinase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CLK1 (CDC like kinase 1)
Canis lupus familiaris (dog) : CLK1 (CDC like kinase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clk1 (CDC like kinase 1)
Sus scrofa (pig) : CLK1 (CDC like kinase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0965,296,777 - 65,308,017 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0965,104,068 - 65,115,289 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4957,070,825 - 57,082,043 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1957,217,806 - 57,229,025 (-)NCBI
Celera957,390,465 - 57,401,657 (-)NCBICelera
Cytogenetic Map9q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clk1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311469
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.