Symbol:
Eea1
Name:
early endosome antigen 1
RGD ID:
1310167
Description:
Predicted to enable 1-phosphatidylinositol binding activity; GTP-dependent protein binding activity; and protein homodimerization activity. Predicted to be involved in chemical postsynaptic transmission; endocytosis; and vesicle fusion. Located in recycling endosome. Is active in presynaptic endosome. Orthologous to human EEA1 (early endosome antigen 1); PARTICIPATES IN endocytosis pathway; phagocytosis pathway; tuberculosis pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,6-dinitrotoluene.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC314764
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
EEA1 (early endosome antigen 1) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Eea1 (early endosome antigen 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Eea1 (early endosome antigen 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
EEA1 (early endosome antigen 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
EEA1 (early endosome antigen 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Eea1 (early endosome antigen 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
EEA1 (early endosome antigen 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
EEA1 (early endosome antigen 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Eea1 (early endosome antigen 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
CCDC110 (coiled-coil domain containing 110) HGNC
PhylomeDB
Homo sapiens (human):
ALKBH6 (alkB homolog 6) HGNC
OMA
Alliance orthologs 3
Homo sapiens (human):
EEA1 (early endosome antigen 1)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Eea1 (early endosome antigen 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
eea1 (early endosome antigen 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
eea-1
Alliance
DIOPT (Ensembl Compara|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
eea1
Alliance
DIOPT (Ensembl Compara|OMA|OrthoFinder|PANTHER|PhylomeDB)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 32,441,281 - 32,608,808 (+) NCBI GRCr8 mRatBN7.2 7 30,554,686 - 30,722,186 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 30,554,552 - 30,718,487 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 7 37,101,415 - 37,186,534 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 37,018,459 - 37,186,732 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 37,144,373 - 37,233,282 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 33,294,184 - 33,396,666 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 7 33,311,103 - 33,413,833 (+) NCBI Celera 7 27,696,956 - 27,782,232 (+) NCBI Celera Cytogenetic Map 7 q13 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Eea1 Rat (-)-epigallocatechin 3-gallate multiple interactions ISO RGD:1320911 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of EEA1 mRNA CTD PMID:22079256 Eea1 Rat (1->4)-beta-D-glucan multiple interactions ISO RGD:1320912 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of EEA1 mRNA CTD PMID:36331819 Eea1 Rat 1,2-dimethylhydrazine decreases expression ISO RGD:1320912 6480464 1,2-Dimethylhydrazine results in decreased expression of EEA1 mRNA CTD PMID:22206623 Eea1 Rat 2,2',4,4'-Tetrabromodiphenyl ether decreases expression ISO RGD:1320911 6480464 2,2',4,4'-tetrabromodiphenyl ether results in decreased expression of EEA1 protein CTD PMID:31675489 Eea1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of EEA1 mRNA CTD PMID:33387578 Eea1 Rat 2,3,7,8-Tetrachlorodibenzofuran decreases expression EXP 6480464 2,3,7,8-tetrachlorodibenzofuran results in decreased expression of EEA1 mRNA CTD PMID:32109520 Eea1 Rat 2,4,6-tribromophenol increases expression ISO RGD:1320911 6480464 2,4,6-tribromophenol results in increased expression of EEA1 mRNA CTD PMID:31675489 Eea1 Rat 2,6-dimethoxyphenol multiple interactions ISO RGD:1320911 6480464 [pyrogallol 1,3-dimethyl ether co-treated with Furaldehyde] results in decreased expression of and affects the localization more ... CTD PMID:38598786 Eea1 Rat 2,6-dinitrotoluene affects expression EXP 6480464 2,6-dinitrotoluene affects the expression of EEA1 mRNA CTD PMID:21346803 Eea1 Rat 2-bromohexadecanoic acid multiple interactions ISO RGD:1320911 6480464 2-bromopalmitate inhibits the reaction [[Cadmium Chloride results in increased abundance of Cadmium] which results in more ... CTD PMID:38195004 Eea1 Rat 3,3',5,5'-tetrabromobisphenol A increases expression ISO RGD:1320912 6480464 tetrabromobisphenol A results in increased expression of EEA1 mRNA CTD PMID:25172293 Eea1 Rat 3,4-methylenedioxymethamphetamine decreases expression ISO RGD:1320912 6480464 N-Methyl-3,4-methylenedioxyamphetamine results in decreased expression of EEA1 mRNA CTD PMID:26251327 Eea1 Rat acrylamide increases expression EXP 6480464 Acrylamide results in increased expression of EEA1 mRNA CTD PMID:28959563 Eea1 Rat aflatoxin B1 increases expression ISO RGD:1320912 6480464 Aflatoxin B1 results in increased expression of EEA1 mRNA CTD PMID:19770486 Eea1 Rat aristolochic acid A decreases expression ISO RGD:1320911 6480464 aristolochic acid I results in decreased expression of EEA1 mRNA CTD PMID:33212167 Eea1 Rat arsane affects methylation ISO RGD:1320911 6480464 Arsenic affects the methylation of EEA1 gene CTD PMID:25304211 Eea1 Rat arsenic atom affects methylation ISO RGD:1320911 6480464 Arsenic affects the methylation of EEA1 gene CTD PMID:25304211 Eea1 Rat arsenite(3-) multiple interactions ISO RGD:1320911 6480464 arsenite inhibits the reaction [G3BP1 protein binds to EEA1 mRNA] CTD PMID:32406909 Eea1 Rat benzo[a]pyrene diol epoxide I decreases expression ISO RGD:1320911 6480464 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide results in decreased expression of EEA1 mRNA CTD PMID:19150397 Eea1 Rat bis(2-ethylhexyl) phthalate decreases expression ISO RGD:1320912 6480464 Diethylhexyl Phthalate results in decreased expression of EEA1 mRNA CTD PMID:33754040 Eea1 Rat bisphenol A increases expression ISO RGD:1320912 6480464 bisphenol A results in increased expression of EEA1 mRNA CTD PMID:21932408|PMID:26063408 Eea1 Rat bisphenol A decreases expression ISO RGD:1320912 6480464 bisphenol A results in decreased expression of EEA1 mRNA CTD PMID:33221593 Eea1 Rat bisphenol A increases expression ISO RGD:1320911 6480464 bisphenol A results in increased expression of EEA1 protein CTD PMID:37567409 Eea1 Rat bisphenol A increases methylation EXP 6480464 bisphenol A results in increased methylation of EEA1 gene CTD PMID:28505145 Eea1 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of EEA1 mRNA CTD PMID:25181051 Eea1 Rat bisphenol AF increases expression ISO RGD:1320911 6480464 bisphenol AF results in increased expression of EEA1 protein CTD PMID:34186270 Eea1 Rat Bisphenol B increases expression ISO RGD:1320911 6480464 bisphenol B results in increased expression of EEA1 protein CTD PMID:34186270 Eea1 Rat bisphenol F increases expression ISO RGD:1320912 6480464 bisphenol F results in increased expression of EEA1 mRNA CTD PMID:35387338 Eea1 Rat bromobenzene increases expression EXP 6480464 bromobenzene results in increased expression of EEA1 mRNA CTD PMID:32479839 Eea1 Rat cadmium atom multiple interactions ISO RGD:1320911 6480464 2-bromopalmitate inhibits the reaction [[Cadmium Chloride results in increased abundance of Cadmium] which results in more ... CTD PMID:38195004 Eea1 Rat cadmium dichloride decreases expression ISO RGD:1320912 6480464 Cadmium Chloride results in decreased expression of EEA1 mRNA CTD PMID:24982889 Eea1 Rat cadmium dichloride multiple interactions ISO RGD:1320911 6480464 2-bromopalmitate inhibits the reaction [[Cadmium Chloride results in increased abundance of Cadmium] which results in more ... CTD PMID:38195004 Eea1 Rat cadmium dichloride increases expression ISO RGD:1320911 6480464 Cadmium Chloride results in increased expression of EEA1 mRNA CTD PMID:26472689 Eea1 Rat cadmium sulfate multiple interactions ISO RGD:1320911 6480464 [cadmium sulfate co-treated with cobaltous chloride co-treated with lead chloride] results in increased expression of more ... CTD PMID:18654764 Eea1 Rat caffeine decreases phosphorylation ISO RGD:1320911 6480464 Caffeine results in decreased phosphorylation of EEA1 protein CTD PMID:35688186 Eea1 Rat chloroquine affects localization ISO RGD:1320911 6480464 Chloroquine affects the localization of EEA1 protein CTD PMID:29940786 Eea1 Rat cisplatin decreases expression ISO RGD:1320911 6480464 Cisplatin results in decreased expression of EEA1 mRNA CTD PMID:27392435 Eea1 Rat clobetasol decreases expression ISO RGD:1320912 6480464 Clobetasol results in decreased expression of EEA1 mRNA CTD PMID:27462272 Eea1 Rat cobalt dichloride multiple interactions ISO RGD:1320911 6480464 [cadmium sulfate co-treated with cobaltous chloride co-treated with lead chloride] results in increased expression of more ... CTD PMID:18654764 Eea1 Rat crocidolite asbestos increases expression ISO RGD:1320911 6480464 Asbestos, Crocidolite results in increased expression of EEA1 mRNA CTD PMID:18687144 Eea1 Rat deguelin increases expression ISO RGD:1320911 6480464 deguelin results in increased expression of EEA1 mRNA CTD PMID:33512557 Eea1 Rat Dibutyl phosphate affects expression ISO RGD:1320911 6480464 di-n-butylphosphoric acid affects the expression of EEA1 mRNA CTD PMID:37042841 Eea1 Rat dibutyl phthalate increases expression ISO RGD:1320912 6480464 Dibutyl Phthalate results in increased expression of EEA1 mRNA CTD PMID:21266533 Eea1 Rat dorsomorphin multiple interactions ISO RGD:1320911 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ... CTD PMID:27188386 Eea1 Rat doxorubicin decreases expression ISO RGD:1320911 6480464 Doxorubicin results in decreased expression of EEA1 mRNA CTD PMID:29803840 Eea1 Rat ethanol decreases expression EXP 6480464 Ethanol results in decreased expression of EEA1 protein CTD PMID:20133374 Eea1 Rat ethyl methanesulfonate increases expression ISO RGD:1320911 6480464 Ethyl Methanesulfonate results in increased expression of EEA1 mRNA CTD PMID:23649840 Eea1 Rat fluoranthene multiple interactions ISO RGD:1320912 6480464 [1-methylanthracene co-treated with fluoranthene] results in increased expression of EEA1 mRNA CTD PMID:28329830 Eea1 Rat FR900359 affects phosphorylation ISO RGD:1320911 6480464 FR900359 affects the phosphorylation of EEA1 protein CTD PMID:37730182 Eea1 Rat furfural multiple interactions ISO RGD:1320911 6480464 [pyrogallol 1,3-dimethyl ether co-treated with Furaldehyde] results in decreased expression of and affects the localization more ... CTD PMID:38598786 Eea1 Rat geldanamycin increases expression ISO RGD:1320911 6480464 geldanamycin results in increased expression of EEA1 mRNA CTD PMID:26705709 Eea1 Rat gentamycin increases expression EXP 6480464 Gentamicins results in increased expression of EEA1 mRNA CTD PMID:33387578 Eea1 Rat gold atom decreases expression ISO RGD:1320911 6480464 Gold results in decreased expression of EEA1 mRNA CTD PMID:25523186 Eea1 Rat gold(0) decreases expression ISO RGD:1320911 6480464 Gold results in decreased expression of EEA1 mRNA CTD PMID:25523186 Eea1 Rat ivermectin decreases expression ISO RGD:1320911 6480464 Ivermectin results in decreased expression of EEA1 protein CTD PMID:32959892 Eea1 Rat lead diacetate decreases methylation EXP 6480464 lead acetate results in decreased methylation of EEA1 gene CTD PMID:29571894 Eea1 Rat lead(II) chloride multiple interactions ISO RGD:1320911 6480464 [cadmium sulfate co-treated with cobaltous chloride co-treated with lead chloride] results in increased expression of more ... CTD PMID:18654764 Eea1 Rat mercury atom increases expression ISO RGD:1320911 6480464 Mercury results in increased expression of EEA1 mRNA CTD PMID:16823088 Eea1 Rat mercury(0) increases expression ISO RGD:1320911 6480464 Mercury results in increased expression of EEA1 mRNA CTD PMID:16823088 Eea1 Rat methidathion decreases expression ISO RGD:1320912 6480464 methidathion results in decreased expression of EEA1 mRNA CTD PMID:34813904 Eea1 Rat methyl methanesulfonate increases expression ISO RGD:1320911 6480464 Methyl Methanesulfonate results in increased expression of EEA1 mRNA CTD PMID:23649840 Eea1 Rat miconazole decreases expression ISO RGD:1320912 6480464 Miconazole results in decreased expression of EEA1 mRNA CTD PMID:27462272 Eea1 Rat nickel atom decreases expression ISO RGD:1320911 6480464 Nickel results in decreased expression of EEA1 mRNA CTD PMID:23195993 Eea1 Rat ozone multiple interactions ISO RGD:1320912 6480464 [Air Pollutants results in increased abundance of Ozone] which results in increased expression of EEA1 more ... CTD PMID:27106289 Eea1 Rat paracetamol affects expression ISO RGD:1320912 6480464 Acetaminophen affects the expression of EEA1 mRNA CTD PMID:17562736 Eea1 Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of EEA1 mRNA CTD PMID:33387578 Eea1 Rat paracetamol decreases expression ISO RGD:1320911 6480464 Acetaminophen results in decreased expression of EEA1 mRNA CTD PMID:21420995 Eea1 Rat paracetamol multiple interactions ISO RGD:1320912 6480464 MAP3K5 protein affects the reaction [Acetaminophen results in increased expression of EEA1 mRNA] CTD PMID:18700144 Eea1 Rat paraquat increases expression EXP 6480464 Paraquat results in increased expression of EEA1 mRNA CTD PMID:32680482 Eea1 Rat perfluorooctane-1-sulfonic acid decreases expression ISO RGD:1320911 6480464 perfluorooctane sulfonic acid results in decreased expression of EEA1 mRNA CTD PMID:27153767 Eea1 Rat perfluorooctane-1-sulfonic acid multiple interactions ISO RGD:1320912 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of EEA1 mRNA CTD PMID:36331819 Eea1 Rat phenobarbital increases expression ISO RGD:1320912 6480464 Phenobarbital results in increased expression of EEA1 mRNA CTD PMID:19270015 Eea1 Rat phorbol 13-acetate 12-myristate multiple interactions ISO RGD:1320911 6480464 Tetradecanoylphorbol Acetate results in increased localization of [SLC6A3 protein co-treated with EEA1 protein] CTD PMID:22683840 Eea1 Rat poly(I:C) multiple interactions EXP 6480464 [Poly I-C co-treated with HU 211] results in decreased expression of EEA1 mRNA CTD PMID:26923065 Eea1 Rat potassium chromate multiple interactions ISO RGD:1320911 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of EEA1 mRNA CTD PMID:22079256 Eea1 Rat potassium chromate decreases expression ISO RGD:1320911 6480464 potassium chromate(VI) results in decreased expression of EEA1 mRNA CTD PMID:22079256 Eea1 Rat potassium dichromate increases expression ISO RGD:1320912 6480464 Potassium Dichromate results in increased expression of EEA1 mRNA CTD PMID:23608068 Eea1 Rat resveratrol multiple interactions ISO RGD:1320911 6480464 [Plant Extracts co-treated with Resveratrol] results in increased expression of EEA1 mRNA CTD PMID:23557933 Eea1 Rat SB 431542 multiple interactions ISO RGD:1320911 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ... CTD PMID:27188386 Eea1 Rat sodium arsenate increases expression ISO RGD:1320912 6480464 sodium arsenate results in increased expression of EEA1 mRNA CTD PMID:21795629 Eea1 Rat sodium arsenite decreases expression EXP 6480464 sodium arsenite results in decreased expression of EEA1 protein CTD PMID:29459688 Eea1 Rat sodium chloride multiple interactions ISO RGD:1320911 6480464 [Sodium Chloride co-treated with Furaldehyde] results in decreased expression of and affects the localization of more ... CTD PMID:38598786 Eea1 Rat sunitinib increases expression ISO RGD:1320911 6480464 Sunitinib results in increased expression of EEA1 mRNA CTD PMID:31533062 Eea1 Rat testosterone decreases expression ISO RGD:1320911 6480464 Testosterone results in decreased expression of EEA1 mRNA CTD PMID:33359661 Eea1 Rat tetrachloromethane increases expression ISO RGD:1320912 6480464 Carbon Tetrachloride results in increased expression of EEA1 mRNA CTD PMID:31919559 Eea1 Rat thifluzamide increases expression ISO RGD:1320911 6480464 thifluzamide results in increased expression of EEA1 mRNA CTD PMID:33512557 Eea1 Rat thimerosal decreases expression ISO RGD:1320911 6480464 Thimerosal results in decreased expression of EEA1 mRNA CTD PMID:27188386 Eea1 Rat titanium dioxide increases expression ISO RGD:1320912 6480464 titanium dioxide results in increased expression of EEA1 mRNA CTD PMID:29264374 Eea1 Rat trichloroethene decreases methylation EXP 6480464 Trichloroethylene results in decreased methylation of EEA1 gene CTD PMID:27618143 Eea1 Rat trichostatin A increases expression ISO RGD:1320911 6480464 trichostatin A results in increased expression of EEA1 mRNA CTD PMID:24935251 Eea1 Rat trimellitic anhydride increases expression ISO RGD:1320912 6480464 trimellitic anhydride results in increased expression of EEA1 mRNA CTD PMID:19042947 Eea1 Rat triphenyl phosphate affects expression ISO RGD:1320911 6480464 triphenyl phosphate affects the expression of EEA1 mRNA CTD PMID:37042841 Eea1 Rat triptonide increases expression ISO RGD:1320912 6480464 triptonide results in increased expression of EEA1 mRNA CTD PMID:33045310 Eea1 Rat valproic acid increases expression ISO RGD:1320911 6480464 Valproic Acid results in increased expression of EEA1 mRNA CTD PMID:26272509|PMID:28001369|PMID:37505509 Eea1 Rat valproic acid affects splicing EXP 6480464 Valproic Acid affects the splicing of EEA1 mRNA CTD PMID:29427782 Eea1 Rat valproic acid multiple interactions ISO RGD:1320911 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ... CTD PMID:27188386 Eea1 Rat vorinostat decreases expression ISO RGD:1320911 6480464 vorinostat results in decreased expression of EEA1 mRNA CTD PMID:27188386
Cellular Component
Only show annotations with direct experimental evidence (0 objects hidden)
Eea1 Rat axonal spine located_in ISO RGD:1320912 1624291 PMID:23303939 RGD PMID:23303939 Eea1 Rat axonal spine located_in IEA UniProtKB:Q8BL66|ensembl:ENSMUSP00000061493 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat cytoplasmic vesicle located_in ISO RGD:1320912 1624291 PMID:23553667 RGD PMID:23553667 Eea1 Rat cytoplasmic vesicle located_in IEA UniProtKB:Q8BL66|ensembl:ENSMUSP00000061493 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat cytosol located_in ISO RGD:1320911 1624291 PMID:7768953 RGD PMID:7768953 Eea1 Rat cytosol located_in IEA UniProtKB:Q15075|ensembl:ENSP00000317955 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat early endosome located_in ISO RGD:1320912 1624291 PMID:12746448, PMID:14668490, PMID:15078902, PMID:15588329, PMID:15975910, PMID:16204232, PMID:16399794, PMID:17003038, PMID:17620357, PMID:17716972, PMID:17765678, PMID:18838382, PMID:20943658, more ... RGD PMID:12746448|PMID:14668490|PMID:15078902|PMID:15588329|PMID:15975910|PMID:16204232|PMID:16399794|PMID:17003038|PMID:17620357|PMID:17716972|PMID:17765678|PMID:18838382|PMID:20943658|PMID:21502359|PMID:23918928|PMID:23926254|PMID:24029230|PMID:24334765|PMID:24760869|PMID:26965651 Eea1 Rat early endosome located_in IEA UniProtKB:Q15075|ensembl:ENSP00000317955 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat early endosome is_active_in IBA FB:FBgn0034585|MGI:2442192|PANTHER:PTN000570604|UniProtKB:Q15075|WB:WBGene00011696 1600115 GO_REF:0000033 GO_Central GO_REF:0000033 Eea1 Rat early endosome located_in IEA UniProtKB:Q8BL66|ensembl:ENSMUSP00000061493 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat early endosome part_of ISO RGD:1320911 1624291 PMID:16543144 RGD PMID:16543144 Eea1 Rat early endosome located_in ISO RGD:1320911 1624291 PMID:11741531, PMID:12536145, PMID:15229288, PMID:15792797, PMID:15880641, PMID:16542649, PMID:18388320, PMID:18767904, PMID:19535332, PMID:22719997, PMID:22792322, PMID:25327288 RGD PMID:11741531|PMID:12536145|PMID:15229288|PMID:15792797|PMID:15880641|PMID:16542649|PMID:18388320|PMID:18767904|PMID:19535332|PMID:22719997|PMID:22792322|PMID:25327288 Eea1 Rat early endosome membrane located_in ISO RGD:1320911 1624291 PMID:7768953 RGD PMID:7768953 Eea1 Rat early endosome membrane located_in IEA UniProtKB:Q15075|ensembl:ENSP00000317955 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat endosome located_in ISO RGD:1320912 1624291 PMID:12890772, PMID:14718562, PMID:16923123, PMID:24239381, PMID:26582200 RGD PMID:12890772|PMID:14718562|PMID:16923123|PMID:24239381|PMID:26582200 Eea1 Rat endosome located_in IEA UniProtKB:Q8BL66|ensembl:ENSMUSP00000061493 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat glutamatergic synapse is_active_in ISO RGD:1320912 1624291 PMID:17113235 RGD PMID:17113235 Eea1 Rat glutamatergic synapse is_active_in IEA UniProtKB:Q8BL66|ensembl:ENSMUSP00000061493 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat postsynaptic early endosome is_active_in ISO RGD:1320912 1624291 PMID:17113235, PMID:34564930 RGD PMID:17113235|PMID:34564930 Eea1 Rat postsynaptic early endosome is_active_in IEA UniProtKB:Q8BL66|ensembl:ENSMUSP00000061493 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat presynaptic endosome is_active_in IDA 41408338 PMID:31074746 SynGO Eea1 Rat presynaptic endosome is_active_in IMP 41408338 PMID:31074746 SynGO Eea1 Rat recycling endosome IDA 4892345 RGD Eea1 Rat Schaffer collateral - CA1 synapse is_active_in ISO RGD:1320912 1624291 PMID:17113235 RGD PMID:17113235 Eea1 Rat Schaffer collateral - CA1 synapse is_active_in IEA UniProtKB:Q8BL66|ensembl:ENSMUSP00000061493 1600115 GO_REF:0000107 Ensembl GO_REF:0000107
Molecular Function
Only show annotations with direct experimental evidence (0 objects hidden)
Eea1 Rat 1-phosphatidylinositol binding enables ISO RGD:1320911 1624291 PMID:11256955 RGD PMID:11256955 Eea1 Rat 1-phosphatidylinositol binding enables IEA UniProtKB:Q15075|ensembl:ENSP00000317955 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat 1-phosphatidylinositol binding enables IBA PANTHER:PTN000570604|UniProtKB:Q15075 1600115 GO_REF:0000033 GO_Central GO_REF:0000033 Eea1 Rat GTP-dependent protein binding enables ISO RGD:1320911 1624291 PMID:10491193 RGD PMID:10491193 Eea1 Rat GTP-dependent protein binding enables IEA UniProtKB:Q15075|ensembl:ENSP00000317955 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat metal ion binding enables IEA InterPro:IPR000306 1600115 GO_REF:0000002 InterPro GO_REF:0000002 Eea1 Rat metal ion binding enables IEA UniProtKB-KW:KW-0479 1600115 GO_REF:0000043 UniProt GO_REF:0000043 Eea1 Rat protein binding IPI RGD:1304859 13504749 RGD Eea1 Rat protein binding enables ISO RGD:1320912 1624291 PR:P35278|PR:Q9CQD1 PMID:20534488 RGD PMID:20534488 Eea1 Rat protein binding enables ISO RGD:1320911 1624291 UniProtKB:P04626|UniProtKB:P20339|UniProtKB:P51148|UniProtKB:P61020|UniProtKB:Q5K651|UniProtKB:Q63635|UniProtKB:Q69Z37|UniProtKB:Q7Z3T8|UniProtKB:Q8IVG5|UniProtKB:Q9UL26 PMID:10491193, PMID:10506127, PMID:11870209, PMID:14613930, PMID:16314522, PMID:16902405, PMID:24029230, PMID:25114243, PMID:25266290, PMID:29568061, PMID:9697774 RGD PMID:10491193|PMID:10506127|PMID:11870209|PMID:14613930|PMID:16314522|PMID:16902405|PMID:24029230|PMID:25114243|PMID:25266290|PMID:29568061|PMID:9697774 Eea1 Rat protein homodimerization activity enables ISO RGD:1320911 1624291 PMID:11741531 RGD PMID:11741531 Eea1 Rat protein homodimerization activity enables IEA UniProtKB:Q15075|ensembl:ENSP00000317955 1600115 GO_REF:0000107 Ensembl GO_REF:0000107 Eea1 Rat zinc ion binding enables IEA UniProtKB-KW:KW-0863 1600115 GO_REF:0000043 UniProt GO_REF:0000043
Imported Annotations - KEGG (archival)
(-)-epigallocatechin 3-gallate (ISO) (1->4)-beta-D-glucan (ISO) 1,2-dimethylhydrazine (ISO) 2,2',4,4'-Tetrabromodiphenyl ether (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP) 2,3,7,8-Tetrachlorodibenzofuran (EXP) 2,4,6-tribromophenol (ISO) 2,6-dimethoxyphenol (ISO) 2,6-dinitrotoluene (EXP) 2-bromohexadecanoic acid (ISO) 3,3',5,5'-tetrabromobisphenol A (ISO) 3,4-methylenedioxymethamphetamine (ISO) acrylamide (EXP) aflatoxin B1 (ISO) aristolochic acid A (ISO) arsane (ISO) arsenic atom (ISO) arsenite(3-) (ISO) benzo[a]pyrene diol epoxide I (ISO) bis(2-ethylhexyl) phthalate (ISO) bisphenol A (EXP,ISO) bisphenol AF (ISO) Bisphenol B (ISO) bisphenol F (ISO) bromobenzene (EXP) cadmium atom (ISO) cadmium dichloride (ISO) cadmium sulfate (ISO) caffeine (ISO) chloroquine (ISO) cisplatin (ISO) clobetasol (ISO) cobalt dichloride (ISO) crocidolite asbestos (ISO) deguelin (ISO) Dibutyl phosphate (ISO) dibutyl phthalate (ISO) dorsomorphin (ISO) doxorubicin (ISO) ethanol (EXP) ethyl methanesulfonate (ISO) fluoranthene (ISO) FR900359 (ISO) furfural (ISO) geldanamycin (ISO) gentamycin (EXP) gold atom (ISO) gold(0) (ISO) ivermectin (ISO) lead diacetate (EXP) lead(II) chloride (ISO) mercury atom (ISO) mercury(0) (ISO) methidathion (ISO) methyl methanesulfonate (ISO) miconazole (ISO) nickel atom (ISO) ozone (ISO) paracetamol (EXP,ISO) paraquat (EXP) perfluorooctane-1-sulfonic acid (ISO) phenobarbital (ISO) phorbol 13-acetate 12-myristate (ISO) poly(I:C) (EXP) potassium chromate (ISO) potassium dichromate (ISO) resveratrol (ISO) SB 431542 (ISO) sodium arsenate (ISO) sodium arsenite (EXP) sodium chloride (ISO) sunitinib (ISO) testosterone (ISO) tetrachloromethane (ISO) thifluzamide (ISO) thimerosal (ISO) titanium dioxide (ISO) trichloroethene (EXP) trichostatin A (ISO) trimellitic anhydride (ISO) triphenyl phosphate (ISO) triptonide (ISO) valproic acid (EXP,ISO) vorinostat (ISO)
Cellular Component
axonal spine (IEA,ISO) cytoplasmic vesicle (IEA,ISO) cytosol (IEA,ISO) early endosome (IBA,IEA,ISO) early endosome membrane (IEA,ISO) endosome (IEA,ISO) glutamatergic synapse (IEA,ISO) postsynaptic early endosome (IEA,ISO) presynaptic endosome (IDA,IMP) recycling endosome (IDA) Schaffer collateral - CA1 synapse (IEA,ISO)
1.
Critical role for Piccolo in synaptic vesicle retrieval.
Ackermann F, etal., Elife. 2019 May 10;8. pii: 46629. doi: 10.7554/eLife.46629.
2.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.
Rat ISS GO annotations from GOA human gene data--August 2006
GOA data from the GO Consortium
4.
GRIP1 and 2 regulate activity-dependent AMPA receptor recycling via exocyst complex interactions.
Mao L, etal., Proc Natl Acad Sci U S A. 2010 Nov 2;107(44):19038-43. doi: 10.1073/pnas.1013494107. Epub 2010 Oct 18.
5.
Rat ISS GO annotations from MGI mouse gene data--August 2006
MGD data from the GO Consortium
6.
KEGG Annotation Import Pipeline
Pipeline to import KEGG annotations from KEGG into RGD
7.
GOA pipeline
RGD automated data pipeline
8.
ClinVar Automated Import and Annotation Pipeline
RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.
Data Import for Chemical-Gene Interactions
RGD automated import pipeline for gene-chemical interactions
10.
A tubular endosomal fraction from rat liver: biochemical evidence of receptor sorting by default.
Verges M, etal., Proc Natl Acad Sci U S A. 1999 Aug 31;96(18):10146-51.
11.
Endophilin B1 as a novel regulator of nerve growth factor/ TrkA trafficking and neurite outgrowth.
Wan J, etal., J Neurosci. 2008 Sep 3;28(36):9002-12. doi: 10.1523/JNEUROSCI.0767-08.2008.
Eea1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 32,441,281 - 32,608,808 (+) NCBI GRCr8 mRatBN7.2 7 30,554,686 - 30,722,186 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 30,554,552 - 30,718,487 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 7 37,101,415 - 37,186,534 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 37,018,459 - 37,186,732 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 37,144,373 - 37,233,282 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 33,294,184 - 33,396,666 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 7 33,311,103 - 33,413,833 (+) NCBI Celera 7 27,696,956 - 27,782,232 (+) NCBI Celera Cytogenetic Map 7 q13 NCBI
EEA1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 12 92,770,637 - 92,929,295 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 12 92,770,637 - 92,929,331 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 12 93,164,413 - 93,323,071 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 12 91,690,416 - 91,847,238 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 12 91,671,790 - 91,825,475 NCBI Celera 12 92,837,376 - 92,994,185 (-) NCBI Celera Cytogenetic Map 12 q22 NCBI HuRef 12 90,233,695 - 90,352,959 (-) NCBI HuRef CHM1_1 12 93,130,989 - 93,288,076 (-) NCBI CHM1_1 T2T-CHM13v2.0 12 92,748,215 - 92,957,284 (-) NCBI T2T-CHM13v2.0
Eea1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 10 95,776,525 - 95,881,380 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 10 95,776,512 - 95,881,380 (+) Ensembl GRCm39 Ensembl GRCm38 10 95,940,663 - 96,045,518 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 10 95,940,650 - 96,045,518 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 10 95,403,297 - 95,508,152 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 10 95,370,351 - 95,474,820 (+) NCBI MGSCv36 mm8 Celera 10 97,916,805 - 98,021,533 (+) NCBI Celera Cytogenetic Map 10 C2 NCBI cM Map 10 49.59 NCBI
Eea1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955405 29,760,332 - 29,868,755 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955405 29,760,332 - 29,959,553 (-) NCBI ChiLan1.0 ChiLan1.0
EEA1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 10 100,799,346 - 100,957,036 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 12 100,795,736 - 100,953,409 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 12 90,299,582 - 90,457,109 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 12 93,611,628 - 93,767,583 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 12 93,611,628 - 93,767,583 (-) Ensembl panpan1.1 panPan2
EEA1 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 15 33,145,250 - 33,234,899 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 15 33,148,637 - 33,256,669 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 15 33,597,838 - 33,709,848 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 15 33,814,867 - 33,927,149 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 15 33,816,143 - 33,927,195 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 15 33,094,790 - 33,206,783 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 15 33,183,253 - 33,295,258 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 15 33,447,116 - 33,559,225 (-) NCBI UU_Cfam_GSD_1.0
Eea1 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404945 26,769,728 - 26,903,979 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936507 9,331,455 - 9,424,835 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936507 9,331,572 - 9,465,708 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
EEA1 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 5 90,168,242 - 90,257,241 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 5 90,131,707 - 90,257,014 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 5 94,369,958 - 94,492,342 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
EEA1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 11 88,164,064 - 88,318,305 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 11 88,167,550 - 88,318,218 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666037 156,846,305 - 157,001,660 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Eea1
.
Predicted Target Of
Count of predictions: 316 Count of miRNA genes: 195 Interacting mature miRNAs: 242 Transcripts: ENSRNOT00000029764 Prediction methods: Miranda, Targetscan Result types: miRGate_prediction
1354644 Spl4 Serum phospholipid level QTL 4 4.9 blood phospholipid amount (VT:0006084) blood phospholipid level (CMO:0001169) 7 19654317 49753746 Rat 7411569 Bw137 Body weight QTL 137 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 7 21921195 66921195 Rat 9590102 Sffal5 Serum free fatty acids level QTL 5 8.62 0.001 blood free fatty acid amount (VT:0001553) plasma free fatty acids level (CMO:0000546) 7 5329019 50329019 Rat 1578652 Bmd15 Bone mineral density QTL 15 5.2 femur mineral mass (VT:0010011) trabecular volumetric bone mineral density (CMO:0001729) 7 9866467 60460686 Rat 1641885 Alcrsp9 Alcohol response QTL 9 alcohol metabolism trait (VT:0015089) blood ethanol level (CMO:0000535) 7 24099606 69099606 Rat 631503 Bp102 Blood pressure QTL 102 1.9 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 7 1 44822433 Rat 1549840 Bss5 Bone structure and strength QTL 5 9.8 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 7 24751841 69751841 Rat 10755438 Coatc9 Coat color QTL 9 0 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 7 3529280 48529280 Rat 1300127 Srn1 Serum renin concentration QTL 1 3.87 blood renin amount (VT:0003349) plasma renin activity level (CMO:0000116) 7 29409683 84928080 Rat 2298547 Neuinf5 Neuroinflammation QTL 5 3.7 nervous system integrity trait (VT:0010566) spinal cord Cd74 protein level (CMO:0002131) 7 9462246 58265113 Rat 10059592 Kidm45 Kidney mass QTL 45 3.95 0.025 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 7 7573985 52573985 Rat 2317047 Wbc4 White blood cell count QTL 4 0.01 leukocyte quantity (VT:0000217) white blood cell count (CMO:0000027) 7 1 35342956 Rat 10755440 Coatc10 Coat color QTL 10 0 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 7 7496499 52496499 Rat 1354637 Scl30 Serum cholesterol level QTL 30 3.7 blood cholesterol amount (VT:0000180) blood total cholesterol level (CMO:0000051) 7 19654317 49753746 Rat 724560 Plsm3 Polydactyly-luxate syndrome (PLS) morphotypes QTL 3 0.0003 tibia length (VT:0004357) tibia length (CMO:0000450) 7 1 34000259 Rat 1354639 Spl5 Serum phospholipid level QTL 5 3.9 blood LDL phospholipid amount (VT:0010505) blood low density lipoprotein phospholipid level (CMO:0001568) 7 19654317 52888450 Rat 7411566 Bw136 Body weight QTL 136 10.4 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 7 1 31962314 Rat 10755451 Coatc11 Coat color QTL 11 0 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 7 17944357 62944357 Rat 2317059 Aia15 Adjuvant induced arthritis QTL 15 2.46 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 7 17004598 62004598 Rat 61410 Bw19 Body weight QTL 19 6.2 0.001 body mass (VT:0001259) body weight (CMO:0000012) 7 1 44782185 Rat 1643004 Pain2 Pain QTL 2 1 mechanical nociception trait (VT:0002734) self mutilation severity score (CMO:0002145) 7 9462246 98011544 Rat 634336 Anxrr17 Anxiety related response QTL 17 3.66 locomotor behavior trait (VT:0001392) number of entries into a discrete space in an experimental apparatus (CMO:0000960) 7 924703 115097879 Rat 9590142 Scort5 Serum corticosterone level QTL 5 24.4 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 7 1 31962314 Rat 1582260 Bw72 Body weight QTL 72 3.2 0.0043 body mass (VT:0001259) body weight (CMO:0000012) 7 15795565 38073970 Rat 1582261 Bw69 Body weight QTL 69 3.2 0.0048 body mass (VT:0001259) body weight (CMO:0000012) 7 15795565 38073970 Rat 1582262 Bw75 Body weight QTL 75 3 0.0038 body mass (VT:0001259) body weight (CMO:0000012) 7 15795565 38073970 Rat 70190 Mcs6 Mammary carcinoma susceptibility QTL 6 2.29 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 7 26737401 63902784 Rat 1300132 Bp182 Blood pressure QTL 182 3.49 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 7 19654317 84928080 Rat 61369 Mcs2 Mammary carcinoma susceptibility QTL 2 3.38 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 7 19032807 35526300 Rat 1300138 Hrtrt9 Heart rate QTL 9 4.72 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 7 29409683 53612950 Rat 10402855 Bp379 Blood pressure QTL 379 0.21 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 29409683 74409683 Rat 738033 Anxrr6 Anxiety related response QTL 6 4.1 exploratory behavior trait (VT:0010471) percentage of entries into a discrete space in an experimental apparatus (CMO:0000961) 7 15573889 60573889 Rat
RH130077
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 7 30,721,729 - 30,721,914 (+) MAPPER mRatBN7.2 Rnor_6.0 7 37,189,851 - 37,190,035 NCBI Rnor6.0 Rnor_5.0 7 37,233,180 - 37,233,364 UniSTS Rnor5.0 RGSC_v3.4 7 33,396,564 - 33,396,748 UniSTS RGSC3.4 Celera 7 27,785,549 - 27,785,733 UniSTS RH 3.4 Map 7 241.5 UniSTS Cytogenetic Map 7 q13 UniSTS
RH130537
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 7 30,637,818 - 30,638,031 (+) MAPPER mRatBN7.2 Rnor_6.0 7 37,106,496 - 37,106,708 NCBI Rnor6.0 Rnor_5.0 7 37,149,907 - 37,150,119 UniSTS Rnor5.0 RGSC_v3.4 7 33,308,383 - 33,308,595 UniSTS RGSC3.4 Celera 7 27,702,030 - 27,702,242 UniSTS RH 3.4 Map 7 241.0 UniSTS Cytogenetic Map 7 q13 UniSTS
BF389134
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 7 30,689,763 - 30,689,886 (+) MAPPER mRatBN7.2 Rnor_6.0 7 37,158,417 - 37,158,539 NCBI Rnor6.0 Rnor_5.0 7 37,201,405 - 37,201,527 UniSTS Rnor5.0 RGSC_v3.4 7 33,363,397 - 33,363,519 UniSTS RGSC3.4 Celera 7 27,754,447 - 27,754,569 UniSTS RH 3.4 Map 7 241.5 UniSTS Cytogenetic Map 7 q13 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000029764 ⟹ ENSRNOP00000029575
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 30,632,334 - 30,718,487 (+) Ensembl Rnor_6.0 Ensembl 7 37,101,391 - 37,186,534 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000087297 ⟹ ENSRNOP00000071305
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 30,554,552 - 30,718,487 (+) Ensembl Rnor_6.0 Ensembl 7 37,018,459 - 37,186,732 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000095444 ⟹ ENSRNOP00000092690
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 30,604,739 - 30,718,487 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000103157 ⟹ ENSRNOP00000087995
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 30,604,739 - 30,718,487 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000107821 ⟹ ENSRNOP00000094814
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 30,604,770 - 30,718,487 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000117665 ⟹ ENSRNOP00000083105
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 30,604,739 - 30,718,487 (+) Ensembl
RefSeq Acc Id:
NM_001427400 ⟹ NP_001414329
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 32,491,558 - 32,608,476 (+) NCBI
RefSeq Acc Id:
XM_039080104 ⟹ XP_038936032
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 32,491,542 - 32,608,808 (+) NCBI mRatBN7.2 7 30,604,663 - 30,722,186 (+) NCBI
RefSeq Acc Id:
XM_039080106 ⟹ XP_038936034
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 32,441,490 - 32,608,808 (+) NCBI mRatBN7.2 7 30,554,686 - 30,722,186 (+) NCBI
RefSeq Acc Id:
XM_039080107 ⟹ XP_038936035
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 32,441,281 - 32,608,808 (+) NCBI mRatBN7.2 7 30,554,686 - 30,722,186 (+) NCBI
RefSeq Acc Id:
XM_063263460 ⟹ XP_063119530
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 32,491,542 - 32,608,808 (+) NCBI
RefSeq Acc Id:
XM_063263461 ⟹ XP_063119531
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 32,484,866 - 32,608,808 (+) NCBI
RefSeq Acc Id:
XM_063263462 ⟹ XP_063119532
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 32,519,538 - 32,608,808 (+) NCBI
RefSeq Acc Id:
XM_063263463 ⟹ XP_063119533
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 32,574,274 - 32,608,808 (+) NCBI
Ensembl Acc Id:
ENSRNOP00000071305 ⟸ ENSRNOT00000087297
Ensembl Acc Id:
ENSRNOP00000029575 ⟸ ENSRNOT00000029764
RefSeq Acc Id:
XP_038936034 ⟸ XM_039080106
- Peptide Label:
isoform X4
- UniProtKB:
F1LUA1 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_038936035 ⟸ XM_039080107
- Peptide Label:
isoform X5
- UniProtKB:
A0A0G2K051 (UniProtKB/TrEMBL), F1LUA1 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_038936032 ⟸ XM_039080104
- Peptide Label:
isoform X1
- UniProtKB:
F1LUA1 (UniProtKB/TrEMBL), A0A8I6AIN6 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSRNOP00000083105 ⟸ ENSRNOT00000117665
Ensembl Acc Id:
ENSRNOP00000087995 ⟸ ENSRNOT00000103157
Ensembl Acc Id:
ENSRNOP00000094814 ⟸ ENSRNOT00000107821
Ensembl Acc Id:
ENSRNOP00000092690 ⟸ ENSRNOT00000095444
RefSeq Acc Id:
XP_063119531 ⟸ XM_063263461
- Peptide Label:
isoform X3
- UniProtKB:
F1LUA1 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063119530 ⟸ XM_063263460
- Peptide Label:
isoform X2
- UniProtKB:
F1LUA1 (UniProtKB/TrEMBL), A0A8I6A8E0 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001414329 ⟸ NM_001427400
- UniProtKB:
F1LUA1 (UniProtKB/TrEMBL), A0A8I5ZV67 (UniProtKB/TrEMBL), A6IG51 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063119532 ⟸ XM_063263462
- Peptide Label:
isoform X6
- UniProtKB:
F1LUA1 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063119533 ⟸ XM_063263463
- Peptide Label:
isoform X7
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-04-30
Eea1
early endosome antigen 1
Eea1_predicted
early endosome antigen 1 (predicted)
'predicted' is removed
2292626 APPROVED
2005-01-12
Eea1_predicted
early endosome antigen 1 (predicted)
Symbol and Name status set to approved
70820 APPROVED
