Symbol:
Zmym1
Name:
zinc finger MYM-type containing 1
RGD ID:
1307027
Description:
Predicted to enable protein dimerization activity. Orthologous to human ZMYM1 (zinc finger MYM-type containing 1); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; gentamycin.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC313604; zinc finger MYM-type protein 1; zinc finger, MYM domain containing 1; zinc finger, MYM-type 1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 144,649,238 - 144,666,334 (-) NCBI GRCr8 mRatBN7.2 5 139,364,788 - 139,381,883 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 139,364,789 - 139,381,873 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 142,060,921 - 142,078,000 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 143,830,897 - 143,847,976 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 143,831,700 - 143,848,772 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 145,106,518 - 145,123,869 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 145,105,997 - 145,123,861 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 148,876,920 - 148,894,262 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 146,487,291 - 146,504,387 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 146,497,388 - 146,514,498 (-) NCBI Celera 5 137,859,438 - 137,876,532 (-) NCBI Celera Cytogenetic Map 5 q36 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Zmym1 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 144,649,238 - 144,666,334 (-) NCBI GRCr8 mRatBN7.2 5 139,364,788 - 139,381,883 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 139,364,789 - 139,381,873 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 142,060,921 - 142,078,000 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 143,830,897 - 143,847,976 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 143,831,700 - 143,848,772 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 145,106,518 - 145,123,869 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 145,105,997 - 145,123,861 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 148,876,920 - 148,894,262 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 146,487,291 - 146,504,387 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 146,497,388 - 146,514,498 (-) NCBI Celera 5 137,859,438 - 137,876,532 (-) NCBI Celera Cytogenetic Map 5 q36 NCBI
ZMYM1 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 35,059,786 - 35,118,818 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 35,032,172 - 35,118,818 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 35,525,387 - 35,581,460 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 35,317,559 - 35,354,042 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 35,214,084 - 35,250,547 NCBI Celera 1 33,818,420 - 33,854,843 (+) NCBI Celera Cytogenetic Map 1 p34.3 NCBI HuRef 1 33,662,356 - 33,698,885 (+) NCBI HuRef CHM1_1 1 35,660,702 - 35,697,194 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 34,922,450 - 34,978,527 (+) NCBI T2T-CHM13v2.0
Zmym1 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 126,940,887 - 126,954,968 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 126,940,887 - 126,954,945 (-) Ensembl GRCm39 Ensembl GRCm38 4 127,047,094 - 127,061,176 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 127,047,094 - 127,061,152 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 126,724,338 - 126,738,376 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 126,549,398 - 126,563,436 (-) NCBI MGSCv36 mm8 Celera 4 125,381,256 - 125,395,289 (-) NCBI Celera Cytogenetic Map 4 D2.2 NCBI cM Map 4 61.22 NCBI
Zmym1 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955452 13,196,007 - 13,230,202 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955452 13,196,280 - 13,228,283 (+) NCBI ChiLan1.0 ChiLan1.0
ZMYM1 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 191,727,191 - 191,766,862 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 190,848,371 - 190,888,053 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 34,345,439 - 34,383,605 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 35,527,411 - 35,563,423 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 35,536,527 - 35,563,423 (+) Ensembl panpan1.1 panPan2
ZMYM1 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 15 6,918,292 - 6,946,293 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 15 6,918,589 - 6,937,638 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 15 7,148,336 - 7,186,115 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 15 7,055,849 - 7,091,889 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 15 7,064,660 - 7,091,828 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 15 6,928,300 - 6,955,734 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 15 6,975,348 - 7,002,617 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 15 6,980,725 - 7,016,512 (-) NCBI UU_Cfam_GSD_1.0
Zmym1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405058 51,862,717 - 51,886,601 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936474 17,687,458 - 17,713,047 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936474 17,687,529 - 17,712,953 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
ZMYM1 (Sus scrofa - pig)
ZMYM1 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 97,756,181 - 97,795,408 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 97,756,784 - 97,795,146 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666033 18,929,387 - 18,964,694 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Zmym1 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 25 Count of miRNA genes: 20 Interacting mature miRNAs: 25 Transcripts: ENSRNOT00000064015 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1331796 Thshl2 Thyroid stimulating hormone level QTL 2 2.3 blood thyroid-stimulating hormone amount (VT:0005119) serum thyroid stimulating hormone level (CMO:0001248) 5 97059760 147465714 Rat 10053720 Scort26 Serum corticosterone level QTL 26 2.06 0.0147 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 5 124965598 166875058 Rat 1549845 Scl44 Serum cholesterol level QTL 44 6 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 5 40128307 148607290 Rat 8552960 Pigfal15 Plasma insulin-like growth factor 1 level QTL 15 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 5 111416838 156416838 Rat 631562 Apr2 Acute phase response QTL 2 3.7 blood murinoglobulin 1 amount (VT:0010597) plasma murinoglobulin 1 level (CMO:0001931) 5 135927956 166875058 Rat 61444 Strs2 Sensitivity to stroke QTL 2 4.7 cerebrum integrity trait (VT:0010549) post-insult time to onset of cerebrovascular lesion (CMO:0002343) 5 135929696 166875058 Rat 1300122 Wbc1 White blood cell count QTL 1 2.75 leukocyte quantity (VT:0000217) total white blood cell count (CMO:0000365) 5 125392826 139989768 Rat 61452 Ciaa5 CIA Autoantibody QTL 5 3.5 blood autoantibody amount (VT:0003725) calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281) 5 94858972 143070159 Rat 70156 Niddm30 Non-insulin dependent diabetes mellitus QTL 30 3.98 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 5 129132447 151006154 Rat 8552908 Pigfal4 Plasma insulin-like growth factor 1 level QTL 4 6.6 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 5 128506074 166875058 Rat 1331803 Rf32 Renal function QTL 32 2.798 kidney blood vessel physiology trait (VT:0100012) absolute change in renal vascular resistance (CMO:0001900) 5 129132428 143070159 Rat 61393 Bp7 Blood pressure QTL 7 4.5 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 60293434 161481680 Rat 7794791 Mcs33 Mammary carcinoma susceptibility QTL 33 1.93 mammary gland integrity trait (VT:0010552) mammary tumor incidence/prevalence measurement (CMO:0000946) 5 131345754 166875058 Rat 7207486 Bss109 Bone structure and strength QTL 109 femur strength trait (VT:0010010) femur total energy absorbed before break (CMO:0001677) 5 106906205 151906205 Rat 7207481 Bss106 Bone structure and strength QTL 106 7.9 femur strength trait (VT:0010010) femur ultimate force (CMO:0001675) 5 106906205 151906205 Rat 1302790 Scl20 Serum cholesterol level QTL 20 6.4 0.0001 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 5 82394392 166664054 Rat 1598861 Cm64 Cardiac mass QTL 64 2.9 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 5 127798274 166875058 Rat 1578766 Tcas11 Tongue tumor susceptibility QTL 11 4.12 tongue integrity trait (VT:0010553) number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) 5 46711509 161317411 Rat 631505 Bp103 Blood pressure QTL 103 3.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 132717196 165560427 Rat 1549838 Bss4 Bone structure and strength QTL 4 9.2 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 5 106906205 151906205 Rat 1641920 Colcs1 Colorectal carcinoma susceptibility QTL 1 2.99 0.0055 intestine integrity trait (VT:0010554) benign colorectal tumor surface area measurement (CMO:0001799) 5 121846814 166846814 Rat 8694169 Bw148 Body weight QTL 148 5 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 5 128506074 166875058 Rat 8657050 Bw146 Body weight QTL 146 19.84 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 5 108938288 153938288 Rat 1581510 Cm54 Cardiac mass QTL 54 3.4 0.05 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 5 120740824 143608494 Rat 1576312 Emca8 Estrogen-induced mammary cancer QTL 8 4.1 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 5 50328551 141643988 Rat 1641912 Alcrsp18 Alcohol response QTL 18 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 5 35189153 141643988 Rat 1576314 Eutr1 Estrogen induced uterine response QTL 1 uterus integrity trait (VT:0010575) pyometritis severity score (CMO:0002009) 5 2138965 166875058 Rat 2317056 Wbc3 White blood cell count QTL 3 2.51 0.01 leukocyte quantity (VT:0000217) white blood cell count (CMO:0000027) 5 105999803 150999803 Rat 634349 Bp139 Blood pressure QTL 139 0.001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 128924607 166875058 Rat 724525 Bp147 Blood pressure QTL 147 4.3 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 126424772 166875058 Rat 1598847 Cm62 Cardiac mass QTL 62 3.4 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 5 108845856 153845856 Rat 2293642 Bss37 Bone structure and strength QTL 37 4.64 0.0001 femur strength trait (VT:0010010) femur ultimate force (CMO:0001675) 5 120740824 151018848 Rat 1578673 Bmd13 Bone mineral density QTL 13 4.9 femur mineral mass (VT:0010011) trabecular volumetric bone mineral density (CMO:0001729) 5 103689353 148689353 Rat 738018 Anxrr4 Anxiety related response QTL 4 5.1 exploratory behavior trait (VT:0010471) percentage of entries into a discrete space in an experimental apparatus (CMO:0000961) 5 130130159 166875058 Rat 7207488 Bss110 Bone structure and strength QTL 1 8.4 femur strength trait (VT:0010010) femur stiffness (CMO:0001674) 5 106906205 151906205 Rat 8694441 Bw169 Body weight QTL 169 17.61 0.001 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight to body weight ratio (CMO:0000635) 5 111416838 156416838 Rat 7207491 Bss112 Bone structure and strength QTL 112 7 femur morphology trait (VT:0000559) femur midshaft cortical cross-sectional area (CMO:0001663) 5 106906205 151906205 Rat 8694389 Bw160 Body weight QTL 160 6.17 0.001 body lean mass (VT:0010483) lean tissue morphological measurement (CMO:0002184) 5 111416838 156416838 Rat 61426 Scl2 Serum cholesterol level QTL 2 7.3 0.001 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 5 59793399 143070159 Rat 1354598 Srn6 Serum renin concentration QTL 6 3.8 blood renin amount (VT:0003349) plasma renin activity level (CMO:0000116) 5 69540295 151018848 Rat 8694198 Abfw3 Abdominal fat weight QTL 3 16.13 0.001 visceral adipose mass (VT:0010063) abdominal fat pad weight to body weight ratio (CMO:0000095) 5 111416838 156416838 Rat 1298089 Scl14 Serum cholesterol level QTL 14 5.8 0.0004 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 5 108845856 153845856 Rat 1598819 Bp292 Blood pressure QTL 292 4.3 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 127798274 166875058 Rat 1358187 Emca1 Estrogen-induced mammary cancer QTL 1 4.4 mammary gland integrity trait (VT:0010552) post-insult time to mammary tumor formation (CMO:0000345) 5 99216724 148607142 Rat
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000064015 ⟹ ENSRNOP00000062035
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 5 139,364,848 - 139,381,873 (-) Ensembl Rnor_6.0 Ensembl 5 145,105,997 - 145,123,861 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000117758 ⟹ ENSRNOP00000085939
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 5 139,364,789 - 139,377,861 (-) Ensembl
RefSeq Acc Id:
NM_001107983 ⟹ NP_001101453
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 144,649,239 - 144,666,334 (-) NCBI mRatBN7.2 5 139,364,789 - 139,381,883 (-) NCBI Rnor_6.0 5 145,106,519 - 145,123,860 (-) NCBI Rnor_5.0 5 148,876,920 - 148,894,262 (-) NCBI RGSC_v3.4 5 146,487,291 - 146,504,387 (-) RGD Celera 5 137,859,438 - 137,876,532 (-) RGD
Sequence:
GAGCCGGCGTGGTTGTTTGCACTGCGAAACCCGAGTGGGCGCTTCCCGCCGCTGGGTTGGTGATAGATTATCCGTCCTCGTGGAGTCGCTCAGGGCCGCTTTTCCAGAGAGAGGTGGCGTTTTTCCGG TCCTGAGGAGGGTGACGCGACAGTTTCAACACACCACATGTATGCGAGAGCTGGAGGAGGCCGGAAGCTGGGGTTGCATCTCTTGATGCTGGAGCTACAGATGCTGGGAACTGAACCCAGGTCCTCTG TAAGAGTAACAAAGTGCCCTTAACCAGTGAGCCACCCTTCTAGTCCTAAATCTCCACAGCCGACATCTCTGTTCTCACCTGACGTGAGTAAAATGCTTCCTGCAGTTCCAGGCACAGCTGCTCAGCTT TCCTGTTCCAGTTGTAGAAGAGTCTTTCAGGAGGGACAGACAGCTTTTCAGAGGAAAGGGTCTGCTGAGCTTTTCTGCTCGAGACTCTGCATCGATGGGTGCCCTTTACCTGCTATGTCCCCAGCTCC TCTCAAAAGAATGTGCTTAAACTGCTCAAGAGACATTTTAAATCTAAAGGATATGAAGAGCGTCCGATTGGAGGATAGCAGTTGTAACAAAAACTTTTGTAGCCAGTCTTGTCTTACATCATATGAAG AAAAACGAAAGCCATGTGTTACCGTATATACTGAGAGCACTTTGCCTAAGTGCAGCATGTGTCAGAGGACATCCACTAAACCACCCAGAATACTTAGATCTTTTCCTTGCAAATCACTGAAACTATCA GATGAGATGATTGTGATTACTAATGACTTGGGGAACCTAGAGATTTTCTGCTCTGTTTGTTTTTCTTCATACAACAGTGCTGTGATGGAATCTTCTTCAGTTAATGTTTCCATGGTGCACAGTGCTTC AAAAGAGAATGTCTGTCCTAAGAAATACCCAGTCATAAGCAGTATAATGTCATTAGTAAACAATCGTGCTGACCTGGTCGTGAATACTGATCTCTTACAAGGTACACTTTCTTCTGTACCTACAAATG TCATTGTGAACAGCTCAGCCAGTGAGTCCAGCAGTGGTGTTGGAAATAGTGTGGACCAGCCAAGCCTCCCCCCGCCTTCCTCTGTGCTCGGTGAGGACAAAGCTGCTCCCAGTGAGGAGGTCCAAAAC AACAGTGAGACAAACCAGGATCCTACATATAGCATGACATCCGTGAAAGGAAATGATCAGCCATGTTTCTCAAAGTCTACATCCACAGAACAGAAGATTAAGAGTGAGCCACAGCCTGCTGGAGAGCT GTGGAGCCCAGGTTCCCAGCATCTGCGTCCCAGTACTGCCAATGAGATCGCTTTCTGCTATTCTTGCTACTTGTTCTACCAGAAAAAAGTCAGCTGTCGGAGAGAAGCTTTTGCAACCAAAGGAGCTG CTGCTGACTGGGAGAGAATGCTGGAAAATTTCAGACGGCATGAAGAAAGCGAAGGGCACTTAAAGTCCCTGCGATTTTGGAGGCAATGCCAGTTTCTCGATGCCGTTCCACATAACGATTCATCTGTT TATTCAAAACAGATTGAAGGAAATAAAAAGTACCTACAGCTCGTCATTGAGAACATTTTATTTCTTGGAAAACAGTGCTTGCTCTTAAAAGGAAATGACCAGTCTATTTCGTCCATTAATAAAGGCAA TTTTTTGGAATTACTAGAGATTAGAGCAAGAGATAAAGGAGAGGTGTCTCGGCTTATGAGTTCACACATTGACTTCTATAGTAGTACTCTTGTCCAGGAGGAGATTATTGAAATAATAAAGGGTGAAA TGTTGCAAGACATCGTGAGTGAGATCAACGCCTCCTCAGCCTTTTCAATAATCTGTGAGGAGGTAGCTGGCAGTGGTGCTGAGAGACAGCTTTCTGTGTGTGTGAGGTATGCACAAAAATTGCCAAGT GCTGTCTTCGTTAAAGAGCGGTTCCTGGGGTTCGTTACTGCTGAGGAGGTGACTGGGGCCCATGTACACAGGCGTATCAAAGCTTACCTGCAGCAGGTCGGAGTTGACTTTAATAAAATATGCGGCCA AGCCTATGATAGTGCCACAAATTTTAGGGTAAAACTGAATGAGGTTGTAACAGAATTCAAGAAGGAAGAGCCAAGAGTTCTGTATGTGCATTGTCATGCACATTTTTTTGAGTTAGCCGTGCTTAGCT TTTGTAAGGAGGTGAAGGAGCTCCGCAGTGCGCTAAACACGCTCGGCTCTTTGTTCAACACTGTCCGTGTGTCTGGAGAAATGTTGGCAAGTTTGCAGACCGTGTGTAAGCTAAGTCTGAATAAGACT TGTAAAAAGCACGCATCGCAGTCCTGTTGGCCAGCCCACGACCACTTGTTACTGGCTGTGACAGACTGCCTTCCAGAGATCGTGGGAATGCTGGAGTCCGTGTCGCGCCACTCCTCAGGCACAGGCGT GGCTGCGGAGCTGGAAGATTTGTTGGCGATGGTTACCAAGTTTGAGTTTATATTTTGTTTGAAATTTCTTTATCGAATACTCAGTATTACAGGGATTCTTTCTAGAGAGTTTCAAAGTGAAACTGTAG ACATTTTTTCTTTGTTTTCAAAAATAGAAGCGATTTTGGAGTGTTTATCTTCTGAAAGGAATGATACATATTTTAAAACTATCTGGGATGGAGCAGATGAAATAAGTAAAAAGATAACCAGCAAGGGT TTTGATATTGAGAAACCCTCTTTTCAAAAAAGAAGAAAAATTCAAAGAACAGTAGATCCCTGCAACTCAGAGCATATGATTTTTCCTACTTCAGCAGATGAACAATATAAAATTAATATTTACTACCA AGGTTTGGATACTGTATTAAAAAGCTTAAAGTTATATTTTTCAGAGTTTGACTATTGCAAAATGAAACAAATTTCCGAGCTGTTACTCAAGTGGAATGAACCATTAAATGAAGCCACAGCCAAGCACA TCCAGGAATTCTATAAACTTGATGCAGACATCATCCCTGAGCTAAGATTTTACCGGCAGTATGCAAGTCTCAACTTCGTCACACGGAATGGTTCCTTAAGCTTCATTGACCTGGGCTGTCTGTTTATT CAGCACGGTCTCCACAATAATATTCCTTGTATCACAAAACTGTTGCATATTGCTTTATCTTGGCCAATTACTTCAGCAAATAATGAGAAGTCATTTTCCACACTGCCTCATCTTAAAGCATACTTACT TCGTACCACGGGGCAAGAGAAGCTCAGTAGCCTTGCTCTGATAGCTGTTGAGCAGGAACTGGTAAATAAATTGATGGAACCTGAAAGACTCACGGGAATGGTTGAAAAGTTCATTAGTCAAATGAAAG ATAAATAAGACAAACTTGCAACTTTGAGCTCAATTAAAAAGAATTCTGTGGTTTTATTAGAATCCTA
hide sequence
RefSeq Acc Id:
NM_001419581 ⟹ NP_001406510
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 144,649,238 - 144,666,323 (-) NCBI mRatBN7.2 5 139,364,788 - 139,381,872 (-) NCBI
RefSeq Acc Id:
NM_001419582 ⟹ NP_001406511
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 144,649,238 - 144,666,323 (-) NCBI mRatBN7.2 5 139,364,788 - 139,381,872 (-) NCBI
RefSeq Acc Id:
XM_063287763 ⟹ XP_063143833
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 144,649,238 - 144,665,444 (-) NCBI
RefSeq Acc Id:
XM_063287764 ⟹ XP_063143834
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 144,649,238 - 144,666,238 (-) NCBI
RefSeq Acc Id:
NP_001101453 ⟸ NM_001107983
- Peptide Label:
isoform 1
- UniProtKB:
G3V9X1 (UniProtKB/TrEMBL), A6ISC3 (UniProtKB/TrEMBL)
- Sequence:
MLPAVPGTAAQLSCSSCRRVFQEGQTAFQRKGSAELFCSRLCIDGCPLPAMSPAPLKRMCLNCSRDILNLKDMKSVRLEDSSCNKNFCSQSCLTSYEEKRKPCVTVYTESTLPKCSMCQRTSTKPPRI LRSFPCKSLKLSDEMIVITNDLGNLEIFCSVCFSSYNSAVMESSSVNVSMVHSASKENVCPKKYPVISSIMSLVNNRADLVVNTDLLQGTLSSVPTNVIVNSSASESSSGVGNSVDQPSLPPPSSVLG EDKAAPSEEVQNNSETNQDPTYSMTSVKGNDQPCFSKSTSTEQKIKSEPQPAGELWSPGSQHLRPSTANEIAFCYSCYLFYQKKVSCRREAFATKGAAADWERMLENFRRHEESEGHLKSLRFWRQCQ FLDAVPHNDSSVYSKQIEGNKKYLQLVIENILFLGKQCLLLKGNDQSISSINKGNFLELLEIRARDKGEVSRLMSSHIDFYSSTLVQEEIIEIIKGEMLQDIVSEINASSAFSIICEEVAGSGAERQL SVCVRYAQKLPSAVFVKERFLGFVTAEEVTGAHVHRRIKAYLQQVGVDFNKICGQAYDSATNFRVKLNEVVTEFKKEEPRVLYVHCHAHFFELAVLSFCKEVKELRSALNTLGSLFNTVRVSGEMLAS LQTVCKLSLNKTCKKHASQSCWPAHDHLLLAVTDCLPEIVGMLESVSRHSSGTGVAAELEDLLAMVTKFEFIFCLKFLYRILSITGILSREFQSETVDIFSLFSKIEAILECLSSERNDTYFKTIWDG ADEISKKITSKGFDIEKPSFQKRRKIQRTVDPCNSEHMIFPTSADEQYKINIYYQGLDTVLKSLKLYFSEFDYCKMKQISELLLKWNEPLNEATAKHIQEFYKLDADIIPELRFYRQYASLNFVTRNG SLSFIDLGCLFIQHGLHNNIPCITKLLHIALSWPITSANNEKSFSTLPHLKAYLLRTTGQEKLSSLALIAVEQELVNKLMEPERLTGMVEKFISQMKDK
hide sequence
Ensembl Acc Id:
ENSRNOP00000062035 ⟸ ENSRNOT00000064015
Ensembl Acc Id:
ENSRNOP00000085939 ⟸ ENSRNOT00000117758
RefSeq Acc Id:
NP_001406511 ⟸ NM_001419582
- Peptide Label:
isoform 3
- UniProtKB:
G3V9X1 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001406510 ⟸ NM_001419581
- Peptide Label:
isoform 1
- UniProtKB:
A6ISC3 (UniProtKB/TrEMBL), G3V9X1 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063143834 ⟸ XM_063287764
- Peptide Label:
isoform X2
- UniProtKB:
G3V9X1 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063143833 ⟸ XM_063287763
- Peptide Label:
isoform X1
- UniProtKB:
A0A8I6A535 (UniProtKB/TrEMBL), G3V9X1 (UniProtKB/TrEMBL)
RGD ID: 13694045
Promoter ID: EPDNEW_R4570
Type: multiple initiation site
Name: Zmym1_1
Description: zinc finger MYM-type containing 1
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 5 145,123,849 - 145,123,909 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-02-19
Zmym1
zinc finger MYM-type containing 1
Zmym1
zinc finger, MYM-type 1
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2008-09-25
Zmym1
zinc finger, MYM-type 1
Zmym1
zinc finger, MYM domain containing 1
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2008-04-30
Zmym1
zinc finger, MYM domain containing 1
Zmym1_predicted
zinc finger, MYM domain containing 1 (predicted)
'predicted' is removed
2292626
APPROVED
2005-01-12
Zmym1_predicted
zinc finger, MYM domain containing 1 (predicted)
Symbol and Name status set to approved
70820
APPROVED