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Gene: Nipa2 (NIPA magnesium transporter 2) Rattus norvegicus

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Symbol:

Nipa2

Name:

NIPA magnesium transporter 2

RGD ID:

1306051

Description:

Predicted to enable magnesium ion transmembrane transporter activity. Predicted to be involved in magnesium ion transport. Predicted to be located in early endosome and plasma membrane. Predicted to be active in membrane. Orthologous to human NIPA2 (NIPA magnesium transporter 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC308667; magnesium transporter NIPA2; non imprinted in Prader-Willi/Angelman syndrome 2; non imprinted in Prader-Willi/Angelman syndrome 2 homolog; non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human); RGD1306051; similar to hypothetical protein MGC5466; SLC56A2; solute carrier family 56 member 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NIPA2 (NIPA magnesium transporter 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Nipa2 (non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nipa2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NIPA2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NIPA2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nipa2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NIPA2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NIPA2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nipa2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PRSS27 (serine protease 27)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	NIPA2 (NIPA magnesium transporter 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Nipa2 (non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	nipa2 (NIPA magnesium transporter 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nipa-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	spict	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	nipa2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	115,935,759 - 115,960,034 (-)	NCBI		GRCr8
mRatBN7.2	1	106,799,979 - 106,824,206 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	106,800,903 - 106,824,126 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	112,189,907 - 112,213,732 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	120,661,776 - 120,685,605 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	113,910,729 - 113,934,562 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	114,346,005 - 114,371,907 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	114,348,038 - 114,371,897 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	107,335,238 - 107,359,088 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	107,414,466 - 107,437,394 (-)	NCBI
Celera	1	101,010,676 - 101,034,526 (-)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Nipa2	Rat	Angelman syndrome		ISO	NIPA2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Angelman syndrome	ClinVar
Nipa2	Rat	autism spectrum disorder		ISO	NIPA2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism spectrum disorder	ClinVar	PMID:21187176 more ...
Nipa2	Rat	autistic disorder		ISO	NIPA2 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:21681106 more ...
Nipa2	Rat	chromosome 15q11.2 deletion syndrome		ISO	NIPA2 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 more ...
Nipa2	Rat	hereditary spastic paraplegia 6		ISO	NIPA2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hereditary spastic paraplegia 6	ClinVar	PMID:17268193 more ...
Nipa2	Rat	intellectual disability		ISO	NIPA2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability	ClinVar
Nipa2	Rat	Neurodevelopmental Disorders		ISO	NIPA2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar
Nipa2	Rat	schizophrenia		ISO	NIPA2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Schizophrenia	ClinVar	PMID:21681106 and PMID:30208311

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Nipa2	Rat	1,2-dimethylhydrazine	decreases expression	ISO	Nipa2 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in decreased expression of NIPA2 mRNA	CTD	PMID:22206623
Nipa2	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of NIPA2 mRNA	CTD	PMID:33387578
Nipa2	Rat	3,4-methylenedioxymethamphetamine	decreases expression	ISO	Nipa2 (Mus musculus)	6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of NIPA2 mRNA	CTD	PMID:26251327
Nipa2	Rat	4,4'-sulfonyldiphenol	increases expression	ISO	Nipa2 (Mus musculus)	6480464	bisphenol S results in increased expression of NIPA2 mRNA	CTD	PMID:39298647
Nipa2	Rat	6-propyl-2-thiouracil	increases expression	EXP		6480464	Propylthiouracil results in increased expression of NIPA2 mRNA	CTD	PMID:30047161
Nipa2	Rat	acrolein	multiple interactions	ISO	NIPA2 (Homo sapiens)	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of NIPA2 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased oxidation of NIPA2 mRNA	CTD	PMID:32699268
Nipa2	Rat	acrylamide	increases expression	ISO	NIPA2 (Homo sapiens)	6480464	Acrylamide results in increased expression of NIPA2 mRNA	CTD	PMID:32763439
Nipa2	Rat	aflatoxin B1	increases methylation	ISO	NIPA2 (Homo sapiens)	6480464	Aflatoxin B1 results in increased methylation of NIPA2 gene	CTD	PMID:27153756
Nipa2	Rat	alpha-pinene	multiple interactions	ISO	NIPA2 (Homo sapiens)	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of NIPA2 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased oxidation of NIPA2 mRNA	CTD	PMID:32699268
Nipa2	Rat	amitrole	decreases expression	EXP		6480464	Amitrole results in decreased expression of NIPA2 mRNA	CTD	PMID:38685447
Nipa2	Rat	amitrole	increases expression	EXP		6480464	Amitrole results in increased expression of NIPA2 mRNA	CTD	PMID:30047161
Nipa2	Rat	amphetamine	increases expression	EXP		6480464	Amphetamine results in increased expression of NIPA2 mRNA	CTD	PMID:30779732
Nipa2	Rat	antirheumatic drug	decreases expression	ISO	NIPA2 (Homo sapiens)	6480464	Antirheumatic Agents results in decreased expression of NIPA2 mRNA	CTD	PMID:24449571
Nipa2	Rat	atrazine	decreases expression	ISO	NIPA2 (Homo sapiens)	6480464	Atrazine results in decreased expression of NIPA2 mRNA	CTD	PMID:22378314
Nipa2	Rat	benzo[a]pyrene	increases methylation	ISO	NIPA2 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased methylation of NIPA2 promoter	CTD	PMID:27901495
Nipa2	Rat	beta-lapachone	decreases expression	ISO	NIPA2 (Homo sapiens)	6480464	beta-lapachone results in decreased expression of NIPA2 mRNA	CTD	PMID:38218311
Nipa2	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of NIPA2 mRNA	CTD	PMID:25181051 more ...
Nipa2	Rat	bisphenol A	affects splicing	ISO	Nipa2 (Mus musculus)	6480464	bisphenol A affects the splicing of NIPA2 mRNA	CTD	PMID:37894381
Nipa2	Rat	bisphenol A	increases expression	ISO	Nipa2 (Mus musculus)	6480464	bisphenol A results in increased expression of NIPA2 mRNA	CTD	PMID:33221593
Nipa2	Rat	bisphenol F	multiple interactions	ISO	NIPA2 (Homo sapiens)	6480464	[bisphenol F co-treated with Fulvestrant] results in increased methylation of NIPA2 gene	CTD	PMID:31601247
Nipa2	Rat	carbon nanotube	increases expression	ISO	Nipa2 (Mus musculus)	6480464	Nanotubes and Carbon results in increased expression of NIPA2 mRNA	CTD	PMID:25554681
Nipa2	Rat	crocidolite asbestos	decreases expression	ISO	Nipa2 (Mus musculus)	6480464	Asbestos and Crocidolite results in decreased expression of NIPA2 mRNA	CTD	PMID:29279043
Nipa2	Rat	diazinon	increases methylation	ISO	NIPA2 (Homo sapiens)	6480464	Diazinon results in increased methylation of NIPA2 gene	CTD	PMID:22964155
Nipa2	Rat	Dibutyl phosphate	affects expression	ISO	NIPA2 (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of NIPA2 mRNA	CTD	PMID:37042841
Nipa2	Rat	dibutyl phthalate	increases expression	EXP		6480464	Dibutyl Phthalate results in increased expression of NIPA2 mRNA	CTD	PMID:21266533
Nipa2	Rat	fulvestrant	multiple interactions	ISO	NIPA2 (Homo sapiens)	6480464	[bisphenol F co-treated with Fulvestrant] results in increased methylation of NIPA2 gene	CTD	PMID:31601247
Nipa2	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of NIPA2 mRNA	CTD	PMID:22061828
Nipa2	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of NIPA2 mRNA	CTD	PMID:33387578
Nipa2	Rat	methimazole	increases expression	EXP		6480464	Methimazole results in increased expression of NIPA2 mRNA	CTD	PMID:30047161
Nipa2	Rat	ozone	multiple interactions	ISO	NIPA2 (Homo sapiens)	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of NIPA2 mRNA more ...	CTD	PMID:32699268
Nipa2	Rat	paracetamol	affects expression	ISO	Nipa2 (Mus musculus)	6480464	Acetaminophen affects the expression of NIPA2 mRNA	CTD	PMID:17562736
Nipa2	Rat	pirinixic acid	increases expression	ISO	Nipa2 (Mus musculus)	6480464	pirinixic acid results in increased expression of NIPA2 mRNA	CTD	PMID:23811191
Nipa2	Rat	resveratrol	multiple interactions	ISO	NIPA2 (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in increased expression of NIPA2 mRNA	CTD	PMID:23557933
Nipa2	Rat	sulfadimethoxine	increases expression	EXP		6480464	Sulfadimethoxine results in increased expression of NIPA2 mRNA	CTD	PMID:30047161
Nipa2	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of NIPA2 mRNA	CTD	PMID:34492290
Nipa2	Rat	titanium dioxide	increases methylation	ISO	Nipa2 (Mus musculus)	6480464	titanium dioxide results in increased methylation of NIPA2 gene	CTD	PMID:35295148
Nipa2	Rat	titanium dioxide	decreases methylation	ISO	Nipa2 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of NIPA2 gene and titanium dioxide results in decreased methylation of NIPA2 promoter alternative form	CTD	PMID:35295148
Nipa2	Rat	triptonide	affects expression	ISO	Nipa2 (Mus musculus)	6480464	triptonide affects the expression of NIPA2 mRNA	CTD	PMID:33045310
Nipa2	Rat	valproic acid	affects expression	ISO	Nipa2 (Mus musculus)	6480464	Valproic Acid affects the expression of NIPA2 mRNA	CTD	PMID:17963808
Nipa2	Rat	valproic acid	increases expression	ISO	NIPA2 (Homo sapiens)	6480464	Valproic Acid results in increased expression of NIPA2 mRNA	CTD	PMID:23179753 and PMID:28001369
Nipa2	Rat	valproic acid	affects expression	ISO	NIPA2 (Homo sapiens)	6480464	Valproic Acid affects the expression of NIPA2 mRNA	CTD	PMID:25979313

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Nipa2	Rat	magnesium ion transmembrane transport	involved_in	IEA	GO:0015095	1600115	GO_REF:0000108	GOC	GO_REF:0000108
Nipa2	Rat	magnesium ion transport	involved_in	ISO	Nipa2 (Mus musculus)	1624291	PMID:18667602	RGD	PMID:18667602
Nipa2	Rat	magnesium ion transport	involved_in	IEA	InterPro:IPR008521	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Nipa2	Rat	magnesium ion transport	involved_in	IEA	UniProtKB:Q8N8Q9 and ensembl:ENSP00000337618	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Nipa2	Rat	magnesium ion transport	involved_in	IEA	UniProtKB:Q9JJC8 and ensembl:ENSMUSP00000114020	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Nipa2	Rat	magnesium ion transport	involved_in	IEA	ARBA:ARBA00027817	1600115	GO_REF:0000117	UniProt	GO_REF:0000117
Nipa2	Rat	magnesium ion transport	involved_in	IBA	MGI:1913918 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Nipa2	Rat	magnesium ion transport	involved_in	ISO	NIPA2 (Homo sapiens)	1624291	PMID:25347071	RGD	PMID:25347071

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Nipa2	Rat	early endosome	located_in	ISO	Nipa2 (Mus musculus)	1624291	PMID:18667602	RGD	PMID:18667602
Nipa2	Rat	early endosome	located_in	IEA	UniProtKB:Q9JJC8 and ensembl:ENSMUSP00000114020	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Nipa2	Rat	membrane	is_active_in	IBA	MGI:1913918 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Nipa2	Rat	membrane	located_in	IEA	InterPro:IPR008521	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Nipa2	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Nipa2	Rat	membrane	located_in	IEA	UniProtKB-SubCell:SL-0162	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Nipa2	Rat	plasma membrane	located_in	ISO	Nipa2 (Mus musculus)	1624291	PMID:18667602	RGD	PMID:18667602
Nipa2	Rat	plasma membrane	located_in	IEA	UniProtKB:Q9JJC8 and ensembl:ENSMUSP00000114020	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Nipa2	Rat	plasma membrane	located_in	IEA	UniProtKB:Q8N8Q9 and ensembl:ENSP00000337618	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Nipa2	Rat	plasma membrane	located_in	ISO	NIPA2 (Homo sapiens)	1624291	PMID:25347071	RGD	PMID:25347071

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Nipa2	Rat	magnesium ion transmembrane transporter activity	enables	IEA	InterPro:IPR008521	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Nipa2	Rat	protein binding	enables	ISO	Nipa2 (Mus musculus)	1624291	PR:Q9D882 PMID:11591653	RGD	PMID:11591653

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:18667602

Nipa2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	115,935,759 - 115,960,034 (-)	NCBI		GRCr8
mRatBN7.2	1	106,799,979 - 106,824,206 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	106,800,903 - 106,824,126 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	112,189,907 - 112,213,732 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	120,661,776 - 120,685,605 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	113,910,729 - 113,934,562 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	114,346,005 - 114,371,907 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	114,348,038 - 114,371,897 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	107,335,238 - 107,359,088 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	107,414,466 - 107,437,394 (-)	NCBI
Celera	1	101,010,676 - 101,034,526 (-)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

NIPA2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	22,838,666 - 22,868,384 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	22,838,644 - 22,869,362 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	23,004,684 - 23,034,402 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	20,556,788 - 20,585,849 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	20,556,789 - 20,585,849	NCBI
Celera	15	1,345,448 - 1,375,128 (+)	NCBI		Celera
Cytogenetic Map	15	q11.2	NCBI
HuRef	15	1,317,064 - 1,346,346 (-)	NCBI		HuRef
CHM1_1	15	22,953,969 - 22,983,718 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	20,510,413 - 20,540,236 (+)	NCBI		T2T-CHM13v2.0

Nipa2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	55,581,014 - 55,612,241 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	55,581,035 - 55,612,224 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	55,931,266 - 55,962,493 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	55,931,287 - 55,962,476 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	63,186,957 - 63,217,820 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	55,799,606 - 55,830,469 (-)	NCBI		MGSCv36	mm8
Celera	7	53,285,203 - 53,308,910 (-)	NCBI		Celera
Cytogenetic Map	7	B5	NCBI
cM Map	7	33.42	NCBI

Nipa2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955533	1,204,429 - 1,223,519 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955533	1,204,429 - 1,223,512 (-)	NCBI	ChiLan1.0	ChiLan1.0

NIPA2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	12,173,593 - 12,202,697 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	15,900,460 - 15,928,907 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	15	20,574,757 - 20,603,765 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	20,574,757 - 20,603,745 (-)	Ensembl	panpan1.1		panPan2

NIPA2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	32,051,313 - 32,095,379 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	32,062,708 - 32,094,491 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	34,587,552 - 34,620,417 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	32,241,212 - 32,274,095 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	32,239,317 - 32,274,094 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	31,774,940 - 31,807,664 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	32,024,153 - 32,057,027 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	32,134,896 - 32,167,787 (-)	NCBI		UU_Cfam_GSD_1.0

Nipa2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	120,484,308 - 120,524,949 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936471	38,332,371 - 38,359,239 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NIPA2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	32,175,104 - 32,202,200 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	32,175,096 - 32,202,366 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

NIPA2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	53,675,253 - 53,715,695 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	53,676,125 - 53,697,733 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	36,406,108 - 36,442,463 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nipa2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624896	2,695,373 - 2,724,316 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624896	2,695,468 - 2,724,316 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Nipa2
132 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	751
Count of miRNA genes:	293
Interacting mature miRNAs:	372
Transcripts:	ENSRNOT00000018028
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	5925874	115540829	Rat
1582234	Gluco18	Glucose level QTL 18	3.4	0.0003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	78479925	123479925	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	30882023	123479925	Rat
1578780	Cm52	Cardiac mass QTL 52	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	1	81591954	219808434	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	49393172	159356837	Rat
1300121	Hrtrt1	Heart rate QTL 1	3.7		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	65789093	115540829	Rat
9590300	Scort16	Serum corticosterone level QTL 16	4.39	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	103111621	148111621	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	57336763	151090257	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	90532338	123479925	Rat
631569	Bp93	Blood pressure QTL 93		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	106047847	121834139	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	48963584	144267916	Rat
61344	Bp29	Blood pressure QTL 29	7.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	78350581	123350581	Rat
724521	Uae1	Urinary albumin excretion QTL 1	3.8	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	90508614	173018436	Rat
1358902	Bw47	Body weight QTL 47	1.67		body mass (VT:0001259)	body weight (CMO:0000012)	1	90508614	180359386	Rat
61346	Rf2	Renal disease susceptibility QTL 2	3.7		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	1	99267916	144267916	Rat
2313094	Bss58	Bone structure and strength QTL 58	3.7	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	43284731	118944897	Rat
8655649	Arrd1	Age-related retinal degeneration QTL 1	4.89		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	100357752	183970443	Rat
2313099	Bss56	Bone structure and strength QTL 56	2.4	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	1	43284731	118944897	Rat
2313098	Bmd70	Bone mineral density QTL 70	3.6	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	43284731	118944897	Rat
1300153	Bp171	Blood pressure QTL 171	3.37		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	90664883	143200202	Rat
2317833	Alcrsp19	Alcohol response QTL 19	12.4	0.001	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	1	100979852	145979852	Rat
731168	Bp154	Blood pressure QTL 154	3.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	94642644	214537671	Rat
1641897	Alcrsp1	Alcohol response QTL 1			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	1	100979852	145979852	Rat
1331749	Hrtrt11	Heart rate QTL 11	2.973		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	94494440	198211706	Rat
1331751	Bp199	Blood pressure QTL 199	3.60022		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	94494440	181830018	Rat
2293142	Bp314	Blood pressure QTL 314			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	92184926	137184926	Rat
724529	Cm16	Cardiac mass QTL 16	2.7		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	1	87580395	150700247	Rat
61370	Mcs3	Mammary carcinoma susceptibility QTL 3	2.15		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	102268556	147268556	Rat
2313059	Bss55	Bone structure and strength QTL 55	3.2	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	1	43284731	118944897	Rat
70209	Niddm23	Non-insulin dependent diabetes mellitus QTL 23	2.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	94494440	198324465	Rat
631496	Bp97	Blood pressure QTL 97	3.08		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	106047847	151047847	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	49393289	199050459	Rat
2303591	Gluco41	Glucose level QTL 41	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	102168504	147168504	Rat
1331793	Bp200	Blood pressure QTL 200	3.71601		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	94494440	172949803	Rat
1354591	Cm36	Cardiac mass QTL 36	4.1		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	102813953	201278233	Rat
1331800	Scl25	Serum cholesterol level QTL 25	3.013		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	94494440	117601394	Rat
7421628	Bp361	Blood pressure QTL 361		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	66023617	118608521	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	32356093	162846471	Rat
2313072	Bss53	Bone structure and strength QTL 53	4.3	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	43284731	118944897	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	32737458	199368955	Rat
2313078	Bss54	Bone structure and strength QTL 54	3.5	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	1	43284731	118944897	Rat
61399	Tcat1	Tongue tumor resistance QTL 1	3.3		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 5 mm (CMO:0001879)	1	99267916	144267916	Rat
2313083	Bmd74	Bone mineral density QTL 74	4	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	82174743	118944897	Rat
4889494	Scort2	Serum corticosterone level QTL 2	4.2		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	80592172	125592172	Rat
724567	Tcas6	Tongue tumor susceptibility QTL 6	6.85		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	1	92948896	144267916	Rat
1354615	Cm32	Cardiac mass QTL 32	5.2		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	1	102813953	201278233	Rat
1358192	Ept13	Estrogen-induced pituitary tumorigenesis QTL 13	3.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	77494165	122494165	Rat
8694370	Bw154	Body weight QTL 154	8.91	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	1	103111621	148111621	Rat
1354623	Rf46	Renal function QTL 46	3.8		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	1	102813953	151162766	Rat
738022	Anxrr13	Anxiety related response QTL 13	4.6	0.00039	locomotor behavior trait (VT:0001392)	number of 20 x 20 cm floor squares crossed into, out of or within a discrete space in an experimental apparatus (CMO:0001514)	1	83547917	128547917	Rat
10054135	Gmadr2	Adrenal mass QTL 2	1.97	0.0129	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	77857876	122857876	Rat
7411712	Strs4	Sensitivity to stroke QTL 4	8.7		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	1	78430536	123430536	Rat
2313051	Bss57	Bone structure and strength QTL 57	3.7	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	43284731	118944897	Rat
1354606	Bp246	Blood pressure QTL 246	3.6		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	102813953	218753816	Rat

RH128015

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	106,800,255 - 106,800,468 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	114,348,001 - 114,348,213	NCBI	Rnor6.0
Rnor_5.0	1	115,354,378 - 115,354,590	UniSTS	Rnor5.0
RGSC_v3.4	1	107,335,201 - 107,335,413	UniSTS	RGSC3.4
Celera	1	101,010,639 - 101,010,851	UniSTS
RH 3.4 Map	1	939.8	UniSTS
Cytogenetic Map	1	q22	UniSTS

RH141851

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	106,800,961 - 106,801,148 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	114,348,707 - 114,348,893	NCBI	Rnor6.0
Rnor_5.0	1	115,355,084 - 115,355,270	UniSTS	Rnor5.0
RGSC_v3.4	1	107,335,907 - 107,336,093	UniSTS	RGSC3.4
Celera	1	101,011,345 - 101,011,531	UniSTS
RH 3.4 Map	1	940.39	UniSTS
Cytogenetic Map	1	q22	UniSTS

AI598964

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	106,800,573 - 106,800,725 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	114,348,319 - 114,348,470	NCBI	Rnor6.0
Rnor_5.0	1	115,354,696 - 115,354,847	UniSTS	Rnor5.0
RGSC_v3.4	1	107,335,519 - 107,335,670	UniSTS	RGSC3.4
Celera	1	101,010,957 - 101,011,108	UniSTS
RH 3.4 Map	1	939.5	UniSTS
Cytogenetic Map	1	q22	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001107518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229297	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000018028 ⟹ ENSRNOP00000018028

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	106,800,903 - 106,824,126 (-)	Ensembl
Rnor_6.0 Ensembl	1	114,348,038 - 114,371,897 (-)	Ensembl

RefSeq Acc Id:

NM_001107518 ⟹ NP_001100988

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,936,063 - 115,959,913 (-)	NCBI
mRatBN7.2	1	106,800,293 - 106,824,144 (-)	NCBI
Rnor_6.0	1	114,348,038 - 114,371,897 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI
RGSC_v3.4	1	107,335,238 - 107,359,088 (-)	RGD
Celera	1	101,010,676 - 101,034,526 (-)	RGD

Sequence:

show sequence

TCTGCGTCCAGGTTTCCCGGCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGTAGGCTCCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCG
GATGCACGAACTTCCCGCGGGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTGCCTGCGTGGGGGTCTGAGCGGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGC
CTGCGACGGCCCTAAGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGATAGCATTTCCAAGAAAATGAGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTA
AACTTACATGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAATGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTT
TTATATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCAT
ATCTTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCTGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTA
AGTGCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGAC
CTTAAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTGTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGT
ATATAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATAAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTT
AGCCTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTCCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTAT
TCTTTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTC
TGCCTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTTAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGT
AGAAATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAGTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAA
GACAATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGGTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGT
ATTTTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAATGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATC
AATACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCAGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGG
AAAAACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGTGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCT
TAACAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAATGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATA
TTTGTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTTTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTA
GGCCAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAAATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCT
GTTTCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGGGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGG
TGTAGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATACCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGT
ATCTATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTC

hide sequence

RefSeq Acc Id:

XM_006229292 ⟹ XP_006229354

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,897 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,011 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,878 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

GCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGTAGGCT
CCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCGGATGCACGAACTTCCCGCGGGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTGCCTGCGTGGGGGTCTGAGC
GGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGCCTGCGACGGCCCTAAGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGATAGCATTTCCAAGAAAATG
AGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTAAACTTACATGAACTCCGTAGAGTGGCATGGTGATGGTGGAGTAAAAGAGAGACGTGCTTGCATCAAAGGATGCAAAGTAACAA
GAGGCTGAGGAAGGAAGGCCTAATCGGGGATGCTGAAAGCTGGAAAAAAGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAATGTCACTCACAGGAACTTAAG
TAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTATATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCC
AGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCTTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCTGCATATGCATTTGCTCCGGC
CACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTGCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACTAAGTATTCTAGGATCTACAG
TTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTAAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTGTGGCCTTGATATTCATCTTT
GTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATATAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATAAAAGAGTTGTTGGCTGGAAA
GCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCCTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTCCATTGTGACTCCAATATATT
ATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTTTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAATCATTGTGGGGATATTTTTG
TTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCCTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTTAATAATAATGAAGAAGACTT
ACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAAATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAGTGATTTTTGAGTGTCAGAAT
GTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACAATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGGTAGCTCACTAAAATGACCTC
AGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTTTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAATGTTTTATTTTTTCCATCGGT
GATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCAGGTGGTGATTTGTCACCCAA
ACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAAACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGTGAGCTCTTGGACCTTTTAGT
GTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAACAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAATGACAAGTTGGAACAAAGTTC
TTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTGTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTTTTTTTTAGAAACTGTGAAAA
AAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCCAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAAATTCACCCTCTTCCATGCTA
CCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTTCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGGGGTTAGCTTTGTTCTACTAT
TGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTAGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATACCAGAGAGAACAGGTTTCCCC
TGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCTATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTCATTGAGAATGTGCGTGTTGTA
TATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTTATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGGACAGATGCCGTTACAGCTATT
CATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGCTTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTGTAAAATAAAGCTCAAAGCTTT
TGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATGTTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAGTGATCTTTATTCCTCAGCTTC
CCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCTCAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAGCCCCATAGTGAGATAATTCCC
CTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGGTTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCCCCTCTCCCCCAACTGTTGGCC
TTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTTTATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAATGTTAAGTTCTACTTGTGTTTG
AAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGTACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTATTTCTCTAATCGTTAAGTCATA
TCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAAACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCATCAGAAAAATCCCTAAACTAGT
CATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACAATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTGGAATATTTAGCATGAAAATAT
TTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGACTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTAAGCTTTCAGATCAAAAAGTAC
CCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAAAAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTAGCCCTCAGCTGCTGGCTAGGG
ACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGTGTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGAATCTGGAACTTGCGAATCCTC
TCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGATTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCCCTACCATGTTTCTAATACCAT
AGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAATTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGTCTATTGGCCAGGAGAGGTGGC
TTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTGAGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAAAACCCAAAAGCAAACAAAGAA
AAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTATATAATAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_006229295 ⟹ XP_006229357

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,960,034 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,206 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,907 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

ACGTCACTACTCTGCGTCCAGGTTTCCCGGCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAAT
AAAGGATAGCATTTCCAAGAAAATGAGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTAAACTTACATGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTC
GGTGATCAATGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTATATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATT
TTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCTTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGC
CAATTTTGCTGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTGCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTG
GGTGTTTACTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTAAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTT
GTGGTCATTGTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATATAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGG
TATCACTATAAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCCTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTT
TCAACACTTCCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTTTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGC
TTCTTCACAATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCCTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTA
TGAAGTTCTTAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAAATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCT
GTTATAAAAGTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACAATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATT
TAAACAATGGTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTTTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGC
CTATAAAAATGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAA
ATAAGTCTCAGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAAACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGT
CATCTTATGTGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAACAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCT
TGCATAAAATGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTGTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTT
TTTTTTTTTTTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCCAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTA
GCTTAAAAAAATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTTCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATT
TTGGAGTGGGGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTAGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTA
ACTTAAATACCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCTATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAA
AGTTTCCTCATTGAGAATGTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTTATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCAT
AGGGTCAGGACAGATGCCGTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGCTTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTA
TTTTCTGTGTAAAATAAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATGTTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCC
AGCCTCCAGTGATCTTTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCTCAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCA
CTGGGCAAGCCCCATAGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGGTTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTC
ATGCTGTCCCCTCTCCCCCAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTTTATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCA
GACCTTAATGTTAAGTTCTACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGTACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATT
GATTTTTATTTCTCTAATCGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAAACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTA
AAAGGCCATCAGAAAAATCCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACAATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAAC
TAGCTACTGGAATATTTAGCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGACTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTT
ATAAAGTTAAGCTTTCAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAAAAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTG
ATGAGCTTAGCCCTCAGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGTGTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCA
TCATTGAGAATCTGGAACTTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGATTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTA
AATTGACCCCTACCATGTTTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAATTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATT
ATCAGTTGTCTATTGGCCAGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTGAGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCT
TTCTTCCAAAACCCAAAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTATATAATAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_006229296 ⟹ XP_006229358

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,897 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,823,860 (-)	NCBI
Rnor_6.0	1	114,346,005 - 114,371,615 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

CCTGTAAGCAAGCACCAGGGCTGGGCTGCGGGCTGTCTCGGCCGCCTGAGGTCTGAGAAGGGCTCCAGGGGCGACTTTCTTTTTCGCATGTTCTGAGGTGGACGCAGCTTCCCTTGTGATCCGCAGTG
AGGAAGTCCGTGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGATAGCATTTCCAAGAAAATGAGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTAAACT
TACATGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAATGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTAT
ATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCT
TAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCTGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTG
CCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTA
AATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTGTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATAT
AACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATAAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCC
TTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTCCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTT
TTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCC
TGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTTAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAA
ATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAGTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACA
ATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGGTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTT
TACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAATGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATA
CCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCAGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAA
ACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGTGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAAC
AACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAATGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTG
TAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTTTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCC
AATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAAATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTT
CCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGGGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTA
GTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATACCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCT
ATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTCATTGAGAATGTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTT
ATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGGACAGATGCCGTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGC
TTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTGTAAAATAAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATG
TTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAGTGATCTTTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCT
CAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAGCCCCATAGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGG
TTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCCCCTCTCCCCCAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTT
TATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAATGTTAAGTTCTACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGT
ACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTATTTCTCTAATCGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAA
ACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCATCAGAAAAATCCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACA
ATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTGGAATATTTAGCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGA
CTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTAAGCTTTCAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAA
AAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTAGCCCTCAGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGT
GTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGAATCTGGAACTTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGA
TTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCCCTACCATGTTTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAA
TTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGTCTATTGGCCAGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTG
AGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAAAACCCAAAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTA
TATAATAAAGTGTTCAGTATACAAA

hide sequence

RefSeq Acc Id:

XM_006229297 ⟹ XP_006229359

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,924 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,129 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,878 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

GCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGTAGGCT
CCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCGGATGCACGAACTTCCCGCGGGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTGCCTGCGTGGGGGTCTGAGC
GGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGCCTGCGACGGCCCTAAGGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAATGTCACTCA
CAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTATATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGCCTT
CTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCTTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCTGCATATGC
ATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTGCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACTAAGTATTC
TAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTAAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTGTGGCCTTG
ATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATATAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATAAAAGAGTT
GTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCCTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTCCATTGTGA
CTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTTTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAATCATTGTG
GGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCCTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTTAATAATAA
TGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAAATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAGTGATTTTT
GAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACAATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGGTAGCTCAC
TAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTTTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAATGTTTTATT
TTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCAGGTGGTGA
TTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAAACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGTGAGCTCTT
GGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAACAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAATGACAAGTT
GGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTGTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTTTTTTTTAG
AAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCCAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAAATTCACCC
TCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTTCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGGGGTTAGCT
TTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTAGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATACCAGAGAGA
ACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCTATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTCATTGAGAAT
GTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTTATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGGACAGATGCC
GTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGCTTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTGTAAAATAAA
GCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATGTTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAGTGATCTTTA
TTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCTCAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAGCCCCATAGT
GAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGGTTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCCCCTCTCCCC
CAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTTTATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAATGTTAAGTTC
TACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGTACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTATTTCTCTAAT
CGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAAACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCATCAGAAAAAT
CCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACAATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTGGAATATTTA
GCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGACTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTAAGCTTTCAG
ATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAAAAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTAGCCCTCAGC
TGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGTGTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGAATCTGGAAC
TTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGATTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCCCTACCATGT
TTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAATTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGTCTATTGGCC
AGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTGAGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAAAACCCAAAA
GCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTATATAATAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_006229298 ⟹ XP_006229360

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,916 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,198 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,891 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

TCCAGGTTTCCCGGCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAA
TGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTATATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAA
AAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCTTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGC
TGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTGCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTAC
TAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTAAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATT
GTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATATAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTAT
AAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCCTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTT
CCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTTTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACA
ATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCCTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCT
TAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAAATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAA
GTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACAATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATG
GTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTTTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAA
TGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTC
AGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAAACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATG
TGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAACAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAA
TGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTGTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTT
TTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCCAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAA
AATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTTCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGG
GGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTAGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATA
CCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCTATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTC
ATTGAGAATGTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTTATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGG
ACAGATGCCGTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGCTTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTG
TAAAATAAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATGTTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAG
TGATCTTTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCTCAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAG
CCCCATAGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGGTTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCC
CCTCTCCCCCAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTTTATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAAT
GTTAAGTTCTACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGTACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTAT
TTCTCTAATCGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAAACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCAT
CAGAAAAATCCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACAATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTG
GAATATTTAGCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGACTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTA
AGCTTTCAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAAAAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTA
GCCCTCAGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGTGTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGA
ATCTGGAACTTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGATTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCC
CTACCATGTTTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAATTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGT
CTATTGGCCAGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTGAGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAA
AACCCAAAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTATATAATAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_017589153 ⟹ XP_017444642

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,913 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,011 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,897 (-)	NCBI

Sequence:

show sequence

TCTGCGTCCAGGTTTCCCGGCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGTAGGCTCCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCG
GATGCACGAACTTCCCGCGGGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTGCCTGCGTGGGGGTCTGAGCGGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGC
CTGCGACGGCCCTAAGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGATAGCATTTCCAAGAAAATGAGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTA
AACTTACATGGTCTCTCACTGAACCTGTGGCTGAGCTGGCAAGAAGCAAGCCTGAGCAGTCCTATTGTCTGCTTTCTCCCCTGTTCCTAGTGCCGCCGCCATTAGAGGAGGCTGAGGAAGGAAGGCCT
AATCGGGGATGCTGAAAGCTGGAAAAAAGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAATGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGG
GGCGTGGAAAATATGACTTTTATATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCA
GGTCAAGGAGGCCATGCATATCTTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCTGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGG
TGCACTCAGCGTCCTTGTAAGTGCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAA
AGGAAGAGGAGATTGAGACCTTAAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTGTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGA
CAGACAAACATTCTTGTGTATATAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATAAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCT
CGCCTGGATTCTGCTGCTTAGCCTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTCCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAG
TTTTGACGTGTTCAGCTATTCTTTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTC
AGTTTTAGTCTAGCAAGTCTGCCTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTTAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACAC
TGGTGAAAATATCTCCCGTAGAAATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAGTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCC
TCAAATAATGTCCTCTAAAGACAATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGGTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAAT
AACATATTATTGTAAAGGTATTTTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAATGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACAT
TTGTGATCCCCATTTCATCAATACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCAGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACA
TCTGCTGGCCTCCTTTTGGAAAAACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGTGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGAT
TACATTGTCATTCAGCCCTTAACAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAATGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCA
AATGCTTAGATTTAAAATATTTGTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTTTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCA
AATAGGTACAAAAAGGTTAGGCCAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAAATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACT
GAGGTTTGGGCCTGTGCCTGTTTCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGGGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTG
CCTTGTGGGCCATACTGGGTGTAGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATACCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTT
TGTCTATTTTATGTACTGTATCTATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTCATTGAGAATGTGCGTGTTGTATATACAACACTTTATATATAT
GTAATCTTGTACACAAGCATTTTATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGGACAGATGCCGTTACAGCTATTCATATCAACAAAAAATATTTT
AGGTAACTTTTTGATAAATAGGCTTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTGTAAAATAAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGC
CCAATGATGTTTCTCTATTTATGTTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAGTGATCTTTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGT
GGCATATCACAGTACCAGATTCTCAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAGCCCCATAGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGT
ATGCTGTAGCTGTTAGGGTCAGGTTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCCCCTCTCCCCCAACTGTTGGCCTTAAAGAGTAGATGCACATAC
CATACAAGTTCTCATGTTCCTTTTATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAATGTTAAGTTCTACTTGTGTTTGAAAGATGCCATGATCTGAACA
CGTCCTGGGAAATGTGGGTATGTACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTATTTCTCTAATCGTTAAGTCATATCTCACGAATCAGACTCACAG
TTTGATTTACTTGAACAGGGGAAACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCATCAGAAAAATCCCTAAACTAGTCATTAAATTTAAAGTAATTGG
TAGGGTTTTTTTTTTTAAATACAATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTGGAATATTTAGCATGAAAATATTTGTTAAGACCATAATGGCAA
CAACTAGTAACCATATTCTCAGACTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTAAGCTTTCAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAG
ACATAATGGAAAATAGCCCCTAAAAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTAGCCCTCAGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGA
AGCAGCGTACATGTTCCACAGGTGTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGAATCTGGAACTTGCGAATCCTCTCCACCATCTTCTTCAATGGC
TAAAATTAGATCAGACTGTTAGATTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCCCTACCATGTTTCTAATACCATAGTTGGAGTAATGAATACATT
TCCAATTTAAATTCACCTTGTAATTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGTCTATTGGCCAGGAGAGGTGGCTTATGTCAATATTATACTACT
CAAGATAAAACAGGTTTACTTTGAGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAAAACCCAAAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAAT
CTGGAATATTAACATATATATTATATAATAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_017589154 ⟹ XP_017444643

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,910 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,011 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,878 (-)	NCBI

Sequence:

show sequence

GCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGTAGGCT
CCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCGGATGCACGAACTTCCCGCGGGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTGCCTGCGTGGGGGTCTGAGC
GGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGCCTGCGACGGCCCTAAGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGATAGCATTTCCAAGAAAATG
AGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTAAACTTACATGAACTCCGTAGAGTGGCATGGTGATGGTGGAGTAAAAGAGAGACGTGCTTGCATCAAAGGATGCAAAGTAACAA
GTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAATGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTATATTGG
TCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCTTAAGG
AATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCTGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTGCCATT
CTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTAAATGA
AATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTGTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATATAACAA
TCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATAAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCCTTGTG
GTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTCCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTTTTTAA
AGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCCTGTAA
CTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTTAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAAATGGA
AATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAGTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACAATCTT
TTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGGTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTTTACAT
TTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAATGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATACCTCA
TCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCAGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAAACCCA
CTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGTGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAACAACTC
TGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAATGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTGTAGAA
TACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTTTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCCAATGT
AAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAAATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTTCCTGT
TTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGGGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTAGTCAC
AGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATACCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCTATGTC
TTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTCATTGAGAATGTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTTATTTG
GCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGGACAGATGCCGTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGCTTGTT
TAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTGTAAAATAAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATGTTTGT
TTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAGTGATCTTTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCTCAATT
TCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAGCCCCATAGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGGTTCCC
TCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCCCCTCTCCCCCAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTTTATGG
ACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAATGTTAAGTTCTACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGTACAGG
GACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTATTTCTCTAATCGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAAACAAT
TTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCATCAGAAAAATCCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACAATTAG
TTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTGGAATATTTAGCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGACTTCC
CAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTAAGCTTTCAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAAAAATT
TCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTAGCCCTCAGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGTGTGCT
CTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGAATCTGGAACTTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGATTTAT
TGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCCCTACCATGTTTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAATTTTG
GTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGTCTATTGGCCAGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTGAGTTC
AAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAAAACCCAAAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTATATAA
TAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_039112506 ⟹ XP_038968434

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,913 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,011 (-)	NCBI

RefSeq Acc Id:

XM_063262371 ⟹ XP_063118441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,916 (-)	NCBI

RefSeq Acc Id:

XM_063262372 ⟹ XP_063118442

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,897 (-)	NCBI

RefSeq Acc Id:

XM_063262375 ⟹ XP_063118445

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,897 (-)	NCBI

RefSeq Acc Id:

XM_063262383 ⟹ XP_063118453

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,898 (-)	NCBI


Protein RefSeqs	NP_001100988	(Get FASTA)	NCBI Sequence Viewer
	XP_006229354	(Get FASTA)	NCBI Sequence Viewer
	XP_006229357	(Get FASTA)	NCBI Sequence Viewer
	XP_006229358	(Get FASTA)	NCBI Sequence Viewer
	XP_006229359	(Get FASTA)	NCBI Sequence Viewer
	XP_006229360	(Get FASTA)	NCBI Sequence Viewer
	XP_017444642	(Get FASTA)	NCBI Sequence Viewer
	XP_017444643	(Get FASTA)	NCBI Sequence Viewer
	XP_038968434	(Get FASTA)	NCBI Sequence Viewer
	XP_063118441	(Get FASTA)	NCBI Sequence Viewer
	XP_063118442	(Get FASTA)	NCBI Sequence Viewer
	XP_063118445	(Get FASTA)	NCBI Sequence Viewer
	XP_063118453	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL86457	(Get FASTA)	NCBI Sequence Viewer
	EDL86458	(Get FASTA)	NCBI Sequence Viewer
	EDL86459	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000018028
	ENSRNOP00000018028.3

RefSeq Acc Id:

NP_001100988 ⟸ NM_001107518

- UniProtKB:

D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI
HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF
TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAVNGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF

hide sequence

RefSeq Acc Id:	XP_006229357 ⟸ XM_006229295
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAVNGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

RefSeq Acc Id:	XP_006229360 ⟸ XM_006229298
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAVNGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

RefSeq Acc Id:	XP_006229359 ⟸ XM_006229297
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAVNGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

RefSeq Acc Id:	XP_006229354 ⟸ XM_006229292
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAVNGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZUV1-F1-model_v2	AlphaFold	D3ZUV1	1-359	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13690085

Promoter ID:

EPDNEW_R609

Type:

initiation region

Name:

Nipa2_1

Description:

non imprinted in Prader-Willi/Angelman syndrome 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	114,371,876 - 114,371,936	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-59459	BioCyc
Ensembl Genes	ENSRNOG00000012690	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000018028	ENTREZGENE
	ENSRNOT00000018028.5	UniProtKB/TrEMBL
Gene3D-CATH	1.10.3730.20	UniProtKB/TrEMBL
InterPro	DUF803	UniProtKB/TrEMBL
KEGG Report	rno:308667	UniProtKB/TrEMBL
NCBI Gene	308667	ENTREZGENE
PANTHER	DUF803	UniProtKB/TrEMBL
	MAGNESIUM TRANSPORTER NIPA2	UniProtKB/TrEMBL
Pfam	DUF803	UniProtKB/TrEMBL
PhenoGen	Nipa2	PhenoGen
RatGTEx	ENSRNOG00000012690	RatGTEx
Superfamily-SCOP	Multidrug resistance efflux transporter EmrE	UniProtKB/TrEMBL
UniProt	A6KD29	ENTREZGENE, UniProtKB/TrEMBL
	D3ZUV1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-03-01	Nipa2	NIPA magnesium transporter 2	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-02-27	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	Nipa2_predicted	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Nipa2_predicted	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) (predicted)	RGD1306051_predicted	similar to hypothetical protein MGC5466 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1306051_predicted	similar to hypothetical protein MGC5466 (predicted)	LOC308667_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC308667_predicted	similar to hypothetical protein MGC5466 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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Imported Disease Annotations - ClinVar