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Gene: Nipa2 (NIPA magnesium transporter 2) Rattus norvegicus

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Symbol:

Nipa2

Name:

NIPA magnesium transporter 2

RGD ID:

1306051

Description:

Predicted to enable magnesium ion transmembrane transporter activity. Predicted to be involved in magnesium ion transport. Predicted to be located in early endosome and plasma membrane. Predicted to be active in membrane. Orthologous to human NIPA2 (NIPA magnesium transporter 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC308667; magnesium transporter NIPA2; non imprinted in Prader-Willi/Angelman syndrome 2; non imprinted in Prader-Willi/Angelman syndrome 2 homolog; non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human); RGD1306051; similar to hypothetical protein MGC5466; SLC56A2; solute carrier family 56 member 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NIPA2 (NIPA magnesium transporter 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Nipa2 (non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nipa2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NIPA2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NIPA2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nipa2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NIPA2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NIPA2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nipa2 (NIPA magnesium transporter 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PRSS27 (serine protease 27)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	NIPA2 (NIPA magnesium transporter 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Nipa2 (non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	nipa2 (NIPA magnesium transporter 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nipa-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	spict	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	nipa2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	115,935,759 - 115,960,034 (-)	NCBI		GRCr8
mRatBN7.2	1	106,799,979 - 106,824,206 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	106,800,903 - 106,824,126 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	112,189,907 - 112,213,732 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	120,661,776 - 120,685,605 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	113,910,729 - 113,934,562 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	114,346,005 - 114,371,907 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	114,348,038 - 114,371,897 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	107,335,238 - 107,359,088 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	107,414,466 - 107,437,394 (-)	NCBI
Celera	1	101,010,676 - 101,034,526 (-)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Angelman syndrome (ISO)

autism spectrum disorder (ISO)

autistic disorder (ISO)

chromosome 15q11.2 deletion syndrome (ISO)

hereditary spastic paraplegia 6 (ISO)

intellectual disability (ISO)

Neurodevelopmental Disorders (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

alpha-pinene (ISO)

amitrole (EXP)

amphetamine (EXP)

antirheumatic drug (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

carbon nanotube (ISO)

crocidolite asbestos (ISO)

diazinon (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

fulvestrant (ISO)

gentamycin (EXP)

methimazole (EXP)

ozone (ISO)

paracetamol (ISO)

pirinixic acid (ISO)

resveratrol (ISO)

sulfadimethoxine (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

magnesium ion transmembrane transport (IEA)

magnesium ion transport (IBA,IEA,ISO)

Cellular Component

early endosome (IEA,ISO)

membrane (IBA,IEA)

plasma membrane (IEA,ISO)

Molecular Function

magnesium ion transmembrane transporter activity (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:18667602

Genomics

Comparative Map Data

Nipa2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	115,935,759 - 115,960,034 (-)	NCBI		GRCr8
mRatBN7.2	1	106,799,979 - 106,824,206 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	106,800,903 - 106,824,126 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	112,189,907 - 112,213,732 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	120,661,776 - 120,685,605 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	113,910,729 - 113,934,562 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	114,346,005 - 114,371,907 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	114,348,038 - 114,371,897 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	107,335,238 - 107,359,088 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	107,414,466 - 107,437,394 (-)	NCBI
Celera	1	101,010,676 - 101,034,526 (-)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

NIPA2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	22,838,666 - 22,868,384 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	22,838,644 - 22,869,362 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	23,004,684 - 23,034,402 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	20,556,788 - 20,585,849 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	20,556,789 - 20,585,849	NCBI
Celera	15	1,345,448 - 1,375,128 (+)	NCBI		Celera
Cytogenetic Map	15	q11.2	NCBI
HuRef	15	1,317,064 - 1,346,346 (-)	NCBI		HuRef
CHM1_1	15	22,953,969 - 22,983,718 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	20,510,413 - 20,540,236 (+)	NCBI		T2T-CHM13v2.0

Nipa2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	55,581,014 - 55,612,241 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	55,581,035 - 55,612,224 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	55,931,266 - 55,962,493 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	55,931,287 - 55,962,476 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	63,186,957 - 63,217,820 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	55,799,606 - 55,830,469 (-)	NCBI		MGSCv36	mm8
Celera	7	53,285,203 - 53,308,910 (-)	NCBI		Celera
Cytogenetic Map	7	B5	NCBI
cM Map	7	33.42	NCBI

Nipa2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955533	1,204,429 - 1,223,519 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955533	1,204,429 - 1,223,512 (-)	NCBI	ChiLan1.0	ChiLan1.0

NIPA2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	12,173,593 - 12,202,697 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	15,900,460 - 15,928,907 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	15	20,574,757 - 20,603,765 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	20,574,757 - 20,603,745 (-)	Ensembl	panpan1.1		panPan2

NIPA2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	32,051,313 - 32,095,379 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	32,062,708 - 32,094,491 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	34,587,552 - 34,620,417 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	32,241,212 - 32,274,095 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	32,239,317 - 32,274,094 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	31,774,940 - 31,807,664 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	32,024,153 - 32,057,027 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	32,134,896 - 32,167,787 (-)	NCBI		UU_Cfam_GSD_1.0

Nipa2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	120,484,308 - 120,524,949 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936471	38,332,371 - 38,359,239 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NIPA2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	32,175,104 - 32,202,200 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	32,175,096 - 32,202,366 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

NIPA2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	53,675,253 - 53,715,695 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	53,676,125 - 53,697,733 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	36,406,108 - 36,442,463 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nipa2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624896	2,695,373 - 2,724,316 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624896	2,695,468 - 2,724,316 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Nipa2
132 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	751
Count of miRNA genes:	293
Interacting mature miRNAs:	372
Transcripts:	ENSRNOT00000018028
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	5925874	115540829	Rat
1582234	Gluco18	Glucose level QTL 18	3.4	0.0003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	78479925	123479925	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	30882023	123479925	Rat
1578780	Cm52	Cardiac mass QTL 52	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	1	81591954	219808434	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	49393172	159356837	Rat
1300121	Hrtrt1	Heart rate QTL 1	3.7		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	65789093	115540829	Rat
9590300	Scort16	Serum corticosterone level QTL 16	4.39	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	103111621	148111621	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	57336763	151090257	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	90532338	123479925	Rat
631569	Bp93	Blood pressure QTL 93		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	106047847	121834139	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	48963584	144267916	Rat
61344	Bp29	Blood pressure QTL 29	7.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	78350581	123350581	Rat
724521	Uae1	Urinary albumin excretion QTL 1	3.8	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	90508614	173018436	Rat
1358902	Bw47	Body weight QTL 47	1.67		body mass (VT:0001259)	body weight (CMO:0000012)	1	90508614	180359386	Rat
61346	Rf2	Renal disease susceptibility QTL 2	3.7		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	1	99267916	144267916	Rat
2313094	Bss58	Bone structure and strength QTL 58	3.7	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	43284731	118944897	Rat
8655649	Arrd1	Age-related retinal degeneration QTL 1	4.89		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	100357752	183970443	Rat
2313099	Bss56	Bone structure and strength QTL 56	2.4	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	1	43284731	118944897	Rat
2313098	Bmd70	Bone mineral density QTL 70	3.6	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	43284731	118944897	Rat
1300153	Bp171	Blood pressure QTL 171	3.37		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	90664883	143200202	Rat
2317833	Alcrsp19	Alcohol response QTL 19	12.4	0.001	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	1	100979852	145979852	Rat
731168	Bp154	Blood pressure QTL 154	3.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	94642644	214537671	Rat
1641897	Alcrsp1	Alcohol response QTL 1			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	1	100979852	145979852	Rat
1331749	Hrtrt11	Heart rate QTL 11	2.973		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	94494440	198211706	Rat
1331751	Bp199	Blood pressure QTL 199	3.60022		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	94494440	181830018	Rat
2293142	Bp314	Blood pressure QTL 314			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	92184926	137184926	Rat
724529	Cm16	Cardiac mass QTL 16	2.7		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	1	87580395	150700247	Rat
61370	Mcs3	Mammary carcinoma susceptibility QTL 3	2.15		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	102268556	147268556	Rat
2313059	Bss55	Bone structure and strength QTL 55	3.2	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	1	43284731	118944897	Rat
70209	Niddm23	Non-insulin dependent diabetes mellitus QTL 23	2.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	94494440	198324465	Rat
631496	Bp97	Blood pressure QTL 97	3.08		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	106047847	151047847	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	49393289	199050459	Rat
2303591	Gluco41	Glucose level QTL 41	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	102168504	147168504	Rat
1331793	Bp200	Blood pressure QTL 200	3.71601		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	94494440	172949803	Rat
1354591	Cm36	Cardiac mass QTL 36	4.1		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	102813953	201278233	Rat
1331800	Scl25	Serum cholesterol level QTL 25	3.013		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	94494440	117601394	Rat
7421628	Bp361	Blood pressure QTL 361		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	66023617	118608521	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	32356093	162846471	Rat
2313072	Bss53	Bone structure and strength QTL 53	4.3	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	43284731	118944897	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	32737458	199368955	Rat
2313078	Bss54	Bone structure and strength QTL 54	3.5	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	1	43284731	118944897	Rat
61399	Tcat1	Tongue tumor resistance QTL 1	3.3		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 5 mm (CMO:0001879)	1	99267916	144267916	Rat
2313083	Bmd74	Bone mineral density QTL 74	4	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	82174743	118944897	Rat
4889494	Scort2	Serum corticosterone level QTL 2	4.2		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	80592172	125592172	Rat
724567	Tcas6	Tongue tumor susceptibility QTL 6	6.85		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	1	92948896	144267916	Rat
1354615	Cm32	Cardiac mass QTL 32	5.2		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	1	102813953	201278233	Rat
1358192	Ept13	Estrogen-induced pituitary tumorigenesis QTL 13	3.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	77494165	122494165	Rat
8694370	Bw154	Body weight QTL 154	8.91	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	1	103111621	148111621	Rat
1354623	Rf46	Renal function QTL 46	3.8		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	1	102813953	151162766	Rat
738022	Anxrr13	Anxiety related response QTL 13	4.6	0.00039	locomotor behavior trait (VT:0001392)	number of 20 x 20 cm floor squares crossed into, out of or within a discrete space in an experimental apparatus (CMO:0001514)	1	83547917	128547917	Rat
10054135	Gmadr2	Adrenal mass QTL 2	1.97	0.0129	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	77857876	122857876	Rat
7411712	Strs4	Sensitivity to stroke QTL 4	8.7		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	1	78430536	123430536	Rat
2313051	Bss57	Bone structure and strength QTL 57	3.7	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	43284731	118944897	Rat
1354606	Bp246	Blood pressure QTL 246	3.6		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	102813953	218753816	Rat

Markers in Region

RH128015

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	106,800,255 - 106,800,468 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	114,348,001 - 114,348,213	NCBI	Rnor6.0
Rnor_5.0	1	115,354,378 - 115,354,590	UniSTS	Rnor5.0
RGSC_v3.4	1	107,335,201 - 107,335,413	UniSTS	RGSC3.4
Celera	1	101,010,639 - 101,010,851	UniSTS
RH 3.4 Map	1	939.8	UniSTS
Cytogenetic Map	1	q22	UniSTS

RH141851

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	106,800,961 - 106,801,148 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	114,348,707 - 114,348,893	NCBI	Rnor6.0
Rnor_5.0	1	115,355,084 - 115,355,270	UniSTS	Rnor5.0
RGSC_v3.4	1	107,335,907 - 107,336,093	UniSTS	RGSC3.4
Celera	1	101,011,345 - 101,011,531	UniSTS
RH 3.4 Map	1	940.39	UniSTS
Cytogenetic Map	1	q22	UniSTS

AI598964

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	106,800,573 - 106,800,725 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	114,348,319 - 114,348,470	NCBI	Rnor6.0
Rnor_5.0	1	115,354,696 - 115,354,847	UniSTS	Rnor5.0
RGSC_v3.4	1	107,335,519 - 107,335,670	UniSTS	RGSC3.4
Celera	1	101,010,957 - 101,011,108	UniSTS
RH 3.4 Map	1	939.5	UniSTS
Cytogenetic Map	1	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229297	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000018028 ⟹ ENSRNOP00000018028

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	106,800,903 - 106,824,126 (-)	Ensembl
Rnor_6.0 Ensembl	1	114,348,038 - 114,371,897 (-)	Ensembl

RefSeq Acc Id:

NM_001107518 ⟹ NP_001100988

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,936,063 - 115,959,913 (-)	NCBI
mRatBN7.2	1	106,800,293 - 106,824,144 (-)	NCBI
Rnor_6.0	1	114,348,038 - 114,371,897 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI
RGSC_v3.4	1	107,335,238 - 107,359,088 (-)	RGD
Celera	1	101,010,676 - 101,034,526 (-)	RGD

Sequence:

show sequence

TCTGCGTCCAGGTTTCCCGGCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGA
AGGCTGTCCGAGGTAGGCTCCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCG
GATGCACGAACTTCCCGCGGGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTG
CCTGCGTGGGGGTCTGAGCGGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGC
CTGCGACGGCCCTAAGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGA
TAGCATTTCCAAGAAAATGAGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTA
AACTTACATGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGAT
CAATGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTT
TTATATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAA
AAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCAT
ATCTTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTT
TGCTGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTA
AGTGCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTT
TACTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGAC
CTTAAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTC
ATTGTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGT
ATATAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCAC
TATAAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTT
AGCCTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACA
CTTCCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTAT
TCTTTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTC
ACAATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTC
TGCCTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGT
TCTTAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGT
AGAAATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATA
AAAGTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAA
GACAATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACA
ATGGTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGT
ATTTTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAA
AAATGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATC
AATACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGT
CTCAGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGG
AAAAACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTT
ATGTGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCT
TAACAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATA
AAATGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATA
TTTGTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTT
TTTTTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTA
GGCCAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAA
AAAAATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCT
GTTTCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAG
TGGGGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGG
TGTAGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAA
ATACCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGT
ATCTATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTC

hide sequence

RefSeq Acc Id:

XM_006229292 ⟹ XP_006229354

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,897 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,011 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,878 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

GCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGTAGGCT
CCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCGGATGCACGAACTTCCCGCG
GGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTGCCTGCGTGGGGGTCTGAGC
GGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGCCTGCGACGGCCCTAAGGGT
GGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGATAGCATTTCCAAGAAAATG
AGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTAAACTTACATGAACTCCGTA
GAGTGGCATGGTGATGGTGGAGTAAAAGAGAGACGTGCTTGCATCAAAGGATGCAAAGTAACAA
GAGGCTGAGGAAGGAAGGCCTAATCGGGGATGCTGAAAGCTGGAAAAAAGTTTGAAGACTGCAT
CATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAATGTCACTCACAGGAACTTAAG
TAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTATATTGGTCTTGGATTGGCTAT
GACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCC
AGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCTTAAGGAATGGTTATGGTGGG
CTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCTGCATATGCATTTGCTCCGGC
CACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTGCCATTCTGTCTTCATACTTC
CTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACTAAGTATTCTAGGATCTACAG
TTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTAAATGAAATGTCACATAAGTT
AGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTGTGGCCTTGATATTCATCTTT
GTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATATAACAATCTGCTCTGTGATTG
GAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATAAAAGAGTTGTTGGCTGGAAA
GCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCCTTGTGGTCTGTGTGAGCACA
CAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTCCATTGTGACTCCAATATATT
ATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTTTTTAAAGAATGGCAAGATAT
GCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAATCATTGTGGGGATATTTTTG
TTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCCTGTAACTTTTCGAAAAGATG
AAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTTAATAATAATGAAGAAGACTT
ACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAAATGGAAATCTGACATCTTTT
TAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAGTGATTTTTGAGTGTCAGAAT
GTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACAATCTTTTTTTTAAGTTTTCA
CTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGGTAGCTCACTAAAATGACCTC
AGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTTTACATTTTTATTCATACTCC
AGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAATGTTTTATTTTTTCCATCGGT
GATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATACCTCATCACACCAAGGCTTC
TTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCAGGTGGTGATTTGTCACCCAA
ACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAAACCCACTGTGCTATCAGTCA
GTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGTGAGCTCTTGGACCTTTTAGT
GTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAACAACTCTGGGATGTCAACAGA
GACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAATGACAAGTTGGAACAAAGTTC
TTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTGTAGAATACATCTCTTTGAAC
CAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTTTTTTTTAGAAACTGTGAAAA
AAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCCAATGTAAGGAACACTCTCCA
GCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAAATTCACCCTCTTCCATGCTA
CCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTTCCTGTTTCCTCCCTACAGTT
ATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGGGGTTAGCTTTGTTCTACTAT
TGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTAGTCACAGTCCACAAATGTTG
TAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATACCAGAGAGAACAGGTTTCCCC
TGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCTATGTCTTATTTTGCACATAA
AAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTCATTGAGAATGTGCGTGTTGTA
TATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTTATTTGGCCTATCACTTGGTA
ATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGGACAGATGCCGTTACAGCTATT
CATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGCTTGTTTAAAATGTAACTCAG
GTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTGTAAAATAAAGCTCAAAGCTTT
TGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATGTTTGTTTTTAAGACAGGGAT
CTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAGTGATCTTTATTCCTCAGCTTC
CCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCTCAATTTCTCTCCTCTTTCTC
TACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAGCCCCATAGTGAGATAATTCCC
CTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGGTTCCCTCTCCCCTGCCTCCC
TGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCCCCTCTCCCCCAACTGTTGGCC
TTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTTTATGGACAACGCAATTGTTG
TATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAATGTTAAGTTCTACTTGTGTTTG
AAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGTACAGGGACAGACTATCTTGC
TCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTATTTCTCTAATCGTTAAGTCATA
TCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAAACAATTTCACTATATTGGCA
TAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCATCAGAAAAATCCCTAAACTAGT
CATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACAATTAGTTGGTATTATGCTCT
TATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTGGAATATTTAGCATGAAAATAT
TTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGACTTCCCAATTCCAAAGGCAT
ATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTAAGCTTTCAGATCAAAAAGTAC
CCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAAAAATTTCAATATAGTTTACA
TAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTAGCCCTCAGCTGCTGGCTAGGG
ACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGTGTGCTCTCCCCATCTCCAGA
TTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGAATCTGGAACTTGCGAATCCTC
TCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGATTTATTGTACTTTAAAATTC
AACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCCCTACCATGTTTCTAATACCAT
AGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAATTTTGGTATTGCTAAGTATA
GACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGTCTATTGGCCAGGAGAGGTGGC
TTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTGAGTTCAAGGACAGCCTGGAC
ACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAAAACCCAAAAGCAAACAAAGAA
AAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTATATAATAAAGTGTTCAGTAT
A

hide sequence

RefSeq Acc Id:

XM_006229295 ⟹ XP_006229357

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,960,034 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,206 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,907 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

ACGTCACTACTCTGCGTCCAGGTTTCCCGGCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCG
GTGCGGCCGAAGGCTGTCCGAGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAAT
AAAGGATAGCATTTCCAAGAAAATGAGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACC
ATATTAAACTTACATGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTC
GGTGATCAATGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATA
TGACTTTTATATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATT
TTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCC
ATGCATATCTTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGC
CAATTTTGCTGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTC
CTTGTAAGTGCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTG
GGTGTTTACTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGAT
TGAGACCTTAAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTT
GTGGTCATTGTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTC
TTGTGTATATAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGG
TATCACTATAAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTG
CTGCTTAGCCTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTT
TCAACACTTCCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTC
AGCTATTCTTTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGC
TTCTTCACAATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAG
CAAGTCTGCCTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTA
TGAAGTTCTTAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATC
TCCCGTAGAAATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCT
GTTATAAAAGTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCC
TCTAAAGACAATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATT
TAAACAATGGTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGT
AAAGGTATTTTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGC
CTATAAAAATGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCAT
TTCATCAATACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAA
ATAAGTCTCAGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCC
TTTTGGAAAAACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGT
CATCTTATGTGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTC
AGCCCTTAACAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCT
TGCATAAAATGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTT
AAAATATTTGTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTT
TTTTTTTTTTTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAA
AGGTTAGGCCAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTA
GCTTAAAAAAATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCT
GTGCCTGTTTCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATT
TTGGAGTGGGGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCAT
ACTGGGTGTAGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTA
ACTTAAATACCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATG
TACTGTATCTATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAA
AGTTTCCTCATTGAGAATGTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACA
CAAGCATTTTATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCAT
AGGGTCAGGACAGATGCCGTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTG
ATAAATAGGCTTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTA
TTTTCTGTGTAAAATAAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTC
TCTATTTATGTTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCC
AGCCTCCAGTGATCTTTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGT
ACCAGATTCTCAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCA
CTGGGCAAGCCCCATAGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGT
TAGGGTCAGGTTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTC
ATGCTGTCCCCTCTCCCCCAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTC
ATGTTCCTTTTATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCA
GACCTTAATGTTAAGTTCTACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAAT
GTGGGTATGTACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATT
GATTTTTATTTCTCTAATCGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTG
AACAGGGGAAACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTA
AAAGGCCATCAGAAAAATCCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTT
TTTAAATACAATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAAC
TAGCTACTGGAATATTTAGCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCA
TATTCTCAGACTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTT
ATAAAGTTAAGCTTTCAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAA
TAGCCCCTAAAAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTG
ATGAGCTTAGCCCTCAGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATG
TTCCACAGGTGTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCA
TCATTGAGAATCTGGAACTTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCA
GACTGTTAGATTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTA
AATTGACCCCTACCATGTTTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATT
CACCTTGTAATTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATT
ATCAGTTGTCTATTGGCCAGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAG
GTTTACTTTGAGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCT
TTCTTCCAAAACCCAAAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAAC
ATATATATTATATAATAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_006229296 ⟹ XP_006229358

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,897 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,823,860 (-)	NCBI
Rnor_6.0	1	114,346,005 - 114,371,615 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

CCTGTAAGCAAGCACCAGGGCTGGGCTGCGGGCTGTCTCGGCCGCCTGAGGTCTGAGAAGGGCT
CCAGGGGCGACTTTCTTTTTCGCATGTTCTGAGGTGGACGCAGCTTCCCTTGTGATCCGCAGTG
AGGAAGTCCGTGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGATAGC
ATTTCCAAGAAAATGAGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTAAACT
TACATGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAAT
GTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTAT
ATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAA
AAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCT
TAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCT
GCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTG
CCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACT
AAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTA
AATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTG
TGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATAT
AACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATA
AAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCC
TTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTC
CATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTT
TTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAA
TCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCC
TGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTT
AATAATAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAA
ATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAG
TGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACA
ATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGG
TAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTT
TACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAAT
GTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATA
CCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCA
GGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAA
ACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGT
GAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAAC
AACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAAT
GACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTG
TAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTT
TTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCC
AATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAA
ATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTT
CCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGG
GGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTA
GTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATAC
CAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCT
ATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTCA
TTGAGAATGTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTT
ATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGGA
CAGATGCCGTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGC
TTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTGT
AAAATAAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATG
TTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAGT
GATCTTTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCT
CAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAGC
CCCATAGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGG
TTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCCC
CTCTCCCCCAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTT
TATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAATG
TTAAGTTCTACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGT
ACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTATT
TCTCTAATCGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAA
ACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCATC
AGAAAAATCCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACA
ATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTGG
AATATTTAGCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGA
CTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTAA
GCTTTCAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAA
AAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTAG
CCCTCAGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGT
GTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGAA
TCTGGAACTTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGA
TTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCCC
TACCATGTTTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAA
TTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGTC
TATTGGCCAGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTG
AGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAAA
ACCCAAAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTA
TATAATAAAGTGTTCAGTATACAAA

hide sequence

RefSeq Acc Id:

XM_006229297 ⟹ XP_006229359

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,924 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,129 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,878 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

GCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGTAGGCT
CCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCGGATGCACGAACTTCCCGCG
GGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTGCCTGCGTGGGGGTCTGAGC
GGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGCCTGCGACGGCCCTAAGGTT
TGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAATGTCACTCA
CAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTATATTGGTCT
TGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGCCTT
CTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCTTAAGGAAT
GGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCTGCATATGC
ATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTGCCATTCTG
TCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACTAAGTATTC
TAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTAAATGAAAT
GTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTGTGGCCTTG
ATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATATAACAATCT
GCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATAAAAGAGTT
GTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCCTTGTGGTC
TGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTCCATTGTGA
CTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTTTTTAAAGA
ATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAATCATTGTG
GGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCCTGTAACTT
TTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTTAATAATAA
TGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAAATGGAAAT
CTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAGTGATTTTT
GAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACAATCTTTTT
TTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGGTAGCTCAC
TAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTTTACATTTT
TATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAATGTTTTATT
TTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATACCTCATCA
CACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCAGGTGGTGA
TTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAAACCCACTG
TGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGTGAGCTCTT
GGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAACAACTCTGG
GATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAATGACAAGTT
GGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTGTAGAATAC
ATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTTTTTTTTAG
AAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCCAATGTAAG
GAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAAATTCACCC
TCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTTCCTGTTTC
CTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGGGGTTAGCT
TTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTAGTCACAGT
CCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATACCAGAGAGA
ACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCTATGTCTTA
TTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTCATTGAGAAT
GTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTTATTTGGCC
TATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGGACAGATGCC
GTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGCTTGTTTAA
AATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTGTAAAATAAA
GCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATGTTTGTTTT
TAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAGTGATCTTTA
TTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCTCAATTTCT
CTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAGCCCCATAGT
GAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGGTTCCCTCT
CCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCCCCTCTCCCC
CAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTTTATGGACA
ACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAATGTTAAGTTC
TACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGTACAGGGAC
AGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTATTTCTCTAAT
CGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAAACAATTTC
ACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCATCAGAAAAAT
CCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACAATTAGTTG
GTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTGGAATATTTA
GCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGACTTCCCAA
TTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTAAGCTTTCAG
ATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAAAAATTTCA
ATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTAGCCCTCAGC
TGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGTGTGCTCTC
CCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGAATCTGGAAC
TTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGATTTATTGT
ACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCCCTACCATGT
TTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAATTTTGGTA
TTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGTCTATTGGCC
AGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTGAGTTCAAG
GACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAAAACCCAAAA
GCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTATATAATAA
AGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_006229298 ⟹ XP_006229360

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,916 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,198 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,891 (-)	NCBI
Rnor_5.0	1	115,354,111 - 115,378,284 (-)	NCBI

Sequence:

show sequence

TCCAGGTTTCCCGGCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTG
TCCGAGGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAA
TGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTA
TATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAA
AAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATC
TTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGC
TGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGT
GCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTAC
TAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTT
AAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATT
GTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATA
TAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTAT
AAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGC
CTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTT
CCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCT
TTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACA
ATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGC
CTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCT
TAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGA
AATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAA
GTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGAC
AATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATG
GTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATT
TTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAA
TGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAAT
ACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTC
AGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAA
AACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATG
TGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAA
CAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAA
TGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTT
GTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTT
TTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGC
CAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAA
AATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTT
TCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGG
GGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGT
AGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATA
CCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATC
TATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTC
ATTGAGAATGTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACACAAGCATTT
TATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGG
ACAGATGCCGTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGG
CTTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTG
TAAAATAAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTAT
GTTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAG
TGATCTTTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTC
TCAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAG
CCCCATAGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAG
GTTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCC
CCTCTCCCCCAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTT
TTATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAAT
GTTAAGTTCTACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATG
TACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTAT
TTCTCTAATCGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGA
AACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCAT
CAGAAAAATCCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATAC
AATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTG
GAATATTTAGCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAG
ACTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTA
AGCTTTCAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTA
AAAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTA
GCCCTCAGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGG
TGTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGA
ATCTGGAACTTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAG
ATTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCC
CTACCATGTTTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTA
ATTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGT
CTATTGGCCAGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTT
GAGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAA
AACCCAAAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATT
ATATAATAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_017589153 ⟹ XP_017444642

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,913 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,011 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,897 (-)	NCBI

Sequence:

show sequence

TCTGCGTCCAGGTTTCCCGGCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGA
AGGCTGTCCGAGGTAGGCTCCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCG
GATGCACGAACTTCCCGCGGGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTG
CCTGCGTGGGGGTCTGAGCGGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGC
CTGCGACGGCCCTAAGGGTGGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGA
TAGCATTTCCAAGAAAATGAGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTA
AACTTACATGGTCTCTCACTGAACCTGTGGCTGAGCTGGCAAGAAGCAAGCCTGAGCAGTCCTA
TTGTCTGCTTTCTCCCCTGTTCCTAGTGCCGCCGCCATTAGAGGAGGCTGAGGAAGGAAGGCCT
AATCGGGGATGCTGAAAGCTGGAAAAAAGTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGC
AGTTTCTCTGTTCGGTGATCAATGTCACTCACAGGAACTTAAGTAACTAACGAAATGAGCCTGG
GGCGTGGAAAATATGACTTTTATATTGGTCTTGGATTGGCTATGACCTCCAGCATTTTCATTGG
AGGGAGTTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCA
GGTCAAGGAGGCCATGCATATCTTAAGGAATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAG
CTGGTGAAGTGGCCAATTTTGCTGCATATGCATTTGCTCCGGCCACACTGGTGACTCCACTAGG
TGCACTCAGCGTCCTTGTAAGTGCCATTCTGTCTTCATACTTCCTAAATGAAAGACTTAATCTT
CATGGGAAAATTGGGTGTTTACTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAA
AGGAAGAGGAGATTGAGACCTTAAATGAAATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGT
CTTTGCAACATTTGTGGTCATTGTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGA
CAGACAAACATTCTTGTGTATATAACAATCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCG
TGAAGGGTTTGGGTATCACTATAAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCT
CGCCTGGATTCTGCTGCTTAGCCTTGTGGTCTGTGTGAGCACACAAATTAATTACCTAAACCGG
GCTCTGGACATTTTCAACACTTCCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAG
TTTTGACGTGTTCAGCTATTCTTTTTAAAGAATGGCAAGATATGCCTGTTGATGATGTCATTGG
GACCTTGAGTGGCTTCTTCACAATCATTGTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTC
AGTTTTAGTCTAGCAAGTCTGCCTGTAACTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATC
TTTCTAATATGTATGAAGTTCTTAATAATAATGAAGAAGACTTACCATGTGGGATTGAACACAC
TGGTGAAAATATCTCCCGTAGAAATGGAAATCTGACATCTTTTTAAGGATATGTTTGAAAAGTT
AACCTATAATTCTGTTATAAAAGTGATTTTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCC
TCAAATAATGTCCTCTAAAGACAATCTTTTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTA
CTTTTCTTATATTTAAACAATGGTAGCTCACTAAAATGACCTCAGTACATGGCTAATTTCTAAT
AACATATTATTGTAAAGGTATTTTACATTTTTATTCATACTCCAGAAATCTAAATGCACTAATG
ATAAATTTTAAGCCTATAAAAATGTTTTATTTTTTCCATCGGTGATGAACATTAAAATGTACAT
TTGTGATCCCCATTTCATCAATACCTCATCACACCAAGGCTTCTTGATTATAAAGATATGTGTG
TGATTCCAAGAAAATAAGTCTCAGGTGGTGATTTGTCACCCAAACACCTGGTTTCTCACACACA
TCTGCTGGCCTCCTTTTGGAAAAACCCACTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTG
ACTGGATCTGTGTCATCTTATGTGAGCTCTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGAT
TACATTGTCATTCAGCCCTTAACAACTCTGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTT
AGAAACTCATGCTTGCATAAAATGACAAGTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCA
AATGCTTAGATTTAAAATATTTGTAGAATACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCA
GAGTTTGAACTTTTTTTTTTTTTTTTTTTAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCA
AATAGGTACAAAAAGGTTAGGCCAATGTAAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCA
AAGTCATGTATTAGCTTAAAAAAATTCACCCTCTTCCATGCTACCCCCATTAACAGGAAGAACT
GAGGTTTGGGCCTGTGCCTGTTTCCTGTTTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGT
GAAGAATTTTATTTTGGAGTGGGGGTTAGCTTTGTTCTACTATTGGCACTCTTAAGGATACTTG
CCTTGTGGGCCATACTGGGTGTAGTCACAGTCCACAAATGTTGTAAAACTGAGCTACATTTCCA
GAATTCCTATGTAACTTAAATACCAGAGAGAACAGGTTTCCCCTGCACCCTCACCGATATACTT
TGTCTATTTTATGTACTGTATCTATGTCTTATTTTGCACATAAAAAATAGCCAATGTTCATTCC
CTTGGGGGTGAAAAGTTTCCTCATTGAGAATGTGCGTGTTGTATATACAACACTTTATATATAT
GTAATCTTGTACACAAGCATTTTATTTGGCCTATCACTTGGTAATATGGTTGTTAACTTTTAAA
ATCTACACTTCATAGGGTCAGGACAGATGCCGTTACAGCTATTCATATCAACAAAAAATATTTT
AGGTAACTTTTTGATAAATAGGCTTGTTTAAAATGTAACTCAGGTTTACAGTACAACCGAATAG
TACCTGTGTTTTATTTTCTGTGTAAAATAAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGC
CCAATGATGTTTCTCTATTTATGTTTGTTTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTG
TCCTTGAACTCCCAGCCTCCAGTGATCTTTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGT
GGCATATCACAGTACCAGATTCTCAATTTCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGG
TTCTTGTTTTTCACTGGGCAAGCCCCATAGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGT
ATGCTGTAGCTGTTAGGGTCAGGTTCCCTCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCC
ACTGTCCCATGTCATGCTGTCCCCTCTCCCCCAACTGTTGGCCTTAAAGAGTAGATGCACATAC
CATACAAGTTCTCATGTTCCTTTTATGGACAACGCAATTGTTGTATTACATCTCATGTTTCATT
TCATCCCTACCCAGACCTTAATGTTAAGTTCTACTTGTGTTTGAAAGATGCCATGATCTGAACA
CGTCCTGGGAAATGTGGGTATGTACAGGGACAGACTATCTTGCTCATGCCAATGAACAAACACA
AATAGATTCCATTGATTTTTATTTCTCTAATCGTTAAGTCATATCTCACGAATCAGACTCACAG
TTTGATTTACTTGAACAGGGGAAACAATTTCACTATATTGGCATAAAAGGGAACAATGACTTAG
AAAAGATTTCCTAAAAGGCCATCAGAAAAATCCCTAAACTAGTCATTAAATTTAAAGTAATTGG
TAGGGTTTTTTTTTTTAAATACAATTAGTTGGTATTATGCTCTTATAGGATAATGAGTGAATTT
TGCATTTTATAACTAGCTACTGGAATATTTAGCATGAAAATATTTGTTAAGACCATAATGGCAA
CAACTAGTAACCATATTCTCAGACTTCCCAATTCCAAAGGCATATACAATTTTAGTATAGAAAA
ATATGTAAGTTTTATAAAGTTAAGCTTTCAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAG
ACATAATGGAAAATAGCCCCTAAAAATTTCAATATAGTTTACATAAAGACAAACATGCCATCAG
TTACTGGGATCTGATGAGCTTAGCCCTCAGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGA
AGCAGCGTACATGTTCCACAGGTGTGCTCTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGAT
AGTGATGATCTCATCATTGAGAATCTGGAACTTGCGAATCCTCTCCACCATCTTCTTCAATGGC
TAAAATTAGATCAGACTGTTAGATTTATTGTACTTTAAAATTCAACAACTCTACTTCAGAAAAA
TTATAGAAAATTAAATTGACCCCTACCATGTTTCTAATACCATAGTTGGAGTAATGAATACATT
TCCAATTTAAATTCACCTTGTAATTTTGGTATTGCTAAGTATAGACCCTTAAAACTTGAAAACA
CATTCATTTGATTATCAGTTGTCTATTGGCCAGGAGAGGTGGCTTATGTCAATATTATACTACT
CAAGATAAAACAGGTTTACTTTGAGTTCAAGGACAGCCTGGACACATGGTAAGTTCCAGGTCAC
GCTGGATGACCCTTTCTTCCAAAACCCAAAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAAT
CTGGAATATTAACATATATATTATATAATAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_017589154 ⟹ XP_017444643

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,910 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,011 (-)	NCBI
Rnor_6.0	1	114,346,009 - 114,371,878 (-)	NCBI

Sequence:

show sequence

GCAGGTTCGCGGCGGCCCCGCTGGTGCTGGCCGCGGTGCGGCCGAAGGCTGTCCGAGGTAGGCT
CCTCTCGGCTCTCCTATGGAGAAGGCGGCGCTCACTGCAGTCCCGGATGCACGAACTTCCCGCG
GGACGTCGCCGGAGACGGTGGCTGTGTGCGCGCAGGAGCGAGCTGCCTGCGTGGGGGTCTGAGC
GGGCACTCGGGTCGCGTCCCGGAGGGAGCCGCGTCGCCCGCCGGCCTGCGACGGCCCTAAGGGT
GGAACTACTCTGCCATGGTTAAATACTTTAAATGGGAATAAAGGATAGCATTTCCAAGAAAATG
AGAATGAATAAATCATCTCTGTTTTTTAAAAGAAAGACCATATTAAACTTACATGAACTCCGTA
GAGTGGCATGGTGATGGTGGAGTAAAAGAGAGACGTGCTTGCATCAAAGGATGCAAAGTAACAA
GTTTGAAGACTGCATCATCCTGCCTCCAGTACAAGCAGTTTCTCTGTTCGGTGATCAATGTCAC
TCACAGGAACTTAAGTAACTAACGAAATGAGCCTGGGGCGTGGAAAATATGACTTTTATATTGG
TCTTGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGC
CTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGAGGCCATGCATATCTTAAGG
AATGGTTATGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAAGTGGCCAATTTTGCTGCATA
TGCATTTGCTCCGGCCACACTGGTGACTCCACTAGGTGCACTCAGCGTCCTTGTAAGTGCCATT
CTGTCTTCATACTTCCTAAATGAAAGACTTAATCTTCATGGGAAAATTGGGTGTTTACTAAGTA
TTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGATTGAGACCTTAAATGA
AATGTCACATAAGTTAGGTGACCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATTGTGGCC
TTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATATAACAA
TCTGCTCTGTGATTGGAGCATTTTCAGTCTCCTGCGTGAAGGGTTTGGGTATCACTATAAAAGA
GTTGTTGGCTGGAAAGCCTGTTCTGCAGCACCCCCTCGCCTGGATTCTGCTGCTTAGCCTTGTG
GTCTGTGTGAGCACACAAATTAATTACCTAAACCGGGCTCTGGACATTTTCAACACTTCCATTG
TGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACGTGTTCAGCTATTCTTTTTAA
AGAATGGCAAGATATGCCTGTTGATGATGTCATTGGGACCTTGAGTGGCTTCTTCACAATCATT
GTGGGGATATTTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCCTGTAA
CTTTTCGAAAAGATGAAAAGGCAGTGAATGGCAATCTTTCTAATATGTATGAAGTTCTTAATAA
TAATGAAGAAGACTTACCATGTGGGATTGAACACACTGGTGAAAATATCTCCCGTAGAAATGGA
AATCTGACATCTTTTTAAGGATATGTTTGAAAAGTTAACCTATAATTCTGTTATAAAAGTGATT
TTTGAGTGTCAGAATGTTATCTGAAAAAAATTGTCCTCAAATAATGTCCTCTAAAGACAATCTT
TTTTTTAAGTTTTCACTAATTTGGATCAAGAAATTACTTTTCTTATATTTAAACAATGGTAGCT
CACTAAAATGACCTCAGTACATGGCTAATTTCTAATAACATATTATTGTAAAGGTATTTTACAT
TTTTATTCATACTCCAGAAATCTAAATGCACTAATGATAAATTTTAAGCCTATAAAAATGTTTT
ATTTTTTCCATCGGTGATGAACATTAAAATGTACATTTGTGATCCCCATTTCATCAATACCTCA
TCACACCAAGGCTTCTTGATTATAAAGATATGTGTGTGATTCCAAGAAAATAAGTCTCAGGTGG
TGATTTGTCACCCAAACACCTGGTTTCTCACACACATCTGCTGGCCTCCTTTTGGAAAAACCCA
CTGTGCTATCAGTCAGTACTTGCTGCTTCTATAGTGACTGGATCTGTGTCATCTTATGTGAGCT
CTTGGACCTTTTAGTGTGTGTGTGTTCAGAATGGATTACATTGTCATTCAGCCCTTAACAACTC
TGGGATGTCAACAGAGACTTGTGGTTTCTTAAATTTAGAAACTCATGCTTGCATAAAATGACAA
GTTGGAACAAAGTTCTTTCTGAATATTCTGATTCCAAATGCTTAGATTTAAAATATTTGTAGAA
TACATCTCTTTGAACCAAGTGGTTTATTTTGCTTCAGAGTTTGAACTTTTTTTTTTTTTTTTTT
TAGAAACTGTGAAAAAAATGTTTATAGAAAAATGCAAATAGGTACAAAAAGGTTAGGCCAATGT
AAGGAACACTCTCCAGCTTCAGACCTGCCCACTTCAAAGTCATGTATTAGCTTAAAAAAATTCA
CCCTCTTCCATGCTACCCCCATTAACAGGAAGAACTGAGGTTTGGGCCTGTGCCTGTTTCCTGT
TTCCTCCCTACAGTTATATAGTGACTTAGCTTTTGTGAAGAATTTTATTTTGGAGTGGGGGTTA
GCTTTGTTCTACTATTGGCACTCTTAAGGATACTTGCCTTGTGGGCCATACTGGGTGTAGTCAC
AGTCCACAAATGTTGTAAAACTGAGCTACATTTCCAGAATTCCTATGTAACTTAAATACCAGAG
AGAACAGGTTTCCCCTGCACCCTCACCGATATACTTTGTCTATTTTATGTACTGTATCTATGTC
TTATTTTGCACATAAAAAATAGCCAATGTTCATTCCCTTGGGGGTGAAAAGTTTCCTCATTGAG
AATGTGCGTGTTGTATATACAACACTTTATATATATGTAATCTTGTACACAAGCATTTTATTTG
GCCTATCACTTGGTAATATGGTTGTTAACTTTTAAAATCTACACTTCATAGGGTCAGGACAGAT
GCCGTTACAGCTATTCATATCAACAAAAAATATTTTAGGTAACTTTTTGATAAATAGGCTTGTT
TAAAATGTAACTCAGGTTTACAGTACAACCGAATAGTACCTGTGTTTTATTTTCTGTGTAAAAT
AAAGCTCAAAGCTTTTGGATTTTGGTGTTTCCCAGCCCAATGATGTTTCTCTATTTATGTTTGT
TTTTAAGACAGGGATCTTACTATGTTCCTTAAGCTGTCCTTGAACTCCCAGCCTCCAGTGATCT
TTATTCCTCAGCTTCCCAAGTAGCTGGGACTTGAGTGGCATATCACAGTACCAGATTCTCAATT
TCTCTCCTCTTTCTCTACTTTTAGAGCAAAATTGGGTTCTTGTTTTTCACTGGGCAAGCCCCAT
AGTGAGATAATTCCCCTAGCAATGGAGAAGGTATGTATGCTGTAGCTGTTAGGGTCAGGTTCCC
TCTCCCCTGCCTCCCTGTCCCTTTTTTGCAGTGTCCACTGTCCCATGTCATGCTGTCCCCTCTC
CCCCAACTGTTGGCCTTAAAGAGTAGATGCACATACCATACAAGTTCTCATGTTCCTTTTATGG
ACAACGCAATTGTTGTATTACATCTCATGTTTCATTTCATCCCTACCCAGACCTTAATGTTAAG
TTCTACTTGTGTTTGAAAGATGCCATGATCTGAACACGTCCTGGGAAATGTGGGTATGTACAGG
GACAGACTATCTTGCTCATGCCAATGAACAAACACAAATAGATTCCATTGATTTTTATTTCTCT
AATCGTTAAGTCATATCTCACGAATCAGACTCACAGTTTGATTTACTTGAACAGGGGAAACAAT
TTCACTATATTGGCATAAAAGGGAACAATGACTTAGAAAAGATTTCCTAAAAGGCCATCAGAAA
AATCCCTAAACTAGTCATTAAATTTAAAGTAATTGGTAGGGTTTTTTTTTTTAAATACAATTAG
TTGGTATTATGCTCTTATAGGATAATGAGTGAATTTTGCATTTTATAACTAGCTACTGGAATAT
TTAGCATGAAAATATTTGTTAAGACCATAATGGCAACAACTAGTAACCATATTCTCAGACTTCC
CAATTCCAAAGGCATATACAATTTTAGTATAGAAAAATATGTAAGTTTTATAAAGTTAAGCTTT
CAGATCAAAAAGTACCCCCTTAATTATTAGGTTTAGACATAATGGAAAATAGCCCCTAAAAATT
TCAATATAGTTTACATAAAGACAAACATGCCATCAGTTACTGGGATCTGATGAGCTTAGCCCTC
AGCTGCTGGCTAGGGACTGGTGGATGGGTGGCTGGAAGCAGCGTACATGTTCCACAGGTGTGCT
CTCCCCATCTCCAGATTTCAAGTACTTGTCCAGGATAGTGATGATCTCATCATTGAGAATCTGG
AACTTGCGAATCCTCTCCACCATCTTCTTCAATGGCTAAAATTAGATCAGACTGTTAGATTTAT
TGTACTTTAAAATTCAACAACTCTACTTCAGAAAAATTATAGAAAATTAAATTGACCCCTACCA
TGTTTCTAATACCATAGTTGGAGTAATGAATACATTTCCAATTTAAATTCACCTTGTAATTTTG
GTATTGCTAAGTATAGACCCTTAAAACTTGAAAACACATTCATTTGATTATCAGTTGTCTATTG
GCCAGGAGAGGTGGCTTATGTCAATATTATACTACTCAAGATAAAACAGGTTTACTTTGAGTTC
AAGGACAGCCTGGACACATGGTAAGTTCCAGGTCACGCTGGATGACCCTTTCTTCCAAAACCCA
AAAGCAAACAAAGAAAAAGAACCTATGAGCCAAAATCTGGAATATTAACATATATATTATATAA
TAAAGTGTTCAGTATA

hide sequence

RefSeq Acc Id:

XM_039112506 ⟹ XP_038968434

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,913 (-)	NCBI
mRatBN7.2	1	106,799,979 - 106,824,011 (-)	NCBI

RefSeq Acc Id:

XM_063262371 ⟹ XP_063118441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,916 (-)	NCBI

RefSeq Acc Id:

XM_063262372 ⟹ XP_063118442

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,897 (-)	NCBI

RefSeq Acc Id:

XM_063262375 ⟹ XP_063118445

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,897 (-)	NCBI

RefSeq Acc Id:

XM_063262383 ⟹ XP_063118453

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	115,935,759 - 115,959,898 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100988	(Get FASTA)	NCBI Sequence Viewer
	XP_006229354	(Get FASTA)	NCBI Sequence Viewer
	XP_006229357	(Get FASTA)	NCBI Sequence Viewer
	XP_006229358	(Get FASTA)	NCBI Sequence Viewer
	XP_006229359	(Get FASTA)	NCBI Sequence Viewer
	XP_006229360	(Get FASTA)	NCBI Sequence Viewer
	XP_017444642	(Get FASTA)	NCBI Sequence Viewer
	XP_017444643	(Get FASTA)	NCBI Sequence Viewer
	XP_038968434	(Get FASTA)	NCBI Sequence Viewer
	XP_063118441	(Get FASTA)	NCBI Sequence Viewer
	XP_063118442	(Get FASTA)	NCBI Sequence Viewer
	XP_063118445	(Get FASTA)	NCBI Sequence Viewer
	XP_063118453	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL86457	(Get FASTA)	NCBI Sequence Viewer
	EDL86458	(Get FASTA)	NCBI Sequence Viewer
	EDL86459	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000018028
	ENSRNOP00000018028.3

RefSeq Acc Id:

NP_001100988 ⟸ NM_001107518

- UniProtKB:

D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLL
SMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI
HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS
VSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF
TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAV
NGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF

hide sequence

RefSeq Acc Id:	XP_006229357 ⟸ XM_006229295
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLL SMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS VSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAV NGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

RefSeq Acc Id:	XP_006229360 ⟸ XM_006229298
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLL SMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS VSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAV NGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

RefSeq Acc Id:	XP_006229359 ⟸ XM_006229297
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLL SMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS VSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAV NGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

RefSeq Acc Id:	XP_006229354 ⟸ XM_006229292
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLL SMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS VSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAV NGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

RefSeq Acc Id:	XP_006229358 ⟸ XM_006229296
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLL SMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS VSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAV NGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

RefSeq Acc Id:	XP_017444642 ⟸ XM_017589153
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLL SMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS VSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAV NGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

RefSeq Acc Id:	XP_017444643 ⟸ XM_017589154
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLL SMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI HAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS VSCVKGLGITIKELLAGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFF TTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAV NGNLSNMYEVLNNNEEDLPCGIEHTGENISRRNGNLTSF hide sequence

Ensembl Acc Id:

ENSRNOP00000018028 ⟸ ENSRNOT00000018028

RefSeq Acc Id:	XP_038968434 ⟸ XM_039112506
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUV1 (UniProtKB/TrEMBL), A6KD29 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118441 ⟸ XM_063262371
- Peptide Label:	isoform X1
- UniProtKB:	A6KD29 (UniProtKB/TrEMBL), D3ZUV1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118453 ⟸ XM_063262383
- Peptide Label:	isoform X1
- UniProtKB:	A6KD29 (UniProtKB/TrEMBL), D3ZUV1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118445 ⟸ XM_063262375
- Peptide Label:	isoform X1
- UniProtKB:	A6KD29 (UniProtKB/TrEMBL), D3ZUV1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118442 ⟸ XM_063262372
- Peptide Label:	isoform X1
- UniProtKB:	A6KD29 (UniProtKB/TrEMBL), D3ZUV1 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZUV1-F1-model_v2	AlphaFold	D3ZUV1	1-359	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13690085

Promoter ID:

EPDNEW_R609

Type:

initiation region

Name:

Nipa2_1

Description:

non imprinted in Prader-Willi/Angelman syndrome 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	114,371,876 - 114,371,936	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306051	AgrOrtholog
BioCyc Gene	G2FUF-59459	BioCyc
Ensembl Genes	ENSRNOG00000012690	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000018028	ENTREZGENE
	ENSRNOT00000018028.5	UniProtKB/TrEMBL
Gene3D-CATH	1.10.3730.20	UniProtKB/TrEMBL
InterPro	DUF803	UniProtKB/TrEMBL
KEGG Report	rno:308667	UniProtKB/TrEMBL
NCBI Gene	308667	ENTREZGENE
PANTHER	DUF803	UniProtKB/TrEMBL
	MAGNESIUM TRANSPORTER NIPA2	UniProtKB/TrEMBL
Pfam	DUF803	UniProtKB/TrEMBL
PhenoGen	Nipa2	PhenoGen
RatGTEx	ENSRNOG00000012690	RatGTEx
Superfamily-SCOP	Multidrug resistance efflux transporter EmrE	UniProtKB/TrEMBL
UniProt	A6KD29	ENTREZGENE, UniProtKB/TrEMBL
	D3ZUV1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-03-01	Nipa2	NIPA magnesium transporter 2	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-02-27	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	Nipa2_predicted	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Nipa2_predicted	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) (predicted)	RGD1306051_predicted	similar to hypothetical protein MGC5466 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1306051_predicted	similar to hypothetical protein MGC5466 (predicted)	LOC308667_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC308667_predicted	similar to hypothetical protein MGC5466 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar