Mag (myelin associated glycoprotein) - Rat Genome Database

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Gene: Mag (myelin associated glycoprotein) Ictidomys tridecemlineatus
Analyze
Symbol: Mag
Name: myelin associated glycoprotein
RGD ID: 12650389
Description: ENCODES a protein that exhibits ganglioside GT1b binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN axon regeneration (ortholog); cell adhesion (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH Acute Experimental Autoimmune Encephalomyelitis (ortholog); angiostrongyliasis (ortholog); Brain Injuries (ortholog); FOUND IN compact myelin (ortholog); membrane raft (ortholog); mesaxon (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: myelin-associated glycoprotein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mIctTri1.hap1 - mIctTri1.hap1 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap11517,653,034 - 17,667,977 (-)NCBImIctTri1.hap1
HiC_Itri_2NW_02440934910,640,975 - 10,656,139 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936570990,017 - 1,004,866 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936570989,743 - 1,004,820 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0



Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Mag
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap11517,653,034 - 17,667,977 (-)NCBImIctTri1.hap1
HiC_Itri_2NW_02440934910,640,975 - 10,656,139 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936570990,017 - 1,004,866 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936570989,743 - 1,004,820 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381935,292,161 - 35,313,807 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1935,291,647 - 35,316,932 (+)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh371935,783,064 - 35,804,710 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361940,474,878 - 40,496,547 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341940,474,877 - 40,496,547NCBI
Celera1932,496,476 - 32,518,142 (+)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1932,291,486 - 32,313,186 (+)NCBIHuRef
CHM1_11935,784,610 - 35,806,322 (+)NCBICHM1_1
T2T-CHM13v2.01937,836,825 - 37,858,521 (+)NCBIT2T-CHM13v2.0
Mag
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,598,600 - 30,614,347 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl730,598,464 - 30,614,474 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38730,899,175 - 30,914,922 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,899,176 - 30,914,873 (-)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv37731,684,202 - 31,699,851 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36730,607,943 - 30,623,592 (-)NCBIMGSCv36mm8
Celera725,483,485 - 25,499,089 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map719.26NCBI
Mag
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8195,275,728 - 95,291,133 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl195,275,635 - 95,291,060 (-)EnsemblGRCr8
mRatBN7.2186,148,227 - 86,163,726 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl186,148,228 - 86,163,656 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx191,568,489 - 91,583,766 (-)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01100,034,659 - 100,049,930 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0193,326,789 - 93,342,064 (-)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd193,891,713 - 93,907,021 (-)NCBI
Lyon_Normotensive199,032,169 - 99,047,492 (-)NCBI
Lyon_Hypertensive195,565,482 - 95,580,805 (-)NCBI
F344_StmMcwi194,021,973 - 94,037,251 (-)NCBI
Rnor_6.0189,345,325 - 89,360,905 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl189,345,429 - 89,360,733 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.0190,500,932 - 90,516,312 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4185,954,511 - 85,970,832 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera180,517,171 - 80,532,485 (-)NCBICelera
RGSC_v3.1186,032,629 - 86,048,943 (-)NCBI
Cytogenetic Map1q21NCBI
Mag
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554684,584,162 - 4,598,914 (+)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_0049554684,584,068 - 4,598,772 (+)NCBIChiLan1.0ChiLan1.0
MAG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22041,304,655 - 41,326,706 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11943,288,023 - 43,310,063 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01932,238,457 - 32,260,497 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11940,975,763 - 40,997,401 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1940,975,763 - 40,997,401 (+)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
MAG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11117,288,306 - 117,301,975 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1117,288,343 - 117,302,386 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1116,691,276 - 116,704,898 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01117,888,249 - 117,901,841 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1117,861,538 - 117,902,800 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11117,450,999 - 117,464,593 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01117,076,835 - 117,090,444 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01118,132,334 - 118,145,991 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
MAG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl644,794,204 - 44,809,926 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1644,794,197 - 44,809,933 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2640,214,125 - 40,221,021 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MAG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap1623,567,871 - 23,589,169 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_0236660737,998,988 - 8,036,095 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.1630,224,873 - 30,246,277 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl630,227,442 - 30,246,481 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Mag
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247948,237,005 - 8,251,933 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_0046247948,236,223 - 8,258,361 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl2826,724,241 - 26,739,601 (+)Ensembl
Mag
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12165,104,842 - 165,120,456 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSTOT00000009952   ⟹   ENSSTOP00000008930
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936570990,017 - 1,004,866 (-)Ensembl
RefSeq Acc Id: XM_078033128   ⟹   XP_077889254
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
mIctTri1.hap11517,653,034 - 17,666,908 (-)NCBI
RefSeq Acc Id: XM_078033129   ⟹   XP_077889255
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
mIctTri1.hap11517,653,034 - 17,667,977 (-)NCBI
RefSeq Acc Id: XM_078033130   ⟹   XP_077889256
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
mIctTri1.hap11517,653,034 - 17,666,806 (-)NCBI
RefSeq Acc Id: XM_078033131   ⟹   XP_077889257
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
mIctTri1.hap11517,653,416 - 17,666,908 (-)NCBI
RefSeq Acc Id: XM_078033133   ⟹   XP_077889259
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
mIctTri1.hap11517,653,560 - 17,666,908 (-)NCBI
RefSeq Acc Id: XM_078033134   ⟹   XP_077889260
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
mIctTri1.hap11517,653,034 - 17,666,918 (-)NCBI
Ensembl Acc Id: ENSSTOP00000008930   ⟸   ENSSTOT00000009952
RefSeq Acc Id: XP_077889255   ⟸   XM_078033129
- Peptide Label: isoform X1
RefSeq Acc Id: XP_077889260   ⟸   XM_078033134
- Peptide Label: isoform X3
RefSeq Acc Id: XP_077889254   ⟸   XM_078033128
- Peptide Label: isoform X1
RefSeq Acc Id: XP_077889256   ⟸   XM_078033130
- Peptide Label: isoform X1
RefSeq Acc Id: XP_077889257   ⟸   XM_078033131
- Peptide Label: isoform X2
RefSeq Acc Id: XP_077889259   ⟸   XM_078033133
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000009953 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000009952.3 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_fold UniProtKB/TrEMBL
NCBI Gene Mag ENTREZGENE
UniProt I3MEJ7_ICTTR UniProtKB/TrEMBL