AVPR1A (arginine vasopressin receptor 1A) - Rat Genome Database

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Gene: AVPR1A (arginine vasopressin receptor 1A) Canis lupus familiaris
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Symbol: AVPR1A
Name: arginine vasopressin receptor 1A
RGD ID: 12367864
Description: ENCODES a protein that exhibits peptide hormone binding (ortholog); V1A vasopressin receptor binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to water deprivation (ortholog); grooming behavior (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 1; ASSOCIATED WITH acute kidney failure (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endocytic vesicle (inferred); endosome (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: vasopressin V1a receptor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1106,266,217 - 6,269,662 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl106,265,998 - 6,269,662 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha106,196,083 - 6,199,528 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0106,304,782 - 6,308,218 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl106,304,563 - 6,308,218 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1106,244,666 - 6,248,110 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0106,496,014 - 6,499,452 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0106,633,959 - 6,637,404 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:23359662   PMID:30032202  


Genomics

Comparative Map Data
AVPR1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1106,266,217 - 6,269,662 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl106,265,998 - 6,269,662 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha106,196,083 - 6,199,528 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0106,304,782 - 6,308,218 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl106,304,563 - 6,308,218 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1106,244,666 - 6,248,110 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0106,496,014 - 6,499,452 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0106,633,959 - 6,637,404 (-)NCBIUU_Cfam_GSD_1.0
AVPR1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381263,142,759 - 63,151,201 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1263,142,759 - 63,151,201 (-)EnsemblGRCh38hg38GRCh38
GRCh371263,536,539 - 63,544,981 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361261,826,483 - 61,832,857 (-)NCBINCBI36Build 36hg18NCBI36
Build 341261,826,482 - 61,832,857NCBI
Celera1263,208,681 - 63,215,055 (-)NCBICelera
Cytogenetic Map12q14.2NCBI
HuRef1260,587,763 - 60,597,814 (-)NCBIHuRef
CHM1_11263,504,292 - 63,514,344 (-)NCBICHM1_1
T2T-CHM13v2.01263,121,411 - 63,352,402 (-)NCBIT2T-CHM13v2.0
Avpr1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910122,284,404 - 122,289,358 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10122,284,404 - 122,289,357 (+)EnsemblGRCm39 Ensembl
GRCm3810122,448,499 - 122,453,453 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10122,448,499 - 122,453,452 (+)EnsemblGRCm38mm10GRCm38
MGSCv3710121,885,555 - 121,890,509 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610121,851,559 - 121,856,513 (+)NCBIMGSCv36mm8
Celera10124,830,307 - 124,835,265 (+)NCBICelera
Cytogenetic Map10D2NCBI
cM Map1070.36NCBI
Avpr1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8759,999,743 - 60,003,667 (+)NCBIGRCr8
mRatBN7.2758,114,306 - 58,118,230 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl758,114,284 - 58,122,215 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx759,986,073 - 59,990,009 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0762,188,888 - 62,192,822 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0761,966,702 - 61,970,636 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0767,341,366 - 67,345,290 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl767,341,080 - 67,345,308 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0767,528,358 - 67,532,282 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4762,225,537 - 62,229,461 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1762,246,266 - 62,250,191 (+)NCBI
Celera755,286,966 - 55,290,890 (+)NCBICelera
Cytogenetic Map7q22NCBI
Avpr1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545810,245,111 - 10,253,209 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545810,245,325 - 10,253,209 (-)NCBIChiLan1.0ChiLan1.0
AVPR1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21031,199,135 - 31,210,510 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11231,195,907 - 31,207,282 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01225,793,633 - 25,803,026 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11226,065,882 - 26,075,972 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1226,065,882 - 26,075,972 (+)Ensemblpanpan1.1panPan2
Avpr1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494552,314,128 - 52,323,553 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365451,786,571 - 1,794,709 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365451,788,995 - 1,795,842 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AVPR1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl527,824,992 - 27,832,703 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1527,824,991 - 27,832,794 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2530,773,944 - 30,779,983 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AVPR1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11159,074,699 - 59,079,710 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1159,071,202 - 59,079,596 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037186,727,383 - 186,736,923 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Avpr1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248024,894,235 - 4,900,276 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248024,893,172 - 4,900,177 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AVPR1A
51 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 2
Low 4 5 10 4 4 6 4 5 8 5 6
Below cutoff 1 7 2 6 2 2 5 5

Sequence


RefSeq Acc Id: ENSCAFT00000000524   ⟹   ENSCAFP00000000475
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl106,265,998 - 6,269,662 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845017584   ⟹   ENSCAFP00845013688
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl106,304,563 - 6,308,218 (-)Ensembl
RefSeq Acc Id: NM_001198658   ⟹   NP_001185587
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1106,266,217 - 6,269,662 (-)NCBI
Dog10K_Boxer_Tasha106,196,083 - 6,199,528 (-)NCBI
ROS_Cfam_1.0106,304,782 - 6,308,218 (-)NCBI
UMICH_Zoey_3.1106,244,666 - 6,248,110 (-)NCBI
UNSW_CanFamBas_1.0106,496,014 - 6,499,452 (-)NCBI
UU_Cfam_GSD_1.0106,633,959 - 6,637,404 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001185587 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ADO79883 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000000475.4
  ENSCAFP00000071412.1
  ENSCAFP00030006230.1
  ENSCAFP00030006261.1
  ENSCAFP00040032333.1
  ENSCAFP00040032376.1
  ENSCAFP00845013688
  ENSCAFP00845013688.1
RefSeq Acc Id: NP_001185587   ⟸   NM_001198658
- UniProtKB: E2R8D3 (UniProtKB/TrEMBL),   A0A8C0T9H3 (UniProtKB/TrEMBL),   A0A8P0N3K6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000000475   ⟸   ENSCAFT00000000524
RefSeq Acc Id: ENSCAFP00845013688   ⟸   ENSCAFT00845017584

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000000339 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030003795 UniProtKB/TrEMBL
  ENSCAFG00040020029 UniProtKB/TrEMBL
  ENSCAFG00845009998 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000000524.5 UniProtKB/TrEMBL
  ENSCAFT00000107122.1 UniProtKB/TrEMBL
  ENSCAFT00030007107.1 UniProtKB/TrEMBL
  ENSCAFT00030007142.1 UniProtKB/TrEMBL
  ENSCAFT00040037116.1 UniProtKB/TrEMBL
  ENSCAFT00040037162.1 UniProtKB/TrEMBL
  ENSCAFT00845017584 ENTREZGENE
  ENSCAFT00845017584.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro DUF1856 UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Vasoprsn_rcpt UniProtKB/TrEMBL
  Vprs_V1A_rcpt UniProtKB/TrEMBL
KEGG Report cfa:481142 UniProtKB/TrEMBL
NCBI Gene AVPR1A ENTREZGENE
PANTHER NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  VASOPRESSIN V1A RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
  DUF1856 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  VASOPRESSINR UniProtKB/TrEMBL
  VASOPRSNV1AR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART DUF1856 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0MBT5_CANLF UniProtKB/TrEMBL
  A0A8C0RC38_CANLF UniProtKB/TrEMBL
  A0A8C0T7Q0_CANLF UniProtKB/TrEMBL
  A0A8C0T9H3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NEL6_CANLF UniProtKB/TrEMBL
  A0A8P0N3K6 ENTREZGENE
  E2R8D3 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A8P0N3K6 UniProtKB/TrEMBL
  A0A8P0TPU7 UniProtKB/TrEMBL
VGNC ID VGNC:38318 ENTREZGENE