Advanced Search (OLGA)

Gene: Avpr1a (arginine vasopressin receptor 1A) Ictidomys tridecemlineatus

Analyze

Symbol:

Avpr1a

Name:

arginine vasopressin receptor 1A

RGD ID:

12616657

Description:

ENCODES a protein that exhibits peptide hormone binding (ortholog); V1A vasopressin receptor binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to water deprivation (ortholog); grooming behavior (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 1; ASSOCIATED WITH acute kidney failure (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endocytic vesicle (inferred); endosome (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

vasopressin V1a receptor

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	52,314,128 - 52,323,553 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936545	1,786,571 - 1,794,709 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936545	1,788,995 - 1,795,842 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute kidney failure (ISO)

autism spectrum disorder (ISO)

autistic disorder (ISO)

brain edema (ISO)

Brain Injuries (ISO)

Cardiomegaly (ISO)

congenital adrenal hyperplasia (ISO)

Hemorrhage (ISO)

hypertension (ISO)

myocardial infarction (ISO)

portal hypertension (ISO)

renovascular hypertension (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium-mediated signaling (ISO)

cellular response to hormone stimulus (IEA)

cellular response to water deprivation (ISO)

G protein-coupled receptor signaling pathway (IEA)

grooming behavior (ISO)

maternal aggressive behavior (ISO)

maternal behavior (ISO)

myotube differentiation (ISO)

negative regulation of female receptivity (ISO)

negative regulation of transmission of nerve impulse (ISO)

positive regulation of blood pressure (ISO)

positive regulation of cell growth (ISO)

positive regulation of cell population proliferation (ISO)

positive regulation of cellular pH reduction (ISO)

positive regulation of cytosolic calcium ion concentration (ISO)

positive regulation of glutamate secretion (ISO)

positive regulation of heart rate (ISO)

positive regulation of prostaglandin biosynthetic process (ISO)

positive regulation of systemic arterial blood pressure (ISO)

positive regulation of vasoconstriction (IEA,ISO)

regulation of blood pressure (IEA)

regulation of systemic arterial blood pressure by vasopressin (IEA,ISO)

response to corticosterone (ISO)

social behavior (ISO)

sperm ejaculation (ISO)

telencephalon development (ISO)

Cellular Component

endocytic vesicle (IEA)

endosome (IEA)

membrane (IEA)

plasma membrane (IEA)

Molecular Function

G protein-coupled receptor activity (IEA)

peptide binding (IEA)

peptide hormone binding (ISO)

protein binding (ISO)

V1A vasopressin receptor binding (ISO)

vasopressin receptor activity (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

G protein mediated signaling pathway via Galphaq family (ISO)

vasopressin signaling pathway (ISO)

vasopressin signaling pathway via receptor type 1 (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Avpr1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	52,314,128 - 52,323,553 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936545	1,786,571 - 1,794,709 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936545	1,788,995 - 1,795,842 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AVPR1A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	63,142,759 - 63,151,201 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	63,142,759 - 63,151,201 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	63,536,539 - 63,544,981 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	61,826,483 - 61,832,857 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	61,826,482 - 61,832,857	NCBI
Celera	12	63,208,681 - 63,215,055 (-)	NCBI		Celera
Cytogenetic Map	12	q14.2	NCBI
HuRef	12	60,587,763 - 60,597,814 (-)	NCBI		HuRef
CHM1_1	12	63,504,292 - 63,514,344 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	63,121,411 - 63,352,402 (-)	NCBI		T2T-CHM13v2.0

Avpr1a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	122,284,404 - 122,289,358 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	122,284,404 - 122,289,357 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	122,448,499 - 122,453,453 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	122,448,499 - 122,453,452 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	121,885,555 - 121,890,509 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	121,851,559 - 121,856,513 (+)	NCBI		MGSCv36	mm8
Celera	10	124,830,307 - 124,835,265 (+)	NCBI		Celera
Cytogenetic Map	10	D2	NCBI
cM Map	10	70.36	NCBI

Avpr1a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	59,999,743 - 60,003,667 (+)	NCBI		GRCr8
mRatBN7.2	7	58,114,306 - 58,118,230 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	58,114,284 - 58,122,215 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	59,986,073 - 59,990,009 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	62,188,888 - 62,192,822 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	61,966,702 - 61,970,636 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	67,341,366 - 67,345,290 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	67,341,080 - 67,345,308 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	67,528,358 - 67,532,282 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	62,225,537 - 62,229,461 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	62,246,266 - 62,250,191 (+)	NCBI
Celera	7	55,286,966 - 55,290,890 (+)	NCBI		Celera
Cytogenetic Map	7	q22	NCBI

Avpr1a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	10,245,111 - 10,253,209 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955458	10,245,325 - 10,253,209 (-)	NCBI	ChiLan1.0	ChiLan1.0

AVPR1A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	31,199,135 - 31,210,510 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	31,195,907 - 31,207,282 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	25,793,633 - 25,803,026 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	26,065,882 - 26,075,972 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	26,065,882 - 26,075,972 (+)	Ensembl	panpan1.1		panPan2

AVPR1A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	6,266,217 - 6,269,662 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	6,265,998 - 6,269,662 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	6,196,083 - 6,199,528 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	6,304,782 - 6,308,218 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	6,304,563 - 6,308,218 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	6,244,666 - 6,248,110 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	6,496,014 - 6,499,452 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	6,633,959 - 6,637,404 (-)	NCBI		UU_Cfam_GSD_1.0

AVPR1A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	27,824,992 - 27,832,703 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	27,824,991 - 27,832,794 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	30,773,944 - 30,779,983 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AVPR1A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	59,074,699 - 59,079,710 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	59,071,202 - 59,079,596 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	186,727,383 - 186,736,923 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Avpr1a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624802	4,894,235 - 4,900,276 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624802	4,893,172 - 4,900,177 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005328685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000021435 ⟹ ENSSTOP00000015243

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936545	1,786,571 - 1,794,709 (-)	Ensembl

RefSeq Acc Id:

XM_005328685 ⟹ XP_005328742

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	52,314,128 - 52,323,553 (+)	NCBI
SpeTri2.0	NW_004936545	1,788,995 - 1,795,842 (-)	NCBI

Sequence:

show sequence

GCAGAGCCATAGTTGTCCAGAGTAACTAATAGAAGTAGGTGGTGTTTTCTGTCTTTTTCCCCAG
AGCATGTTTTCTGCTTTAAGATTCCTCTTTCTCACCCCGACAACGGAAGCCTGGAGGTTTTTCT
CTCCTCTGCCCTGGACAGCACTGCCAGGGTGGATGTTGATTGGCAGCTGTTCTTTTAGCCTTCA
GAAGAGACCAGAGAAGTCTGCAGGATCCAGTATTAAACAAATGAAGTCTCCATGGACTACTGCA
GCCCAATTTCCGCCATCCCCTCAGTGGGAATCCTGCTTTCCCAGAGAAACTCTCTGGAATCTAG
TTTAGAGAAAACTCCCTAGGCCCCTTGCCCTACACAGGATCTGGAAAATCAGAAGATGCTCCTT
TCCCTTCACTACTAATGACTGTGTCCTTCCCTCTGGCAAACCAATACAGTAACAGCGGGCACCA
AGTCCCATTGAGAAGAATGCATCCTTTAAGTCACAAGGTGGTTACCAGAGTGGAGTGGGGAGGC
GGGAGCAAAACTGCCTCGGGAATAAAATTAGCCAGACTAGCTGCGGAGGGATAAGATCAGTGAG
CCGAGAAATACTCCCACTGGAGGACGTGGGGTTTAGCGCCAAGTTCAGGTAGGTGCTTGAGCCA
GCGCGCGGTTGCATAGACCTGAGATTTCCCGGTACAGCGCTTACTCTCCTGCGGAAATCAAATG
TGGGTTTAAGGTGGCCGGTGAAAGAAGCTTGAGGAAACGGTGACGATCCTCTAAAAGGCAAGAT
CCCGTCCGGTTCTCCAAGTTTTGGAACGAGAGAGATCGCCTCGATTCCGCCTATTAAATCGAAG
GATCCTCGGGTCTCCCAGCCCCACCCCTGCAGCAATGATGCAAAGAGGACAAATCACCAACGAA
AGGAGGGAAGTTGGAGTGAGGCACGAACAGTCTCCAGCCACTAGGGCGAGAGGAAGCGCGTCCC
GCGGAATCAACCTCTGCATTAATCATTGAGTTCTGGGCTCAGCGCTTTCAGAAGCTCGGAGCGC
ACCTTTACAGCTTTACGAGAGTTGGGAAAAGGCAGAGCAGGGAGAGGGGCTGCAGCACCGCACC
CAGAGCTACTCAGTGGACAAGTGCTGGCGTGCGGGAGGTTTGAAGGGCCCCGCGAGCCCGGAGC
TTGGAAAGGACAGCGCCCTTGGGAAAAAAAGACCCCAAGTCCCCCGAGGTGAGAAAGGAGCTCC
CTGCGCTGCCCCGGGTCTCAAAAGCGCTGTACTAGATAGCATGCGTTTCTCCAGAGGCGCCGAC
GCGGGACCGCTGGGCAACTCCAGTTCGTGGTGGCCTCTGGCTGCCGATAGTGCCAACCAGAGCC
AGGAAGCAGATGCGCTTGGGGAAGGTGGTGGAAGTCCCCCGGGAGACCGGCGCAATGAGGAACT
GGCCAAGCTGGAGATCGCGGTGCTGGCGGTGACTTTCGTGGTGGCCGTGCTAGGCAACAGCAGC
GTGCTTCTGGCGCTACACCGCACACCGCGCAAGACGTCCCGCATGCACCTCTTCATCCGACACC
TCAGCCTGGCCGACCTCGCTGTCGCCTTCTTCCAGGTGTTACCGCAGCTGTGCTGGGACATAAC
CTACCGTTTCCGCGGACCCGACTGGCTGTGTCGCGTGGTGAAGCACCTGCAGGTGTTCGCCATG
TTCGCGTCGGCTTACATGCTGGTAGTAATGACCGCAGATCGCTACATTGCTGTGTGCCACCCGC
TCAAGACTCTGCAGCAGCCGGCGCGCCGCTCGCGCTTCATGATCGCCGCCTCTTGGGTACTGAG
CTTCGTGCTGAGCACCCCACAGTACTTCATCTTCTCCATGATCGAGGTGAACAATGTTACCAAA
GCTCAAGACTGCTGGGCCACTTTCATCCAACCCTGGGGCACCCGAGCCTATGTGACCTGGATGA
CAAGCGGCATCTTCGTGGCACCCGTGGTCATCTTAGGTACCTGCTACGGCTTCATCTGCTACCA
CATCTGGCGCAACATCCGCGGAAAGACCGCGTCGCGCCAGAGCAAGGGTGCAAGCGGCGCGGAG
GACGCCCTCCATAAGGGGATTCTGGTAGCGCCCTGTGTCAGCAGTGTGAAGACCATTTCCCGCG
CCAAGATTCGCACCGTAAAGATGACTTTTGTGATTGTGACGGCTTACATCCTCTGCTGGGCTCC
TTTCTTCATCATCCAGATGTGGTCGGTCTGGGATGAAAACTTCATCTGGACCGATTCAGAAAAC
CCTTCCACCACCATCACGGCTTTACTGGCTTCTTTGAATAGTTGCTGCAATCCCTGGATATATA
TGTTTTTTAGTGGCCATCTCCTGCAAGACTGTGTCCAGAGCTTTCCATGCTGCCACCACATGAA
GCAAAAATTCAACAAAGATACCGACAGTATGAGCAGAAGACAGACTTCTTATTCTAACAACCGA
AGCCCAACAAATAGTACCGGTACATGGAAGGACTCACCTAAATCTTCCAAGTCCATCAAATTTA
TTCCTGTTTCAACCTGAGCCCCAAGTTCATACTGCCTGGTTCTTGTAATTGACTTTTTGGTCCA
TTACTGAATCCATCTAGAAATCATGAGGACAAACAGGCTTATGTGAGATAAGCAAAAATCAACT
GGTCGGGTACAAGACTTTTGTTTCTAGTTGTATTTTACACATTGCTATGACTCAAAACCATGAA
TTATTTTATACAGAAAGTTAGTGAAAATACACCATACTAAAATCTGTGGGCCTGATTTCCAGAA
ATAACAGAAGTTATGTTTTTAAAGGACAAAACGTAACCAAACCGACTTCGTATTTTTACTATGG
GTTTCTTTTAATTTCTGACATAAGTAAGACTTGGTTGGTTTAAAAGTCATAGAATTTCTGAACA
AAGTGGGCTCATCATTTAGAGGAGACTTCAGAGAATCATGATTCCATTAAAAAAATCAATTTAT
ACATCATAAAATACAGCCCCAAATGGGATCCTGGAGATGAGGTCTTGGGGAGGTTTTGGGGCCA
GGGCTTATTGAGCAGGAGGTAGCCAGTTCTGAGTGAAAAGGAGAAAGTTCTGTTAGGAGCTATA
AATCACTCTTGAGTTTCAAAATGATAACTTGATAACTGGCAGTGCCTTCCTTTATTTTCCTCAC
CTTTTAATGGCTCTGAGAATCATTAATTACTAGGATGTTGACAGAGAAAAAATTGTGAACAAGC
TGAAAGTATCCTTTTCCTCCCGCTGTAAGATTGTTTTCAAGTTAGAATATGTATGAGGAATGCC
AAATTTCATAGCGGAGTAGAAAAGATTGCCTAAAGAAGGCTGTAGACTTTATCTAGAACGTTGT
TTGACAGTGTTATAAAGTGTCCTGTGCTACACTGATTATTAACCTGATGTTATCTTTATGTTTG
GTGAGTCTGGATCCATAAATATGAGTCTGCTAGAGAGTTACTCAGGATATAAAGTGCCTCCCAC
TATGTTTAATTACAAAGGTCTGTTCTTTCCTTCCAGTCTCCCACGCACCTAACAGTTTCTGAAT
AGAGAAGAGGTTAGGGGTGGGGGTAAAGGTTGGGATACAGATGGAAAGAGAACTAACTGCTCTA
CTCCTCATCTGTATTCCTTTATTATTAAATGTATGTTATCTAAAAACACATCAAGCCTCTGTCT
CCTTGGCTGTACAATGGCATTGATAACACCTCACAGGGTTGCTTTGAGAATTAAATGAAATCAA
ATGTGTGAAATAGCTTCACACCCTGTAAAATGCTATACTTATACTACAGGTGTTTTTTTTTTAA
TATTCTCGAGATATTAAGAATTTCATAGTTCTTTATTCCTGCTTATTTTTTTATTAACCAAAAT
TAGTTGGTTTTACATCTGGGATATAAAATCCTAAAATTTAAATATAGATCTGCTGATTCATTGG
AAGGCATTGCCAGCAGCCACTAAGCCAGACTTCTGCATGGCTAAAGTTTTCCGATGCAAGGATA
GAGCTTGCTTTCCTTTGAATGCAGGTAAAGCAAAGCCAGCCAAGAACATCAGTTTGGTTCAACT
CTAAGTAGAGATAAATTACAACACTCCTTGGCCATTGGTATTGCATTTTTCATTACTGTTTTTT
TTTTTTCTAGCTCTTTTGTCTGACTCCTTCTTAGAGATCGTGCACTGATTTGAGGTTACATTCA
TTAATAAATATTTTGCATCTCTTAGAAGATGTAATAGTTACTTTTAATAGTATTACTGGATTTC
TTTTTTTAACTTTGTAGATAAGAGACCATGGACTGGATGGCACTGCTGTAACCTGGCATGAACT
ACTTCACTCCTTTTCATTCTCCTATCTTTCTAAATTCTCAGCCCTTAGACTCCCTTCATTGATG
TGCTTAAAAAATGTATCCGAACAATGCATAAAATTATACTGTCGAGATTATCCCTTTAGAGTTC
TTTTTTTAAAAAATAACAAAGGGTTCTAGGGAGGTAGCTCATTGATGCAGCACTTATACAGCAT
GCATAATGCCCAGCTCAATCCCCAGC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005328742	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000015243.1
GenBank Protein	KAG3291461	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005328742 ⟸ XM_005328685

- UniProtKB:

I3MSZ8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRFSRGADAGPLGNSSSWWPLAADSANQSQEADALGEGGGSPPGDRRNEELAKLEIAVLAVTFV
VAVLGNSSVLLALHRTPRKTSRMHLFIRHLSLADLAVAFFQVLPQLCWDITYRFRGPDWLCRVV
KHLQVFAMFASAYMLVVMTADRYIAVCHPLKTLQQPARRSRFMIAASWVLSFVLSTPQYFIFSM
IEVNNVTKAQDCWATFIQPWGTRAYVTWMTSGIFVAPVVILGTCYGFICYHIWRNIRGKTASRQ
SKGASGAEDALHKGILVAPCVSSVKTISRAKIRTVKMTFVIVTAYILCWAPFFIIQMWSVWDEN
FIWTDSENPSTTITALLASLNSCCNPWIYMFFSGHLLQDCVQSFPCCHHMKQKFNKDTDSMSRR
QTSYSNNRSPTNSTGTWKDSPKSSKSIKFIPVST

hide sequence

Ensembl Acc Id:

ENSSTOP00000015243 ⟸ ENSSTOT00000021435

Protein Domains

G-protein coupled receptors family 1 profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000026613	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000021435.2	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	DUF1856	UniProtKB/TrEMBL
	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	Vasoprsn_rcpt	UniProtKB/TrEMBL
	Vprs_V1A_rcpt	UniProtKB/TrEMBL
NCBI Gene	Avpr1a	ENTREZGENE
PANTHER	NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	UniProtKB/TrEMBL
	VASOPRESSIN V1A RECEPTOR	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
	DUF1856	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	VASOPRESSINR	UniProtKB/TrEMBL
	VASOPRSNV1AR	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
SMART	DUF1856	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	I3MSZ8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

RGD Manual Annotations