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Gene: ACTN4 (actinin alpha 4) Pan paniscus

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Symbol:

ACTN4

Name:

actinin alpha 4

RGD ID:

12041327

Description:

ENCODES a protein that exhibits protein-containing complex binding (ortholog); structural constituent of cytoskeleton (ortholog); structural constituent of postsynaptic actin cytoskeleton (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); bicellular tight junction assembly (ortholog); gene expression (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell-cell junction (ortholog); cortical actin cytoskeleton (ortholog); cortical cytoskeleton (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

alpha-actinin-4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ACTN4 (actinin alpha 4)	NCBI	Ortholog
Mus musculus (house mouse):	Actn4 (actinin alpha 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Actn4 (actinin alpha 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Actn4 (actinin alpha 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ACTN4 (actinin alpha 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Actn4 (actinin alpha 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ACTN4 (actinin alpha 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ACTN4 (actinin alpha 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Actn4 (actinin alpha 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	44,939,775 - 45,022,391 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	46,810,115 - 46,892,741 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	35,742,758 - 35,825,321 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	44,313,569 - 44,395,508 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	44,313,569 - 44,395,508 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTN4	Bonobo	focal segmental glomerulosclerosis	susceptibility	ISO	ACTN4 (Homo sapiens)	9068941		RGD	PMID:10700177 and REF_RGD_ID:1598731

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTN4	Bonobo	chronic kidney disease		ISO	ACTN4 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chronic kidney disease	ClinVar	PMID:25741868
ACTN4	Bonobo	Coffin-Siris syndrome 2		ISO	ACTN4 (Homo sapiens)	8554872	ClinVar Annotator: match by term: COFFIN-SIRIS SYNDROME 2	ClinVar	PMID:16251236 more ...
ACTN4	Bonobo	focal segmental glomerulosclerosis		ISO	ACTN4 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16251236 more ...
ACTN4	Bonobo	focal segmental glomerulosclerosis 1		ISO	ACTN4 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10700177 more ...
ACTN4	Bonobo	genetic disease		ISO	ACTN4 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
ACTN4	Bonobo	kidney disease		ISO	ACTN4 (Homo sapiens)	8554872	ClinVar Annotator: match by term: renal disease	ClinVar	PMID:19142020 more ...
ACTN4	Bonobo	maturity-onset diabetes of the young type 1		ISO	ACTN4 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Type 2 diabetes mellitus	ClinVar	PMID:28492532
ACTN4	Bonobo	nephrotic syndrome		ISO	ACTN4 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Nephrotic syndrome	ClinVar	PMID:28492532
ACTN4	Bonobo	type 2 diabetes mellitus		ISO	ACTN4 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Type 2 diabetes mellitus	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTN4	Bonobo	Animal Mammary Neoplasms		ISO	ACTN4 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:12376462
ACTN4	Bonobo	carcinoma		ISO	ACTN4 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:12376462
ACTN4	Bonobo	Chemical and Drug Induced Liver Injury		ISO	ACTN4 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:25231249
ACTN4	Bonobo	Experimental Mammary Neoplasms		ISO	ACTN4 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:12376462

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTN4	Bonobo	focal segmental glomerulosclerosis 1		ISO	ACTN4 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTN4	Bonobo	actin filament bundle assembly	involved_in	ISO	Actn4 (Mus musculus)	9068941	PMID:15841212	UniProt	PMID:15841212
ACTN4	Bonobo	bicellular tight junction assembly	involved_in	ISO	Actn4 (Mus musculus)	9068941	PMID:18332111	UniProt	PMID:18332111
ACTN4	Bonobo	gene expression	acts_upstream_of_or_within	ISO	Actn4 (Mus musculus)	9068941	PMID:16501493	MGI	PMID:16501493
ACTN4	Bonobo	glomerulus development	involved_in	ISO	Actn4 (Mus musculus)	9068941	PMID:12782671	UniProt	PMID:12782671
ACTN4	Bonobo	negative regulation of substrate adhesion-dependent cell spreading	involved_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	peroxisome proliferator activated receptor signaling pathway	involved_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	podocyte cell migration	involved_in	ISO	Actn4 (Mus musculus)	9068941	PMID:16837921	UniProt	PMID:16837921
ACTN4	Bonobo	positive regulation of cell migration	involved_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	positive regulation of non-canonical NF-kappaB signal transduction	involved_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	positive regulation of pinocytosis	involved_in	ISO	Actn4 (Mus musculus)	9068941	PMID:10954430	UniProt	PMID:10954430
ACTN4	Bonobo	positive regulation of transcription by RNA polymerase II	involved_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	protein localization to bicellular tight junction	involved_in	ISO	Actn4 (Mus musculus)	9068941	PMID:18332111	UniProt	PMID:18332111
ACTN4	Bonobo	regulation of apoptotic process		ISO	Actn4 (Rattus norvegicus)	9068941		RGD	PMID:16014575 and REF_RGD_ID:1598732
ACTN4	Bonobo	response to hypoxia		ISO	Actn4 (Rattus norvegicus)	9068941		RGD	PMID:15942958 and REF_RGD_ID:1598733
ACTN4	Bonobo	retinoic acid receptor signaling pathway	involved_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	tumor necrosis factor-mediated signaling pathway	involved_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	vesicle transport along actin filament	involved_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTN4	Bonobo	actin cytoskeleton	located_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	actin cytoskeleton	located_in	IEA	ARBA:ARBA00029230	150520179		UniProt	GO_REF:0000117
ACTN4	Bonobo	cell-cell junction	located_in	ISO	Actn4 (Mus musculus)	9068941	PMID:18332111	UniProt	PMID:18332111
ACTN4	Bonobo	cortical actin cytoskeleton	located_in	ISO	Actn4 (Mus musculus)	9068941	PMID:16837921	UniProt	PMID:16837921
ACTN4	Bonobo	cortical cytoskeleton	located_in	ISO	Actn4 (Mus musculus)	9068941	PMID:12960352	MGI	PMID:12960352
ACTN4	Bonobo	cytoplasm	located_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	cytoplasm	located_in	IEA	ARBA:ARBA00026971	150520179		UniProt	GO_REF:0000117
ACTN4	Bonobo	focal adhesion	located_in	ISO	Actn4 (Mus musculus)	9068941	PMID:16837921	UniProt	PMID:16837921
ACTN4	Bonobo	glutamatergic synapse	is_active_in	ISO	Actn4 (Rattus norvegicus)	9068941	PMID:25944910	SynGO	PMID:25944910 and REF_RGD_ID:405650279
ACTN4	Bonobo	neuron projection	located_in	ISO	Actn4 (Rattus norvegicus)	9068941	PMID:20008558	UniProt	PMID:20008558 and REF_RGD_ID:8553724
ACTN4	Bonobo	nucleus	located_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	perinuclear region of cytoplasm	located_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	postsynaptic actin cytoskeleton	is_active_in	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	protein-containing complex		ISO	Actn4 (Rattus norvegicus)	9068941		RGD	PMID:15331416 more ...
ACTN4	Bonobo	protein-containing complex	part_of	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	pseudopodium	located_in	ISO	Actn4 (Mus musculus)	9068941	PMID:15633123	UniProt	PMID:15633123
ACTN4	Bonobo	ribonucleoprotein complex	part_of	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	stress fiber	located_in	ISO	Actn4 (Mus musculus)	9068941	PMID:15841212 and PMID:23890175	UniProt	PMID:15841212 and PMID:23890175
ACTN4	Bonobo	stress fiber	located_in	ISO	Actn4 (Rattus norvegicus)	9068941		RGD	PMID:15505042 and REF_RGD_ID:1359754
ACTN4	Bonobo	Z disc	located_in	ISO	Actn4 (Mus musculus)	9068941	PMID:20215401 and PMID:20368620	MGI	PMID:20215401 and PMID:20368620

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTN4	Bonobo	actin binding	enables	IEA	UniProtKB-KW:KW-0009	150520179		UniProt	GO_REF:0000043
ACTN4	Bonobo	actin filament binding	enables	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	calcium ion binding	enables	IEA	InterPro:IPR002048	150520179		InterPro	GO_REF:0000002
ACTN4	Bonobo	chromatin DNA binding	enables	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	metal ion binding	enables	IEA	UniProtKB-KW:KW-0479	150520179		UniProt	GO_REF:0000043
ACTN4	Bonobo	nuclear receptor binding	enables	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	nuclear retinoic acid receptor binding	enables	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	nucleoside binding	enables	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P46940	9068941	PMID:22662192 and PMID:26496610	IntAct	PMID:22662192 and PMID:26496610
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:Q3TN34	9068941	PMID:18332111 and PMID:23890175	UniProt	PMID:18332111 and PMID:23890175
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:Q6ZU15	9068941	PMID:33228246	UniProt	PMID:33228246
ACTN4	Bonobo	protein binding	enables	ISO	PR:E9Q9D5	9068941	PMID:23055941	MGI	PMID:23055941
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:Q8K4E0	9068941	PMID:22693585	IntAct	PMID:22693585
ACTN4	Bonobo	protein binding	enables	ISO	PR:Q8K4E0	9068941	PMID:22693585	MGI	PMID:22693585
ACTN4	Bonobo	protein binding	enables	ISO	PR:P29477	9068941	PMID:12960352	MGI	PMID:12960352
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P36406 and UniProtKB:Q9NPC6	9068941	PMID:26871637	IntAct	PMID:26871637
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:A8K571 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:O60294 more ...	9068941	PMID:25910212	IntAct	PMID:25910212
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:Q8N3V7-1 and UniProtKB:Q8N3V7-3	9068941	PMID:15841212	UniProt	PMID:15841212
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P03466 and UniProtKB:Q5L4H4	9068941	PMID:24802111	IntAct	PMID:24802111
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:O00151 and UniProtKB:Q9NPC6	9068941	PMID:16189514	IntAct	PMID:16189514
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P19838 and UniProtKB:Q04206	9068941	PMID:25411248	UniProt	PMID:25411248
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:Q08043 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:Q9NPC6	9068941	PMID:19447967	IntAct	PMID:19447967
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P18206	9068941	PMID:15988023	UniProt	PMID:15988023
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P10276	9068941	PMID:22351778	IntAct	PMID:22351778
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P35222	9068941	PMID:16204054 and PMID:25241761	IntAct	PMID:16204054 and PMID:25241761
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P39447	9068941	PMID:16944923	IntAct	PMID:16944923
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:O00151	9068941	PMID:10753915 more ...	IntAct	PMID:10753915 more ...
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P19357	9068941	PMID:16396496	IntAct	PMID:16396496 and REF_RGD_ID:8553682
ACTN4	Bonobo	protein binding		ISO	Hnrnpk (Rattus norvegicus)	9068941		RGD	PMID:16518874 and REF_RGD_ID:10054427
ACTN4	Bonobo	protein binding		ISO	Pdlim2 (Rattus norvegicus)	9068941		RGD	PMID:15505042 and REF_RGD_ID:1359754
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:P37231	9068941	PMID:22351778	UniProt	PMID:22351778
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:Q8IVG9	9068941	PMID:15619032	UniProt	PMID:15619032
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:Q07157	9068941	PMID:16944923	IntAct	PMID:16944923
ACTN4	Bonobo	protein binding		ISO	Lmo7 (Rattus norvegicus)	9068941		RGD	PMID:15140894 and REF_RGD_ID:1303994
ACTN4	Bonobo	protein binding	enables	ISO	UniProtKB:Q04207	9068941	PMID:25411248	UniProt	PMID:25411248
ACTN4	Bonobo	protein homodimerization activity	enables	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	protein-containing complex binding		ISO	Nphs1 (Rattus norvegicus)	9068941		RGD	PMID:15331416 and REF_RGD_ID:1600864
ACTN4	Bonobo	RNA polymerase II transcription regulatory region sequence-specific DNA binding	enables	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	structural constituent of cytoskeleton	enables	ISO	Actn4 (Mus musculus)	9068941	PMID:12782671 and PMID:16837921	UniProt	PMID:12782671 and PMID:16837921
ACTN4	Bonobo	structural constituent of postsynaptic actin cytoskeleton	enables	ISO	Actn4 (Rattus norvegicus)	9068941	PMID:25944910	SynGO	PMID:25944910 and REF_RGD_ID:405650279
ACTN4	Bonobo	transcription coactivator activity	enables	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	transmembrane transporter binding	enables	IEA	UniProtKB:O43707 and ensembl:ENSP00000252699	150520179		Ensembl	GO_REF:0000107
ACTN4	Bonobo	ubiquitin protein ligase binding		ISO	Trim3 (Rattus norvegicus)	9068941	protein N-terminus binding	RGD	PMID:10673389 and REF_RGD_ID:61532

Imported Annotations - PID (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTN4	Bonobo	platelet-derived growth factor signaling pathway		ISO	ACTN4 (Homo sapiens)	9068941		PID	PID:200149

PMID:22301074	PMID:30032202

ACTN4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	44,939,775 - 45,022,391 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	46,810,115 - 46,892,741 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	35,742,758 - 35,825,321 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	44,313,569 - 44,395,508 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	44,313,569 - 44,395,508 (+)	Ensembl	panpan1.1		panPan2

ACTN4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	38,647,649 - 38,731,589 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	38,647,649 - 38,731,589 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	39,138,289 - 39,222,229 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	43,830,167 - 43,913,010 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	43,830,166 - 43,913,010	NCBI
Celera	19	35,940,352 - 36,023,163 (+)	NCBI		Celera
Cytogenetic Map	19	q13.2	NCBI
HuRef	19	35,584,836 - 35,667,954 (+)	NCBI		HuRef
CHM1_1	19	39,139,090 - 39,221,979 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	41,451,629 - 41,535,643 (+)	NCBI		T2T-CHM13v2.0

Actn4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	28,592,673 - 28,661,799 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	28,592,673 - 28,661,765 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	28,893,248 - 28,962,351 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	28,893,248 - 28,962,340 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	29,678,273 - 29,747,299 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	28,602,014 - 28,671,040 (-)	NCBI		MGSCv36	mm8
Celera	7	23,454,694 - 23,523,720 (-)	NCBI		Celera
Cytogenetic Map	7	B1	NCBI
cM Map	7	16.94	NCBI

Actn4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	93,310,294 - 93,379,369 (-)	NCBI		GRCr8
mRatBN7.2	1	84,182,783 - 84,251,867 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	84,182,788 - 84,251,847 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	89,592,702 - 89,661,646 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	98,051,807 - 98,120,960 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	91,348,565 - 91,417,509 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	87,078,012 - 87,147,347 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	87,078,020 - 87,147,333 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	88,258,630 - 88,327,965 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	84,000,723 - 84,073,767 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	84,079,711 - 84,151,876 (-)	NCBI
Celera	1	78,572,890 - 78,641,919 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

Actn4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	770,573 - 842,209 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955468	770,573 - 841,859 (-)	NCBI	ChiLan1.0	ChiLan1.0

ACTN4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	114,354,993 - 114,427,997 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	114,309,693 - 114,427,991 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	113,759,618 - 113,832,649 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	114,956,867 - 115,029,926 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	114,912,152 - 115,030,195 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	114,530,067 - 114,602,907 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	114,147,609 - 114,220,650 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	115,186,154 - 115,259,191 (-)	NCBI		UU_Cfam_GSD_1.0

Actn4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	13,167,758 - 13,237,529 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936801	1,333,077 - 1,404,054 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936801	1,333,077 - 1,402,885 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACTN4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	47,493,919 - 47,565,998 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	47,493,834 - 47,565,999 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	43,045,503 - 43,126,155 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ACTN4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	33,290,639 - 33,373,059 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	33,290,622 - 33,374,693 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	11,240,578 - 11,323,802 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Actn4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624794	12,042,533 - 12,113,886 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624794	12,042,627 - 12,113,762 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_008964667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008964668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034945703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034945704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063599570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000058509 ⟹ ENSPPAP00000035620

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	19	44,313,569 - 44,395,508 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000058571 ⟹ ENSPPAP00000035684

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	19	44,313,595 - 44,394,862 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000058576 ⟹ ENSPPAP00000035687

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	19	44,313,595 - 44,394,862 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000058588 ⟹ ENSPPAP00000035699

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	19	44,313,595 - 44,394,862 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000058591 ⟹ ENSPPAP00000035702

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	19	44,313,595 - 44,394,862 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000058607 ⟹ ENSPPAP00000035718

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	19	44,313,595 - 44,394,862 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000058615 ⟹ ENSPPAP00000035726

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	19	44,362,555 - 44,394,862 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000058652 ⟹ ENSPPAP00000035763

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	19	44,366,091 - 44,394,862 (+)	Ensembl

RefSeq Acc Id:

XM_008964667 ⟹ XP_008962915

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	20	44,939,775 - 45,022,391 (+)	NCBI
NHGRI_mPanPan1	19	46,810,160 - 46,892,741 (+)	NCBI
Mhudiblu_PPA_v0	19	35,742,758 - 35,825,315 (+)	NCBI
PanPan1.1	19	44,313,569 - 44,395,508 (+)	NCBI

Sequence:

show sequence

CTGGTGGGCGAGCGAGAGGCGGCGGAATGGTGGACTACCACGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCGCTGGCGGCGGGGGCAGCATGGGCGACTACATGGCCCAG
GAGGACGACTGGGACCGGGACCTGCTGCTGGACCCGGCCTGGGAGAAGCAGCAGCGCAAGACCTTCACGGCGTGGTGCAACTCCCACCTGCGGAAGGCAGGCACACAGATCGAGAACATTGATGAGGA
CTTCCGAGACGGGCTCAAGCTCATGCTGCTCCTGGAGGTCATATCAGGGGAGCGGTTACCTAAGCCGGAGCGGGGGAAGATGAGAGTGCACAAAATCAACAATGTGAACAAAGCGCTGGACTTTATTG
CCAGCAAAGGTGTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGGCAACGCAAAGATGACCCTGGGAATGATCTGGACCATCATCCTTAGGTTCGCCATCCAGGACATCTCCGTGGAAGAG
ACCTCGGCCAAGGAAGGGCTCCTTCTCTGGTGCCAGAGAAAAACAGCCCCGTATAAGAATGTCAATGTGCAGAACTTCCACATCAGCTGGAAGGATGGTCTTGCCTTCAATGCCCTGATCCACCGGCA
CAGACCAGAGCTGATTGAGTATGACAAGCTGAGGAAGGACGACCCTGTCACCAACCTGAACAATGCCTTCGAAGTGGCTGAGAAATACCTCGACATCCCCAAGATGCTGGATGCAGAGGACATCGTGA
ACACGGCCCGGCCCGACGAGAAGGCCATAATGACCTATGTGTCCAGCTTCTACCATGCCTTTTCAGGAGCGCAGAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGTGCTGGCTGTCAACCAAGAG
AACGAGCACCTGATGGAGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGTGGATCCGGCGCACCATCCCCTGGCTGGAGGACCGTGTGCCCCAAAAGACTATCCAGGAGATGCAGCAGAAGCTGGA
GGACTTCCGCGACTACCGGCGTGTGCACAAGCCGCCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGCCTCAGCAACCGGCCCGCCTTCATGCCCTCCG
AGGGCAAGATGGTCTCGGACATCAACAATGGCTGGCAGCACTTGGAGCAGGCTGAGAAGGGCTACGAGGAGTGGCTGCTGAATGAGATCCGCAGGCTGGAGCGGCTCGACCACCTGGCAGAGAAGTTC
CGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGGGAAGGAAGCCATGCTGAAGCACCGGGACTACGAGACGGCCACACTATCGGACATCAAAGCCCTCATTCGCAAGCACGAGGCCTTCGAGAG
CGACCTGGCTGCGCACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCCCAGGAGCTCAACGAGCTGGATTACTACGACTCCCACAATGTCAACACCCGGTGCCAGAAGATCTGTGACCAGTGGGACG
CCCTCGGTTCTCTGACACATAGTCGCAGGGAAGCCCTGGAGAAAACAGAGAAGCAGCTGGAGGCCATCGACCAGCTGCACCTGGAATACGCCAAGCGCGCGGCCCCCTTCAACAACTGGATGGAGAGC
GCCATGGAGGACCTCCAGGACATGTTCATCGTCCATACCATCGAGGAGATTGAGGGCCTGATCTCAGCCCATGACCAGTTCAAGTCCACCCTGCCGGACGCCGATAGGGAGCGCGAGGCCATCCTGGC
CATCCACAAGGAGGCCCAGAGGATCGCTGAGAGCAACCACATCAAGCTGTCGGGCAGCAACCCCTACACCACCGTCACCCCGCAGATCATCAACTCCAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAA
AACGGGACCACGCCCTCCTGGAGGAGCAGAGCAAGCAGCAGTCCAACGAGCACCTGCGCCGCCAGTTCGCCAGCCAGGCCAACGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGCGC
ATCTCCATTGAGATGAACGGGACCCTGGAGGACCAGCTGAGCCACCTGAAGCAGTATGAACGCAGCATCGTGGACTACAAGCCCAACCTGGACCTGCTGGAGCAGCAGCACCAGCTCATCCAGGAGGC
CCTCATCTTCGACAACAAGCACACCAACTATACCATGGAGCACATTCGCGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCCGCACCATCAACGAGGTGGAGAACCAGATCCTCACCCGCGACGCCA
AGGGTATCAGCCAGGAGCAGATGCAGGAGTTCCGGGCGTCCTTCAACCACTTCGACAAGAAGCAGACAGGCAGCATGGACTCCGATGACTTCAGGGCTCTGCTTATCTCCACAGGATACAGCCTGGGT
GAGGCCGAGTTCAACCGCATCATGAGCCTGGTCGACCCCAACCATAGCGGCCTTGTGACCTTCCAAGCCTTCATCGACTTCATGTCGCGGGAGACCACCGACACGGACACGGCCGACCAGGTCATCGC
TTCCTTCAAGGTCCTGGCAGGGGACAAGAACTTCATCACAGCTGAGGAGCTGCGGAGAGAGCTGCCCCCCGACCAGGCTGAGTACTGCATCGCCCGCATGGCGCCATACCAGGGCCCTGATGCCGTGC
CCGGCGCCCTCGACTACAAGTCCTTCTCCACGGCCTTGTATGGCGAGAGCGACCTGTGAGGCCCCAGAGAGACCCGACCCAACACCCCCCATGGCCTCCAGGAGGGGCCTGGGCAGCCCCACAGTCCC
GTTCCTCCACTCTGTATCTATGCAAAGCACTCTCTGCAGTCCTCTGGGGTGGGTGGGTGGGCAGGGAGGGGCTGGGGCAGGCTCTCTCCTCTCTCTCTTTGTGGGTTGGCCAGGAGGTTCCCCCGACC
AGGTTGGGGAGACTTGGGGCCAGCGCTTCTGGTCTGGTAAATATGTATGATGTGTTGTGCTTTTTTAACCAAGGAGGGGCCAGTGGATTCCCACAGCACAACCGGTCCCTTCCATGCCCTGGGGATGC
CTCACCACACCCAGGTCTCTTCCTTTGCTCCCAGGTCCCTTCAAGGCCTCCCCAATCCAGGCCAAAGCCCCATGTGCCTTGTCCAGGAACTGCCTGGGCCATGCGAGGGGCCAGCAGAGGGCGCCACC
GCCACCTGACGGCTGGGGACCCACCCAGCCCCCTCTCTGCTCCAGACTCACTTGCCATTGCCAGGAGATGGCCCCAATAAGCACCCCGCTTTTGCAGCAGAGGAGCTGAGTTGGCAGACCGGGCCCCC
CTGAACCGCACCCCATCCCACCAGCCCCGGCCTTGCTTTGTCTGGCCTCACGTGTCTCAGATTTT

hide sequence

RefSeq Acc Id:

XM_008964668 ⟹ XP_008962916

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	20	44,939,830 - 45,022,391 (+)	NCBI
NHGRI_mPanPan1	19	46,810,152 - 46,892,741 (+)	NCBI
Mhudiblu_PPA_v0	19	35,742,758 - 35,825,321 (+)	NCBI
PanPan1.1	19	44,313,569 - 44,395,508 (+)	NCBI

Sequence:

show sequence

CTGGTGGGCGAGCGAGAGGCGGCGGAATGGTGGACTACCACGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCGCTGGCGGCGGGGGCAGCATGGGCGACTACATGGCCCAG
GAGGACGACTGGGACCGGGACCTGCTGCTGGACCCGGCCTGGGAGAAGCAGCAGCGCAAGACCTTCACGGCGTGGTGCAACTCCCACCTGCGGAAGGCAGGCACACAGATCGAGAACATTGATGAGGA
CTTCCGAGACGGGCTCAAGCTCATGCTGCTCCTGGAGGTCATATCAGGGGAGCGGTTACCTAAGCCGGAGCGGGGGAAGATGAGAGTGCACAAAATCAACAATGTGAACAAAGCGCTGGACTTTATTG
CCAGCAAAGGTGTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGGCAACGCAAAGATGACCCTGGGAATGATCTGGACCATCATCCTTAGGTTCGCCATCCAGGACATCTCCGTGGAAGAG
ACCTCGGCCAAGGAAGGGCTCCTTCTCTGGTGCCAGAGAAAAACAGCCCCGTATAAGAATGTCAATGTGCAGAACTTCCACATCAGCTGGAAGGATGGTCTTGCCTTCAATGCCCTGATCCACCGGCA
CAGACCAGAGCTGATTGAGTATGACAAGCTGAGGAAGGACGACCCTGTCACCAACCTGAACAATGCCTTCGAAGTGGCTGAGAAATACCTCGACATCCCCAAGATGCTGGATGCAGAGGATATTGTGG
GCACTCTGAGGCCAGATGAGAAGGCCATCATGACTTACGTGTCCTGCTTCTACCACGCTTTCTCGGGGGCTCAGAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGTGCTGGCTGTCAACCAAGAG
AACGAGCACCTGATGGAGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGTGGATCCGGCGCACCATCCCCTGGCTGGAGGACCGTGTGCCCCAAAAGACTATCCAGGAGATGCAGCAGAAGCTGGA
GGACTTCCGCGACTACCGGCGTGTGCACAAGCCGCCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGCCTCAGCAACCGGCCCGCCTTCATGCCCTCCG
AGGGCAAGATGGTCTCGGACATCAACAATGGCTGGCAGCACTTGGAGCAGGCTGAGAAGGGCTACGAGGAGTGGCTGCTGAATGAGATCCGCAGGCTGGAGCGGCTCGACCACCTGGCAGAGAAGTTC
CGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGGGAAGGAAGCCATGCTGAAGCACCGGGACTACGAGACGGCCACACTATCGGACATCAAAGCCCTCATTCGCAAGCACGAGGCCTTCGAGAG
CGACCTGGCTGCGCACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCCCAGGAGCTCAACGAGCTGGATTACTACGACTCCCACAATGTCAACACCCGGTGCCAGAAGATCTGTGACCAGTGGGACG
CCCTCGGTTCTCTGACACATAGTCGCAGGGAAGCCCTGGAGAAAACAGAGAAGCAGCTGGAGGCCATCGACCAGCTGCACCTGGAATACGCCAAGCGCGCGGCCCCCTTCAACAACTGGATGGAGAGC
GCCATGGAGGACCTCCAGGACATGTTCATCGTCCATACCATCGAGGAGATTGAGGGCCTGATCTCAGCCCATGACCAGTTCAAGTCCACCCTGCCGGACGCCGATAGGGAGCGCGAGGCCATCCTGGC
CATCCACAAGGAGGCCCAGAGGATCGCTGAGAGCAACCACATCAAGCTGTCGGGCAGCAACCCCTACACCACCGTCACCCCGCAGATCATCAACTCCAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAA
AACGGGACCACGCCCTCCTGGAGGAGCAGAGCAAGCAGCAGTCCAACGAGCACCTGCGCCGCCAGTTCGCCAGCCAGGCCAACGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGCGC
ATCTCCATTGAGATGAACGGGACCCTGGAGGACCAGCTGAGCCACCTGAAGCAGTATGAACGCAGCATCGTGGACTACAAGCCCAACCTGGACCTGCTGGAGCAGCAGCACCAGCTCATCCAGGAGGC
CCTCATCTTCGACAACAAGCACACCAACTATACCATGGAGCACATTCGCGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCCGCACCATCAACGAGGTGGAGAACCAGATCCTCACCCGCGACGCCA
AGGGTATCAGCCAGGAGCAGATGCAGGAGTTCCGGGCGTCCTTCAACCACTTCGACAAGAAGCAGACAGGCAGCATGGACTCCGATGACTTCAGGGCTCTGCTTATCTCCACAGGATACAGCCTGGGT
GAGGCCGAGTTCAACCGCATCATGAGCCTGGTCGACCCCAACCATAGCGGCCTTGTGACCTTCCAAGCCTTCATCGACTTCATGTCGCGGGAGACCACCGACACGGACACGGCCGACCAGGTCATCGC
TTCCTTCAAGGTCCTGGCAGGGGACAAGAACTTCATCACAGCTGAGGAGCTGCGGAGAGAGCTGCCCCCCGACCAGGCTGAGTACTGCATCGCCCGCATGGCGCCATACCAGGGCCCTGATGCCGTGC
CCGGCGCCCTCGACTACAAGTCCTTCTCCACGGCCTTGTATGGCGAGAGCGACCTGTGAGGCCCCAGAGAGACCCGACCCAACACCCCCCATGGCCTCCAGGAGGGGCCTGGGCAGCCCCACAGTCCC
GTTCCTCCACTCTGTATCTATGCAAAGCACTCTCTGCAGTCCTCTGGGGTGGGTGGGTGGGCAGGGAGGGGCTGGGGCAGGCTCTCTCCTCTCTCTCTTTGTGGGTTGGCCAGGAGGTTCCCCCGACC
AGGTTGGGGAGACTTGGGGCCAGCGCTTCTGGTCTGGTAAATATGTATGATGTGTTGTGCTTTTTTAACCAAGGAGGGGCCAGTGGATTCCCACAGCACAACCGGTCCCTTCCATGCCCTGGGGATGC
CTCACCACACCCAGGTCTCTTCCTTTGCTCCCAGGTCCCTTCAAGGCCTCCCCAATCCAGGCCAAAGCCCCATGTGCCTTGTCCAGGAACTGCCTGGGCCATGCGAGGGGCCAGCAGAGGGCGCCACC
GCCACCTGACGGCTGGGGACCCACCCAGCCCCCTCTCTGCTCCAGACTCACTTGCCATTGCCAGGAGATGGCCCCAATAAGCACCCCGCTTTTGCAGCAGAGGAGCTGAGTTGGCAGACCGGGCCCCC
CTGAACCGCACCCCATCCCACCAGCCCCGGCCTTGCTTTGTCTGGCCTCACGTGTCTCAGATTTT

hide sequence

RefSeq Acc Id:

XM_034945703 ⟹ XP_034801594

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	20	44,939,775 - 45,022,391 (+)	NCBI
NHGRI_mPanPan1	19	46,810,142 - 46,892,741 (+)	NCBI
Mhudiblu_PPA_v0	19	35,742,758 - 35,825,321 (+)	NCBI

RefSeq Acc Id:

XM_034945704 ⟹ XP_034801595

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	20	44,939,793 - 45,022,391 (+)	NCBI
NHGRI_mPanPan1	19	46,810,115 - 46,892,741 (+)	NCBI
Mhudiblu_PPA_v0	19	35,742,759 - 35,825,315 (+)	NCBI

RefSeq Acc Id:

XM_063599570 ⟹ XP_063455640

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	20	44,939,775 - 45,022,391 (+)	NCBI


Protein RefSeqs	XP_008962915	(Get FASTA)	NCBI Sequence Viewer
	XP_008962916	(Get FASTA)	NCBI Sequence Viewer
	XP_034801594	(Get FASTA)	NCBI Sequence Viewer
	XP_034801595	(Get FASTA)	NCBI Sequence Viewer
	XP_063455640	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000035620.1
	ENSPPAP00000035684.1
	ENSPPAP00000035687.1
	ENSPPAP00000035699.1
	ENSPPAP00000035702.1
	ENSPPAP00000035718.1
	ENSPPAP00000035726.1
	ENSPPAP00000035763.1

RefSeq Acc Id:	XP_008962915 ⟸ XM_008964667
- Peptide Label:	isoform X5
- UniProtKB:	A0A2R9CB79 (UniProtKB/TrEMBL), A0A2R9C199 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVDYHAANQSYQYGPSSAGNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVS IGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEKA IMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDIN NGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLKHRDYETATLSDIKALIRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSHNVNTRCQKICDQWDALGSLTHSR REALEKTEKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEE QSKQQSNEHLRRQFASQANVVGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYERSIVDYKPNLDLLEQQHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQ EFRASFNHFDKKQTGSMDSDDFRALLISTGYSLGEAEFNRIMSLVDPNHSGLVTFQAFIDFMSRETTDTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKSF STALYGESDL hide sequence

RefSeq Acc Id:	XP_008962916 ⟸ XM_008964668
- Peptide Label:	isoform X4
- UniProtKB:	A0A2R9C199 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVDYHAANQSYQYGPSSAGNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHL RKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISW KDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVGTLRPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRRTIPWLEDRV PQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLKHRDYETATLSD IKALIRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSHNVNTRCQKICDQWDALGSLTHSRREALEKTEKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKST LPDADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQSNEHLRRQFASQANVVGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYERSIVDYKPNL DLLEQQHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKKQTGSMDSDDFRALLISTGYSLGEAEFNRIMSLVDPNHSGLVTFQAFIDFMSR ETTDTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKSFSTALYGESDL hide sequence

RefSeq Acc Id:	XP_034801594 ⟸ XM_034945703
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9C1S1 (UniProtKB/TrEMBL), A0A2R9C199 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034801595 ⟸ XM_034945704
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9C1B6 (UniProtKB/TrEMBL), A0A2R9C199 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSPPAP00000035620 ⟸ ENSPPAT00000058509

Protein Domains

Calponin-homology (CH) EF-hand

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000040184	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000058509.1	UniProtKB/TrEMBL
	ENSPPAT00000058571.1	UniProtKB/TrEMBL
	ENSPPAT00000058576.1	UniProtKB/TrEMBL
	ENSPPAT00000058588.1	UniProtKB/TrEMBL
	ENSPPAT00000058591.1	UniProtKB/TrEMBL
	ENSPPAT00000058607.1	UniProtKB/TrEMBL
	ENSPPAT00000058615.1	UniProtKB/TrEMBL
	ENSPPAT00000058652.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.418.10	UniProtKB/TrEMBL
	1.20.58.60	UniProtKB/TrEMBL
	EF-hand	UniProtKB/TrEMBL
InterPro	Actinin_actin-bd_CS	UniProtKB/TrEMBL
	CH-domain	UniProtKB/TrEMBL
	CH_dom_sf	UniProtKB/TrEMBL
	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF-hand_Ca_insen	UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
	Spectrin/alpha-actinin	UniProtKB/TrEMBL
	Spectrin_repeat	UniProtKB/TrEMBL
KEGG Report	pps:100981951	UniProtKB/TrEMBL
NCBI Gene	ACTN4	ENTREZGENE
PANTHER	SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN	UniProtKB/TrEMBL
Pfam	EF-hand_7	UniProtKB/TrEMBL
	EF-hand_8	UniProtKB/TrEMBL
	EFhand_Ca_insen	UniProtKB/TrEMBL
	PF00307	UniProtKB/TrEMBL
	Spectrin	UniProtKB/TrEMBL
PROSITE	ACTININ_1	UniProtKB/TrEMBL
	ACTININ_2	UniProtKB/TrEMBL
	EF_HAND_1	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
	PS50021	UniProtKB/TrEMBL
SMART	EFh	UniProtKB/TrEMBL
	efhand_Ca_insen	UniProtKB/TrEMBL
	SM00033	UniProtKB/TrEMBL
	SPEC	UniProtKB/TrEMBL
Superfamily-SCOP	Spectrin repeat	UniProtKB/TrEMBL
	SSF47473	UniProtKB/TrEMBL
	SSF47576	UniProtKB/TrEMBL
UniProt	A0A2R9C199	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9C1B6	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9C1C2_PANPA	UniProtKB/TrEMBL
	A0A2R9C1G4_PANPA	UniProtKB/TrEMBL
	A0A2R9C1S1	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9C1T8_PANPA	UniProtKB/TrEMBL
	A0A2R9C4D8_PANPA	UniProtKB/TrEMBL
	A0A2R9CB79	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)