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GENE - TERM ANNOTATION REPORT

10 Annotations Found.

An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with SLC6A4 (Homo sapiens)
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: located_in
  • Curation Notes: (PMID:12869649), (PMID:16870614), (PMID:17506858), (PMID:18317590)
  • Original References(s): PMID:12869649 PMID:16870614 PMID:17506858 PMID:18317590


    • An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from biological aspect of ancestor with FB:FBgn0011603 & FB:FBgn0034136 & FB:FBgn0035969 & FB:FBgn0039915 & MGI:1336891 & MGI:1336892 & MGI:1890216 & MGI:1921588 & MGI:2143217 & MGI:95627 & MGI:95628 & MGI:95629 & MGI:95760 & MGI:98488 & PANTHER:PTN000177662 & Slc6a14 (Rattus norvegicus) & Slc6a4 (Rattus norvegicus) & Slc6a3 (Rattus norvegicus) & Slc6a6 (Rattus norvegicus) & Slc6a8 (Rattus norvegicus) & Slc6a1 (Rattus norvegicus) & Slc6a13 (Rattus norvegicus) & Slc6a7 (Rattus norvegicus) & Slc6a9 (Rattus norvegicus) & Slc6a2 (Rattus norvegicus) & Slc6a5 (Rattus norvegicus) & Slc6a11 (Rattus norvegicus) & UniProtKB:P23975 & UniProtKB:P30531 & UniProtKB:P31641 & UniProtKB:P31645 & UniProtKB:P48029 & UniProtKB:P48067 & UniProtKB:Q01959 & UniProtKB:Q695T7 & UniProtKB:Q9NP91 & UniProtKB:Q9NSD5 & UniProtKB:Q9XT49 & UniProtKB:Q9Y345 & WB:WBGene00000934 & WB:WBGene00004909
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: is_active_in
  • Curation Notes: GO_REF:0000033
  • Original References(s): GO_REF:0000033


    • An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB:P31645 & ensembl:ENSP00000498537
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000107
  • Original References(s): GO_REF:0000107


    • An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Wade PR, etal., J Neurosci. 1996 Apr 1;16(7):2352-64. doi: 10.1523/JNEUROSCI.16-07-02352.1996.
  • 1 additional annotations were made from Wade PR, etal., J Neurosci. 1996 Apr 1;16(7):2352-64. doi: 10.1523/JNEUROSCI.16-07-02352.1996.
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: located_in
  • Curation Notes: PMID:8601815


    • An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Kilic F and Rudnick G, Proc Natl Acad Sci U S A. 2000 Mar 28;97(7):3106-11.
  • 4 additional annotations were made from Kilic F and Rudnick G, Proc Natl Acad Sci U S A. 2000 Mar 28;97(7):3106-11.
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: located_in
  • Curation Notes: PMID:10716733


    • An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Haase J, etal., Biochem Soc Trans. 2001 Nov;29(Pt 6):722-8.
  • 4 additional annotations were made from Haase J, etal., Biochem Soc Trans. 2001 Nov;29(Pt 6):722-8.
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: located_in
  • Curation Notes: PMID:11709063


    • An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Mochizuki H, etal., Neurochem Int. 2005 Jan;46(2):93-105. Epub 2004 Nov 26.
  • 3 additional annotations were made from Mochizuki H, etal., Neurochem Int. 2005 Jan;46(2):93-105. Epub 2004 Nov 26.
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: located_in
  • Curation Notes: PMID:15627510


    • An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB-SubCell:SL-0039
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000044
  • Original References(s): GO_REF:0000044


    • An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with InterPro:IPR013086
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000002
  • Original References(s): GO_REF:0000002


    • An association has been curated linking Slc6a4 and plasma membrane in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB-KW:KW-1003
  • 6605 RGD objects have been annotated to plasma membrane  (GO:0005886)
  • 110 papers in RGD have been used to annotate Slc6a4
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000043
  • Original References(s): GO_REF:0000043


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