Gene: Slc6a11 (solute carrier family 6 member 11) Rattus norvegicus
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Symbol: Slc6a11
Name: solute carrier family 6 member 11
Description: Exhibits gamma-aminobutyric acid:sodium symporter activity and neurotransmitter binding activity; involved in brain development, neurotransmitter reuptake, and response to drug; localizes to several cellular components, including the GABA-ergic synapse, cell projection, and intrinsic component of plasma membrane; biomarker of visual epilepsy; orthologous to human SLC6A11 (solute carrier family 6 member 11); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: GABA transporter GAT-3; Gabt4; GAT-3; Gat3; sodium- and chloride-dependent GABA transporter 3; solute carrier family 6 (neurotransmitter transporter), member 11; solute carrier family 6 (neurotransmitter transporter, GABA), member 11
Orthologs:
Homo sapiens (human) : SLC6A11 (solute carrier family 6 member 11)  HGNC  Alliance
Mus musculus (house mouse) : Slc6a11 (solute carrier family 6 (neurotransmitter transporter, GABA), member 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc6a11 (solute carrier family 6 member 11)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC6A11 (solute carrier family 6 member 11)
Canis lupus familiaris (dog) : SLC6A11 (solute carrier family 6 member 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc6a11 (solute carrier family 6 member 11)
Sus scrofa (pig) : SLC6A11 (solute carrier family 6 member 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04146,106,386 - 146,223,228 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04209,399,633 - 209,516,846 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44150,067,441 - 150,196,237 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14150,312,278 - 150,441,202 (+)NCBI
Celera4135,850,824 - 135,965,196 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc6a11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 628737
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.