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Gene: Slc6a5 (solute carrier family 6 member 5) Rattus norvegicus
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Symbol: Slc6a5
Name: solute carrier family 6 member 5
Description: Exhibits glycine transmembrane transporter activity. Involved in glycine transport and neurotransmitter uptake. Localizes to the glycinergic synapse and integral component of presynaptic membrane. Human ortholog(s) of this gene implicated in hyperekplexia 3. Orthologous to human SLC6A5 (solute carrier family 6 member 5); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: glycine transporter 2; glyT-2; GLYT2; sodium- and chloride-dependent glycine transporter 2; solute carrier family 6 (neurotransmitter transporter), member 5; solute carrier family 6 (neurotransmitter transporter, glycine), member 5
Orthologs:
Homo sapiens (human) : SLC6A5 (solute carrier family 6 member 5)  HGNC  Alliance
Mus musculus (house mouse) : Slc6a5 (solute carrier family 6 (neurotransmitter transporter, glycine), member 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc6a5 (solute carrier family 6 member 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC6A5 (solute carrier family 6 member 5)
Canis lupus familiaris (dog) : SLC6A5 (solute carrier family 6 member 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc6a5 (solute carrier family 6 member 5)
Sus scrofa (pig) : SLC6A5 (solute carrier family 6 member 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01105,270,418 - 105,336,369 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1105,284,753 - 105,336,363 (+)Ensembl
Rnor_5.01106,333,982 - 106,385,232 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4199,741,713 - 99,793,301 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1199,819,823 - 99,871,411 (+)NCBI
Celera193,839,503 - 93,890,460 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc6a5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621824
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.