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ONTOLOGY REPORT - ANNOTATIONS


Term:S-shaped body morphogenesis
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Accession:GO:0072050 term browser browse the term
Definition:The process in which the S-shaped body is generated and organized. The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron.



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S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (PMID:16937369) RGD PMID:16937369 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:3576186|PMID:15821257)
Ensembl
RGD
PMID:15821257 GO_REF:0000107 MGI:3576186 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (MGI:3576186|PMID:15821257) RGD PMID:15821257 MGI:3576186 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (MGI:3576186|PMID:15821257) RGD PMID:15821257 MGI:3576186 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009392|PMID:17610272)
UniProt
RGD
PMID:17610272 GO_REF:0000024 MGI:5009392 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Pax8 paired box 8 involved_in ISO (MGI:48612|PMID:1723950) RGD PMID:1723950 MGI:48612 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in IEP
ISO
PMID:9496787
(MGI:5050079|PMID:7909549)
RGD PMID:7909549 PMID:9496787 MGI:5050079, RGD:8553921 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IEP PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:54,499,962...54,538,840
Ensembl chr18:54,499,964...54,538,843
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Wt1 WT1 transcription factor involved_in ISO
IEA
ISS
UniProtKB:P22561 (PMID:10101119)
GO_REF:0000107
(MGI:1333093|PMID:10101119), (MGI:3806730|PMID:18618131)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:10101119 PMID:18618131 GO_REF:0000024 GO_REF:0000107 MGI:1333093 MGI:3806730 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:12141440)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12141440 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    developmental process 7042
      anatomical structure morphogenesis 3004
        S-shaped body morphogenesis 10
          mesonephric S-shaped body morphogenesis 0
          metanephric S-shaped body morphogenesis + 6
Path 2
Term Annotations click to browse term
  biological_process 20292
    developmental process 7042
      anatomical structure development 6550
        multicellular organism development 5276
          system development 4559
            renal system development 422
              kidney development 409
                nephron development 194
                  nephron morphogenesis 96
                    S-shaped body morphogenesis 10
                      mesonephric S-shaped body morphogenesis 0
                      metanephric S-shaped body morphogenesis + 6
paths to the root