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ONTOLOGY REPORT - ANNOTATIONS


Term:comma-shaped body morphogenesis
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Accession:GO:0072049 term browser browse the term
Definition:The process in which the comma-shaped body is generated and organized. The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron.



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comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3576186|PMID:15821257)
(PMID:15821257)
Ensembl
RGD
PMID:15821257 GO_REF:0000107 MGI:3576186 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within
involved_in
ISO (PMID:15821257)
(MGI:3576186|PMID:15821257)
RGD PMID:15821257 MGI:3576186 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within
involved_in
ISO (PMID:15821257)
(MGI:3576186|PMID:15821257)
RGD PMID:15821257 MGI:3576186 NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009392|PMID:17610272)
UniProt
RGD
PMID:17610272 GO_REF:0000024 MGI:5009392 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in IEP PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IEP PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of_or_within
involved_in
ISO (PMID:18618131)
(MGI:3806730|PMID:18618131)
RGD PMID:18618131 MGI:3806730 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
negative regulation of metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:12141440)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12141440 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20099
    developmental process 7010
      anatomical structure morphogenesis 2999
        comma-shaped body morphogenesis 8
          mesonephric comma-shaped body morphogenesis 0
          metanephric comma-shaped body morphogenesis + 5
Path 2
Term Annotations click to browse term
  biological_process 20099
    developmental process 7010
      anatomical structure development 6447
        multicellular organism development 5225
          system development 4486
            renal system development 401
              kidney development 387
                nephron development 177
                  nephron morphogenesis 95
                    comma-shaped body morphogenesis 8
                      mesonephric comma-shaped body morphogenesis 0
                      metanephric comma-shaped body morphogenesis + 5
paths to the root