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ONTOLOGY REPORT - ANNOTATIONS

Term:common bile duct development
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Accession:GO:0061009 term browser browse the term
Definition:The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gallbladder. The common bile duct transports bile from the liver and gallbladder to the intestine.
Synonyms:exact_synonym: CBD development;   bile duct development
 broad_synonym: EHBD development;   extrahepatic bile duct development


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common bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO
IEA		 MGI:2149672 (PMID:19619492)
GO_REF:0000107		 RGD
Ensembl		 PMID:19619492 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO
IEA		 MGI:3721426 (PMID:17580084)
GO_REF:0000107		 RGD
Ensembl		 PMID:17580084 GO_REF:0000107 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within ISO
IEA		 MGI:4410614 (PMID:19776033)
GO_REF:0000107		 RGD
Ensembl		 PMID:19776033 GO_REF:0000107 NCBI chr10:73,152,599...73,167,451
Ensembl chr10:72,655,921...72,666,655 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO
IEA		 (PMID:19913509)
GO_REF:0000107		 RGD
Ensembl		 PMID:19913509 GO_REF:0000107 NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
hepatic duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO
IEA		 MGI:3721426 (PMID:17580084)
GO_REF:0000107		 RGD
Ensembl		 PMID:17580084 GO_REF:0000107 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gak cyclin G associated kinase acts_upstream_of_or_within ISO MGI:2176228|MGI:5305733 (PMID:18434600) RGD PMID:18434600 NCBI chr14:1,234,272...1,308,492
Ensembl chr14:1,089,866...1,216,398 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO
IEA		 MGI:3617328 (PMID:25446530)
GO_REF:0000107		 RGD
Ensembl		 PMID:25446530 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO
IEA		 MGI:2177602|MGI:2385468 (PMID:19403103)
GO_REF:0000107		 RGD
Ensembl		 PMID:19403103 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    multicellular organismal process 9017
      multicellular organism development 5353
        tube development 1353
          common bile duct development 7
            cystic duct development 0
            hepatic duct development 1
            intrahepatic bile duct development 3
Path 2
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        multicellular organism development 5353
          system development 4635
            hepaticobiliary system development 294
              common bile duct development 7
                cystic duct development 0
                hepatic duct development 1
                intrahepatic bile duct development 3
paths to the root