ONTOLOGY REPORT - ANNOTATIONS
Term: antigen processing and presentation of endogenous peptide antigen via MHC class I
Accession: GO:0019885
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Definition: The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.
Synonyms: exact_synonym: endogenous peptide antigen processing and presentation via MHC class I
broad_synonym: antigen presentation, endogenous peptide antigen; antigen processing, endogenous antigen via MHC class I; antigen processing, endogenous antigen via major histocompatibility complex class I
alt_id: GO:0048004
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B2m
beta-2 microglobulin
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P04439 (PMID:24643698)
Ensembl RGD
PMID:24643698
GO_REF:0000107
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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Ide
insulin degrading enzyme
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:20364150) GO_REF:0000024
Ensembl RGD UniProt
PMID:20364150
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440
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RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:1402688), (PMID:20364150), (PMID:24643698)
RGD
PMID:1402688 PMID:20364150 PMID:24643698
NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
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Tap1
transporter 1, ATP binding cassette subfamily B member
involved_in
ISO IBA IEA
(PMID:11133832) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:11133832
GO_REF:0000033 GO_REF:0000107
NCBI chr20:4,656,262...4,666,634
Ensembl chr20:4,656,263...4,666,901
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Tap2
transporter 2, ATP binding cassette subfamily B member
acts_upstream_of_or_within involved_in
IDA ISO
PMID:1758495 (PMID:1538751), (PMID:8496691)
RGD
PMID:1538751 PMID:8496691 PMID:1758495
RGD:1299069
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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Tapbp
TAP binding protein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
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RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:8630735)
RGD
PMID:8630735
NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
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Tap2
transporter 2, ATP binding cassette subfamily B member
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:1538753)
Ensembl RGD
PMID:1538753
GO_REF:0000107
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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AABR07000137.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 1:1,307,185...1,308,310
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AABR07000147.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
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AABR07001348.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 1:39,668,472...39,670,153
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H60al
histocompatibility 60a like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,382,896...1,386,846
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Hfe
homeostatic iron regulator
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
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Micb
MHC class I polypeptide-related sequence B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:78,495,779...78,513,030
Ensembl chr 1:78,495,779...78,512,827
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Mill1
MHC I like leukocyte 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930
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Raet1l
retinoic acid early transcript 1L
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410
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RT1-A
RT1 class I, locus A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
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RT1-CE1
RT1 class I, locus1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486
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RT1-CE10
RT1 class I, locus CE10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,377,284...3,380,301
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RT1-CE11
RT1 class I, locus CE11
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362
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RT1-CE12
RT1 class I, locus CE12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,338,907...3,342,547
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RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:22031944)
RGD
PMID:22031944
NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
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RT1-CE3
RT1 class I, locus CE3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081
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RT1-M2
RT1 class Ib, locus M2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723
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RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
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RT1-M5
RT1 class Ib, locus M5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775
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RT1-M6-2
RT1 class I, locus M6, gene 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215
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RT1-N1
RT1 class Ib, locus N1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
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RT1-N2
RT1 class Ib, locus N2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900
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RT1-N3
RT1 class Ib, locus N3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530
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RT1-O1l1
RT1 class Ib, locus O1 like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081
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RT1-S3
RT1 class Ib, locus S3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
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RT1-T24-1
RT1 class I, locus T24, gene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154
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RT1-T24-3
RT1 class I, locus T24, gene 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154
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RT1-T24-4
RT1 class I, locus T24, gene 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
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Hfe
homeostatic iron regulator
involved_in
ISO
UniProtKB:P04439 (PMID:24643698)
RGD
PMID:24643698
NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
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