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ONTOLOGY REPORT - ANNOTATIONS


Term:antigen processing and presentation of endogenous peptide antigen via MHC class I
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Accession:GO:0019885 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.
Synonyms:exact_synonym: endogenous peptide antigen processing and presentation via MHC class I
 broad_synonym: antigen presentation, endogenous peptide antigen;   antigen processing, endogenous antigen via MHC class I;   antigen processing, endogenous antigen via major histocompatibility complex class I
 alt_id: GO:0048004



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antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in ISO
IEA
UniProtKB:P04439 (PMID:24643698)
GO_REF:0000107
RGD
Ensembl
PMID:24643698 GO_REF:0000107 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Ide insulin degrading enzyme involved_in ISO
IEA
ISS
(PMID:20364150)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20364150 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440
JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:1402688), (PMID:20364150), (PMID:24643698) RGD PMID:1402688 PMID:20364150 PMID:24643698 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:11133832)
Ensembl
GO_Central
RGD
PMID:11133832 GO_REF:0000033 GO_REF:0000107 NCBI chr20:4,656,262...4,666,634
Ensembl chr20:4,656,263...4,666,901
JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
ISO
IDA
(PMID:1538751), (PMID:8496691)
PMID:1758495
RGD PMID:1538751 PMID:8496691 PMID:1758495 RGD:1299069 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
G Tapbp TAP binding protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:8630735) RGD PMID:8630735 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:1538753)
Ensembl
RGD
PMID:1538753 GO_REF:0000107 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07000137.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:1,307,185...1,308,310 JBrowse link
G AABR07000147.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G AABR07001348.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:39,668,472...39,670,153 JBrowse link
G AABR07044308.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:1,789,779...1,793,115 JBrowse link
G AABR07044308.2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:1,768,641...1,772,357 JBrowse link
G AABR07044362.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:2,630,622...2,634,751 JBrowse link
G AABR07044383.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:3,403,777...3,436,874 JBrowse link
G AABR07044397.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:2,496,605...2,497,428 JBrowse link
G AC120486.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118
G ENSRNOG00000064836 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:2,606,621...2,618,153 JBrowse link
G ENSRNOG00000069480 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:3,310,825...3,421,372 JBrowse link
G H2-M10.6l histocompatibility 2, M region locus 10.6 like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,958,270...1,965,247
Ensembl chr20:1,925,049...1,966,105
JBrowse link
G H60al histocompatibility 60a like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,382,896...1,386,846 JBrowse link
G Hfe homeostatic iron regulator involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Micb MHC class I polypeptide-related sequence B involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:78,495,779...78,513,030
Ensembl chr 1:78,495,779...78,512,827
JBrowse link
G Mill1 MHC I like leukocyte 1 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930
JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970
JBrowse link
G Raet1l retinoic acid early transcript 1L involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410
JBrowse link
G RT1-A RT1 class I, locus A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-A1 RT1 class Ia, locus A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,905,309...4,914,593 JBrowse link
G RT1-A2 RT1 class Ia, locus A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,870,939...4,910,183 JBrowse link
G RT1-CE1 RT1 class I, locus1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486
JBrowse link
G RT1-CE11 RT1 class I, locus CE11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362
JBrowse link
G RT1-CE14 RT1 class I, locus CE14 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:3,296,654...3,300,795
Ensembl chr20:3,297,196...3,305,134
JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:22031944) RGD PMID:22031944 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G RT1-CE2 RT1 class I, locus CE2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:3,538,452...3,541,841
Ensembl chr20:3,537,809...3,541,790
JBrowse link
G RT1-CE3 RT1 class I, locus CE3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081
JBrowse link
G RT1-CE5 RT1 class I, locus CE5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,403,418...3,479,476 JBrowse link
G RT1-CE7 RT1 class I, locus CE7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,434,205...3,437,152 JBrowse link
G RT1-M1-2 RT1 class I, locus M1, gene 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,909,506...1,913,423
Ensembl chr20:1,910,656...1,917,936
JBrowse link
G RT1-M1-4 RT1 class I, locus M1, gene 4 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,891,365...1,893,585
Ensembl chr20:1,889,164...1,893,815
JBrowse link
G RT1-M1-5 RT1 class I, M1, gene 5 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,858,608...1,860,708
Ensembl chr20:1,811,604...1,860,708
JBrowse link
G RT1-M10-1 RT1 class I, locus M10, gene 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,986,817...1,988,908
Ensembl chr20:1,986,788...2,020,117
JBrowse link
G RT1-M2 RT1 class Ib, locus M2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723
JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
JBrowse link
G RT1-M5 RT1 class Ib, locus M5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775
JBrowse link
G RT1-M6-2 RT1 class I, locus M6, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215
JBrowse link
G RT1-N1 RT1 class Ib, locus N1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-N2 RT1 class Ib, locus N2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900
JBrowse link
G RT1-N3 RT1 class Ib, locus N3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530
JBrowse link
G RT1-O1 RT1 class Ib, locus O1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:2,655,116...2,657,520
Ensembl chr20:2,655,116...2,657,520
JBrowse link
G RT1-O1l1 RT1 class Ib, locus O1 like 1 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081
JBrowse link
G RT1-S2 RT1 class Ib, locus S2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:2,650,233...2,651,654
Ensembl chr20:2,649,964...2,652,027
JBrowse link
G RT1-S3 RT1 class Ib, locus S3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
JBrowse link
G RT1-T24-1 RT1 class I, locus T24, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154
JBrowse link
G RT1-T24-3 RT1 class I, locus T24, gene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154
JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in ISO UniProtKB:P04439 (PMID:24643698) RGD PMID:24643698 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link

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