ONTOLOGY REPORT - ANNOTATIONS |
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Term: | antigen processing and presentation |
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Accession: | GO:0019882
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browse the term
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Definition: | The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex. |
Synonyms: | exact_synonym: | antigen presentation; antigen processing |
| alt_id: | GO:0030333 |
| xref: | Wikipedia:Antigen_presentation |
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Ap3b1 |
adaptor related protein complex 3 subunit beta 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856989 (MGI:2679144|PMID:14557411) |
RGD |
PMID:14557411 |
MGI:2679144 |
NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
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Ap3d1 |
adaptor related protein complex 3 subunit delta 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856083 (MGI:2679144|PMID:14557411) |
RGD |
PMID:14557411 |
MGI:2679144 |
NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
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Cd1d1 |
CD1d1 molecule |
acts_upstream_of_or_within |
ISO |
(MGI:3041278|PMID:11754812) |
RGD |
PMID:11754812 |
MGI:3041278 |
NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
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Cd74 |
CD74 molecule |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
PMID:21873635 GO_REF:0000002 MGI:1927530 (MGI:3033762|PMID:7985028), (MGI:3033881|PMID:9432982), (MGI:3041278|PMID:11754812), (MGI:56575|PMID:3864916) |
InterPro RGD |
PMID:3864916 PMID:7985028 PMID:9432982 PMID:11754812 PMID:21873635 |
GO_REF:0000002 MGI:3033762 MGI:3033881 MGI:3041278 MGI:56575, RGD:13792537 |
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
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Erap1 |
endoplasmic reticulum aminopeptidase 1 |
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TAS |
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RGD |
PMID:12436109 |
RGD:1299520 |
NCBI chr 2:3,931,817...3,970,735
Ensembl chr 2:3,931,904...3,972,447
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Ext1 |
exostosin glycosyltransferase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5544678|PMID:23733868) |
RGD |
PMID:23733868 |
MGI:5544678 |
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
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Flt3 |
Fms related receptor tyrosine kinase 3 |
acts_upstream_of_or_within |
ISO |
MGI:3628823 (MGI:4452060|PMID:20457904) |
RGD |
PMID:20457904 |
MGI:4452060 |
NCBI chr12:7,623,930...7,699,474
Ensembl chr12:7,623,930...7,699,474
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Gba1 |
glucosylceramidase beta 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5429097|PMID:22665763) |
RGD |
PMID:22665763 |
MGI:5429097 |
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
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Ifng |
interferon gamma |
acts_upstream_of_or_within |
ISO |
(MGI:3054461|PMID:15356141) |
RGD |
PMID:15356141 |
MGI:3054461 |
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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Psap |
prosaposin |
acts_upstream_of_or_within |
ISO |
MGI:1888378 (MGI:3043877|PMID:14684827) |
RGD |
PMID:14684827 |
MGI:3043877 |
NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
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Psmb8 |
proteasome 20S subunit beta 8 |
involved_in acts_upstream_of_or_within |
NAS IEA ISO |
GO_REF:0000107 MGI:3055222 (MGI:3054461|PMID:15356141) |
Ensembl RGD |
PMID:15356141 PMID:1451788 |
GO_REF:0000107 MGI:3054461, RGD:70234 |
NCBI chr20:4,652,159...4,655,122
Ensembl chr20:4,652,159...4,655,283
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Psmb9 |
proteasome 20S subunit beta 9 |
acts_upstream_of_or_within |
ISO |
MGI:2152729 (MGI:3054461|PMID:15356141) |
RGD |
PMID:15356141 |
MGI:3054461 |
NCBI chr20:4,667,044...4,672,512
Ensembl chr20:4,666,046...4,672,512
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Rab10 |
RAB10, member RAS oncogene family |
involved_in |
ISO IEA |
(PMID:19717423) GO_REF:0000107 |
RGD Ensembl |
PMID:19717423 |
GO_REF:0000107 |
NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
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Rab27a |
RAB27A, member RAS oncogene family |
involved_in |
ISO |
(PMID:19717423) |
RGD |
PMID:19717423 |
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NCBI chr 8:73,782,730...73,836,630
Ensembl chr 8:73,782,694...73,847,829
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Rab32 |
RAB32, member RAS oncogene family |
involved_in |
ISO |
(PMID:19717423) |
RGD |
PMID:19717423 |
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NCBI chr 1:4,946,193...4,961,003
Ensembl chr 1:4,945,036...4,960,934
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Rab33a |
RAB33A, member RAS oncogene family |
involved_in |
ISO |
(PMID:19717423) |
RGD |
PMID:19717423 |
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NCBI chr X:127,694,219...127,706,378
Ensembl chr X:127,694,964...127,706,378
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Rab34 |
RAB34, member RAS oncogene family |
involved_in |
ISO IEA |
(PMID:19717423) GO_REF:0000107 |
RGD Ensembl |
PMID:19717423 |
GO_REF:0000107 |
NCBI chr10:63,083,319...63,087,538
Ensembl chr10:63,083,338...63,087,538
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Rab35 |
RAB35, member RAS oncogene family |
involved_in |
ISO IEA |
(PMID:19717423) GO_REF:0000107 |
RGD Ensembl |
PMID:19717423 |
GO_REF:0000107 |
NCBI chr12:40,967,102...40,981,183
Ensembl chr12:40,967,103...40,991,195
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Rab3b |
RAB3B, member RAS oncogene family |
involved_in |
ISO IEA |
(PMID:19717423) GO_REF:0000107 |
RGD Ensembl |
PMID:19717423 |
GO_REF:0000107 |
NCBI chr 5:123,629,562...123,697,410
Ensembl chr 5:123,644,423...123,697,401
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Rab3c |
RAB3C, member RAS oncogene family |
involved_in |
ISO |
(PMID:19717423) |
RGD |
PMID:19717423 |
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NCBI chr 2:41,627,720...41,843,541
Ensembl chr 2:41,627,720...41,843,749
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Rab4a |
RAB4A, member RAS oncogene family |
involved_in |
ISO |
(PMID:19717423) |
RGD |
PMID:19717423 |
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NCBI chr19:51,795,613...51,822,706
Ensembl chr19:51,795,613...51,822,703
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Rab5b |
RAB5B, member RAS oncogene family |
involved_in |
ISO |
(PMID:19717423) |
RGD |
PMID:19717423 |
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NCBI chr 7:1,109,449...1,128,348
Ensembl chr 7:1,109,454...1,128,268
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Rab6a |
RAB6A, member RAS oncogene family |
involved_in |
ISO IEA |
(PMID:19717423) GO_REF:0000107 |
RGD Ensembl |
PMID:19717423 |
GO_REF:0000107 |
NCBI chr 1:154,957,870...155,008,922
Ensembl chr 1:154,958,189...154,996,715
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Rab8b |
RAB8B, member RAS oncogene family |
involved_in |
ISO |
(PMID:19717423) |
RGD |
PMID:19717423 |
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NCBI chr 8:67,458,921...67,536,466
Ensembl chr 8:67,458,923...67,536,384
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Relb |
RELB proto-oncogene, NF-kB subunit |
acts_upstream_of_or_within |
ISO |
MGI:2179544 (MGI:70877|PMID:7845467) |
RGD |
PMID:7845467 |
MGI:70877 |
NCBI chr 1:79,257,738...79,285,490
Ensembl chr 1:79,257,725...79,285,507
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RT1-Ba |
RT1 class II, locus Ba |
acts_upstream_of_or_within |
ISO |
(MGI:3033881|PMID:9432982) |
RGD |
PMID:9432982 |
MGI:3033881 |
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
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RT1-Bb |
RT1 class II, locus Bb |
acts_upstream_of_or_within |
ISO |
(MGI:3033881|PMID:9432982) |
RGD |
PMID:9432982 |
MGI:3033881 |
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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RT1-CE16 |
RT1 class I, locus CE16 |
acts_upstream_of_or_within |
ISO |
(MGI:4421465|PMID:20038604) |
RGD |
PMID:20038604 |
MGI:4421465 |
NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
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RT1-DMa |
RT1 class II, locus DMa |
acts_upstream_of_or_within |
ISO |
MGI:1861933 (MGI:1933465|PMID:11148202), (MGI:3033762|PMID:7985028), (MGI:3033877|PMID:7584146), (MGI:3033881|PMID:9432982) |
RGD |
PMID:7584146 PMID:7985028 PMID:9432982 PMID:11148202 |
MGI:1933465 MGI:3033762 MGI:3033877 MGI:3033881 |
NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
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RT1-DMb |
RT1 class II, locus DMb |
acts_upstream_of_or_within |
ISO |
(MGI:1933465|PMID:11148202) |
RGD |
PMID:11148202 |
MGI:1933465 |
NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340
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RT1-DOa |
RT1 class II, locus DOa |
acts_upstream_of_or_within |
ISO |
MGI:2386294 (MGI:1913231|PMID:11069069) |
RGD |
PMID:11069069 |
MGI:1913231 |
NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
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RT1-O1l1 |
RT1 class Ib, locus O1 like 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081
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RT1-S2 |
RT1 class Ib, locus S2 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr20:2,650,233...2,651,654
Ensembl chr20:2,649,964...2,652,027
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Unc93b1 |
unc-93 homolog B1, TLR signaling regulator |
acts_upstream_of_or_within |
ISO |
MGI:3619211 (MGI:4452060|PMID:20457904) |
RGD |
PMID:20457904 |
MGI:4452060 |
NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
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Wdfy4 |
WDFY family member 4 |
acts_upstream_of_or_within involved_in |
ISO IBA |
(MGI:6257237|PMID:30409884) PMID:21873635 |
RGD |
PMID:30409884 PMID:21873635 |
MGI:6257237, RGD:13792537 |
NCBI chr16:8,221,853...8,450,494
Ensembl chr16:8,221,719...8,450,491
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Arl8b |
ADP-ribosylation factor like GTPase 8B |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21802320) |
UniProt RGD |
PMID:21802320 |
GO_REF:0000024 |
NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
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Atg5 |
autophagy related 5 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1338803|MGI:3612279 (MGI:5488556|PMID:23382543) |
Ensembl RGD |
PMID:23382543 |
GO_REF:0000107 MGI:5488556 |
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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B2m |
beta-2 microglobulin |
involved_in |
ISO IEA |
UniProtKB:P04439 (PMID:24643698) GO_REF:0000107 |
RGD Ensembl |
PMID:24643698 |
GO_REF:0000107 |
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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Ide |
insulin degrading enzyme |
involved_in |
ISO IEA ISS |
(PMID:20364150) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:20364150 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440
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RT1-CE16 |
RT1 class I, locus CE16 |
involved_in |
ISO |
(PMID:1402688), (PMID:20364150), (PMID:24643698) |
RGD |
PMID:1402688 PMID:20364150 PMID:24643698 |
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NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
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Tap1 |
transporter 1, ATP binding cassette subfamily B member |
involved_in |
IEA IBA ISO |
GO_REF:0000107 PMID:21873635 (PMID:11133832) |
Ensembl RGD |
PMID:11133832 PMID:21873635 |
GO_REF:0000107, RGD:13792537 |
NCBI chr20:4,656,262...4,666,634
Ensembl chr20:4,656,263...4,666,901
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Tap2 |
transporter 2, ATP binding cassette subfamily B member |
involved_in acts_upstream_of_or_within |
ISO IDA |
(PMID:1538751), (PMID:8496691) PMID:1758495 |
RGD |
PMID:1538751 PMID:8496691 PMID:1758495 |
RGD:1299069 |
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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Tapbp |
TAP binding protein |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
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RT1-CE16 |
RT1 class I, locus CE16 |
involved_in |
ISO |
(PMID:8630735) |
RGD |
PMID:8630735 |
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NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
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Tap2 |
transporter 2, ATP binding cassette subfamily B member |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:50291|PMID:1538753) GO_REF:0000107 |
RGD Ensembl |
PMID:1538753 |
GO_REF:0000107 MGI:50291 |
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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AABR07000137.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 1:1,307,185...1,308,310
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AABR07000147.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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AABR07001348.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 1:39,668,472...39,670,153
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H60al |
histocompatibility 60a like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:1,382,896...1,386,846
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Hfe |
homeostatic iron regulator |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
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Micb |
MHC class I polypeptide-related sequence B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:78,495,779...78,513,030
Ensembl chr 1:78,495,779...78,512,827
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Mill1 |
MHC I like leukocyte 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930
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Raet1l |
retinoic acid early transcript 1L |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410
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RT1-A |
RT1 class I, locus A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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RT1-A1 |
RT1 class Ia, locus A1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,905,309...4,914,593
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RT1-A2 |
RT1 class Ia, locus A2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,870,939...4,910,183
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RT1-CE1 |
RT1 class I, locus1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486
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RT1-CE11 |
RT1 class I, locus CE11 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362
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RT1-CE16 |
RT1 class I, locus CE16 |
involved_in |
ISO |
(PMID:22031944) |
RGD |
PMID:22031944 |
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NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
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RT1-CE3 |
RT1 class I, locus CE3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081
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RT1-CE5 |
RT1 class I, locus CE5 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,403,418...3,479,476
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RT1-CE7 |
RT1 class I, locus CE7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,434,205...3,437,152
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RT1-M2 |
RT1 class Ib, locus M2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723
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RT1-M3-1 |
RT1 class Ib, locus M3, gene 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
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RT1-M5 |
RT1 class Ib, locus M5 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775
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RT1-M6-2 |
RT1 class I, locus M6, gene 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215
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RT1-N1 |
RT1 class Ib, locus N1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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RT1-N2 |
RT1 class Ib, locus N2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900
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|
G |
RT1-N3 |
RT1 class Ib, locus N3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530
|
|
G |
RT1-O1l1 |
RT1 class Ib, locus O1 like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081
|
|
G |
RT1-S3 |
RT1 class Ib, locus S3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
|
|
G |
RT1-T24-1 |
RT1 class I, locus T24, gene 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154
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|
G |
RT1-T24-3 |
RT1 class I, locus T24, gene 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154
|
|
G |
RT1-T24-4 |
RT1 class I, locus T24, gene 4 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
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|
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G |
AABR07000137.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 1:1,307,185...1,308,310
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G |
AABR07000147.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
|
|
G |
AABR07001348.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 1:39,668,472...39,670,153
|
|
G |
H60al |
histocompatibility 60a like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:1,382,896...1,386,846
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G |
Hfe |
homeostatic iron regulator |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
|
|
G |
Micb |
MHC class I polypeptide-related sequence B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:78,495,779...78,513,030
Ensembl chr 1:78,495,779...78,512,827
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|
G |
Mill1 |
MHC I like leukocyte 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930
|
|
G |
Raet1l |
retinoic acid early transcript 1L |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410
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|
G |
RT1-A |
RT1 class I, locus A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
|
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G |
RT1-A1 |
RT1 class Ia, locus A1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,905,309...4,914,593
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G |
RT1-A2 |
RT1 class Ia, locus A2 |
involved_in |
ISO IBA |
(PMID:9754572) PMID:21873635 |
RGD |
PMID:9754572 PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,870,939...4,910,183
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G |
RT1-CE1 |
RT1 class I, locus1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486
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|
G |
RT1-CE11 |
RT1 class I, locus CE11 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362
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|
G |
RT1-CE3 |
RT1 class I, locus CE3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081
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|
G |
RT1-CE5 |
RT1 class I, locus CE5 |
involved_in |
ISO IBA |
(PMID:28636952) PMID:21873635 |
RGD |
PMID:28636952 PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,403,418...3,479,476
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G |
RT1-CE7 |
RT1 class I, locus CE7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:3,434,205...3,437,152
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G |
RT1-M2 |
RT1 class Ib, locus M2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723
|
|
G |
RT1-M3-1 |
RT1 class Ib, locus M3, gene 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:52901|PMID:8464890) (PMID:7584149), (PMID:8805247) |
RGD |
PMID:7584149 PMID:8464890 PMID:8805247 PMID:21873635 |
MGI:52901, RGD:13792537 |
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
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|
G |
RT1-M5 |
RT1 class Ib, locus M5 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775
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|
G |
RT1-M6-2 |
RT1 class I, locus M6, gene 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215
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|
G |
RT1-N1 |
RT1 class Ib, locus N1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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|
G |
RT1-N2 |
RT1 class Ib, locus N2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900
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|
G |
RT1-N3 |
RT1 class Ib, locus N3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530
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|
G |
RT1-O1l1 |
RT1 class Ib, locus O1 like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081
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|
G |
RT1-S3 |
RT1 class Ib, locus S3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
|
|
G |
RT1-T24-1 |
RT1 class I, locus T24, gene 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154
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|
G |
RT1-T24-3 |
RT1 class I, locus T24, gene 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154
|
|
G |
RT1-T24-4 |
RT1 class I, locus T24, gene 4 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
|
|
|
G |
RT1-A2 |
RT1 class Ia, locus A2 |
acts_upstream_of_or_within |
ISO |
(MGI:50291|PMID:1538753) |
RGD |
PMID:1538753 |
MGI:50291 |
NCBI chr20:4,870,939...4,910,183
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|
G |
Tap2 |
transporter 2, ATP binding cassette subfamily B member |
involved_in acts_upstream_of_or_within |
ISO IEA |
(PMID:1538751) GO_REF:0000107 (MGI:50291|PMID:1538753) |
RGD Ensembl |
PMID:1538751 PMID:1538753 |
GO_REF:0000107 MGI:50291 |
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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|
|
G |
RT1-Da |
RT1 class II, locus Da |
involved_in |
ISO |
(PMID:15322540) |
RGD |
PMID:15322540 |
|
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
|
|
G |
RT1-Db1 |
RT1 class II, locus Db1 |
involved_in |
ISO |
(PMID:15322540) |
RGD |
PMID:15322540 |
|
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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|
|
G |
Fcgr1a |
Fc gamma receptor 1A |
acts_upstream_of_or_within |
ISO |
MGI:2679238 (MGI:2679189|PMID:11911823) |
RGD |
PMID:11911823 |
MGI:2679189 |
NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994
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|
G |
Mr1 |
major histocompatibility complex, class I-related |
involved_in |
ISO IEA |
(PMID:27043408) GO_REF:0000107 |
RGD Ensembl |
PMID:27043408 |
GO_REF:0000107 |
NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970
|
|
G |
Psme1 |
proteasome activator subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:2388600 (MGI:3589852|PMID:15944286) |
RGD |
PMID:15944286 |
MGI:3589852 |
NCBI chr15:29,069,012...29,071,888
Ensembl chr15:29,068,729...29,071,890
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|
G |
Psme2 |
proteasome activator subunit 2 |
acts_upstream_of_or_within |
ISO |
MGI:2388601 (MGI:3589852|PMID:15944286) |
RGD |
PMID:15944286 |
MGI:3589852 |
NCBI chr15:29,078,495...29,082,794
Ensembl chr15:29,078,500...29,082,946
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|
|
G |
Mpeg1 |
macrophage expressed 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:7539255|PMID:35471730) |
UniProt RGD |
PMID:35471730 |
GO_REF:0000024 MGI:7539255 |
NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855
|
|
|
G |
Clec4a |
C-type lectin domain family 4, member A |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402
|
|
G |
Clec4a3 |
C-type lectin domain family 4, member A3 |
involved_in |
ISO |
(PMID:20530286) |
RGD |
PMID:20530286 |
|
NCBI chr 4:156,214,030...156,224,818
Ensembl chr 4:156,214,718...156,224,817
|
|
G |
Fcer1g |
Fc epsilon receptor Ig |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2384004 (MGI:2664488|PMID:11911824) |
RGD |
PMID:11911824 PMID:21873635 |
MGI:2664488, RGD:13792537 |
NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443
|
|
G |
Fcgr1a |
Fc gamma receptor 1A |
acts_upstream_of_or_within |
ISO |
MGI:2664927 (MGI:2664488|PMID:11911824) |
RGD |
PMID:11911824 |
MGI:2664488 |
NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994
|
|
G |
Fcgr2a |
Fc gamma receptor 2A |
acts_upstream_of_or_within |
ISO |
MGI:1861924 (MGI:2664488|PMID:11911824) |
RGD |
PMID:11911824 |
MGI:2664488 |
NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967
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|
G |
Ifi30 |
IFI30, lysosomal thiol reductase |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5009354|PMID:20538950) |
UniProt RGD |
PMID:20538950 |
GO_REF:0000024 MGI:5009354 |
NCBI chr16:18,675,590...18,679,655
Ensembl chr16:18,675,613...18,681,175
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|
G |
Mfsd6 |
major facilitator superfamily domain containing 6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:3692789|PMID:17010536) |
RGD |
PMID:17010536 PMID:21873635 |
MGI:3692789, RGD:13792537 |
NCBI chr 9:48,773,171...48,858,471
Ensembl chr 9:48,773,414...48,858,465
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|
G |
Mpeg1 |
macrophage expressed 1 |
involved_in |
ISO ISS |
(MGI:7493537|PMID:37347855) GO_REF:0000024 |
RGD UniProt |
PMID:37347855 |
GO_REF:0000024 MGI:7493537 |
NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855
|
|
G |
RT1-CE16 |
RT1 class I, locus CE16 |
involved_in |
ISO |
(PMID:12138174), (PMID:7504010) |
RGD |
PMID:7504010 PMID:12138174 |
|
NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
|
|
|
G |
Tapbp |
TAP binding protein |
acts_upstream_of_or_within involved_in |
ISO |
(MGI:1289739|PMID:9716645) |
RGD |
PMID:9716645 |
MGI:1289739 |
NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
|
|
|
G |
RT1-A2 |
RT1 class Ia, locus A2 |
involved_in |
ISO |
(PMID:20195504), (PMID:30087334) |
RGD |
PMID:20195504 PMID:30087334 |
|
NCBI chr20:4,870,939...4,910,183
|
|
G |
RT1-CE5 |
RT1 class I, locus CE5 |
involved_in |
ISO |
(PMID:23851683) |
RGD |
PMID:23851683 |
|
NCBI chr20:3,403,418...3,479,476
|
|
G |
RT1-M3-1 |
RT1 class Ib, locus M3, gene 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3700863|PMID:16461341) |
RGD |
PMID:16461341 |
MGI:3700863 |
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
|
|
|
G |
B2m |
beta-2 microglobulin |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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|
G |
Cd74 |
CD74 molecule |
acts_upstream_of_or_within |
ISO |
MGI:1927205 (MGI:52620|PMID:7679955), (MGI:79110|PMID:8598040) |
RGD |
PMID:7679955 PMID:8598040 |
MGI:52620 MGI:79110 |
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
|
|
G |
Ctse |
cathepsin E |
involved_in |
ISO IBA IDA |
(PMID:8765029) PMID:21873635 (MGI:2158899|PMID:11719510) PMID:8491674 |
RGD |
PMID:8765029 PMID:11719510 PMID:21873635 PMID:8491674 |
MGI:2158899, RGD:13792537, RGD:8553254 |
NCBI chr13:43,091,954...43,114,509
Ensembl chr13:43,092,128...43,114,502
|
|
G |
Ctss |
cathepsin S |
involved_in |
ISO IEA ISS |
(PMID:30612035) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:30612035 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:183,086,437...183,114,483
Ensembl chr 2:183,086,437...183,114,483
|
|
G |
Fcer1g |
Fc epsilon receptor Ig |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:1857165 (MGI:2687086|PMID:14643301) |
RGD |
PMID:14643301 PMID:21873635 |
MGI:2687086, RGD:13792537 |
NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443
|
|
G |
Fcgr2b |
Fc gamma receptor 2B |
acts_upstream_of_or_within |
ISO |
MGI:1857166 (MGI:2687086|PMID:14643301) |
RGD |
PMID:14643301 |
MGI:2687086 |
NCBI chr13:83,191,253...83,207,778
Ensembl chr13:83,193,163...83,207,778
|
|
G |
Ifi30 |
IFI30, lysosomal thiol reductase |
acts_upstream_of_or_within |
ISO |
MGI:2178559 (MGI:2153425|PMID:11701933) |
RGD |
PMID:11701933 |
MGI:2153425 |
NCBI chr16:18,675,590...18,679,655
Ensembl chr16:18,675,613...18,681,175
|
|
G |
Ighe |
immunoglobulin heavy constant epsilon |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
|
|
G |
Lgmn |
legumain |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:9872320) |
UniProt RGD |
PMID:9872320 |
GO_REF:0000024 |
NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480
|
|
G |
Pikfyve |
phosphoinositide kinase, FYVE-type zinc finger containing |
involved_in |
ISO |
(PMID:30612035) |
RGD |
PMID:30612035 |
|
NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868
|
|
G |
RT1-B |
RT1 class II, locus B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
|
|
G |
RT1-Ba |
RT1 class II, locus Ba |
involved_in acts_upstream_of_or_within |
IEA IBA ISO |
GO_REF:0000107 PMID:21873635 (MGI:1913231|PMID:11069069), (MGI:2153656|PMID:11714799), (MGI:2671681|PMID:9492004), (MGI:3033881|PMID:9432982), (MGI:3033882|PMID:11027433), (MGI:52620|PMID:7679955), (MGI:79110|PMID:8598040), (MGI:79111|PMID:8598041) |
Ensembl RGD |
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 PMID:11027433 PMID:11069069 PMID:11714799 PMID:21873635 More...
|
GO_REF:0000107 MGI:1913231 MGI:2153656 MGI:2671681 MGI:3033881 MGI:3033882 MGI:52620 MGI:79110 MGI:79111, RGD:13792537 |
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
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RT1-Bb |
RT1 class II, locus Bb |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:32341563) PMID:21873635 (MGI:1913231|PMID:11069069), (MGI:2153656|PMID:11714799), (MGI:2671681|PMID:9492004), (MGI:3033881|PMID:9432982), (MGI:3033882|PMID:11027433), (MGI:52620|PMID:7679955), (MGI:79110|PMID:8598040), (MGI:79111|PMID:8598041) |
RGD |
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 PMID:11027433 PMID:11069069 PMID:11714799 PMID:32341563 PMID:21873635 More...
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MGI:1913231 MGI:2153656 MGI:2671681 MGI:3033881 MGI:3033882 MGI:52620 MGI:79110 MGI:79111, RGD:13792537 |
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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RT1-Da |
RT1 class II, locus Da |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:15265931) PMID:21873635 (MGI:2153656|PMID:11714799), (MGI:3033882|PMID:11027433) |
RGD |
PMID:11027433 PMID:11714799 PMID:15265931 PMID:21873635 |
MGI:2153656 MGI:3033882, RGD:13792537 |
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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RT1-Db1 |
RT1 class II, locus Db1 |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:15265931), (PMID:32341563) PMID:21873635 (MGI:2153656|PMID:11714799), (MGI:3033882|PMID:11027433) |
RGD |
PMID:11027433 PMID:11714799 PMID:15265931 PMID:32341563 PMID:21873635 |
MGI:2153656 MGI:3033882, RGD:13792537 |
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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RT1-Db2 |
RT1 class II, locus Db2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,520,723...4,539,724
Ensembl chr20:4,520,713...4,539,705
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RT1-DMa |
RT1 class II, locus DMa |
acts_upstream_of_or_within |
ISO |
MGI:1861933|MGI:2384509|MGI:2652160 (MGI:2153656|PMID:11714799), (MGI:3033882|PMID:11027433), (MGI:79110|PMID:8598040), (MGI:79111|PMID:8598041) |
RGD |
PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799 |
MGI:2153656 MGI:3033882 MGI:79110 MGI:79111 |
NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
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RT1-DMb |
RT1 class II, locus DMb |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:8139689) (MGI:3033882|PMID:11027433) |
RGD |
PMID:8139689 PMID:11027433 |
MGI:3033882 |
NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340
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RT1-DOa |
RT1 class II, locus DOa |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:2675254 (MGI:2671681|PMID:9492004) PMID:21873635 |
RGD |
PMID:9492004 PMID:21873635 |
MGI:2671681, RGD:13792537 |
NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
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RT1-DOb |
RT1 class II, locus DOb |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
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RT1-Ha |
RT1 class II, locus Ha |
involved_in |
ISO IBA |
(PMID:20356827) PMID:21873635 |
RGD |
PMID:20356827 PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,760,631...4,770,662
Ensembl chr20:4,760,118...4,770,244
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RT1-Hb-ps1 |
RT1 class II, locus Hb, pseudogene 1 |
involved_in |
ISO |
(PMID:20356827), (PMID:32341563) |
RGD |
PMID:20356827 PMID:32341563 |
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NCBI chr20:4,775,598...4,779,590
Ensembl chr20:4,774,650...4,780,618
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Traf6 |
TNF receptor associated factor 6 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2678775 (MGI:2677080|PMID:14499111) GO_REF:0000107 |
RGD Ensembl |
PMID:14499111 |
GO_REF:0000107 MGI:2677080 |
NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
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Unc93b1 |
unc-93 homolog B1, TLR signaling regulator |
acts_upstream_of_or_within |
ISO |
MGI:3619211 (MGI:3615690|PMID:16415873) |
RGD |
PMID:16415873 |
MGI:3615690 |
NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
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B2m |
beta-2 microglobulin |
acts_upstream_of_or_within |
ISO |
(MGI:3611636|PMID:16299293) |
RGD |
PMID:16299293 |
MGI:3611636 |
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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G |
RT1-M3-1 |
RT1 class Ib, locus M3, gene 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3611636|PMID:16299293) |
RGD |
PMID:16299293 |
MGI:3611636 |
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
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Tap2 |
transporter 2, ATP binding cassette subfamily B member |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3611636|PMID:16299293) GO_REF:0000107 |
RGD Ensembl |
PMID:16299293 |
GO_REF:0000107 MGI:3611636 |
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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Ctsl |
cathepsin L |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:2655909|PMID:9545226), (MGI:3655445|PMID:12021314) |
UniProt RGD |
PMID:9545226 PMID:12021314 |
GO_REF:0000024 MGI:2655909 MGI:3655445 |
NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
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Ctss |
cathepsin S |
involved_in |
ISO |
(PMID:8612130) |
RGD |
PMID:8612130 |
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NCBI chr 2:183,086,437...183,114,483
Ensembl chr 2:183,086,437...183,114,483
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G |
RT1-Ba |
RT1 class II, locus Ba |
acts_upstream_of_or_within |
ISO |
(MGI:1913231|PMID:11069069) |
RGD |
PMID:11069069 |
MGI:1913231 |
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
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G |
RT1-Bb |
RT1 class II, locus Bb |
acts_upstream_of_or_within |
ISO |
(MGI:1913231|PMID:11069069) |
RGD |
PMID:11069069 |
MGI:1913231 |
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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G |
Slc11a1 |
solute carrier family 11 member 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:1857756 (MGI:3758128|PMID:17620357) GO_REF:0000107 |
RGD Ensembl |
PMID:17620357 |
GO_REF:0000107 MGI:3758128 |
NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
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Abcb9 |
ATP binding cassette subfamily B member 9 |
NOT|involved_in |
ISO |
(PMID:17977821) |
RGD |
PMID:17977821 |
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NCBI chr12:32,499,213...32,531,932
Ensembl chr12:32,499,225...32,531,931
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G |
Mr1 |
major histocompatibility complex, class I-related |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970
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G |
Marchf1 |
membrane associated ring-CH-type finger 1 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:3703462|PMID:17255932), (MGI:4430994|PMID:19917682) (PMID:18389477) |
RGD |
PMID:17255932 PMID:18389477 PMID:19917682 PMID:21873635 |
MGI:3703462 MGI:4430994, RGD:13792537 |
NCBI chr16:23,255,551...24,114,290
Ensembl chr16:23,258,799...24,114,277
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G |
Marchf8 |
membrane associated ring-CH-type finger 8 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:3785681|PMID:16785530) |
RGD |
PMID:16785530 PMID:21873635 |
MGI:3785681, RGD:13792537 |
NCBI chr 4:149,415,642...149,530,771
Ensembl chr 4:149,416,071...149,530,770
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RT1-Ba |
RT1 class II, locus Ba |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
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G |
RT1-Bb |
RT1 class II, locus Bb |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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G |
RT1-Da |
RT1 class II, locus Da |
involved_in |
ISO |
(PMID:21502329) |
RGD |
PMID:21502329 |
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NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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G |
RT1-Db1 |
RT1 class II, locus Db1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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Arl8b |
ADP-ribosylation factor like GTPase 8B |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6508507|PMID:25637027) |
UniProt RGD |
PMID:25637027 |
GO_REF:0000024 MGI:6508507 |
NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
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Cd1d1 |
CD1d1 molecule |
involved_in |
ISO IBA |
(PMID:10523605) PMID:21873635 |
RGD |
PMID:10523605 PMID:21873635 |
RGD:13792537 |
NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
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G |
Ap3b1 |
adaptor related protein complex 3 subunit beta 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856989 (MGI:2679144|PMID:14557411) |
RGD |
PMID:14557411 |
MGI:2679144 |
NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
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G |
Ap3d1 |
adaptor related protein complex 3 subunit delta 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856083 (MGI:2679144|PMID:14557411) |
RGD |
PMID:14557411 |
MGI:2679144 |
NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
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G |
Cd1d1 |
CD1d1 molecule |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:2679144|PMID:14557411) |
RGD |
PMID:14557411 PMID:21873635 |
MGI:2679144, RGD:13792537 |
NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
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G |
Fcer2 |
Fc epsilon receptor II |
involved_in |
ISO |
(PMID:2167225) |
RGD |
PMID:2167225 |
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NCBI chr12:1,742,809...1,754,476
Ensembl chr12:1,742,815...1,754,476
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Ighe |
immunoglobulin heavy constant epsilon |
involved_in |
ISO |
(PMID:2167225) |
RGD |
PMID:2167225 |
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Fcgr3a |
Fc gamma receptor 3A |
involved_in |
ISO |
(MGI:5904203|PMID:28389502) |
RGD |
PMID:28389502 |
MGI:5904203 |
NCBI chr13:83,249,905...83,259,921
Ensembl chr13:83,249,872...83,259,921
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G |
Mpeg1 |
macrophage expressed 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:7493537|PMID:37347855) |
UniProt RGD |
PMID:37347855 |
GO_REF:0000024 MGI:7493537 |
NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855
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Washc1 |
WASH complex subunit 1 |
involved_in |
ISO |
(MGI:5613771|PMID:24886983) |
RGD |
PMID:24886983 |
MGI:5613771 |
NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
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RT1-Da |
RT1 class II, locus Da |
involved_in |
ISO |
(PMID:29884618) |
RGD |
PMID:29884618 |
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NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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G |
RT1-Db1 |
RT1 class II, locus Db1 |
involved_in |
ISO |
(PMID:29884618), (PMID:30282837) |
RGD |
PMID:29884618 PMID:30282837 |
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NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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Hfe |
homeostatic iron regulator |
involved_in |
ISO |
UniProtKB:P04439 (PMID:24643698) |
RGD |
PMID:24643698 |
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NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
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G |
Tapbpl |
TAP binding protein-like |
involved_in |
ISO |
(PMID:23401559) |
RGD |
PMID:23401559 |
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NCBI chr 4:158,021,454...158,028,905
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RT1-DOa |
RT1 class II, locus DOa |
involved_in |
ISO |
(PMID:22733780) |
RGD |
PMID:22733780 |
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NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
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G |
RT1-DOb |
RT1 class II, locus DOb |
involved_in |
ISO |
(PMID:22733780) |
RGD |
PMID:22733780 |
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NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
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Thbs1 |
thrombospondin 1 |
involved_in |
ISO |
(PMID:16882710) |
RGD |
PMID:16882710 |
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NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
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Cd68 |
Cd68 molecule |
involved_in |
ISO |
(MGI:5285055|PMID:21572087) |
RGD |
PMID:21572087 |
MGI:5285055 |
NCBI chr10:54,381,814...54,383,693
Ensembl chr10:54,381,815...54,383,697
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G |
Fgl2 |
fibrinogen-like 2 |
acts_upstream_of_or_within |
ISO |
MGI:3582343 (MGI:6188369|PMID:29341118) |
RGD |
PMID:29341118 |
MGI:6188369 |
NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
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G |
Thbs1 |
thrombospondin 1 |
involved_in |
ISO |
(PMID:16882710) |
RGD |
PMID:16882710 |
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NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
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G |
Fgl2 |
fibrinogen-like 2 |
acts_upstream_of_or_within |
ISO |
MGI:3582343 (MGI:6188369|PMID:29341118) |
RGD |
PMID:29341118 |
MGI:6188369 |
NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
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Calr |
calreticulin |
involved_in |
ISO |
(MGI:3813437|PMID:11825569) |
RGD |
PMID:11825569 |
MGI:3813437 |
NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
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G |
Pdia3 |
protein disulfide isomerase family A, member 3 |
involved_in |
ISO IEA |
(PMID:17603487) GO_REF:0000107 |
RGD Ensembl |
PMID:17603487 |
GO_REF:0000107 |
NCBI chr 3:108,388,189...108,412,013
Ensembl chr 3:108,388,245...108,413,236
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G |
Tapbp |
TAP binding protein |
involved_in |
ISO IBA |
(PMID:10636848), (PMID:17603487) PMID:21873635 |
RGD |
PMID:10636848 PMID:17603487 PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
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G |
Tapbpl |
TAP binding protein-like |
involved_in |
ISO |
(PMID:26869717) |
RGD |
PMID:26869717 |
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NCBI chr 4:158,021,454...158,028,905
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G |
B2m |
beta-2 microglobulin |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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G |
Ighe |
immunoglobulin heavy constant epsilon |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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G |
RT1-B |
RT1 class II, locus B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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G |
RT1-Ba |
RT1 class II, locus Ba |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
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G |
RT1-Bb |
RT1 class II, locus Bb |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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G |
RT1-Da |
RT1 class II, locus Da |
involved_in |
ISO IBA |
(PMID:1448172), (PMID:22733780), (PMID:7606781) PMID:21873635 |
RGD |
PMID:1448172 PMID:7606781 PMID:22733780 PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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G |
RT1-Db1 |
RT1 class II, locus Db1 |
involved_in |
ISO IBA |
(PMID:1448172), (PMID:22733780), (PMID:7606781) PMID:21873635 |
RGD |
PMID:1448172 PMID:7606781 PMID:22733780 PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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G |
RT1-Db2 |
RT1 class II, locus Db2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,520,723...4,539,724
Ensembl chr20:4,520,713...4,539,705
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G |
RT1-DMa |
RT1 class II, locus DMa |
involved_in |
ISO |
(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930) |
RGD |
PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 |
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NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
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G |
RT1-DMb |
RT1 class II, locus DMb |
involved_in |
ISO |
(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930) |
RGD |
PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 |
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NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340
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G |
RT1-DOa |
RT1 class II, locus DOa |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
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G |
RT1-DOb |
RT1 class II, locus DOb |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
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G |
RT1-Ha |
RT1 class II, locus Ha |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,760,631...4,770,662
Ensembl chr20:4,760,118...4,770,244
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G |
Tapbp |
TAP binding protein |
involved_in |
ISO |
(MGI:3687922|PMID:12594855) |
RGD |
PMID:12594855 |
MGI:3687922 |
NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
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G |
Tap1 |
transporter 1, ATP binding cassette subfamily B member |
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TAS |
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RGD |
PMID:14622282 |
RGD:1300480 |
NCBI chr20:4,656,262...4,666,634
Ensembl chr20:4,656,263...4,666,901
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G |
Tap2 |
transporter 2, ATP binding cassette subfamily B member |
involved_in |
TAS IEA ISO |
GO_REF:0000107 (PMID:1538751), (PMID:8496691) |
Ensembl RGD |
PMID:1538751 PMID:8496691 PMID:14622282 |
GO_REF:0000107, RGD:1300480 |
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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G |
Clec4a |
C-type lectin domain family 4, member A |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402
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G |
Clec4a3 |
C-type lectin domain family 4, member A3 |
involved_in |
ISO |
(PMID:18258799), (PMID:20530286) |
RGD |
PMID:18258799 PMID:20530286 |
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NCBI chr 4:156,214,030...156,224,818
Ensembl chr 4:156,214,718...156,224,817
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G |
RT1-Bb |
RT1 class II, locus Bb |
involved_in |
ISO |
(MGI:4942246|PMID:14607905) |
RGD |
PMID:14607905 |
MGI:4942246 |
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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G |
Tap2 |
transporter 2, ATP binding cassette subfamily B member |
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IMP |
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RGD |
PMID:1758495 |
RGD:1299069 |
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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G |
Pycard |
PYD and CARD domain containing |
involved_in |
ISO |
(MGI:5291858|PMID:21892172) |
RGD |
PMID:21892172 |
MGI:5291858 |
NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
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G |
Trem2 |
triggering receptor expressed on myeloid cells 2 |
involved_in |
ISO |
(PMID:11602640) |
RGD |
PMID:11602640 |
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NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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G |
Ccl19 |
C-C motif chemokine ligand 19 |
involved_in |
ISO |
(MGI:3576832|PMID:15845453) |
RGD |
PMID:15845453 |
MGI:3576832 |
NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308
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G |
Ccl21 |
C-C motif chemokine ligand 21 |
involved_in |
ISO |
(MGI:3576832|PMID:15845453) |
RGD |
PMID:15845453 |
MGI:3576832 |
NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
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G |
Ccr7 |
C-C motif chemokine receptor 7 |
involved_in |
ISO |
(MGI:3576832|PMID:15845453) |
RGD |
PMID:15845453 |
MGI:3576832 |
NCBI chr10:84,098,193...84,108,309
Ensembl chr10:84,097,381...84,108,309
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G |
Cd74 |
CD74 molecule |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4943392|PMID:18003616) |
BHF-UCL RGD |
PMID:18003616 |
GO_REF:0000024 MGI:4943392 |
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
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G |
Nod1 |
nucleotide-binding oligomerization domain containing 1 |
involved_in |
ISO |
(MGI:4442557|PMID:20008287) |
RGD |
PMID:20008287 |
MGI:4442557 |
NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
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G |
Nod2 |
nucleotide-binding oligomerization domain containing 2 |
involved_in |
ISO |
(MGI:4442557|PMID:20008287) |
RGD |
PMID:20008287 |
MGI:4442557 |
NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
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G |
Slc11a1 |
solute carrier family 11 member 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3839054|PMID:18984740) GO_REF:0000107 |
RGD Ensembl |
PMID:18984740 |
GO_REF:0000107 MGI:3839054 |
NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
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G |
Ptpn22 |
protein tyrosine phosphatase, non-receptor type 22 |
NOT|involved_in |
ISO |
(MGI:5562517|PMID:23871208) |
RGD |
PMID:23871208 |
MGI:5562517 |
NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
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G |
Ythdf1 |
YTH N6-methyladenosine RNA binding protein F1 |
involved_in |
ISO |
(MGI:6281071|PMID:30728504) |
RGD |
PMID:30728504 |
MGI:6281071 |
NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
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G |
Was |
WASP actin nucleation promoting factor |
involved_in |
ISO |
(PMID:22804504) |
RGD |
PMID:22804504 |
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NCBI chr X:14,405,105...14,413,850
Ensembl chr X:14,405,124...14,413,849
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G |
Icam1 |
intercellular adhesion molecule 1 |
acts_upstream_of_or_within |
ISO |
(MGI:58576|PMID:2479693) |
RGD |
PMID:2479693 |
MGI:58576 |
NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
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G |
Kdm5d |
lysine demethylase 5D |
acts_upstream_of_or_within |
ISO |
(MGI:3713409|PMID:16301625) |
RGD |
PMID:16301625 |
MGI:3713409 |
NCBI chr Y:527,069...624,019
Ensembl chr Y:530,401...624,018
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G |
Rftn1 |
raftlin lipid raft linker 1 |
involved_in |
ISO |
(MGI:3850290|PMID:19414744) |
RGD |
PMID:19414744 |
MGI:3850290 |
NCBI chr 9:10,804,611...11,002,084
Ensembl chr 9:10,804,611...11,002,084
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G |
Treml4 |
triggering receptor expressed on myeloid cells-like 4 |
acts_upstream_of_or_within |
ISO |
(MGI:5307168|PMID:22210914) |
RGD |
PMID:22210914 |
MGI:5307168 |
NCBI chr 9:12,718,968...12,743,879
Ensembl chr 9:12,721,815...12,743,253
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G |
Trex1 |
three prime repair exonuclease 1 |
acts_upstream_of_or_within |
ISO |
MGI:3052754 (MGI:5554502|PMID:24218451) |
RGD |
PMID:24218451 |
MGI:5554502 |
NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
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G |
Unc93b1 |
unc-93 homolog B1, TLR signaling regulator |
acts_upstream_of_or_within |
ISO |
MGI:3619211 (MGI:3615690|PMID:16415873) |
RGD |
PMID:16415873 |
MGI:3615690 |
NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
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Term paths to the root
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