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ONTOLOGY REPORT - ANNOTATIONS

Term:isocitrate metabolic process
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Accession:GO:0006102 term browser browse the term
Definition:The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle.
Synonyms:exact_synonym: isocitrate metabolism


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isocitrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACO2 aconitase 2 ISO RGD PMID:9712727 PMID:14674759 RGD:2306852 RGD:2306877 NCBI chr22:22,363,178...22,423,041
Ensembl chr22:40,450,276...40,510,200 		JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 involved_in ISO
IEA		 RGD
TreeGrafter
InterPro
Ensembl		 PMID:17447164 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1624966 NCBI chr2B:95,475,320...95,494,286
Ensembl chr2B:213,599,036...213,617,175 		JBrowse link
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr15:68,771,050...68,790,523
Ensembl chr15:87,972,889...87,991,276 		JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:57,078,588...57,099,934
Ensembl chr15:76,043,311...76,064,634 		JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:2,766,598...2,772,571
Ensembl chr20:2,529,510...2,535,570 		JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:143,336,460...143,345,274
Ensembl chr  X:153,222,309...153,231,135 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16442
    metabolic process 10307
      small molecule metabolic process 1669
        alcohol metabolic process 351
          secondary alcohol metabolic process 145
            isocitrate metabolic process 6
Path 2
Term Annotations click to browse term
  biological_process 16442
    metabolic process 10307
      cellular metabolic process 8636
        organic acid metabolic process 898
          oxoacid metabolic process 891
            carboxylic acid metabolic process 869
              tricarboxylic acid metabolic process 16
                isocitrate metabolic process 6
paths to the root