Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:alcohol metabolic process
go back to main search page
Accession:GO:0006066 term browser browse the term
Definition:The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
Synonyms:exact_synonym: alcohol metabolism


show annotations for term's descendants           Sort by:
 
alcohol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in ISO (PMID:3466164) RGD PMID:3466164 NCBI chr 2:226,948,717...226,966,747 JBrowse link
G Dhrs4 dehydrogenase/reductase 4 involved_in ISO (PMID:18571493) RGD PMID:18571493 NCBI chr15:28,966,544...28,978,135
Ensembl chr15:28,966,553...28,978,127 		JBrowse link
alcohol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide acts_upstream_of_or_within ISO (MGI:1346361|PMID:10514444) RGD PMID:10514444 MGI:1346361 NCBI chr 2:226,948,717...226,966,747 JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
IEA
ISO		 PMID:19342457
GO_REF:0000107
(PMID:19342457)		 Ensembl
RGD		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376 		JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP
IBA		 PMID:19342457
PMID:21873635		 UniProt
GO_Central		 PMID:19342457 PMID:21873635 RGD:4891166, RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278 		JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:11832364 PMID:21873635 RGD:727991, RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004 		JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 involved_in ISO (PMID:1741400), (PMID:19342457), (PMID:2256920), (PMID:23322723) RGD PMID:1741400 PMID:2256920 PMID:19342457 PMID:23322723 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048 		JBrowse link
aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B involved_in ISO MGI:3693642 (MGI:3692691|PMID:16868309) RGD PMID:16868309 MGI:3692691 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115 		JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:6478095|PMID:28567665)		 Ensembl
RGD		 PMID:28567665 GO_REF:0000107 MGI:6478095 NCBI chr 1:176,430,063...176,484,451
Ensembl chr 1:176,430,103...176,484,451 		JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in IBA
IEA
ISO		 PMID:21873635
GO_REF:0000107
(PMID:15465040)		 Ensembl
RGD		 PMID:15465040 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551 		JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA
IBA		 (PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
GO_REF:0000107
(MGI:3590419|PMID:15972816)
PMID:21873635		 RGD
Ensembl		 PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 More... GO_REF:0000107 MGI:3590419, RGD:13792537 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241 		JBrowse link
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 involved_in ISO (PMID:15465040), (PMID:18511070) RGD PMID:15465040 PMID:18511070 NCBI chr 1:168,749,302...168,798,079
Ensembl chr 1:168,751,038...168,797,759 		JBrowse link
G Cyp3a62 cytochrome P450, family 3, subfamily a, polypeptide 62 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:16,397,998...16,433,833
Ensembl chr12:16,397,998...16,433,833 		JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07021955.1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041
G AABR07028137.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AABR07028157.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AABR07060293.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:67,330,588...67,331,346 JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 involved_in TAS PMID:10806397 UniProt PMID:10806397 RGD:2326086 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2180783 (MGI:2180727|PMID:8647961)		 RGD PMID:8647961 PMID:21873635 MGI:2180727, RGD:13792537 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa4 apolipoprotein A4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469 		JBrowse link
G Apoa5 apolipoprotein A5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816 		JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:11015575) RGD PMID:11015575 NCBI chr19:13,873,490...13,912,035 JBrowse link
G Cftr CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856709 (MGI:3709533|PMID:17085523)		 Ensembl
RGD		 PMID:17085523 GO_REF:0000107 MGI:3709533 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756 		JBrowse link
G Cyb5r3 cytochrome b5 reductase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:114,306,686...114,324,247
Ensembl chr 7:114,306,685...114,324,298 		JBrowse link
G Dhcr24 24-dehydrocholesterol reductase involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:11519011)
MGI:3027024 (MGI:2686848|PMID:14684813), (MGI:3624168|PMID:16321981), (MGI:3769949|PMID:16513830)		 UniProt
RGD		 PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 GO_REF:0000024 MGI:2686848 MGI:3624168 MGI:3769949 NCBI chr 5:121,344,637...121,368,853
Ensembl chr 5:121,344,575...121,371,137 		JBrowse link
G Dhcr7 7-dehydrocholesterol reductase involved_in TAS
IBA
IEA
ISO
IMP
IC
IDA		 PMID:21873635
GO_REF:0000041
(PMID:9465114)		 UniProt
RGD		 PMID:9465114 PMID:12031495 PMID:21873635 PMID:9831636 PMID:10666310 More... GO_REF:0000041, RGD:625561, RGD:13792537, RGD:2316918, RGD:2316916, RGD:632010 NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055 		JBrowse link
G Ebp EBP, cholestenol delta-isomerase involved_in IDA
ISO
IBA
IEA
TAS		 (PMID:9894009)
PMID:21873635
GO_REF:0000041		 RGD
UniProt		 PMID:9894009 PMID:11171067 PMID:21873635 PMID:11171067 GO_REF:0000041, RGD:628445, RGD:13792537, RGD:628445 NCBI chr  X:14,299,427...14,305,826
Ensembl chr  X:14,299,448...14,305,826 		JBrowse link
G Fdft1 farnesyl diphosphate farnesyl transferase 1 involved_in TAS
IBA
IMP		 PMID:21873635 RGD
GO_Central		 PMID:1400448 PMID:21873635 PMID:16440058 RGD:728402, RGD:13792537, RGD:1626611 NCBI chr15:37,412,143...37,440,198
Ensembl chr15:37,412,146...37,440,287 		JBrowse link
G Fdps farnesyl diphosphate synthase TAS RGD PMID:1321149 RGD:728501 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776 		JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:12027950) RGD PMID:12027950 NCBI chr  X:152,201,081...152,220,863
Ensembl chr  X:152,201,098...152,220,801 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within		 ISO (PMID:23063590)
(MGI:2180727|PMID:8647961), (MGI:3603484|PMID:15845870), (MGI:70238|PMID:7798939)		 RGD PMID:7798939 PMID:8647961 PMID:15845870 PMID:23063590 MGI:2180727 MGI:3603484 MGI:70238 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703 		JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130 		JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in
acts_upstream_of_or_within		 ISO
IBA
ISS
IEA		 (PMID:12829805)
(MGI:2673751|PMID:12829805)
PMID:21873635
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:12829805 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:2673751, RGD:13792537 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017 		JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in TAS
IEA		 GO_REF:0000043 UniProt
RGD		 PMID:9228075 GO_REF:0000043, RGD:729078 NCBI chr17:61,629,592...61,637,357
Ensembl chr17:61,629,594...61,637,357 		JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1920249 (MGI:3689278|PMID:16955138)
(PMID:32322062)		 RGD PMID:16955138 PMID:32322062 PMID:21873635 MGI:3689278, RGD:13792537 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952 		JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA		 GO_REF:0000024
MGI:1916289 (MGI:3689278|PMID:16955138)
PMID:21873635
(PMID:32322062)		 UniProt
RGD		 PMID:16955138 PMID:32322062 PMID:21873635 GO_REF:0000024 MGI:3689278, RGD:13792537 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923 		JBrowse link
G Lbr lamin B receptor involved_in ISO
IEA
ISS		 (PMID:16784888), (PMID:27336722)
(MGI:3822946|PMID:18785926), (MGI:5308142|PMID:22140257)
GO_REF:0000041
GO_REF:0000024		 RGD
UniProt		 PMID:16784888 PMID:18785926 PMID:22140257 PMID:27336722 GO_REF:0000024 GO_REF:0000041 MGI:3822946 MGI:5308142 NCBI chr13:93,539,360...93,564,065 JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,504,294...61,507,015
Ensembl chr17:61,504,535...61,507,015 		JBrowse link
G LOC103694120 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,420,357...61,423,924 JBrowse link
G LOC291276 similar to isopentenyl diphosphate delta-isomerase type 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,549,335...61,553,178 JBrowse link
G Lss lanosterol synthase involved_in IMP
IDA
IBA
ISO
IEA		 PMID:7568116
PMID:21873635
(PMID:17186944)
GO_REF:0000107		 RGD
Ensembl		 PMID:17186944 PMID:16440058 PMID:7568116 PMID:21873635 PMID:1429550 GO_REF:0000107, RGD:1626611, RGD:728996, RGD:13792537, RGD:2316919 NCBI chr20:12,091,138...12,118,858
Ensembl chr20:12,092,774...12,118,762 		JBrowse link
G Msmo1 methylsterol monooxygenase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:24,980,680...24,997,927
Ensembl chr16:24,980,697...24,998,016 		JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in NAS
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:11767099 GO_REF:0000041, RGD:729305 NCBI chr19:50,496,366...50,506,389
Ensembl chr19:50,496,367...50,507,971 		JBrowse link
G Mvk mevalonate kinase involved_in TAS
IEA
IBA
ISO		 GO_REF:0000043
GO_REF:0000107
PMID:21873635
(PMID:1377680)		 UniProt
Ensembl
RGD		 PMID:1377680 PMID:2158094 PMID:21873635 GO_REF:0000043 GO_REF:0000107, RGD:728935, RGD:13792537 NCBI chr12:42,141,391...42,158,858
Ensembl chr12:42,141,384...42,158,882 		JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113 		JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:150,775,034...150,807,161
Ensembl chr  X:150,775,080...150,807,142 		JBrowse link
G Pmvk phosphomevalonate kinase involved_in IBA
NAS
ISO		 PMID:21873635
PMID:10191291
(PMID:8663599)		 RGD PMID:8663599 PMID:21873635 PMID:10191291 RGD:13792537, RGD:8553625 NCBI chr 2:174,876,586...174,886,365
Ensembl chr 2:174,876,657...174,886,364 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543 		JBrowse link
G RGD1564347 similar to isopentenyl diphosphate delta-isomerase type 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,372,853...61,386,459 JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA
ISO
IDA		 GO_REF:0000041
(MGI:3822946|PMID:18785926)
PMID:16784888
(PMID:16784888)		 UniProt
RGD		 PMID:16784888 PMID:18785926 PMID:16784888 GO_REF:0000041 MGI:3822946, RGD:13825441 NCBI chr 1:203,355,930...203,360,287
Ensembl chr 1:203,355,931...203,360,270 		JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp51 cytochrome P450, family 51 IDA RGD PMID:7581240 RGD:2316902 NCBI chr 4:30,036,956...30,055,410
Ensembl chr 4:30,036,865...30,055,410 		JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in ISO (PMID:11519011) RGD PMID:11519011 NCBI chr 5:121,344,637...121,368,853
Ensembl chr 5:121,344,575...121,371,137 		JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sc5d sterol-C5-desaturase involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:7961720 PMID:21873635 RGD:2316911, RGD:13792537 NCBI chr 8:42,629,649...42,641,257
Ensembl chr 8:42,632,672...42,641,273 		JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in ISO
IEA		 (PMID:7508385)
GO_REF:0000107		 RGD
Ensembl		 PMID:7508385 GO_REF:0000107 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372 		JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:1314982|PMID:9826706)		 RGD PMID:9826706 PMID:21873635 MGI:1314982, RGD:13792537 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Cel carboxyl ester lipase involved_in ISO
IEA		 (PMID:12031288)
GO_REF:0000107		 RGD
Ensembl		 PMID:12031288 GO_REF:0000107 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035 		JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000041
(PMID:9660774)		 UniProt
Ensembl
RGD		 PMID:9660774 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551 		JBrowse link
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 acts_upstream_of_or_within ISO (MGI:1859119|PMID:10748047) RGD PMID:10748047 MGI:1859119 NCBI chr 9:17,230,455...17,306,775
Ensembl chr 9:17,230,455...17,306,775 		JBrowse link
G Cyp46a1 cytochrome P450, family 46, subfamily a, polypeptide 1 involved_in IBA
ISO		 PMID:21873635
(MGI:1339884|PMID:10377398), (MGI:6393037|PMID:20193040)
(PMID:14640697), (PMID:18621681), (PMID:25017465)		 RGD PMID:10377398 PMID:14640697 PMID:18621681 PMID:20193040 PMID:25017465 More... MGI:1339884 MGI:6393037, RGD:13792537 NCBI chr 6:127,243,315...127,274,765
Ensembl chr 6:127,243,315...127,274,760 		JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA		 PMID:1694852
(MGI:1933035|PMID:11279518), (MGI:3603484|PMID:15845870)
GO_REF:0000041		 RGD
UniProt		 PMID:11279518 PMID:15845870 PMID:1694852 GO_REF:0000041 MGI:1933035 MGI:3603484, RGD:70534 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688 		JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 IDA RGD PMID:16081591 RGD:1599972 NCBI chr 1:182,411,836...182,415,447
Ensembl chr 1:182,412,151...182,415,442 		JBrowse link
G Mt3 metallothionein 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4881636|PMID:20544854)		 UniProt
RGD		 PMID:20544854 GO_REF:0000024 MGI:4881636 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158 		JBrowse link
G Scarb1 scavenger receptor class B, member 1 acts_upstream_of_or_within ISO MGI:1928989 (MGI:1934548|PMID:11278646), (MGI:3690692|PMID:10559220) RGD PMID:10559220 PMID:11278646 MGI:1934548 MGI:3690692 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647 		JBrowse link
cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07070085.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Abca1 ATP binding cassette subfamily A member 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:14747463)
(MGI:2153573|PMID:11559713)		 RGD PMID:11559713 PMID:14747463 MGI:2153573 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170 		JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25125465)		 UniProt
Ensembl
RGD		 PMID:25125465 GO_REF:0000024 GO_REF:0000107 NCBI chr10:95,240,159...95,309,195
Ensembl chr10:95,240,154...95,308,976 		JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:15994327) RGD PMID:15994327 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948 		JBrowse link
G Angptl3 angiopoietin-like 3 involved_in ISO (PMID:17110602) RGD PMID:17110602 NCBI chr 5:113,703,007...113,710,044
Ensembl chr 5:113,703,012...113,709,957 		JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO MGI:88059 (MGI:3762423|PMID:17920016) RGD PMID:17920016 MGI:3762423 NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within		 ISO (PMID:15464323)
MGI:104663|MGI:104993|MGI:1857127 (MGI:1099137|PMID:9327769), (MGI:1339278|PMID:10357841), (MGI:3487338|PMID:15466405), (MGI:3588626|PMID:15995171), (MGI:3688492|PMID:9795222), (MGI:3696597|PMID:17071966), (MGI:70854|PMID:7751823)		 RGD PMID:7751823 PMID:9327769 PMID:9795222 PMID:10357841 PMID:15464323 More... MGI:1099137 MGI:1339278 MGI:3487338 MGI:3588626 MGI:3688492 MGI:3696597 MGI:70854 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2157148|MGI:96216 (MGI:1339279|PMID:10357838), (MGI:2180727|PMID:8647961)		 RGD PMID:8647961 PMID:10357838 PMID:21873635 MGI:1339279 MGI:2180727, RGD:13792537 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Apoa4 apolipoprotein A4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:1935934)		 Ensembl
RGD		 PMID:1935934 GO_REF:0000107 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469 		JBrowse link
G Apob apolipoprotein B involved_in ISO (PMID:2563166) RGD PMID:2563166 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497 		JBrowse link
G Apoc1 apolipoprotein C1 acts_upstream_of_or_within ISO MGI:2157218 (MGI:70746|PMID:7848292) RGD PMID:7848292 MGI:70746 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375 		JBrowse link
G Apoc3 apolipoprotein C3 acts_upstream_of_or_within ISO MGI:1857128|MGI:3758464 (MGI:2152463|PMID:11590213), (MGI:69667|PMID:8089130), (MGI:82330|PMID:8864964) RGD PMID:8089130 PMID:8864964 PMID:11590213 MGI:2152463 MGI:69667 MGI:82330 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583 		JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2137814 (MGI:2180727|PMID:8647961), (MGI:51330|PMID:1423598)
(PMID:3771793), (PMID:9649566)		 Ensembl
RGD		 PMID:1423598 PMID:3771793 PMID:8647961 PMID:9649566 GO_REF:0000107 MGI:2180727 MGI:51330 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Apof apolipoprotein F involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:3800154 (MGI:5428098|PMID:22363685)		 RGD PMID:22363685 PMID:21873635 MGI:5428098, RGD:13792537 NCBI chr 7:700,688...702,130
Ensembl chr 7:700,762...701,946 		JBrowse link
G Apon apolipoprotein N involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:686,943...688,346
Ensembl chr 7:686,927...688,392 		JBrowse link
G App amyloid beta precursor protein acts_upstream_of_or_within ISO MGI:2136847|MGI:88047 (MGI:3762423|PMID:17920016) RGD PMID:17920016 MGI:3762423 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Cat catalase acts_upstream_of_or_within ISO MGI:3053604 (MGI:53683|PMID:5087482) RGD PMID:5087482 MGI:53683 NCBI chr 3:89,842,393...89,874,577
Ensembl chr 3:89,842,399...89,874,478 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3848341 (MGI:3847596|PMID:18974039)		 Ensembl
RGD		 PMID:18974039 GO_REF:0000107 MGI:3847596 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:16024911) RGD PMID:16024911 NCBI chr19:13,873,490...13,912,035 JBrowse link
G Ch25h cholesterol 25-hydroxylase involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:33239446)
(MGI:1316846|PMID:9852097)		 RGD PMID:9852097 PMID:33239446 PMID:21873635 MGI:1316846, RGD:13792537 NCBI chr 1:232,014,877...232,016,195
Ensembl chr 1:232,014,880...232,016,195 		JBrowse link
G Cln6 CLN6, transmembrane ER protein involved_in ISO (PMID:16857350) RGD PMID:16857350 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:16086686)		 UniProt
RGD		 PMID:16086686 GO_REF:0000024 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Cubn cubilin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 involved_in IBA
ISO
ISS
IEA		 PMID:21873635
(PMID:18182448), (PMID:21636783)
GO_REF:0000024
GO_REF:0000041		 RGD
UniProt		 PMID:18182448 PMID:21636783 PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:13792537 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338 		JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278 		JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004 		JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312 		JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:2175615 PMID:21873635 RGD:1299597, RGD:13792537 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551 		JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 TAS RGD PMID:12029625 RGD:1298868 NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698 		JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within ISO MGI:3027024 (MGI:3614236|PMID:16407971) RGD PMID:16407971 MGI:3614236 NCBI chr 5:121,344,637...121,368,853
Ensembl chr 5:121,344,575...121,371,137 		JBrowse link
G Ebp EBP, cholestenol delta-isomerase involved_in ISO (PMID:10391219) RGD PMID:10391219 NCBI chr  X:14,299,427...14,305,826
Ensembl chr  X:14,299,448...14,305,826 		JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:65,017,654...65,034,184
Ensembl chr16:65,018,532...65,033,671 		JBrowse link
G Fdx1 ferredoxin 1 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:21636783)		 Ensembl
UniProt
RGD		 PMID:21636783 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:52,268,536...52,287,344
Ensembl chr 8:52,268,536...52,287,414 		JBrowse link
G Fdxr ferredoxin reductase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:100,507,863...100,516,649
Ensembl chr10:100,507,865...100,516,658 		JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within ISO MGI:1858114 (MGI:1930023|PMID:11160364) RGD PMID:11160364 MGI:1930023 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348 		JBrowse link
G Fgl1 fibrinogen-like 1 acts_upstream_of_or_within ISO MGI:5510996 (MGI:5505372|PMID:23483972) RGD PMID:23483972 MGI:5505372 NCBI chr16:51,120,652...51,150,907
Ensembl chr16:51,120,694...51,151,093 		JBrowse link
G Gba glucosylceramidase beta involved_in ISO
IEA		 (PMID:24211208), (PMID:26724485)
(MGI:6271235|PMID:24211208)
GO_REF:0000041		 RGD
UniProt		 PMID:24211208 PMID:26724485 GO_REF:0000041 MGI:6271235 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA
ISO
ISS		 GO_REF:0000041
(MGI:5771619|PMID:26724485)
GO_REF:0000024		 UniProt
RGD		 PMID:26724485 GO_REF:0000024 GO_REF:0000041 MGI:5771619 NCBI chr 5:57,822,389...57,834,522
Ensembl chr 5:57,822,389...57,834,072 		JBrowse link
G Hdlbp high density lipoprotein binding protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:93,948,099...94,018,040
Ensembl chr 9:93,949,913...94,018,048 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384427 (MGI:1933035|PMID:11279518) RGD PMID:11279518 MGI:1933035 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 NAS RGD PMID:8913347 RGD:632889 NCBI chr18:43,328,903...43,417,950
Ensembl chr18:43,328,824...43,417,952 		JBrowse link
G Il4 interleukin 4 involved_in ISO (MGI:2178917|PMID:11971948) RGD PMID:11971948 MGI:2178917 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (MGI:3603108|PMID:16100574) RGD PMID:16100574 MGI:3603108 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO MGI:1916289 (MGI:3603108|PMID:16100574) RGD PMID:16100574 MGI:3603108 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923 		JBrowse link
G Lcat lecithin cholesterol acyltransferase acts_upstream_of_or_within
involved_in		 IDA
ISO		 (PMID:10559507)
(PMID:26195816), (PMID:4335615)
(MGI:1096057|PMID:9300780)		 RGD PMID:4335615 PMID:9300780 PMID:10559507 PMID:26195816 PMID:746355 MGI:1096057, RGD:1581789 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857212 (MGI:3696597|PMID:17071966)		 Ensembl
RGD		 PMID:17071966 GO_REF:0000107 MGI:3696597 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580 		JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:146,955,607...146,978,601
Ensembl chr 5:146,955,607...146,978,601 		JBrowse link
G Lep leptin acts_upstream_of_or_within ISO MGI:88049 (MGI:3588626|PMID:15995171) RGD PMID:15995171 MGI:3588626 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Lepr leptin receptor acts_upstream_of_or_within ISO MGI:88049 (MGI:3588626|PMID:15995171) RGD PMID:15995171 MGI:3588626 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908 		JBrowse link
G Lima1 LIM domain and actin binding 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:130,901,717...131,001,573
Ensembl chr 7:130,901,717...131,001,473 		JBrowse link
G Lipc lipase C, hepatic type involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88050 (MGI:1339279|PMID:10357838)		 Ensembl
RGD		 PMID:10357838 GO_REF:0000107 MGI:1339279 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464 		JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:80,965,612...80,984,313
Ensembl chr 1:80,965,627...80,984,310 		JBrowse link
G Lrp1 LDL receptor related protein 1 acts_upstream_of_or_within ISO MGI:2177650|MGI:2180880 (MGI:3762423|PMID:17920016) RGD PMID:17920016 MGI:3762423 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910 		JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO MGI:2448955 (MGI:2448205|PMID:12509515) RGD PMID:12509515 MGI:2448205 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Mbtps1 membrane-bound transcription factor peptidase, site 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:47,561,598...47,612,769
Ensembl chr19:47,561,598...47,612,791 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318 		JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1857776 (MGI:1338572|PMID:10369263)		 RGD PMID:10369263 PMID:21873635 MGI:1338572, RGD:13792537 NCBI chr  X:150,775,034...150,807,161
Ensembl chr  X:150,775,080...150,807,142 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 acts_upstream_of_or_within ISO (MGI:3710922|PMID:17242417) RGD PMID:17242417 MGI:3710922 NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688 		JBrowse link
G Pctp phosphatidylcholine transfer protein acts_upstream_of_or_within ISO MGI:2673156 (MGI:3603484|PMID:15845870) RGD PMID:15845870 MGI:3603484 NCBI chr10:74,808,887...74,856,260
Ensembl chr10:74,808,887...74,849,867 		JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 involved_in ISO
ISS		 (PMID:25035345)
GO_REF:0000024		 RGD
UniProt		 PMID:25035345 GO_REF:0000024 NCBI chr15:24,146,854...24,150,739
Ensembl chr15:24,146,856...24,150,702 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:5616959|PMID:25429154) RGD PMID:25429154 MGI:5616959 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714 		JBrowse link
G Pon1 paraoxonase 1 acts_upstream_of_or_within ISO MGI:2148702 (MGI:1860864|PMID:9685159) RGD PMID:9685159 MGI:1860864 NCBI chr 4:33,294,737...33,325,759
Ensembl chr 4:33,294,722...33,321,360 		JBrowse link
G Scap SREBF chaperone involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(MGI:1934968|PMID:11358865)		 UniProt
RGD		 PMID:11358865 GO_REF:0000024 MGI:1934968 NCBI chr 8:110,306,031...110,360,677
Ensembl chr 8:110,306,031...110,360,666 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 acts_upstream_of_or_within ISO (MGI:5320806|PMID:22383528) RGD PMID:22383528 MGI:5320806 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794 		JBrowse link
G Soat1 sterol O-acyltransferase 1 acts_upstream_of_or_within
involved_in		 TAS
ISO
ISS
IBA
IEA		 (PMID:9756919)
(PMID:16647063), (PMID:8407899)
(MGI:3603484|PMID:15845870)
GO_REF:0000024
PMID:21873635
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:8407899 PMID:9756919 PMID:15845870 PMID:16647063 PMID:9555010 More... GO_REF:0000024 GO_REF:0000107 MGI:3603484, RGD:730254, RGD:13792537 NCBI chr13:68,552,274...68,597,529
Ensembl chr13:68,552,317...68,597,494 		JBrowse link
G Soat2 sterol O-acyltransferase 2 acts_upstream_of_or_within
involved_in		 IDA
ISO
IEA
IBA		 (MGI:1206070|PMID:9756919)
GO_REF:0000107
PMID:21873635
(PMID:11294643), (PMID:16647063)		 RGD
Ensembl		 PMID:9756919 PMID:11294643 PMID:16647063 PMID:12217884 PMID:21873635 GO_REF:0000107 MGI:1206070, RGD:625687, RGD:13792537 NCBI chr 7:133,281,818...133,294,915
Ensembl chr 7:133,281,818...133,294,915 		JBrowse link
G Sqle squalene epoxidase involved_in IMP
IBA		 PMID:21873635 RGD
GO_Central		 PMID:9300786 PMID:21873635 RGD:1625701, RGD:13792537 NCBI chr 7:90,867,973...90,883,623
Ensembl chr 7:90,868,011...90,883,618 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 IMP RGD PMID:18071061 RGD:1643359 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650 		JBrowse link
G Srebf1_v2 sterol regulatory element binding factor 1, variant 2 IMP RGD PMID:18071061 RGD:1643359
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848 		JBrowse link
G Star steroidogenic acute regulatory protein involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672 		JBrowse link
G Sult1c3 sulfotransferase family 1C member 3 involved_in ISO (PMID:28992322) RGD PMID:28992322 NCBI chr 9:7,221,580...7,266,991
Ensembl chr 9:7,221,578...7,267,030 		JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19589875)		 UniProt
RGD		 PMID:19589875 GO_REF:0000024 NCBI chr 1:75,451,178...75,508,142 JBrowse link
G Sult2b1 sulfotransferase family 2B member 1 involved_in ISO
ISS		 (PMID:28575648)
GO_REF:0000024		 RGD
UniProt		 PMID:28575648 GO_REF:0000024 NCBI chr 1:96,200,155...96,261,295
Ensembl chr 1:96,200,156...96,261,295 		JBrowse link
G Tnfsf4 TNF superfamily member 4 acts_upstream_of_or_within ISO (MGI:57200|PMID:3473481) RGD PMID:3473481 MGI:57200 NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:6407480|PMID:31391339)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:31391339 GO_REF:0000024 GO_REF:0000107 MGI:6407480 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588 		JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920 		JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
IEA
ISO		 PMID:19342457
GO_REF:0000107
(PMID:19342457)		 Ensembl
RGD		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376 		JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP PMID:19342457 UniProt PMID:19342457 RGD:4891166 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278 		JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 NOT|involved_in ISO (PMID:9703385)
(PMID:19342457)		 RGD PMID:9703385 PMID:19342457 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048 		JBrowse link
cortisol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338 		JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278 		JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004 		JBrowse link
G Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 involved_in ISO
IEA		 (PMID:8538347)
GO_REF:0000107		 RGD
Ensembl		 PMID:8538347 GO_REF:0000107 NCBI chr19:33,397,656...33,402,899
Ensembl chr19:33,397,656...33,402,899 		JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 IDA RGD PMID:2507189 RGD:11252156 NCBI chr13:92,714,315...92,744,124
Ensembl chr13:92,714,315...92,790,235 		JBrowse link
diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt3 nudix hydrolase 3 involved_in ISO
ISS		 (PMID:10585413)
GO_REF:0000024		 RGD
UniProt		 PMID:10585413 GO_REF:0000024 NCBI chr20:5,634,345...5,686,950
Ensembl chr20:5,634,349...5,686,874 		JBrowse link
diphosphoinositol polyphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt11 nudix hydrolase 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:16,326,775...16,333,396
Ensembl chr  X:16,326,598...16,333,145 		JBrowse link
G Nudt3 nudix hydrolase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,634,345...5,686,950
Ensembl chr20:5,634,349...5,686,874 		JBrowse link
G Nudt4 nudix hydrolase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:30,188,100...30,204,620
Ensembl chr 7:30,188,100...30,204,615 		JBrowse link
dolichol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 involved_in TAS PMID:10806397 UniProt PMID:10806397 RGD:2326086 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821 		JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:25066056)		 RGD PMID:25066056 PMID:21873635 RGD:13792537 NCBI chr20:31,811,817...31,838,562
Ensembl chr20:31,811,817...31,838,561 		JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:32,046,415...32,060,796
Ensembl chr14:32,046,408...32,060,747 		JBrowse link
dolichol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 IDA RGD PMID:8280061 RGD:1624315 NCBI chr 8:44,664,055...44,671,102
Ensembl chr 8:44,664,071...44,671,087 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA		 (PMID:9535917), (PMID:9724629)
(MGI:1329093|PMID:9535917)
PMID:21873635		 RGD PMID:9535917 PMID:9724629 PMID:2844175 PMID:21873635 MGI:1329093, RGD:1601442, RGD:13792537 NCBI chr 3:156,919,979...156,939,522
Ensembl chr 3:156,919,979...156,939,536 		JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in
acts_upstream_of_or_within		 IEA
IDA		 GO_REF:0000104
PMID:9724629		 UniProt PMID:9724629 GO_REF:0000104, RGD:69827 NCBI chr 3:15,855,952...15,858,867 JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:4821529|PMID:20637498)
(PMID:20637498)
GO_REF:0000104		 UniProt
RGD		 PMID:20637498 GO_REF:0000024 GO_REF:0000104 MGI:4821529 NCBI chr14:32,046,415...32,060,796
Ensembl chr14:32,046,408...32,060,747 		JBrowse link
doxorubicin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in ISO (PMID:18276838) RGD PMID:18276838 NCBI chr 5:130,092,945...130,130,277
Ensembl chr 5:130,092,732...130,113,674 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B involved_in ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
G Akr1b10 aldo-keto reductase family 1 member B10 involved_in ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 involved_in IBA
ISO		 PMID:21873635
(PMID:20837989)		 RGD PMID:20837989 PMID:21873635 RGD:13792537 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326 		JBrowse link
G Akr1c14 aldo-keto reductase family 1, member C14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:66,156,286...66,173,277
Ensembl chr17:66,156,288...66,173,277 		JBrowse link
G Akr1c2 aldo-keto reductase family 1, member C2 involved_in IBA
ISO		 PMID:21873635
(PMID:20837989)		 RGD PMID:20837989 PMID:21873635 RGD:13792537 NCBI chr17:65,759,778...65,808,013
Ensembl chr17:65,759,788...65,775,764 		JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in IBA
ISO		 PMID:21873635
(PMID:20837989)		 RGD PMID:20837989 PMID:21873635 RGD:13792537 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873 		JBrowse link
G AKR1C3l1 aldo-keto reductase family 1 member C3-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:65,847,580...65,881,488
Ensembl chr17:65,835,634...65,881,488 		JBrowse link
G Akr7a2 aldo-keto reductase family 7, member A2 involved_in ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 5:151,552,375...151,560,914
Ensembl chr 5:151,552,343...151,560,909 		JBrowse link
G Cbr4 carbonyl reductase 4 involved_in ISO (PMID:20837989) RGD PMID:20837989 NCBI chr16:28,629,928...28,684,230
Ensembl chr16:28,617,224...28,645,712 		JBrowse link
ethanol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1 alcohol dehydrogenase 1 (class I) acts_upstream_of_or_within ISO MGI:2180100 (MGI:1338643|PMID:10358022), (MGI:54726|PMID:518534) RGD PMID:518534 PMID:10358022 MGI:1338643 MGI:54726 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892 		JBrowse link
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide IDA RGD PMID:18207224 RGD:5129089 NCBI chr 2:226,975,184...226,987,591 JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180102 (MGI:1338643|PMID:10358022)		 Ensembl
RGD		 PMID:10358022 GO_REF:0000107 MGI:1338643 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Aldh1a7 aldehyde dehydrogenase family 1, subfamily A7 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:218,201,443...218,241,410
Ensembl chr 1:218,201,472...218,248,906 		JBrowse link
G Aldh1b1 aldehyde dehydrogenase 1 family, member B1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:60,063,370...60,068,378
Ensembl chr 5:60,063,225...60,068,378 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr12:34,949,549...34,982,527 JBrowse link
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:201,145,309...201,162,675
Ensembl chr 1:201,145,309...201,163,921 		JBrowse link
G Sult1a1 sulfotransferase family 1A member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr 1:181,272,022...181,276,750
Ensembl chr 1:181,272,023...181,275,562 		JBrowse link
G Sult1b1 sulfotransferase family 1B member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr14:20,492,763...20,505,491
Ensembl chr14:20,492,708...20,505,483 		JBrowse link
G Sult1e1 sulfotransferase family 1E member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr14:20,422,324...20,439,562
Ensembl chr14:20,422,324...20,439,275 		JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr 1:75,451,178...75,508,142 JBrowse link
ethanol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide acts_upstream_of_or_within ISO (MGI:54726|PMID:518534) RGD PMID:518534 MGI:54726 NCBI chr 2:226,948,717...226,966,747 JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide IDA RGD PMID:10829036 RGD:631904 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP protein:altered expression, altered activity:liver (rat) RGD PMID:28688179 RGD:14981582 NCBI chr12:34,949,549...34,982,527 JBrowse link
ethanol oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1 alcohol dehydrogenase 1 (class I) involved_in IDA
ISO
IBA		 (PMID:6391957)
PMID:21873635		 RGD PMID:6391957 PMID:10094961 PMID:21873635 PMID:1558299 RGD:1642948, RGD:13792537, RGD:1642949 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892 		JBrowse link
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in IDA
IEA
ISO		 GO_REF:0000002
(PMID:16787387)		 InterPro
RGD		 PMID:16787387 PMID:2774584 GO_REF:0000002, RGD:1358222 NCBI chr 2:226,948,717...226,966,747 JBrowse link
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:226,975,184...226,987,591 JBrowse link
G Adh6 alcohol dehydrogenase 6 (class V) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:226,903,208...226,934,564
Ensembl chr 2:226,903,250...226,934,534 		JBrowse link
G Adh6a alcohol dehydrogenase 6A (class V) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:226,823,775...226,846,005
Ensembl chr 2:226,823,730...226,846,003 		JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in ISO
IBA		 (PMID:10969996), (PMID:7876099)
PMID:21873635		 RGD PMID:7876099 PMID:10969996 PMID:21873635 RGD:13792537 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
ethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha IDA RGD PMID:1577786 RGD:61551 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:3793397|PMID:18227059)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:18227059 GO_REF:0000024 GO_REF:0000107 MGI:3793397 NCBI chr 1:173,016,984...173,032,396
Ensembl chr 1:172,954,394...173,032,429 		JBrowse link
farnesol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b10 aldo-keto reductase family 1 member B10 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873 		JBrowse link
galactitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 acts_upstream_of_or_within ISO MGI:2148688 (MGI:1861531|PMID:10915771) RGD PMID:10915771 MGI:1861531 NCBI chr10:101,243,146...101,247,323
Ensembl chr10:101,235,994...101,247,337 		JBrowse link
gentamycin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc34a1 solute carrier family 34 member 1 IEP RGD PMID:11231357 RGD:7243145 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852 		JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IDA
ISO		 PMID:17545671
(MGI:3722000|PMID:17545671)		 RGD PMID:17545671 PMID:17545671 MGI:3722000, RGD:8553472 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Lep leptin IDA RGD PMID:21068181 RGD:5128556 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO
IDA		 (PMID:26755581)
(MGI:5707518|PMID:26755581)		 RGD PMID:26755581 PMID:26755581 MGI:5707518, RGD:10679995 NCBI chr10:13,495,232...13,497,858
Ensembl chr10:13,494,291...13,497,858 		JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO
IDA		 PMID:21873635
MGI:2182390 (MGI:2157262|PMID:11792850)
PMID:4186849		 RGD PMID:11792850 PMID:21873635 PMID:4186849 MGI:2157262, RGD:13792537, RGD:8553288 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,027,891...29,036,729
Ensembl chr15:29,027,894...29,037,283 		JBrowse link
glycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC094212.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:23,647,764...23,655,504 JBrowse link
G Gk glycerol kinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:50,162,089...50,238,707
Ensembl chr  X:50,163,123...50,238,631 		JBrowse link
G Gk2 glycerol kinase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:12,107,071...12,108,923
Ensembl chr14:12,107,020...12,128,473 		JBrowse link
G Gk5 glycerol kinase 5 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:96,682,469...96,751,407
Ensembl chr 8:96,682,470...96,749,166 		JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:41,800,552...41,937,729
Ensembl chr 3:41,801,930...41,936,901 		JBrowse link
G Gykl1 glycerol kinase-like 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:46,124,239...46,125,888
Ensembl chr18:46,124,199...46,127,077 		JBrowse link
G Tkfc triokinase and FMN cyclase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:207,238,230...207,253,035
Ensembl chr 1:207,236,557...207,252,737 		JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,615,283...157,618,813
Ensembl chr 4:157,615,386...157,619,541 		JBrowse link
glycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl3 angiopoietin-like 3 involved_in ISO (PMID:12565906) RGD PMID:12565906 NCBI chr 5:113,703,007...113,710,044
Ensembl chr 5:113,703,012...113,709,957 		JBrowse link
G Coq2 coenzyme Q2, polyprenyltransferase involved_in ISO UniProtKB:P32378 (PMID:15153069) RGD PMID:15153069 NCBI chr14:8,941,429...8,961,418
Ensembl chr14:8,941,461...8,960,891 		JBrowse link
G Coq3 coenzyme Q3 methyltransferase involved_in ISO UniProtKB:P27680 (PMID:10777520) RGD PMID:10777520 NCBI chr 5:35,429,567...35,460,613
Ensembl chr 5:35,429,574...35,460,607 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO MGI:1919192|MGI:3055139 (MGI:5548046|PMID:24177035) RGD PMID:24177035 MGI:5548046 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709 		JBrowse link
G Gk glycerol kinase involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2429928 (MGI:1097749|PMID:9302256), (MGI:3587535|PMID:16105550), (MGI:5051890|PMID:21536471)
(PMID:8499898)		 RGD PMID:8499898 PMID:9302256 PMID:16105550 PMID:21536471 PMID:21873635 MGI:1097749 MGI:3587535 MGI:5051890, RGD:13792537 NCBI chr  X:50,162,089...50,238,707
Ensembl chr  X:50,163,123...50,238,631 		JBrowse link
G Gk2 glycerol kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:12,107,071...12,108,923
Ensembl chr14:12,107,020...12,128,473 		JBrowse link
G Gk5 glycerol kinase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:96,682,469...96,751,407
Ensembl chr 8:96,682,470...96,749,166 		JBrowse link
G Gykl1 glycerol kinase-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:46,124,239...46,125,888
Ensembl chr18:46,124,199...46,127,077 		JBrowse link
G Myof myoferlin acts_upstream_of_or_within ISO MGI:1349385 (MGI:5548046|PMID:24177035) RGD PMID:24177035 MGI:5548046 NCBI chr 1:235,673,666...235,822,413
Ensembl chr 1:235,673,666...235,822,334 		JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266 		JBrowse link
glycerophosphate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO MGI:3692960 (MGI:1927687|PMID:11147825) RGD PMID:11147825 MGI:1927687 NCBI chr 7:130,842,526...130,851,530
Ensembl chr 7:130,844,138...130,851,529 		JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in ISO
ISS		 (PMID:22523093)
(MGI:5582151|PMID:22523093)
GO_REF:0000024		 RGD
ParkinsonsUK-UCL		 PMID:22523093 GO_REF:0000024 MGI:5582151 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in ISO (PMID:18215067) RGD PMID:18215067 NCBI chr 3:121,757,400...121,828,721
Ensembl chr 3:121,771,836...121,828,721 		JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:91,462,781...91,484,057
Ensembl chr 2:91,462,799...91,484,313 		JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:60,834,206...60,867,575
Ensembl chr18:60,834,246...60,865,641 		JBrowse link
G Isyna1 inositol-3-phosphate synthase 1 involved_in IBA
IEA		 PMID:21873635
GO_REF:0000041		 UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr16:18,839,143...18,841,979
Ensembl chr16:18,839,145...18,841,979 		JBrowse link
inositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Miox myo-inositol oxygenase involved_in IEA
IBA
ISS
ISO		 GO_REF:0000104
PMID:21873635
GO_REF:0000024
(PMID:11716759)
(PMID:18364358)		 UniProt
RGD		 PMID:11716759 PMID:18364358 PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr 7:120,405,031...120,407,529
Ensembl chr 7:120,405,031...120,407,537 		JBrowse link
inositol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:91,462,781...91,484,057
Ensembl chr 2:91,462,799...91,484,313 		JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:60,834,206...60,867,575
Ensembl chr18:60,834,246...60,865,641 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within ISO MGI:2152168 (MGI:1314771|PMID:10454357) RGD PMID:10454357 MGI:1314771 NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600 		JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2137311 (MGI:3769075|PMID:17237885)		 Ensembl
RGD		 PMID:17237885 GO_REF:0000107 MGI:3769075 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:17412958)
GO_REF:0000107
PMID:21873635		 UniProt
RGD
Ensembl		 PMID:17412958 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 3:108,284,120...108,327,683
Ensembl chr 3:108,284,120...108,323,428 		JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:98,315,280...98,394,537
Ensembl chr 9:98,315,252...98,390,814 		JBrowse link
G Slc5a3 solute carrier family 5 member 3 acts_upstream_of_or_within ISO MGI:2663787 (MGI:3654617|PMID:16644257), (MGI:3812279|PMID:18675571) RGD PMID:16644257 PMID:18675571 MGI:3654617 MGI:3812279 NCBI chr11:31,313,847...31,316,293
Ensembl chr11:31,295,476...31,318,883 		JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:20011604) RGD PMID:20011604 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:108,693,068...108,737,278 JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:109,483,843...109,510,172
Ensembl chr 8:109,484,310...109,510,166 		JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:11502751)		 RGD PMID:11502751 PMID:21873635 RGD:13792537 NCBI chr20:5,223,863...5,245,443
Ensembl chr20:5,224,120...5,245,428 		JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:3583918 (MGI:3583505|PMID:15939867)		 RGD PMID:15939867 PMID:21873635 MGI:3583505, RGD:13792537 NCBI chr20:17,216,988...17,251,675
Ensembl chr20:17,218,037...17,251,705 		JBrowse link
G Ippk inositol-pentakisphosphate 2-kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:15,190,191...15,235,203
Ensembl chr17:15,190,265...15,229,541 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004 		JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,500,957...82,522,533
Ensembl chr 1:82,500,957...82,522,779 		JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:108,284,120...108,327,683
Ensembl chr 3:108,284,120...108,323,428 		JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:98,315,280...98,394,537
Ensembl chr 9:98,315,252...98,390,814 		JBrowse link
inositol phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntsr1 neurotensin receptor 1 IMP RGD PMID:15707678 RGD:9743914 NCBI chr 3:167,606,215...167,656,377
Ensembl chr 3:167,606,215...167,656,377 		JBrowse link
inositol phosphate dephosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:96,865,634...96,893,506
Ensembl chr13:96,868,580...96,893,503 		JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:17,775,684...17,802,570
Ensembl chr 5:17,772,608...17,802,570 		JBrowse link
G Impa1 inositol monophosphatase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA
IDA		 PMID:21873635
(PMID:17068342)
GO_REF:0000107
(PMID:9462881)		 RGD
Ensembl		 PMID:9462881 PMID:17068342 PMID:21873635 PMID:9462881 GO_REF:0000107, RGD:13792537, RGD:2302240 NCBI chr 2:91,462,781...91,484,057
Ensembl chr 2:91,462,799...91,484,313 		JBrowse link
G Impa2 inositol monophosphatase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
(PMID:17068342)
PMID:21873635		 InterPro
RGD		 PMID:17068342 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr18:60,834,206...60,867,575
Ensembl chr18:60,834,246...60,865,641 		JBrowse link
G Inpp1 inositol polyphosphate-1-phosphatase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:48,688,037...48,717,793
Ensembl chr 9:48,669,901...48,717,793 		JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B acts_upstream_of_or_within IDA PMID:9295334 MGI PMID:9295334 RGD:633135 NCBI chr19:25,920,189...26,670,085
Ensembl chr19:25,925,358...26,280,634 		JBrowse link
G Inpp5a inositol polyphosphate-5-phosphatase A involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:8006039)		 RGD PMID:8006039 PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:194,190,086...194,380,429
Ensembl chr 1:194,190,393...194,380,428 		JBrowse link
G Inpp5b inositol polyphosphate-5-phosphatase B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:136,996,766...137,061,315
Ensembl chr 5:136,996,686...137,061,315 		JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E acts_upstream_of_or_within ISO (MGI:1861829|PMID:10806194) RGD PMID:10806194 MGI:1861829 NCBI chr 3:9,216,776...9,229,539
Ensembl chr 3:9,216,776...9,229,450 		JBrowse link
G Inpp5j inositol polyphosphate-5-phosphatase J involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:78,374,161...78,385,305
Ensembl chr14:78,374,161...78,385,326 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:12536145)		 RGD PMID:12536145 PMID:21873635 RGD:13792537 NCBI chr10:60,474,262...60,495,813
Ensembl chr10:60,475,897...60,496,773 		JBrowse link
G Mtmr2 myotubularin related protein 2 acts_upstream_of_or_within ISO (MGI:3619505|PMID:16399794) RGD PMID:16399794 MGI:3619505 NCBI chr 8:10,617,993...10,670,724
Ensembl chr 8:10,617,993...10,668,172 		JBrowse link
G Mtmr7 myotubularin related protein 7 acts_upstream_of_or_within ISO (MGI:2673068|PMID:12890864) RGD PMID:12890864 MGI:2673068 NCBI chr16:51,641,225...51,732,212
Ensembl chr16:51,641,190...51,732,182 		JBrowse link
G Ocrl OCRL, inositol polyphosphate-5-phosphatase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:127,089,508...127,140,362
Ensembl chr  X:127,089,590...127,140,362 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:9593664) RGD PMID:9593664 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Synj1 synaptojanin 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2179801 (MGI:1346710|PMID:10535736)		 RGD PMID:10535736 PMID:21873635 MGI:1346710, RGD:13792537 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220 		JBrowse link
G Synj2 synaptojanin 2 involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:9388224 PMID:21873635 RGD:69390, RGD:13792537 NCBI chr 1:46,518,594...46,621,919
Ensembl chr 1:46,518,709...46,633,687 		JBrowse link
inositol phosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galr2 galanin receptor 2 IDA RGD PMID:9427506 RGD:69840 NCBI chr10:101,513,689...101,517,176
Ensembl chr10:101,514,471...101,517,176 		JBrowse link
G Grk3 G protein-coupled receptor kinase 3 IMP RGD PMID:17573483 RGD:5685371 NCBI chr12:43,624,778...43,735,375
Ensembl chr12:43,624,897...43,731,262 		JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B IEP RGD PMID:1331748 RGD:9727450 NCBI chr 9:86,735,793...86,756,640
Ensembl chr 9:86,742,102...86,755,108 		JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in ISO
ISS		 (PMID:30624931)
GO_REF:0000024		 RGD
UniProt		 PMID:30624931 GO_REF:0000024 NCBI chr 8:109,483,843...109,510,172
Ensembl chr 8:109,484,310...109,510,166 		JBrowse link
inositol phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ippk inositol-pentakisphosphate 2-kinase involved_in IEA
IBA
ISO
ISS		 GO_REF:0000107
PMID:21873635
(PMID:12084730)
GO_REF:0000024		 Ensembl
RGD
BHF-UCL		 PMID:12084730 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr17:15,190,191...15,235,203
Ensembl chr17:15,190,265...15,229,541 		JBrowse link
G Itpk1 inositol-tetrakisphosphate 1-kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:121,710,750...121,844,501
Ensembl chr 6:121,710,755...121,844,107 		JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C, gamma 1 IMP RGD PMID:16973916 RGD:2299886 NCBI chr 3:149,385,587...149,416,330
Ensembl chr 3:149,385,587...149,416,330 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:85738|PMID:9013981)		 Ensembl
RGD		 PMID:9013981 GO_REF:0000107 MGI:85738 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930 		JBrowse link
G Ptafr platelet-activating factor receptor acts_upstream_of_or_within ISO (MGI:85738|PMID:9013981) RGD PMID:9013981 MGI:85738 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251 		JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) RGD PMID:12641450 NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287 		JBrowse link
inositol trisphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inppl1 inositol polyphosphate phosphatase-like 1 IDA RGD PMID:12933696 RGD:1626126 NCBI chr 1:156,183,043...156,197,500
Ensembl chr 1:156,183,059...156,197,500 		JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in ISO (PMID:30624931) RGD PMID:30624931 NCBI chr20:17,216,988...17,251,675
Ensembl chr20:17,218,037...17,251,705 		JBrowse link
G Itpk1 inositol-tetrakisphosphate 1-kinase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:121,710,750...121,844,501
Ensembl chr 6:121,710,755...121,844,107 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in ISS
ISO		 GO_REF:0000024
(PMID:1654894)		 UniProt
RGD		 PMID:1654894 GO_REF:0000024 NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004 		JBrowse link
G Plcb1 phospholipase C beta 1 IDA RGD PMID:8387502 RGD:11535163 NCBI chr 3:122,059,968...122,772,896
Ensembl chr 3:122,060,031...122,772,869 		JBrowse link
G Plcb3 phospholipase C beta 3 IDA RGD PMID:8387502 RGD:11535163 NCBI chr 1:204,143,257...204,160,384
Ensembl chr 1:204,144,956...204,160,228 		JBrowse link
isocitrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco2 aconitase 2 IDA RGD PMID:14674759 PMID:9712727 RGD:2306852, RGD:2306877 NCBI chr 7:113,385,677...113,428,794
Ensembl chr 7:113,385,646...113,428,261 		JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 involved_in IDA
ISO
IBA
ISS		 (PMID:10521434), (PMID:19935646), (PMID:20171178)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:10521434 PMID:19935646 PMID:20171178 PMID:17447164 PMID:21873635 GO_REF:0000024, RGD:1624966, RGD:13792537 NCBI chr 9:66,534,146...66,563,703
Ensembl chr 9:66,534,146...66,563,708 		JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 involved_in IBA
IEA
ISS		 PMID:21873635
GO_REF:0000002
GO_REF:0000024		 InterPro
UniProt		 PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025 		JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:938457 PMID:21873635 RGD:2306828, RGD:13792537 NCBI chr 8:54,971,694...54,991,085
Ensembl chr 8:54,971,740...54,991,084 		JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:938457 PMID:21873635 RGD:2306828, RGD:13792537 NCBI chr 3:117,481,845...117,486,909
Ensembl chr 3:117,481,845...117,486,982 		JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in IDA
ISS
ISO
IBA		 GO_REF:0000024
(PMID:2605193)
PMID:21873635		 UniProt
RGD		 PMID:2605193 PMID:938457 PMID:21873635 GO_REF:0000024, RGD:2306828, RGD:13792537 NCBI chr  X:151,515,244...151,524,175
Ensembl chr  X:151,515,247...151,524,171 		JBrowse link
G LOC100125384 hypothetical protein LOC100125384 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:100,300,241...100,301,711 JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO (PMID:8487505) RGD PMID:8487505 NCBI chr 3:109,184,697...109,216,133
Ensembl chr 3:109,184,676...109,216,133 		JBrowse link
L-xylitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO (PMID:3365415) RGD PMID:3365415 NCBI chr 3:109,184,697...109,216,133
Ensembl chr 3:109,184,676...109,216,133 		JBrowse link
N-acylethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B acts_upstream_of_or_within ISO (MGI:3695251|PMID:16818490) RGD PMID:16818490 MGI:3695251 NCBI chr15:27,697,384...27,716,013
Ensembl chr15:27,704,113...27,716,966 		JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
(MGI:5295534|PMID:21801852)
(MGI:5790171|PMID:25596343)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21801852 PMID:25596343 GO_REF:0000024 GO_REF:0000107 MGI:5295534 MGI:5790171 NCBI chr 1:173,016,984...173,032,396
Ensembl chr 1:172,954,394...173,032,429 		JBrowse link
G Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:25596343)
(PMID:27637550)
(MGI:6104349|PMID:27637550)
(MGI:5790171|PMID:25596343)
PMID:21873635
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:25596343 PMID:27637550 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5790171 MGI:6104349, RGD:13792537 NCBI chr10:71,840,497...71,883,936
Ensembl chr10:71,840,497...71,883,850 		JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in ISO (PMID:27637550)
(MGI:6104349|PMID:27637550)		 RGD PMID:27637550 MGI:6104349 NCBI chr 1:181,373,505...181,383,063
Ensembl chr 1:181,366,626...181,383,063 		JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in IDA
ISS
ISO		 PMID:22860206
GO_REF:0000024
(PMID:15655246), (PMID:30301806)		 UniProt
RGD		 PMID:15655246 PMID:30301806 PMID:22860206 GO_REF:0000024, RGD:39458030 NCBI chr14:15,777,306...15,796,411
Ensembl chr14:15,777,306...15,796,410 		JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:3695401 (MGI:3044670|PMID:14634025), (MGI:3695251|PMID:16818490)		 RGD PMID:14634025 PMID:16818490 PMID:21873635 MGI:3044670 MGI:3695251, RGD:13792537 NCBI chr 4:13,360,532...13,398,815
Ensembl chr 4:13,361,006...13,398,748 		JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19584291)		 Ensembl
RGD		 PMID:19584291 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) RGD PMID:19584291 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) RGD PMID:16981135 NCBI chr 1:166,237,969...166,281,271
Ensembl chr 1:166,238,238...166,280,590 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
IMP		 (PMID:19342457)
GO_REF:0000107		 RGD
Ensembl		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO (PMID:16549446) RGD PMID:16549446 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO (PMID:15947108) RGD PMID:15947108 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15243130)		 Ensembl
RGD		 PMID:15243130 GO_REF:0000107 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404 		JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in IDA
ISO
IEA		 (PMID:1917954)
GO_REF:0000107		 RGD
Ensembl		 PMID:1917954 PMID:9225228 GO_REF:0000107, RGD:10059686 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr 1:242,921,147...242,956,472
Ensembl chr 1:242,921,152...242,956,394 		JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr16:65,017,654...65,034,184
Ensembl chr16:65,018,532...65,033,671 		JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 acts_upstream_of_or_within ISO (MGI:5490819|PMID:17202134) RGD PMID:17202134 MGI:5490819 NCBI chr17:61,331,669...61,334,285
Ensembl chr17:61,331,669...61,334,285 		JBrowse link
G Sod1 superoxide dismutase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15473258)		 UniProt
RGD		 PMID:15473258 GO_REF:0000024 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249 		JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO
IEA		 (PMID:19584291)
GO_REF:0000107		 RGD
Ensembl		 PMID:19584291 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) RGD PMID:19584291 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) RGD PMID:16981135 NCBI chr 1:166,237,969...166,281,271
Ensembl chr 1:166,238,238...166,280,590 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
IMP		 (PMID:19342457)
GO_REF:0000107		 RGD
Ensembl		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in ISO (PMID:7559487), (PMID:7782310) RGD PMID:7559487 PMID:7782310 NCBI chr14:91,397,015...91,429,693
Ensembl chr14:91,397,019...91,454,131 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:7535379 RGD:7777104 NCBI chr 1:228,409,883...229,638,794 JBrowse link
octopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:10,488,260...10,505,245
Ensembl chr 3:10,488,260...10,505,248 		JBrowse link
G Moxd1 monooxygenase, DBH-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:21,075,124...21,165,348
Ensembl chr 1:21,075,122...21,161,779 		JBrowse link
G Moxd2 monooxygenase, DBH-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:69,724,693...69,733,188
Ensembl chr 4:69,724,239...69,733,299 		JBrowse link
octopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase IMP RGD PMID:11521740 RGD:1625401 NCBI chr 3:10,488,260...10,505,245
Ensembl chr 3:10,488,260...10,505,248 		JBrowse link
phytol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 involved_in ISO
IEA		 (PMID:15110319)
GO_REF:0000107		 RGD
Ensembl		 PMID:15110319 GO_REF:0000107 NCBI chr10:45,928,313...45,949,366
Ensembl chr10:45,908,524...45,949,281 		JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase involved_in ISO
IBA
IEA		 (PMID:16546181)
PMID:21873635
GO_REF:0000107		 RGD
Ensembl		 PMID:16546181 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 9:73,897,877...73,926,511
Ensembl chr 9:73,897,880...73,926,511 		JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in IBA
ISO		 PMID:21873635
(PMID:11356846), (PMID:20068046)		 RGD PMID:11356846 PMID:20068046 PMID:21873635 RGD:13792537 NCBI chr 1:152,504,180...152,606,596
Ensembl chr 1:152,504,186...152,606,591 		JBrowse link
polyol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b10 aldo-keto reductase family 1 member B10 IDA RGD PMID:20709016 RGD:6903952 NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
polyprenol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:146,198,359...146,224,479
Ensembl chr 5:146,197,457...146,224,454 		JBrowse link
polyprenol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISO
ISS
IBA
IEA		 (PMID:20637498)
(MGI:4821529|PMID:20637498)
GO_REF:0000024
PMID:21873635
GO_REF:0000104		 RGD
UniProt		 PMID:20637498 PMID:21873635 GO_REF:0000024 GO_REF:0000104 MGI:4821529, RGD:13792537 NCBI chr14:32,046,415...32,060,796
Ensembl chr14:32,046,408...32,060,747 		JBrowse link
positive regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO (PMID:16527843) RGD PMID:16527843 NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Dab2 DAB adaptor protein 2 IDA RGD PMID:17303656 RGD:7243836 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476 		JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO
IEA		 (PMID:16981135)
GO_REF:0000107		 RGD
Ensembl		 PMID:16981135 GO_REF:0000107 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
positive regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (MGI:3768186|PMID:17916878) RGD PMID:17916878 MGI:3768186 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948 		JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3768186|PMID:17916878)		 Ensembl
RGD		 PMID:17916878 GO_REF:0000107 MGI:3768186 NCBI chr 8:44,611,187...44,629,818
Ensembl chr 8:44,611,187...44,626,881 		JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in IDA PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688 		JBrowse link
G Fdps farnesyl diphosphate synthase IMP RGD PMID:18637708 RGD:2316295 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776 		JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19229075)		 UniProt
RGD		 PMID:19229075 GO_REF:0000024 NCBI chr18:30,686,555...30,772,667
Ensembl chr18:30,686,581...30,772,357 		JBrowse link
G Por cytochrome p450 oxidoreductase IMP RGD PMID:19264869 RGD:2316785 NCBI chr12:20,951,058...20,999,198
Ensembl chr12:20,951,058...20,999,245 		JBrowse link
G Scap SREBF chaperone involved_in ISO (PMID:32322062) RGD PMID:32322062 NCBI chr 8:110,306,031...110,360,677
Ensembl chr 8:110,306,031...110,360,666 		JBrowse link
G Scp2 sterol carrier protein 2 IDA RGD PMID:2554812 RGD:9850260 NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287 		JBrowse link
G Sec14l2 SEC14-like lipid binding 2 IDA RGD PMID:11226224 RGD:727312 NCBI chr14:78,973,805...78,998,480
Ensembl chr14:78,973,808...78,993,788 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:32322062)
(MGI:3623165|PMID:9062341), (MGI:83216|PMID:8833906)
MGI:2177958|MGI:2177959 (MGI:1098057|PMID:9329978), (MGI:3603730|PMID:16046411)
GO_REF:0000024		 RGD
UniProt		 PMID:8833906 PMID:9062341 PMID:9329978 PMID:16046411 PMID:32322062 GO_REF:0000024 MGI:1098057 MGI:3603730 MGI:3623165 MGI:83216 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32322062)		 UniProt
RGD		 PMID:32322062 GO_REF:0000024 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848 		JBrowse link
positive regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D involved_in ISO (PMID:16971496) RGD PMID:16971496 NCBI chr19:13,873,490...13,912,035 JBrowse link
positive regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16981135)		 Ensembl
RGD		 PMID:16981135 GO_REF:0000107 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I IDA RGD PMID:8943280 RGD:2315982 NCBI chr 4:84,593,558...84,642,700
Ensembl chr 4:84,593,892...84,642,700 		JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:9322919) RGD PMID:9322919 NCBI chr13:43,046,960...43,057,110
Ensembl chr13:43,046,267...43,057,792 		JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) RGD PMID:8376943 NCBI chr13:84,018,887...84,036,612
Ensembl chr13:84,020,095...84,036,100 		JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor IDA RGD PMID:1332507 RGD:2316794 NCBI chr 1:47,879,956...47,911,500
Ensembl chr 1:47,880,309...47,911,709 		JBrowse link
G Ntsr1 neurotensin receptor 1 IMP RGD PMID:11861328 RGD:9743897 NCBI chr 3:167,606,215...167,656,377
Ensembl chr 3:167,606,215...167,656,377 		JBrowse link
G Ptafr platelet-activating factor receptor IDA RGD PMID:8798508 RGD:9999203 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251 		JBrowse link
G Pth parathyroid hormone involved_in ISO (PMID:11604398) RGD PMID:11604398 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530 		JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in IDA PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chr 8:110,693,910...110,725,458
Ensembl chr 8:110,697,485...110,719,729 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:15641770) RGD PMID:15641770 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15705806)		 UniProt
Ensembl
RGD		 PMID:15705806 GO_REF:0000024 GO_REF:0000107 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889 		JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in IEA
ISO		 GO_REF:0000107
(MGI:5318037|PMID:10493819)		 Ensembl
RGD		 PMID:10493819 GO_REF:0000107 MGI:5318037 NCBI chr 6:5,661,871...5,728,109
Ensembl chr 6:5,661,871...5,724,521 		JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:20068007 RGD:6902910 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457 		JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in IDA PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chr 2:145,241,975...145,248,186
Ensembl chr 2:145,241,849...145,248,457 		JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO (PMID:8670200) RGD PMID:8670200 NCBI chr 1:155,295,110...155,330,610
Ensembl chr 1:155,295,111...155,330,808 		JBrowse link
G Plcd1 phospholipase C, delta 1 IMP RGD PMID:16709602 RGD:2300424 NCBI chr 8:118,795,196...118,818,186
Ensembl chr 8:118,795,201...118,818,186 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO MGI:1856024|MGI:1856025 (MGI:2135699|PMID:11371619) RGD PMID:11371619 MGI:2135699 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801 		JBrowse link
protein deglycation, glyoxal removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(PMID:25416785)		 Ensembl
RGD		 PMID:25416785 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcn2 chloride voltage-gated channel 2 involved_in ISO
ISS		 (PMID:29403011)
GO_REF:0000024		 RGD
UniProt		 PMID:29403011 GO_REF:0000024 NCBI chr11:80,197,741...80,211,657
Ensembl chr11:80,198,153...80,211,657 		JBrowse link
regulation of aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3050114 (MGI:3693138|PMID:17122062) RGD PMID:17122062 MGI:3693138 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198 		JBrowse link
regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 NOT|involved_in ISO (PMID:21810484) RGD PMID:21810484 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537 		JBrowse link
G Apob apolipoprotein B acts_upstream_of_or_within ISO MGI:2183298 (MGI:3652707|PMID:16455790) RGD PMID:16455790 MGI:3652707 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497 		JBrowse link
G Cyp51 cytochrome P450, family 51 TAS RGD PMID:7665087 RGD:1298863 NCBI chr 4:30,036,956...30,055,410
Ensembl chr 4:30,036,865...30,055,410 		JBrowse link
G Dhcr7 7-dehydrocholesterol reductase IDA RGD PMID:10329655 RGD:632010 NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6278041|PMID:29395055)		 UniProt
RGD		 PMID:29395055 GO_REF:0000024 MGI:6278041 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880 		JBrowse link
G Mvk mevalonate kinase NAS RGD PMID:2158094 RGD:728935 NCBI chr12:42,141,391...42,158,858
Ensembl chr12:42,141,384...42,158,882 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO MGI:2180128 (MGI:3027293|PMID:14673138) RGD PMID:14673138 MGI:3027293 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404 		JBrowse link
G Scap SREBF chaperone acts_upstream_of_or_within ISO MGI:2148743|MGI:2180899 (MGI:3770209|PMID:16054043) RGD PMID:16054043 MGI:3770209 NCBI chr 8:110,306,031...110,360,677
Ensembl chr 8:110,306,031...110,360,666 		JBrowse link
regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (MGI:3526480|PMID:15639194) RGD PMID:15639194 MGI:3526480 NCBI chr 9:68,333,981...68,372,149
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in IEA
ISO		 GO_REF:0000107
(MGI:3526480|PMID:15639194)		 Ensembl
RGD		 PMID:15639194 GO_REF:0000107 MGI:3526480 NCBI chr10:54,732,875...54,738,102
Ensembl chr10:54,732,469...54,738,075 		JBrowse link
G Apoe apolipoprotein E involved_in ISO UniProtKB:P35951 (PMID:24412220) RGD PMID:24412220 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in
acts_upstream_of_or_within		 ISO (PMID:20663892)
(MGI:4849624|PMID:20663892)		 RGD PMID:20663892 MGI:4849624 NCBI chr19:52,692,337...52,704,156
Ensembl chr19:52,692,337...52,704,156 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 IMP RGD PMID:17526931 RGD:10400884 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISO (PMID:24369117) RGD PMID:24369117 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131 		JBrowse link
G Ephx2 epoxide hydrolase 2 involved_in ISO
IEA		 (PMID:18974052)
(MGI:3829349|PMID:18974052)
GO_REF:0000107		 RGD
Ensembl		 PMID:18974052 GO_REF:0000107 MGI:3829349 NCBI chr15:40,289,901...40,327,632
Ensembl chr15:40,289,902...40,327,615 		JBrowse link
G Fmo5 flavin containing dimethylaniline monoxygenase 5 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5648738|PMID:26049045)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:26049045 GO_REF:0000024 GO_REF:0000107 MGI:5648738 NCBI chr 2:185,197,184...185,249,699
Ensembl chr 2:185,222,204...185,249,693 		JBrowse link
G Gnb3 G protein subunit beta 3 involved_in ISO UniProtKB:Q61011 (PMID:29206867) RGD PMID:29206867 NCBI chr 4:157,639,468...157,645,171
Ensembl chr 4:157,639,469...157,645,173 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P02649 (MGI:5575733|PMID:24412220)		 Ensembl
RGD		 PMID:24412220 GO_REF:0000107 MGI:5575733 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580 		JBrowse link
G Lmf1 lipase maturation factor 1 acts_upstream_of_or_within ISO MGI:1856820 (MGI:55554|PMID:6857276) RGD PMID:6857276 MGI:55554 NCBI chr10:14,597,726...14,684,071
Ensembl chr10:14,597,594...14,684,119 		JBrowse link
G Por cytochrome p450 oxidoreductase IMP RGD PMID:19264869 RGD:2316785 NCBI chr12:20,951,058...20,999,198
Ensembl chr12:20,951,058...20,999,245 		JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5568548 (MGI:5563627|PMID:22837305)		 Ensembl
RGD		 PMID:22837305 GO_REF:0000107 MGI:5563627 NCBI chr 6:122,952,552...122,967,271
Ensembl chr 6:122,952,552...122,967,271 		JBrowse link
G Thrb thyroid hormone receptor beta IMP RGD PMID:17878314 RGD:2315101 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916 		JBrowse link
G Ttc39b tetratricopeptide repeat domain 39B involved_in ISS
ISO
IBA		 GO_REF:0000024
(MGI:5800596|PMID:27383786)
PMID:21873635		 UniProt
RGD		 PMID:27383786 PMID:21873635 GO_REF:0000024 MGI:5800596, RGD:13792537 NCBI chr 5:97,603,329...97,708,103
Ensembl chr 5:97,609,392...97,736,270 		JBrowse link
G Ttc39d tetratricopeptide repeat domain 39D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:14,802,753...14,811,516
Ensembl chr 6:14,786,089...14,811,978 		JBrowse link
regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgkq diacylglycerol kinase, theta involved_in ISO (PMID:24369117) RGD PMID:24369117 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131 		JBrowse link
G H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) involved_in ISO (PMID:18628520), (PMID:23132696)
(MGI:3623644|PMID:16356929)		 RGD PMID:16356929 PMID:18628520 PMID:23132696 MGI:3623644 NCBI chr 5:160,434,499...160,470,203
Ensembl chr 5:160,438,697...160,470,171 		JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptk2b protein tyrosine kinase 2 beta involved_in ISS
ISO		 GO_REF:0000024
(MGI:3583523|PMID:12960403)		 UniProt
RGD		 PMID:12960403 GO_REF:0000024 MGI:3583523 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
retinol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1 alcohol dehydrogenase 1 (class I) involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2180099|MGI:2180100|MGI:97876 (MGI:1338643|PMID:10358022), (MGI:2675573|PMID:12851412), (MGI:3510590|PMID:15193143)		 RGD PMID:10358022 PMID:12851412 PMID:15193143 PMID:21873635 MGI:1338643 MGI:2675573 MGI:3510590, RGD:13792537 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892 		JBrowse link
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in ISS
ISO		 GO_REF:0000024
(PMID:16787387), (PMID:17279314)		 UniProt
RGD		 PMID:16787387 PMID:17279314 GO_REF:0000024 NCBI chr 2:226,948,717...226,966,747 JBrowse link
G Adh6 alcohol dehydrogenase 6 (class V) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:226,903,208...226,934,564
Ensembl chr 2:226,903,250...226,934,534 		JBrowse link
G Adh6a alcohol dehydrogenase 6A (class V) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:226,823,775...226,846,005
Ensembl chr 2:226,823,730...226,846,003 		JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide acts_upstream_of_or_within
involved_in		 IDA
ISO
IEA
IBA		 MGI:2180102 (MGI:1338643|PMID:10358022), (MGI:1340177|PMID:10402668)
GO_REF:0000107
PMID:21873635		 RGD
Ensembl		 PMID:10358022 PMID:10402668 PMID:10829036 PMID:21873635 GO_REF:0000107 MGI:1338643 MGI:1340177, RGD:631904, RGD:13792537 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
G Akr1b10 aldo-keto reductase family 1 member B10 IDA RGD PMID:20709016 RGD:6903952 NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2667220 (MGI:2675573|PMID:12851412)
GO_REF:0000041		 Ensembl
RGD
UniProt		 PMID:12851412 GO_REF:0000041 GO_REF:0000107 MGI:2675573 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Awat2 acyl-CoA wax alcohol acyltransferase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:65,482,240...65,490,500
Ensembl chr  X:65,481,929...65,527,625 		JBrowse link
G Bco1 beta-carotene oxygenase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101 		JBrowse link
G Cel carboxyl ester lipase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035 		JBrowse link
G Ces1d carboxylesterase 1D involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:13,873,490...13,912,035 JBrowse link
G Ces1e carboxylesterase 1E involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:13,833,154...13,869,627 JBrowse link
G Ces1f carboxylesterase 1F involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:13,796,623...13,822,113 JBrowse link
G Ces2a carboxylesterase 2A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:129,428...136,480
Ensembl chr19:129,428...136,480 		JBrowse link
G Ces2c carboxylesterase 2C involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:260,391,190...260,398,757
Ensembl chr 1:260,388,902...260,398,790 		JBrowse link
G Ces2e carboxylesterase 2E involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:157,447...172,822
Ensembl chr19:157,407...172,856 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000041
(PMID:10681376)		 UniProt
RGD		 PMID:10681376 GO_REF:0000024 GO_REF:0000041 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125 		JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 involved_in IEA
ISS
ISO		 GO_REF:0000041
GO_REF:0000024
(PMID:10681376)		 UniProt
RGD		 PMID:10681376 GO_REF:0000024 GO_REF:0000041 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in IEA
ISO
ISS		 GO_REF:0000002
(MGI:5572883|PMID:15258110)
GO_REF:0000041
(PMID:10681376), (PMID:15258110)
GO_REF:0000107
GO_REF:0000024		 InterPro
RGD
UniProt
Ensembl		 PMID:10681376 PMID:15258110 GO_REF:0000002 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 MGI:5572883 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 involved_in ISO (PMID:10681376) RGD PMID:10681376 NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759 		JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794 		JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in ISO (PMID:10681376) RGD PMID:10681376 NCBI chr12:9,207,986...9,230,038
Ensembl chr12:9,015,383...9,285,008 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:108,223,860...108,235,413
Ensembl chr 7:108,218,524...108,234,299 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Dhrs13 dehydrogenase/reductase 13 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:62,920,743...62,925,952 JBrowse link
G Dhrs3 dehydrogenase/reductase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:156,747,939...156,782,420
Ensembl chr 5:156,747,962...156,782,417 		JBrowse link
G Dhrs4 dehydrogenase/reductase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:28,966,544...28,978,135
Ensembl chr15:28,966,553...28,978,127 		JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:80,965,612...80,984,313
Ensembl chr 1:80,965,627...80,984,310 		JBrowse link
G Lrat lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA		 (MGI:6414681|PMID:28758396)
MGI:3038935|MGI:97879 (MGI:3775853|PMID:18093970)
(PMID:10819989)
GO_REF:0000041
GO_REF:0000002		 RGD
UniProt
InterPro		 PMID:10819989 PMID:18093970 PMID:28758396 PMID:2253789 PMID:14642897 More... GO_REF:0000002 GO_REF:0000041 MGI:3775853 MGI:6414681, RGD:1599829, RGD:6484737, RGD:1599832, RGD:1599831 NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619 		JBrowse link
G Plb1 phospholipase B1 IDA RGD PMID:8117729 RGD:6903951 NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117 		JBrowse link
G Pnlip pancreatic lipase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:257,774,012...257,811,656
Ensembl chr 1:257,798,581...257,811,654 		JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:196,552,723...196,557,805
Ensembl chr 1:196,552,723...196,557,805 		JBrowse link
G Pnpla4 patatin like phospholipase domain containing 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:42,313,554...42,318,451
Ensembl chr  X:42,305,373...42,318,552 		JBrowse link
G Rbp1 retinol binding protein 1 acts_upstream_of_or_within IDA
ISO		 MGI:2181412|MGI:87921 (MGI:3510590|PMID:15193143), (MGI:3575475|PMID:15765518) RGD PMID:15193143 PMID:15765518 PMID:14642897 MGI:3510590 MGI:3575475, RGD:6484737 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743 		JBrowse link
G Rbp2 retinol binding protein 2 TAS RGD PMID:3029082 RGD:729693 NCBI chr 8:99,079,293...99,104,489
Ensembl chr 8:99,079,104...99,104,473 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:10232633)
MGI:1891259 (MGI:3775853|PMID:18093970)		 RGD PMID:10232633 PMID:18093970 MGI:3775853 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in ISO
IEA		 (PMID:19458327)
GO_REF:0000041		 RGD
UniProt		 PMID:19458327 GO_REF:0000041 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in ISO (MGI:6189614|PMID:29567832) RGD PMID:29567832 MGI:6189614 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252 		JBrowse link
G Rdh12 retinol dehydrogenase 12 involved_in ISO (PMID:12226107)
(MGI:5442470|PMID:22621924)		 RGD PMID:12226107 PMID:22621924 MGI:5442470 NCBI chr 6:98,015,465...98,028,388
Ensembl chr 6:98,015,465...98,028,388 		JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908 		JBrowse link
G Rdh14 retinol dehydrogenase 14 acts_upstream_of_or_within
involved_in		 ISO (MGI:5618338|PMID:25533474)
(MGI:6271140|PMID:12226107)		 RGD PMID:12226107 PMID:25533474 MGI:5618338 MGI:6271140 NCBI chr 6:33,156,569...33,161,712
Ensembl chr 6:33,156,569...33,161,712 		JBrowse link
G Rdh16 retinol dehydrogenase 16 involved_in IDA
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:7499345 GO_REF:0000041, RGD:1299624 NCBI chr 7:63,616,724...63,624,120
Ensembl chr 7:63,597,536...63,624,124 		JBrowse link
G Rdh7 retinol dehydrogenase 7 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:63,676,016...63,689,375 JBrowse link
G Rdh8 retinol dehydrogenase 8 acts_upstream_of_or_within ISO (MGI:3584232|PMID:15755727) RGD PMID:15755727 MGI:3584232 NCBI chr 8:19,353,191...19,360,462
Ensembl chr 8:19,353,191...19,360,462 		JBrowse link
G Retsat retinol saturase involved_in ISS
ISO
IBA
IEA		 PMID:15358783
(MGI:3522397|PMID:15358783)
PMID:21873635
GO_REF:0000107		 RGD
Ensembl		 PMID:15358783 PMID:15358783 PMID:21873635 GO_REF:0000107 MGI:3522397, RGD:8553455, RGD:13792537 NCBI chr 4:104,653,306...104,662,069
Ensembl chr 4:104,653,155...104,668,310 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IDA RGD PMID:3603006 RGD:9585656 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 involved_in IBA
ISO		 PMID:21873635
(PMID:18926804), (PMID:19102727)		 RGD PMID:18926804 PMID:19102727 PMID:21873635 RGD:13792537 NCBI chr 5:17,018,813...17,043,974
Ensembl chr 5:17,018,813...17,040,970 		JBrowse link
G Ttr transthyretin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:11,941,791...11,951,008
Ensembl chr18:11,943,789...11,951,008 		JBrowse link
sorbitol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B IMP RGD PMID:6690344 PMID:21376710 RGD:1626096, RGD:8548687 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO
IBA		 (PMID:12962626), (PMID:32367058), (PMID:3365415), (PMID:6870831), (PMID:8487505)
PMID:21873635		 RGD PMID:3365415 PMID:6870831 PMID:8487505 PMID:12962626 PMID:32367058 More... RGD:13792537 NCBI chr 3:109,184,697...109,216,133
Ensembl chr 3:109,184,676...109,216,133 		JBrowse link
sorbitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase acts_upstream_of_or_within ISO (MGI:55679|PMID:6626150), (MGI:60299|PMID:722274) RGD PMID:722274 PMID:6626150 MGI:55679 MGI:60299 NCBI chr 3:109,184,697...109,216,133
Ensembl chr 3:109,184,676...109,216,133 		JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within ISO MGI:3815115 (MGI:3846467|PMID:19416652) RGD PMID:19416652 MGI:3846467 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1098386|PMID:9363775)
GO_REF:0000107		 RGD
Ensembl		 PMID:9363775 GO_REF:0000107 MGI:1098386 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542 		JBrowse link
sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Degs2 delta(4)-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
SGD:S000002705 (MGI:3505861|PMID:11937514)
(MGI:3694278|PMID:16571104)		 RGD PMID:11937514 PMID:16571104 PMID:21873635 MGI:3505861 MGI:3694278, RGD:13792537 NCBI chr 6:127,596,063...127,613,293
Ensembl chr 6:127,596,071...127,613,293 		JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:26510981)
GO_REF:0000107		 RGD
Ensembl		 PMID:26510981 GO_REF:0000107 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537 		JBrowse link
G Acer1 alkaline ceramidase 1 involved_in ISO (PMID:17713573), (PMID:20207939), (PMID:20628055)
(MGI:5800647|PMID:27126290), (MGI:6107252|PMID:29056331)		 RGD PMID:17713573 PMID:20207939 PMID:20628055 PMID:27126290 PMID:29056331 MGI:5800647 MGI:6107252 NCBI chr 9:1,792,790...1,824,434
Ensembl chr 9:1,793,139...1,824,434 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in ISO (PMID:16940153), (PMID:20089856), (PMID:20207939), (PMID:20628055)
(MGI:6116621|PMID:29401619)		 RGD PMID:16940153 PMID:20089856 PMID:20207939 PMID:20628055 PMID:29401619 MGI:6116621 NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in ISO (PMID:20068046), (PMID:20207939), (PMID:26792856)
(MGI:5749603|PMID:26474409)		 RGD PMID:20068046 PMID:20207939 PMID:26474409 PMID:26792856 MGI:5749603 NCBI chr 1:152,504,180...152,606,596
Ensembl chr 1:152,504,186...152,606,591 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:1267186|PMID:9653654)
(PMID:10610716), (PMID:12815059)		 UniProt
Ensembl
RGD		 PMID:9653654 PMID:10610716 PMID:12815059 GO_REF:0000024 GO_REF:0000107 MGI:1267186 NCBI chr16:50,966,404...50,997,827
Ensembl chr16:50,966,229...51,008,233 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IDA
ISO
IBA		 PMID:15123644
(MGI:3608219|PMID:16126722), (MGI:3640407|PMID:16380386), (MGI:6275120|PMID:10652340)
PMID:15217782
PMID:21873635
(PMID:30154232)
PMID:10488143		 RGD PMID:10652340 PMID:16126722 PMID:16380386 PMID:30154232 PMID:15123644 More... MGI:3608219 MGI:3640407 MGI:6275120, RGD:13838793, RGD:13838794, RGD:13792537, RGD:13838800 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162 		JBrowse link
G Gba glucosylceramidase beta involved_in ISO (PMID:19279011) RGD PMID:19279011 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO
IEA
IBA		 UniProtKB:Q9NRA0 (PMID:23106337)
GO_REF:0000107
PMID:21873635		 RGD
Ensembl		 PMID:23106337 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO
IBA		 UniProtKB:Q9NYA1 (PMID:23106337)
PMID:21873635		 RGD PMID:23106337 PMID:21873635 RGD:13792537 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391 		JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:19416851), (PMID:33558761)
MGI:3815115 (MGI:3814228|PMID:16216550)		 RGD PMID:16216550 PMID:19416851 PMID:33558761 PMID:21873635 MGI:3814228, RGD:13792537 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 PMID:21873635
GO_REF:0000107
(PMID:19416851), (PMID:33558761)
MGI:3815117 (MGI:3814228|PMID:16216550)		 Ensembl
RGD		 PMID:16216550 PMID:19416851 PMID:33558761 PMID:21873635 GO_REF:0000107 MGI:3814228, RGD:13792537 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542 		JBrowse link
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 involved_in IBA
ISO		 PMID:21873635
(PMID:19416851)		 RGD PMID:19416851 PMID:21873635 RGD:13792537 NCBI chr 3:126,847,878...126,978,010
Ensembl chr 3:126,847,878...126,978,010 		JBrowse link
G Sptssa serine palmitoyltransferase, small subunit A involved_in ISO (PMID:19416851), (PMID:33558761) RGD PMID:19416851 PMID:33558761 NCBI chr 6:72,144,714...72,156,130
Ensembl chr 6:72,144,714...72,156,214 		JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B involved_in ISO (PMID:19416851) RGD PMID:19416851 NCBI chr 2:154,133,728...154,162,127
Ensembl chr 2:154,133,733...154,163,120 		JBrowse link
sphingosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO
ISS		 (PMID:10781606), (PMID:15946935), (PMID:16229686), (PMID:17475390), (PMID:26190575)
GO_REF:0000024		 RGD
UniProt		 PMID:10781606 PMID:15946935 PMID:16229686 PMID:17475390 PMID:26190575 GO_REF:0000024 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162 		JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in ISO
ISS		 (PMID:15655246)
GO_REF:0000024		 RGD
UniProt		 PMID:15655246 GO_REF:0000024 NCBI chr14:15,777,306...15,796,411
Ensembl chr14:15,777,306...15,796,410 		JBrowse link
G Plpp1 phospholipid phosphatase 1 involved_in IEA
ISO
IDA		 GO_REF:0000107
(MGI:6383560|PMID:10359651)
PMID:8663293
(PMID:9705349)		 Ensembl
RGD		 PMID:9705349 PMID:10359651 PMID:8663293 PMID:10359651 GO_REF:0000107 MGI:6383560, RGD:15090855, RGD:15090857 NCBI chr 2:44,439,002...44,500,430
Ensembl chr 2:44,438,994...44,501,268 		JBrowse link
G Plpp2 phospholipid phosphatase 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9705349)		 UniProt
RGD		 PMID:9705349 GO_REF:0000024 NCBI chr 7:10,175,918...10,184,032
Ensembl chr 7:10,175,948...10,184,071 		JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in ISO
ISS		 (PMID:9305923), (PMID:9705349)
GO_REF:0000024		 RGD
UniProt		 PMID:9305923 PMID:9705349 GO_REF:0000024 NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205 		JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 PMID:21873635
GO_REF:0000107
(MGI:2176350|PMID:11756451)		 Ensembl
RGD		 PMID:11756451 PMID:21873635 GO_REF:0000107 MGI:2176350, RGD:13792537 NCBI chr 6:94,425,339...94,446,534
Ensembl chr 6:94,425,339...94,446,534 		JBrowse link
G Sgpp2 sphingosine-1-phosphate phosphatase 2 involved_in ISO
IBA		 (PMID:12411432)
PMID:21873635		 RGD PMID:12411432 PMID:21873635 RGD:13792537 NCBI chr 9:79,762,658...79,884,665
Ensembl chr 9:79,763,284...79,880,457 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO
ISS		 (PMID:20577214)
GO_REF:0000024		 RGD
UniProt		 PMID:20577214 GO_REF:0000024 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:3703830|PMID:17346996)
MGI:3580701 (MGI:3608224|PMID:16093248)		 RGD PMID:16093248 PMID:17346996 MGI:3608224 MGI:3703830 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391 		JBrowse link
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in ISO (PMID:23707606)
(MGI:5645206|PMID:19666465)		 RGD PMID:19666465 PMID:23707606 MGI:5645206 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in TAS
IBA
ISO		 PMID:21873635
(PMID:17101830), (PMID:19666465), (PMID:7678411), (PMID:9445252)		 RGD PMID:7678411 PMID:9445252 PMID:17101830 PMID:19666465 PMID:12051753 More... RGD:625450, RGD:13792537 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698 		JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:29,037,545...29,044,322
Ensembl chr20:28,953,864...29,044,292
Ensembl chr20:28,953,864...29,044,292 		JBrowse link
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:8,845,161...8,896,343 JBrowse link
G Pts 6-pyruvoyl-tetrahydropterin synthase acts_upstream_of_or_within
involved_in		 TAS
ISO
IEA		 (MGI:1328867|PMID:9894812)
GO_REF:0000041		 RGD
UniProt		 PMID:9894812 PMID:1939130 GO_REF:0000041 MGI:1328867, RGD:68294 NCBI chr 8:50,870,838...50,877,878
Ensembl chr 8:50,870,841...50,877,869 		JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in TAS
IBA
IMP
IDA		 PMID:21873635
PMID:1898002		 RGD
GO_Central
UniProt		 PMID:3680258 PMID:21873635 PMID:1898002 PMID:9235988 PMID:660556 RGD:729701, RGD:13792537, RGD:8553309, RGD:5128582, RGD:4139903 NCBI chr14:65,670,251...65,683,853
Ensembl chr14:65,670,131...65,683,854 		JBrowse link
G RGD1560795 similar to Sepiapterin reductase (SPR) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:117,689,458...117,693,286
Ensembl chr 4:117,689,458...117,692,891 		JBrowse link
G Spr sepiapterin reductase involved_in TAS
IBA
IMP		 PMID:21873635 RGD
GO_Central		 PMID:2201030 PMID:21873635 PMID:2179471 RGD:70022, RGD:13792537, RGD:1600056 NCBI chr 4:117,671,948...117,676,292
Ensembl chr 4:117,671,949...117,675,678 		JBrowse link
tetrahydrobiopterin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spr sepiapterin reductase acts_upstream_of_or_within ISO MGI:3757641 (MGI:3722569|PMID:16532389) RGD PMID:16532389 MGI:3722569 NCBI chr 4:117,671,948...117,676,292
Ensembl chr 4:117,671,949...117,675,678 		JBrowse link
thiamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp3 acid phosphatase 3 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3849266|PMID:18940592)		 Ensembl
RGD		 PMID:18940592 GO_REF:0000107 MGI:3849266 NCBI chr 8:104,905,570...104,956,146
Ensembl chr 8:104,905,586...104,954,236 		JBrowse link
G Thtpa thiamine triphosphatase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580 		JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 acts_upstream_of_or_within ISO (MGI:1350425|PMID:10567383) RGD PMID:10567383 MGI:1350425 NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694 		JBrowse link
vitamin D3 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079 (MGI:6282476|PMID:28798354) RGD PMID:28798354 MGI:6282476 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95525 (MGI:5548021|PMID:24259513) RGD PMID:24259513 MGI:5548021 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO MGI:95522 (MGI:5548021|PMID:24259513) RGD PMID:24259513 MGI:5548021 NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242 		JBrowse link
G Ugt1a2 UDP glucuronosyltransferase 1 family, polypeptide A2 involved_in ISO (PMID:23756265) RGD PMID:23756265 NCBI chr 9:88,791,216...88,808,465 JBrowse link
G Ugt1a3 UDP glycosyltransferase 1 family, polypeptide A3 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 9:88,780,328...88,808,465 JBrowse link
G Ugt1a5 UDP glucuronosyltransferase family 1 member A5 involved_in ISO (PMID:18177842), (PMID:24641623) RGD PMID:18177842 PMID:24641623 NCBI chr 9:88,762,250...88,808,465 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      small molecule metabolic process 1804
        alcohol metabolic process 371
          3-(3-hydroxy)phenylpropionate metabolic process + 0
          3-hydroxybenzyl alcohol metabolic process 0
          alcohol biosynthetic process + 150
          alcohol catabolic process + 55
          cellular alcohol metabolic process + 4
          cyclopentanol metabolic process + 0
          ethanolamine-containing compound metabolic process + 10
          fatty alcohol metabolic process + 2
          fonsecin metabolic process + 0
          monensin A metabolic process + 0
          polyol metabolic process + 123
          polyprenol metabolic process + 9
          prenol metabolic process + 0
          primary alcohol metabolic process + 102
          secondary alcohol metabolic process + 158
          tertiary alcohol metabolic process + 23
Path 2
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      organic substance metabolic process 11355
        organic hydroxy compound metabolic process 563
          alcohol metabolic process 371
            3-(3-hydroxy)phenylpropionate metabolic process + 0
            3-hydroxybenzyl alcohol metabolic process 0
            alcohol biosynthetic process + 150
            alcohol catabolic process + 55
            cellular alcohol metabolic process + 4
            cyclopentanol metabolic process + 0
            ethanolamine-containing compound metabolic process + 10
            fatty alcohol metabolic process + 2
            fonsecin metabolic process + 0
            monensin A metabolic process + 0
            polyol metabolic process + 123
            polyprenol metabolic process + 9
            prenol metabolic process + 0
            primary alcohol metabolic process + 102
            secondary alcohol metabolic process + 158
            tertiary alcohol metabolic process + 23
paths to the root