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ONTOLOGY REPORT - ANNOTATIONS


Term:tricarboxylic acid metabolic process
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Accession:GO:0072350 term browser browse the term
Definition:The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing three carboxyl (COOH) groups or anions (COO-).
Synonyms:exact_synonym: tricarboxylic acid metabolism



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tricarboxylic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glud1 glutamate dehydrogenase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5499916|PMID:23663782)
UniProt
RGD
PMID:23663782 GO_REF:0000024 MGI:5499916 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957
JBrowse link
G Sirt4 sirtuin 4 involved_in ISO (MGI:5490691|PMID:23562301), (MGI:5499916|PMID:23663782) RGD PMID:23562301 PMID:23663782 MGI:5490691 MGI:5499916 NCBI chr12:41,125,533...41,139,440
Ensembl chr12:41,131,262...41,139,439
JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP tris(2-carboxyethyl)phosphine (TCEP) RGD PMID:10926678 RGD:7243173 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852
JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IDA RGD PMID:8586639 PMID:4062872 RGD:1599287, RGD:2300098 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IDA
IBA
ISO
PMID:21873635
(PMID:7977368)
RGD PMID:7977368 PMID:4062872 PMID:21873635 RGD:2300098, RGD:13792537 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903
JBrowse link
citrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acly ATP citrate lyase involved_in IDA
IEA
ISO
GO_REF:0000107
(PMID:1371749)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:1371749 PMID:18062843 GO_REF:0000002 GO_REF:0000107, RGD:2317315 NCBI chr10:85,412,045...85,464,253
Ensembl chr10:85,412,049...85,463,320
JBrowse link
G Aco1 aconitase 1 involved_in IEA
ISS
ISO
IBA
GO_REF:0000107
GO_REF:0000024
(PMID:1281544), (PMID:16527810), (PMID:8041788)
PMID:21873635
Ensembl
UniProt
RGD
PMID:1281544 PMID:8041788 PMID:16527810 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 5:55,259,841...55,315,872
Ensembl chr 5:55,259,827...55,316,391
JBrowse link
G Aco2 aconitase 2 acts_upstream_of_or_within IDA
ISO
(PMID:9630632) RGD PMID:9630632 PMID:14674759 PMID:9712727 RGD:2306852, RGD:2306877 NCBI chr 7:113,385,677...113,428,794
Ensembl chr 7:113,385,646...113,428,261
JBrowse link
G Cs citrate synthase involved_in IDA
IEA
GO_REF:0000002 InterPro
RGD
PMID:938457 PMID:9712727 PMID:818082 PMID:5820645 GO_REF:0000002, RGD:2306828, RGD:2306877, RGD:2306825, RGD:2306824 NCBI chr 7:758,074...791,421
Ensembl chr 7:758,345...791,421
JBrowse link
G Ireb2 iron responsive element binding protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611
JBrowse link
isocitrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco2 aconitase 2 IDA RGD PMID:14674759 PMID:9712727 RGD:2306852, RGD:2306877 NCBI chr 7:113,385,677...113,428,794
Ensembl chr 7:113,385,646...113,428,261
JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 involved_in IDA
ISO
IBA
ISS
(PMID:10521434), (PMID:19935646), (PMID:20171178)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:10521434 PMID:19935646 PMID:20171178 PMID:17447164 PMID:21873635 GO_REF:0000024, RGD:1624966, RGD:13792537 NCBI chr 9:66,534,146...66,563,703
Ensembl chr 9:66,534,146...66,563,708
JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 involved_in IBA
IEA
ISS
PMID:21873635
GO_REF:0000002
GO_REF:0000024
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025
JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:938457 PMID:21873635 RGD:2306828, RGD:13792537 NCBI chr 8:54,971,694...54,991,085
Ensembl chr 8:54,971,740...54,991,084
JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:938457 PMID:21873635 RGD:2306828, RGD:13792537 NCBI chr 3:117,481,845...117,486,909
Ensembl chr 3:117,481,845...117,486,982
JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in IDA
ISS
ISO
IBA
GO_REF:0000024
(PMID:2605193)
PMID:21873635
UniProt
RGD
PMID:2605193 PMID:938457 PMID:21873635 GO_REF:0000024, RGD:2306828, RGD:13792537 NCBI chr  X:151,515,244...151,524,175
Ensembl chr  X:151,515,247...151,524,171
JBrowse link
G LOC100125384 hypothetical protein LOC100125384 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:100,300,241...100,301,711 JBrowse link

Term paths to the root
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  biological_process 19390
    metabolic process 11736
      cellular metabolic process 10656
        organic acid metabolic process 1008
          oxoacid metabolic process 976
            carboxylic acid metabolic process 957
              tricarboxylic acid metabolic process 16
                5,6,7,8-tetrahydrosarcinapterin metabolic process + 0
                aerobactin metabolic process + 0
                argininosuccinate metabolic process 2
                citrate metabolic process + 5
                coenzyme gamma-F420-2 metabolic process + 0
                isocitrate metabolic process 7
                nicotianamine metabolic process + 0
                nitrilotriacetate metabolic process + 0
                sarcinapterin metabolic process + 0
                tricarboxylic acid biosynthetic process + 0
                tricarboxylic acid catabolic process + 0
paths to the root