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ONTOLOGY REPORT - ANNOTATIONS

Term:tricarboxylic acid metabolic process
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Accession:GO:0072350 term browser browse the term
Definition:The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing three carboxyl (COOH) groups or anions (COO-).
Synonyms:exact_synonym: tricarboxylic acid metabolism


show annotations for term's descendants           Sort by:
tricarboxylic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glud1 glutamate dehydrogenase 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5499916|PMID:23663782)		 UniProt
RGD		 PMID:23663782 GO_REF:0000024 MGI:5499916 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in ISO (PMID:30193097) RGD PMID:30193097 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G Sirt4 sirtuin 4 involved_in ISO (MGI:5490691|PMID:23562301), (MGI:5499916|PMID:23663782) RGD PMID:23562301 PMID:23663782 MGI:5490691 MGI:5499916 NCBI chr12:41,125,533...41,139,440
Ensembl chr12:41,131,262...41,139,439 		JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP tris(2-carboxyethyl)phosphine (TCEP) RGD PMID:10926678 RGD:7243173 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852 		JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IDA RGD PMID:8586639 PMID:4062872 RGD:1599287, RGD:2300098 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662 		JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IDA
IBA
ISO		 PMID:21873635
(PMID:7977368)		 RGD PMID:7977368 PMID:4062872 PMID:21873635 RGD:2300098, RGD:13792537 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903 		JBrowse link
citrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acly ATP citrate lyase involved_in IDA
IEA
ISO		 GO_REF:0000002
(PMID:1371749)
GO_REF:0000107		 InterPro
RGD
Ensembl		 PMID:1371749 PMID:18062843 GO_REF:0000002 GO_REF:0000107, RGD:2317315 NCBI chr10:85,412,045...85,464,253
Ensembl chr10:85,412,049...85,463,320 		JBrowse link
G Aco1 aconitase 1 involved_in IBA
ISO
ISS		 PMID:21873635
(PMID:1281544), (PMID:16527810), (PMID:8041788)
GO_REF:0000024		 RGD
UniProt		 PMID:1281544 PMID:8041788 PMID:16527810 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:55,259,841...55,315,872
Ensembl chr 5:55,259,827...55,316,391 		JBrowse link
G Aco2 aconitase 2 acts_upstream_of_or_within IDA
ISO		 (PMID:9630632) RGD PMID:9630632 PMID:14674759 PMID:9712727 RGD:2306852, RGD:2306877 NCBI chr 7:113,385,677...113,428,794
Ensembl chr 7:113,385,646...113,428,261 		JBrowse link
G Cs citrate synthase involved_in IDA
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:938457 PMID:9712727 PMID:818082 PMID:5820645 GO_REF:0000002, RGD:2306828, RGD:2306877, RGD:2306825, RGD:2306824 NCBI chr 7:758,074...791,421
Ensembl chr 7:758,345...791,421 		JBrowse link
G Ireb2 iron responsive element binding protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611 		JBrowse link
isocitrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco2 aconitase 2 IDA RGD PMID:14674759 PMID:9712727 RGD:2306852, RGD:2306877 NCBI chr 7:113,385,677...113,428,794
Ensembl chr 7:113,385,646...113,428,261 		JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 involved_in IDA
IEA
ISO
ISS		 GO_REF:0000002
(PMID:10521434), (PMID:19935646), (PMID:20171178)
GO_REF:0000024		 InterPro
RGD
UniProt		 PMID:10521434 PMID:19935646 PMID:20171178 PMID:17447164 GO_REF:0000002 GO_REF:0000024, RGD:1624966 NCBI chr 9:66,534,146...66,563,703
Ensembl chr 9:66,534,146...66,563,708 		JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000024 NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025 		JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:938457 PMID:21873635 RGD:2306828, RGD:13792537 NCBI chr 8:54,971,694...54,991,085
Ensembl chr 8:54,971,740...54,991,084 		JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:938457 PMID:21873635 RGD:2306828, RGD:13792537 NCBI chr 3:117,481,845...117,486,909
Ensembl chr 3:117,481,845...117,486,982 		JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in IDA
IBA
ISS
ISO		 PMID:21873635
GO_REF:0000024
(PMID:2605193)		 UniProt
RGD		 PMID:2605193 PMID:938457 PMID:21873635 GO_REF:0000024, RGD:2306828, RGD:13792537 NCBI chr  X:151,515,244...151,524,175
Ensembl chr  X:151,515,247...151,524,171 		JBrowse link
G LOC100125384 hypothetical protein LOC100125384 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:100,300,241...100,301,711 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19738
    metabolic process 12010
      cellular metabolic process 7444
        organic acid metabolic process 1059
          oxoacid metabolic process 1048
            carboxylic acid metabolic process 1033
              tricarboxylic acid metabolic process 17
                5,6,7,8-tetrahydrosarcinapterin metabolic process + 0
                aerobactin metabolic process + 0
                argininosuccinate metabolic process 2
                citrate metabolic process + 5
                coenzyme gamma-F420-2 metabolic process + 0
                isocitrate metabolic process 7
                nicotianamine metabolic process + 0
                nitrilotriacetate metabolic process + 0
                sarcinapterin metabolic process + 0
                tricarboxylic acid biosynthetic process + 0
                tricarboxylic acid catabolic process + 0
paths to the root